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A scientific foundation for informed management decisions: Quantifying the abundance, important habitat and cumulative exposure of the Hawaii Island spinner dolphin (Stenella longirostris) stock to human activities This thesis is presented for the degree of Doctor of Philosophy of Murdoch University 2015 Submitted by Julian Ashwell Tyne BSc (Hons.) (Murdoch University, Western Australia)

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Page 1: A scientific foundation for informed management decisions ... · Professor David Johnston critically reviewed the manuscript. Chapter 5 -The importance of spinner dolphin (Stenella

A scientific foundation for informed management decisions:

Quantifying the abundance, important habitat and cumulative

exposure of the Hawaii Island spinner dolphin (Stenella longirostris)

stock to human activities

This thesis is presented for the degree of

Doctor of Philosophy of Murdoch University

2015

Submitted by

Julian Ashwell Tyne

BSc (Hons.) (Murdoch University, Western Australia)

Page 2: A scientific foundation for informed management decisions ... · Professor David Johnston critically reviewed the manuscript. Chapter 5 -The importance of spinner dolphin (Stenella
Page 3: A scientific foundation for informed management decisions ... · Professor David Johnston critically reviewed the manuscript. Chapter 5 -The importance of spinner dolphin (Stenella

I declare that this thesis is my own account of my research and contains its main

content work which has not previously been submitted for a degree at any tertiary

educational institution.

Julian Ashwell Tyne

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Statement on the contribution of others

Supervision

Professor Lars Bejder, Professor Neil Loneragan, Professor Ken Pollock, Associate

Professor David Johnston.

Project Funding

This research was made possible by the financial commitment of the National

Oceanic and Atmospheric Administration (NOAA), The Marine Mammal

Commission, Murdoch University and Dolphin Quest.

Stipend

Australian Post-graduate Award (APA)

Contribution to Chapters

Chapter 2 - The use of area-time closures as a tool to manage cetacean-watch

tourism: Julian Tyne reviewed the literature and wrote manuscript which was

critically reviewed by Professor Neil Loneragan and Professor Lars Bejder.

Chapter 3 - Abundance and survival rates of the Hawaii Island associated spinner

dolphin (Stenella longirostris) stock: Julian Tyne collected and analysed the data and

wrote the manuscript. Professor Kenneth Pollock advised on the analysis. Professor

Lars Bejder, Professor Kenneth Pollock and Associate Professor David Johnston

critically reviewed the manuscript.

Page 5: A scientific foundation for informed management decisions ... · Professor David Johnston critically reviewed the manuscript. Chapter 5 -The importance of spinner dolphin (Stenella

Chapter 4 - Informing monitoring programs to detect trends in abundance of

cetacean populations: a case study focussing on the Hawaii Island spinner dolphin

(Stenella longirostris) stock. Julian Tyne collected and analysed the data and wrote

the manuscript. Professor Kenneth Pollock advised on the analysis. Professor Lars

Bejder, Professor Neil Loneragan, Professor Kenneth Pollock and Associate

Professor David Johnston critically reviewed the manuscript.

Chapter 5 - The importance of spinner dolphin (Stenella longirostris) resting

habitat: Implications for management. Julian Tyne collected and analysed the data

and wrote the manuscript. Robert Rankin helped with the analysis. Professor Lars

Bejder, Professor Neil Loneragan and Associate Professor David Johnston critically

reviewed the manuscript.

Chapter 6 - Cumulative exposure of Hawaiian spinner dolphins (Stenella

longirostris) to human interactions: No rest for the wicked: Julian Tyne collected the

data and analysed the photo id data and wrote the manuscript. Dr Fredrik

Christiansen developed the activity budget models, Heather Heenehan analysed the

acoustic data. Professor Lars Bejder and Professor Neil Loneragan critically

reviewed the manuscript.

