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Page 1: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

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Bioinformaticsfor Biologists

Page 2: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

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Administrative stuff:Dr. Dan Graur [email protected]

Official TA: Nicholas Price

Unofficial TAs: Yichen Zheng & Wenfu Li

Science and Research Building 2Room 352

Office hours: By email appointment

Page 3: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

All correspondence, appointments, queries, and homework assignments must be emailed to [email protected]

Please do not use any other email address.

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mailto:[email protected]
Page 4: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

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Course website:http://nsm.uh.edu/~dgraur/

http://nsm.uh.edu/~dgraur/
Page 5: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

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Course website:http://nsm.uh.edu/~dgraur/

http://nsm.uh.edu/~dgraur/
Page 6: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

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Textbook (mandatory for every biologist and non-biologist in the world):

Page 7: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

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Textbooks (optional):

etcetera …

Page 8: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

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Syllabus for undergraduates is online

1. Mostly bureaucratese (as dictated by the board of regents)

Syllabus for graduates is online

1. Ditto.

Page 9: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

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Final Grade will be based on

a. Homework assignmentsb1. A scientific project (for undergraduate

students)b2. A “publishable” scientific project (for

graduate students)

Page 10: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

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The room gets very very cold. Please dress properly.

Important information

Page 11: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

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Allergies

=

Page 12: 1 Bioinformatics for Biologists. 2 Administrative stuff: Dr. Dan Graur dgraur@uh.edu Official TA: Nicholas Price Unofficial TAs: Yichen Zheng & Wenfu

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Purpose of the course:


Vol 460 BOOKS & ARTS In Retrospect: Lamarck’s treatise at 200nsmn1.uh.edu/dgraur/ArticlesPDFs/lamarck nature 2009.pdfÉvolutive, Université Lyon 1, 69622 Villeurbanne, France; and

Geodesic Saliency Using Background Priors Yichen Wei, Fang Wen, Wangjiang Zhu, Jian Sun Visual Computing Group Microsoft Research Asia

SmartUnit: Empirical Evaluations for Automated …SmartUnit: Empirical Evaluations for Automated Unit Testing of Embedded Software in Industry Chengyu Zhang, Yichen Yan, Hanru Zhou,

Union Pacific Corporation (UNP) Ilham Bachtiar, Kyle Castner, Michael Haberkorn, Yichen Sun Presented March 31, 2015

ARACHNID. By E. RAY LANKESTER, M.A., F.R.S., …nsmn1.uh.edu/dgraur/popbio/Limulus an Arachnid.pdf504 PROFESSOR E. RAY LANKESTER. LIMTILUS an ARACHNID. By E. RAY LANKESTER, M.A., F.R.S.,

· PDF fileSilk Shop Hotel : Yichen Hotel ... Thus becoming a complex tourism commercial pedestrian street. ... stone branches, stone canals, stone pearls

Zing: Exploiting Program Structure for Model Checking Concurrent Software Tony Andrews Shaz Qadeer Sriram K. Rajamani Jakob Rehof Microsoft Research Yichen

Optical Broadband Angular Selectivityycshen/angularselective/paper.pdf · 2014-03-28 · Optical Broadband Angular Selectivity Yichen Shen, 1† Dexin Ye,3 Ivan Celanovic, Steven

Bacterial type III secretion systems are ancient and ...nsmn1.uh.edu/dgraur/ArticlesPDFs/gophnaetal2003.pdf · Bacterial type III secretion systems are ancient and evolved by multiple

La letteratura cinese contemporanea nelle traduzioni italiane...Shen Congwen (1902-1988) Ba Jin (1904-2005) Lu Wenfu (1927-2005) Wang Meng (1934) Acheng (1949) Su Tong (1963) Zhang

DOI: Biomimetic Collagen Nanofibrous · DOI: 10.1002/adem.200980087 Biomimetic Collagen Nanofibrous Materials for Bone Tissue Engineering** By Wenfu Zheng,Wei Zhang* and Xingyu Jiang

Identifying compositionally homogeneous and nonhomogeneous ...nsmn1.uh.edu/dgraur/pdf/2010_elhaik_graur_josic_landan_nar.pdf · Identifying compositionally homogeneous and nonhomogeneous

