1 1 3 bioinformatics in mainland china

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;TOZ (OUOTLUXSGZOIY OT 3GOTRGTJ )NOTG ԗцלґ㔴З ڵ欝▢啻 Liping Wei, Ph.D. Center for Bioinformatics, Peking University

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Bioinformatics in China

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  • ;TOZ (OUOTLUXSGZOIYOT3GOTRGTJ)NOTG

    Liping Wei,Ph.D.

    CenterforBioinformatics,PekingUniversity

  • Copyright PekingUniversity

  • A B C

    D E F

    Copyright PekingUniversity

  • Rapidgrowthsince1990s Drivingforce#1:internet

    1994:fullTCP/IPinternetconnectionbetweenChinaandtherestoftheworldwasestablished.

    A dialupX.25connectionbetweentheInstituteofHighEnergyPhysics(IHEP)inBeijingandtheStanfordLinearAcceleratorCenter(SLAC).

    OnMay17th1994,theofficialconnectiontoFIXWestwasannouncedandtheU.S.basedEnergySciencesNetwork(ESnet)agreedtocarryChinaIPtraffic.

    Copyright PekingUniversity

  • Drivingforce#2:genomics ChinaNationalHumanGenomeCenter(ShanghaiandBeijing),Beijing

    GenomicsInstitute(BGI),BeijingInstituteofGenomics,CAS 1%ofhumangenomesequencing Sequencingofriceandmanyothergenomes

    http://server.chinaunix.net/a2009/1206/820/000000820086.shtmlhttp://en.wikipedia.org/wiki/File:Illumina_Hiseq_2000_sequencers,_BGI_Hong_Kong_sequencing_room.JPG

  • Drivingforce#3:increasedresearchfunding MinistryofScienceandTechnology(MOST): 863and973grants NaturalScienceFoundationofChina(NSFC):younginvestigator

    awardsandresearchgrants

    Copyright PekingUniversity

  • Drivingforce#4:criticalmassofresearchers&students

    Copyright PekingUniversity

  • Pioneersinthelate80sandearly90sName Originalbackground Researchinbioinformatics

    BaiLinHao Theoreticalphysics Phylogenetic analysiswithkstrings

    RunShengChen Biophysics SmallRNAsandnoncodingRNAs

    ChunTingZhang Theoreticalphysics Zscorefor DNAsequenceanalysis

    Yanda Li Automationcontrol Geneexpressionregulation

    YunyuShi Biophysics Structuralbiologyandbioinformatics

    LiaofuLuo Theoretical physics Genomeevolution

    DafuDing Mathematics Proteinstructuremodelinganddesign

    Zhirong Sun Automationcontrol Molecularnetworkandpathwayanalysis

    Luhua Lai Chemistry Dockinganddrugdesign

    Xiaocheng Gu Biophysics Proteinstructure analysis

    Jingchu Luo Biology Planttranscription regulationandevolutionCopyright PekingUniversity

  • CenterforBioinformatics,PekingUniversity Foundedin1997asthefirstbioinformaticscenterinChina AdministrativelylocatedwithintheSchoolofLifeSciences Hasdrylabsandwetlabs. FinanciallysupportedbyMOST,NSFC,andMOE

    Facultymembers:

    LipingWei

    GeGao

    LetianTao

    JianLu

    ChengLi

    ManyuanLong

    JingchuLuo

    HongQu

  • CenterforBioinformatics,PekingUniversity AlsothefirsttoofferPh.D.degreesinbioinformaticsinChina

    Academia71%

    biotech14%

    IT/consultingindustry10%

    Otherindustry5%

    (2006 ~ 2011)

    Copyright PekingUniversity

  • BasedonGoogleMapCopyright PekingUniversity

  • City University/Institute School/Center Degrees

    Beijing PekingUniversity CenterforBioinformatics,SchoolofLifeSciences;CenterforQuantatitiveBiology PhD

    Beijing TsinghuaUniversity DepartmentofBiologicalSciencesandBiotechnology;InstituteofBioinformatics,DepartmentofAutomation

    PhD

    Beijing ChineseAcademyofSciences

    BeijingInstituteofGenomics;CenterofSystemsBiology,InstituteofBiophysics;CenterofMolecularSystemsBiology,InstituteofGeneticsandDevelopmentalBiology

    PhD

    Beijing ChinaAgriculturalUniversity CollegeofBiologicalSciences PhD,Master

    Beijing BeijingNormalUniversity CollegeofLifeSciences,LaboratoryofComputationalMolecularBiology Master

    Chengdu SichuanUniversity SchoolofLifeSciences PhD,Master

    Chongqing ChongqingUniversityofPostsandTelecommunications CollegeofBioinformation Bachelor

    Guangzhou SunYatsenUniversity CenterforBioinformatics,CollegeofLifeSciences PhD,MasterHangzhou ZhejiangUniversity SchoolofLifeScience,InstituteofBioinformatics BachelorHarbin HarbinMedicalUniversity CollegeofBioinformaticsScienceandTechnology Master, Bachelor

    Hefei UniversityofScienceandTechnologyofChina SchoolofLifeSciences PhD,Master

    Kunming YunnanUniversity SchoolofLifeSciences MasterLanzhou LanzhouUniversity SchoolofLifeSciences Master

    BioinformaticsdegreeprogramsinMainlandChina

  • Nanjing NanjingUniversity SchoolofLifeScience PhD,MasterNanjing NanjingAgriculturalUniversity CenterforBioinformatics,CollegeofLifeSciences Master

    Nanjing SoutheastUniversity StateKeyLaboratoryofBioelectronics,SchoolofBiologicalScience&MedicalEngineering PhD,Master

    Nanjing ChinaPharmaceuticalUniversity SchoolofLifeScienceandTechnology PhD,MasterShanghai FudanUniversity SchoolofLifeSciences PhD,Master

    Shanghai ShanghaiInstituteforBiologicalSciences KeyLaboratoryofSystemsBiology PhD

    Shanghai TongjiUniversity SchoolofLifeScience PhD,Master,BS

    Shanghai ShanghaiJiaoTongUniversity DepartmentofBiomedicalEngineering,CollegeofLifeScienceandBiotechnology Master

    Shanghai EastChinaNormalUniversity SchoolofLifeSciences PhD,MasterShanghai ShanghaiJiaoTongUniversity SchoolofLifeSciences MasterTianjin NankaiUniversity CollegeofLifeSciences PhD,MasterTianjin TianjinUniversity TianjinUniversityBioInformatics Centre MasterWuhan HuazhongAgriculturalUniversity SchoolofLifeSciences Master,Bachelor

    Wuhan HuazhongUniversityofScienceandTechnology SchoolofLifeScienceandTechnology PhD,Master,BS

    Xiamen XiamenUniversity DepartmentofChemistry PhD,MasterXi'an Xi'anJiaotongUniversity SchoolofLifeScience,InstituteofBioinformatics PhD,Master

    Yangling NorthwestAgricultureandForestryUniversity CenterforBioinformatics,CollegeofLifeSciences PhD,Master

    Copyright PekingUniversity

  • Bioinformatics:IntroductionandMethods

    Ge Gao &Liping WeiCenterforBioinformatics,PekingUniversity

    https://www.coursera.org/course/pkubioinfo