Page 6: A scientific foundation for informed management decisions ... · Professor David Johnston critically reviewed the manuscript. Chapter 5 -The importance of spinner dolphin (Stenella

Abstract

Coastal dolphin populations are exposed to non-consumptive human activities that

can pose conservation challenges. Consequently, effective management strategies,

using rigorous scientific assessments of exposed populations, are needed to

mitigate any potential negative impacts of these activities. To inform management

decisions for the conservation of the Hawaii Island spinner dolphin (Stenella

longirostris) stock, I: (i) estimated abundance and survival rates; (ii) measured the

effectiveness of various sampling scenarios to detect changes in abundance; (iii)

identified important spinner dolphin resting habitats; and (iv) measured cumulative

exposure to human activities. Between September 2010 and March 2013, boat-

based and land-based sampling was undertaken to collect dolphin photo-

identification, group behaviour and acoustic data from both inside and outside four

important spinner dolphin resting bays on the Kona Coast of Hawaii Island.

Between years, independent survival rate estimates were similar (0.97 ± 0.05 SE),

and abundance estimates of 631 (95% CI 524-761) and 668 (95% CI 556-801; CV

=0.09) were very consistent. At this precision, and with 95% power and a

monitoring interval of three years, a 5% change in abundance would not be

detected for 12 years. I documented that should resting spinner dolphins be

displaced from resting bays, they are unlikely to engage in rest behaviour

elsewhere. When resting inside bays, dolphins were most likely to rest between

10:00-14:00, and over sandy substrates. Individual spinner dolphins spent between

49.5% and 69.4% of daytime resting (mean = 61.7%). Dolphins were chronically and

repeatedly exposed to human activities during daytime hours (> 82% of time), with

a median duration of only ten min between interactions. The short interval

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between interactions may prevent recovery from disturbance and deprive

individuals of rest and change their sleep state from “deep” to “light”. Rest

deprivation and the disruption of sleep can lead to impaired cognitive abilities and

ultimately effect population viability. These data provide a firm baseline for urgent

consideration by managers to evaluate the risks to the spinner dolphins of Hawaii

Island, potential pathways for mitigating human interactions and ways to measure

the success of management interventions.

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Table of Contents

1 Introduction ............................................................................................. 1

1.1 Objectives of the thesis ................................................................................... 5

2 The use of area-time closures as a tool to manage cetacean-watch tourism .................................................................................................... 7

2.1 Introduction ..................................................................................................... 7

2.2 Benefits of the cetacean watch industry ....................................................... 10

2.3 Costs of the cetacean watch industry ........................................................... 12

2.4 Strategies for managing the cetacean watching industry ............................. 15

2.4.1 Unmanaged and unregulated tourism .......................................................... 18

2.4.2 Guidelines / Codes of conduct ....................................................................... 20

2.4.3 General legislative framework ....................................................................... 22

2.4.4 Permitted / licensed legislation framework ................................................... 25

2.5 Important considerations for implementing time-area management strategies ....................................................................................................... 27

2.5.1 Understanding the cetacean population targeted by the cetacean-watch industry .......................................................................................................... 35

2.5.2 Socio - economic considerations .................................................................... 40

2.5.3 Management considerations ......................................................................... 42

2.6 Summary ........................................................................................................ 43

3 Abundance and survival rates of the Hawaii Island associated spinner dolphin (Stenella longirostris) stock ........................................................ 45

3.1 Abstract .......................................................................................................... 45

3.2 Introduction ................................................................................................... 47

3.3 Materials and methods .................................................................................. 52

3.3.1 Fieldwork ........................................................................................................ 52

3.3.2 Sampling design ............................................................................................. 54

3.3.3 Photographic-identification ........................................................................... 54

3.3.4 Grading and sorting of photo-identification images ..................................... 55

3.3.5 Analyses ......................................................................................................... 56

3.3.6 Estimating abundance and demographic parameters .................................. 57

3.3.7 Estimation of mark rate and total stock size ................................................. 59

3.4 Results ............................................................................................................ 61

3.4.1 Effort and summary statistics ........................................................................ 61

3.4.2 Mark rate of the stock ................................................................................... 63

3.4.3 Apparent survival and total stock abundance ............................................... 64

3.4.4 Discussion....................................................................................................... 66

3.4.5 Management implications ............................................................................. 70

4 Informing monitoring programs to detect trends in abundance of cetacean populations: a case study focussing on the Hawaii Island spinner dolphin (Stenella longirostris) stock. ....................................................... 72

4.1 Abstract .......................................................................................................... 72