Efficient Optimization of Photo Collage - microsoft.com · Efficient Optimization of Photo Collage Yichen Wei Visual Computing Group Microsoft Research Asia [email protected]

Molecular Evolution of Overlapping Genesnsmn1.uh.edu/dgraur/niv/Sabath_PhD_Thesis.pdfgenes were first discovered in viruses (Barrell, Air, and Hutchison 1976) and later in all cellular

Stephen C. Stearns. 1987. Some modest advice for graduate ...nsmn1.uh.edu/dgraur/ArticlesPDFs/ModestAdviceGradStudents.pdf · Write a Proposal and Get It Criticized A research proposal

Face Alignment by Explicit Shape Regression Xudong Cao Yichen Wei Fang Wen Jian Sun Visual Computing Group Microsoft Research Asia

1 Toward Scalable Fully Homomorphic Encryption …1 Toward Scalable Fully Homomorphic Encryption Through Light Trusted Computing Assistance Wenhao Wang, Yichen Jiang, Qintao Shen,

Wysocki’s “On Visual Rhetoric”. Group 6 Jennifer Rios - ODU campus Yichen Zhao - Yavapai Steve Crawford - Germanna

Detection of Explosives Using Image Analysis Krithika Chandrasekar, Devang Parekh, Yichen Lu, Xiaodong Li Shruthi Sanjeevi Reddy, Liqun Yang Purdue University

The Most Dangerous Equation - University of Houstonnsmn1.uh.edu/dgraur/niv/TheMostDangerousEquation.pdf · The Most Dangerous Equation Ignorance of how sample size affects statistical

Parallelism Analysis of Prominent Desktop Applications: An ... · Parallelism Analysis of Prominent Desktop Applications: An 18-Year Perspective Siying Feng, Subhankar Pal, Yichen

Characterization of pairwise and multiple sequence ...nsmn1.uh.edu/dgraur/ArticlesPDFs/landan-graur-gene-2009.pdf · Characterization of pairwise and multiple sequence alignment errors

Mutation and Adaptation: The Directed Mutation Controversy ...nsmn1.uh.edu/dgraur/pdf/sniegowski_lenski_1995.pdfconcerning the relationship between heritable variation and adaptation

Yichen Wei at Microsoft Research

Investigation of Hydrogen Embrittlement of High …€¦ · Investigation of Hydrogen Embrittlement of High Strength Pipeline . Steels under . Typical Service Environment . Yichen

ELG4135-Electronics III Professor: Dr. Riadh Habash Presentation date: Nov 28 th, 2006 Group Members: Yichen Fan Gefei Zhou Zhanglei Song Infrared Entrance

What are the common problems facing Database Security? Presenters: Group 13 Yichen Jiang, Yingxu Liu Ericka Chickowski, “Five Hurdles That Slow Database

An Exploratory Study on the Use of a Phylogenetic …nsmn1.uh.edu/dgraur/ArticlesPDFs/HUCA76YoravDaganGraur.pdfhebrew union college annual volume lxxvi An Exploratory Study on the

Research of Seismic Testing and Dynamic Character … Vol6 No8_part8.pdfResearch of Seismic Testing and Dynamic Character of High-rise Building Structure Based on ANSYS Jing Ji, Wenfu

TING SU, YICHEN YAN, JUE WANG, ZHENDONG SU, arXiv:2008

Draft genome of the globally widespread and invasive ...nsmn1.uh.edu/dgraur/pdf/argentine_ant.pdfDraft genome of the globally widespread and invasive Argentine ant (Linepithema humile)

Controls and Signals Maslab IAP 2011 Ellen Yi Chen [email protected]

1 Tcl/Tk package in R Yichen Qin Department of Applied Mathematics and Statistics December 5, 2008

Kinematic analysis and fault-tolerant trajectory planning ... · trajectory planning of space manipulator under a single joint failure Zonggao Mu1, Liang Han1, Wenfu Xu1*, Bing Li1

SUPPLEMENTARY INFORMATION Human cerebral cortex ... · Human cerebral cortex development from pluripotent stem cells to functional excitatory synapses Yichen Shi1,2, Peter Kirwan1,2,