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4.2 Introduction ................................................................................................... 73

4.3 Materials and methods .................................................................................. 78

4.3.1 Fieldwork ........................................................................................................ 78

4.3.2 Sampling design ............................................................................................. 80

4.3.3 Sampling effort .............................................................................................. 80

4.4 Analyses ......................................................................................................... 81

4.4.1 Capture-recapture .......................................................................................... 81

4.4.2 Detecting change in abundance .................................................................... 83

4.5 Results ............................................................................................................ 84

4.5.1 Effort and summary statistics ........................................................................ 84

4.5.2 Estimates of apparent survival rate and stock abundance............................ 85

4.5.3 Detecting change in abundance .................................................................... 86

4.6 Discussion....................................................................................................... 91

4.6.1 Estimates of survival rates and abundance ................................................... 91

4.6.2 Monitoring changes in dolphin abundance over time ................................... 92

4.6.3 Applications for monitoring ........................................................................... 93

5 The importance of spinner dolphin (Stenella longirostris) resting habitat: Implications for management ................................................................. 96

5.1 Abstract .......................................................................................................... 96

5.2 Introduction ................................................................................................... 97

5.3 Materials and Methods ................................................................................100

5.3.1 Group focal follows ......................................................................................102

5.3.2 Land-based group focal follows ...................................................................103

5.3.3 Boat-based group focal follows ...................................................................104

5.3.4 Bathymetric and benthic data .....................................................................104

5.3.5 Modelling approach .....................................................................................105

5.3.6 Base-learners ...............................................................................................106

5.4 Results ..........................................................................................................108

5.4.1 Effort and sample sizes ................................................................................108

5.4.2 Boosted GAMs ..............................................................................................111

5.5 Discussion.....................................................................................................117

5.5.1 Management of marine mammals ..............................................................119

5.5.2 Management implications ...........................................................................120

6 Cumulative exposure of Hawaiian spinner dolphins (Stenella longirostris) to human interactions: No rest for the weary........................................ 124

6.1 Abstract ........................................................................................................124

6.2 Introduction .................................................................................................125

6.3 Materials and methods ................................................................................129

6.3.1 Fieldwork ......................................................................................................129

6.3.2 Systematic photo-identification sampling ...................................................132

6.3.3 Group focal follows ......................................................................................132

6.3.4 Passive acoustic recordings ..........................................................................133

6.4 Data analyses ...............................................................................................134

6.4.1 Cumulative activity budgets .........................................................................134

6.4.2 Calculation of dolphin activity budgets for each bay ...................................137

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6.4.3 Factors affecting dolphin activity states ...................................................... 137

6.4.4 Duration of interactions between dolphins and humans ............................ 139

6.4.5 Passive acoustic recordings ......................................................................... 139

6.5 Results .......................................................................................................... 140

6.5.1 Summary of photo-identification and behavioural sampling efforts .......... 140

6.5.2 Bay use by individual dolphins ..................................................................... 142

6.5.3 Passive acoustic monitoring efforts ............................................................. 143

6.5.4 Dolphin activity budgets inside and outside resting bays ........................... 143

6.5.5 Cumulative activity budget for the sampled population ............................. 144

6.5.6 Factors affecting dolphin activity ................................................................ 145

6.5.7 Duration of interactions ............................................................................... 148

6.6 Discussion .................................................................................................... 149

6.6.1 Management implications ........................................................................... 155

7 Conclusions .......................................................................................... 158

7.1 Concluding remarks ..................................................................................... 162

Appendix I: Peer-reviewed publications during candidature ............................... 164

Appendix II: Model selection tables ................................................................... 166

References ........................................................................................................ 167

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List of tables

Table 2-1 The use of permits/licensing, general legislation and guidelines for cetacean-watch tourism in 47 jurisdictions around the world adapted from Carlson (2009). ACCOBAMS = (Agreement on the Conservation of Cetaceans of the Black Sea, Mediterranean Sea and contiguous Atlantic area. ............................................ 17

Table 2-2 :Protected area categories, descriptions and primary objectives as determined by the International Union for the Conservation of Nature (IUCN) (Dudley, 2008) ............................................................................................................ 33

Table 2-3 : Protected areas with cetacean habitat across 18 marine regions, adapted from Hoyt (2011). ....................................................................................................... 34

Table 3-1 Number of photographic identification surveys, hours in each bay, spinner dolphin encounters in four resting bays along the Kona Coast of Hawaii Island from September 2010 to August 2011. .............................................................................. 62

Table 3-2 Highly distinctive (D1) population abundance estimates calculated from open and closed mark recapture models. ................................................................. 65

Table 3-3 Mark rates and abundance estimates from this study and previous studies. ....................................................................................................................... 65

Table 4-1 Apparent survival, abundance, over-dispersion and coefficient of variation calculated for the different sampling scenarios and capture-recapture models. Scenario 1 = 12 days of sampling covering four bays (two days in Makako Bay, four days in Kealakekua Bay, two days in Honaunau Bay and four days in Kauhako Bay), Scenario 2 = six days randomly subsampled from the 12 days covering four bays (one day in Makako Bay, two days in Kealakekua Bay, one day in Honaunau Bay and two days in Kauhako Bay) and Scenario 3 = six days covering two bays (two days in Makako Bay and four days in Kealakekua Bay). SE = standard error, CI = 95% confidence interval, ĉ = over-dispersion. 1estimates from Chapter 3; Tyne et al. (2014) ......................................................................................................................... 86

Table 4-2 Number of annual abundance estimates, effective percentage change, years to detection, total percentage change at detection, at varying degrees of precision, to detect an annual 5% change (decline/increase) in abundance between one, two and three year monitoring intervals based on Scenario 1 = 12 days of sampling covering four bays (two days in Makako Bay, four days in Kealakekua Bay, two days in Honaunau Bay and four days in Kauhako Bay), Scenario 2 = six days randomly subsampled from the 12 days covering four bays (one day in Makako Bay, two days in Kealakekua Bay, one day in Honaunau Bay and two days in Kauhako Bay) and Scenario 3 = six days covering two bays (two days in Makako Bay and four days in Kealakekua Bay). Probability of a Type I Error (α = 0.05) and a Type II Error (1 – β = 0.95 and 1 – β = 0.80). CV = coefficient of variation. ........................................ 90

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Table 5-1 Definitions of spinner dolphin group activities, adapted from Norris et al (1994). ...................................................................................................................... 102

Table 5-2 List of base-learners used in the three Boosted Generalised Additive Models (GAMs) to explore relationships between resting spinner dolphins (resting or non-resting) and environmental, spatial and temporal factors. Single bay models = Kealakekua Bay and Kauhako Bay; coastal model includes all bays and coastal waters. ..................................................................................................................... 107

Table 5-3 Number of focal follows, focal follow hours and mean focal follow duration from land-based and boat-based group focal follows of spinner dolphins inside bays and outside of bays along the Kona Coast, Hawaii Island. ................... 109

Table 5-4 Proportion of substrate types available to spinner dolphins inside and outside of bays within the study area. .................................................................... 109

Table 5-5 The variables selected during the boosted Generalised Additive Modelling process to examine the influence of spatial position, previous behaviour, time-of-day, substrate and inside or outside of bays on the resting state of spinner dolphins. Optimal m is the point at which the model is stopped during the model fitting process to avoid over-fitting. Stability selection shows the probability of variable selection at optimal m. Maximum iterations = 1,000 bootstrap iterations with a 50-fold cross validation. ................................................................................................ 113

Table 6-1 Definitions of spinner dolphin group activities, adapted from Norris et al (1994). ...................................................................................................................... 133

Table 6-2 Number of days, hours and mean length of photo-identification surveys conducted within the four resting bays between September 2010 and August 2012.................................................................................................................................. 140

Table 6-3 Number and duration of dolphin focal follows collected from land-based and boat-based platforms inside bays and outside of resting bays along the Kona Coast, Hawaii Island. ................................................................................................ 141

Table 6-4 Number of days spinner dolphins were present, absent, logger malfunctions and number of recordings in each resting bay from 601 days of passive acoustic recordings in each bay. The acoustic loggers recorded for 30 seconds every four minutes. .................................................................................... 143

Table 6-5 Studies that have quantified exposure rates of dolphins to human activities and whether authors noted or inferred an impact. MV = Motorised Vessels, K = Kayaks, SUP = Stand-Up Paddleboard, S = Swimmers ......................... 151

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List of figures

Figure 2.1: Tour boats and swimmers interact with Hawaiian spinner dolphins in their resting bays off the Kona Coast of the Island of Hawaii. Image taken under permit number GA LOC 15409. .................................................................................. 25

Figure 3.1 Map of the study area illustrating the locations of the four spinner dolphin resting bays, Kauhako Bay, Honaunau Bay, Kealakekua Bay and Makako Bay, along the Kona Coast of Hawaii Island in relation to the other island regions in the Main Hawaiian Islands (inset). ............................................................................. 53

Figure 3.2 Frequency of individual spinner dolphin sightings from September 2010 to August 2011. .......................................................................................................... 62

Figure 3.3 Cumulative discovery curve of highly distinctive (D1) and distinctive (D2) Hawaiian spinner dolphins during 132 photographic identification surveys in the study area (all four bays combined) from September 2010 to August 2011. ........... 63

Figure 3.4 The combination of bays in which individual spinner dolphins have been sighted from September 2010 to August 2011. A = Kauhako Bay, B = Honaunau Bay, C = Kealakekua Bay and D = Makako Bay................................................................... 63

Figure 4.1 Map of the study area illustrating the four spinner dolphin resting bays, Makako Bay, Kealakekua Bay, Honaunau Bay and Kauhako Bay, along the Kona Coast of Hawaii Island. ............................................................................................... 79

Figure 4.2 Cumulative discovery curve of highly distinctive (D1) spinner dolphins during 276 photographic identification sampling days from September 2010 to August 2012. Short vertical lines indicate when 90% and 95% of the highly distinctive individuals had been identified. Long vertical dashed line indicates 12 months of sampling. ................................................................................................... 85

Figure 4.3 Number of annual abundance estimates required to detect various rates of change in stock size at varying levels of precision (coefficient of variation, CV) from three sampling scenarios. Scenario 1 = 12 days of sampling covering four bays (two days in Makako Bay, four days in Kealakekua Bay, two days in Honaunau Bay and four days in Kauhako Bay), Scenario 2 = six days randomly subsampled from the 12 days covering four bays (one day in Makako Bay, two days in Kealakekua Bay, one day in Honaunau Bay and two days in Kauhako Bay) and Scenario 3 = six days covering two bays (two days in Makako Bay and four days in Kealakekua Bay). Type I error (α) probabilities were set at 0.05 and Type II error (β) probabilities were set at power = 1 – β = 0.95 (dark) and 1 – β = 0.80 (grey). .............................................. 87

Figure 4.4 Predicted time it would take to detect an annual change of 5% and 10% with varying levels of precision (coefficient of variation, CV) using monitoring intervals of one year and three years. Type I error (α) probabilities were set at 0.05

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and Type II error (β) probabilities were set at power = 1 – β = 0.80 (grey) and power = 1 – β = 0.95 (dark). .................................................................................................. 88

Figure 5.1 The location of the spinner dolphin study area on the Kona Coast showing the four sheltered bays: Kauhako Bay, Honaunau Bay, Kealakekua Bay and Makako Bay, Hawaii Island and the behavioural observations of spinner dolphin groups (black circles) recorded during boat-based (n=28) and land-based (n=47) group focal follows. Each black circle (n=2,856) corresponds to the location where each ten minute scan sample was obtained. .......................................................... 101

Figure 5.2 The proportion of time spinner dolphins were observed resting, socialising and traveling over available known substrate (aggregate reef, rock/boulder and sand) inside of sheltered bays along the Kona Coast, Hawaii Island. Error bars indicate 95% confidence intervals. ............................................. 110

Figure 5.3 The proportion of time spinner dolphins were observed resting, socialising and traveling over available known substrate (aggregate reef, rock/boulder and sand) outside of sheltered bays along the Kona Coast, Hawaii Island. Error bars indicate 95% confidence intervals. ............................................. 111

Figure 5.4 Marginal function estimate showing the probability of spinner dolphins resting inside and outside of the four sheltered bays (Kauhako Bay, Honaunau Bay, Kealakekua Bay and Makako Bay). Error bars indicate 95% confidence intervals. . 114

Figure 5.5 Time of day (TOD) base learner marginal function estimates showing the predicted probability of spinner dolphins resting (± 95% confidence intervals) during the morning (6am-10am), mid-morning (10am-2pm) and afternoon (2pm-6pm) for Kauhako Bay and Kealakekua Bay. Resting behaviour based on land-based observations. ............................................................................................................ 115

Figure 5.6 Predicted percentages for resting spinner dolphins modelled from Boosted GAMs in (A) Kealakekua Bay (n=1,526); and (A) Kauhako Bay (n=200). Grid cells are 50 m2 based on the resolution of available bathymetric and habitat maps................................................................................................................................... 116

Figure 6.1 Map of the study area illustrating the four spinner dolphin resting bays, Makako Bay, Kealakekua Bay, Honaunau Bay and Kauhako Bay, along the Kona Coast of Hawaii Island. ............................................................................................. 131

Figure 6.2 Integration of three discreet datasets to model the cumulative activity budget of spinner dolphins inside and outside of resting bays along the Kona Coast of Hawaii Island. A) Individual spinner dolphin presence/absence in resting bays from systematic photo id sampling, B) Dolphin group presence/absence in resting bays from 24 hours per day of acoustic monitoring in resting bays and C) Dolphin group behavioural time series from group focal follows inside and outside of resting bays. ......................................................................................................................... 136

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Figure 6.3 Sighting frequencies of 235 photographically-identified spinner dolphins in Makako Bay, Kealakekua Bay, Honaunau Bay and Kauhako Bay between September 2010 and August 2012. ......................................................................... 141

Figure 6.4 Proportion of the 235 identified spinner dolphins were documented in each of the four resting bays. Data from Kealakekua Bay and Kauhako Bay were standardised and error bars are shown. .................................................................. 142

Figure 6.5 Proportion of time spent by spinner dolphins in different activity states inside and outside of four resting bays along the Kona Coast, Hawaii. Error bars represent 95% highest posterior density intervals, analogous to 95% confidence intervals. ................................................................................................................... 144

Figure 6.6 Density distribution of simulated dolphin cumulative activity budget, showing the relative proportion of each activity state (see legend), throughout the study period (Jan 8th 2011 – Aug 30th 2012) for the sample population. ................ 145

Figure 6.7 The probability of spinner dolphins (A) resting, (B) socialising and (C) travelling as a function of time-of-day, estimated from the 428 hours of behavioural focal follow observations. ........................................................................................ 147

Figure 6.8 Frequency histograms of bout durations (continuous time spent in impact or control situations) of control (left column) and impact (right column) situations for dolphins, recorded from boat (top row) and land (bottom row). ..... 149

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Acknowledgements

What a ride! This thesis would not have been possible without the guidance, assistance and input of many people. I am greatly indebted to my supervisors Professor Lars Bejder, Professor Neil Loneragan, Professor Kenneth Pollock and Associate Professor Dave Johnston for their guidance, patience, perseverance and friendship during my PhD candidature. Professor Lars Bejder your support, encouragement and friendship during this journey has motivated me along the way and helped me to get the ‘story line’ right for my manuscripts. The games of dice and the gin & tonics during your visits to the field were also an extremely motivating factor. I thank you for giving me this incredible opportunity. Professor Neil Loneragan I thank you for the whiteboard sessions that helped iron out the creases in developing the manuscripts and chapters for my thesis. Face to face is always the best way to answer questions and formulate ideas. I hope The West Coast Eagles have a good season this year. Professor Kenneth Pollock it was a privilege to work with you, your guidance on the population models and enthusiasm was truly inspiring. I am, however, hoping England win The Ashes! Associate Professor Dave Johnston it has been a pleasure working with you and your knowledge of the spinner dolphin plight in Hawaii has been instrumental during my PhD. Thanks to Rob Rankin for help with the boosted GAMs and Fredrik Christiansen for help with the cumulative activity budget models, and of course the figures. I would like to thank Damien Kenison, Jimmy Medeiros, the communities of Kealakekua, Ho’okena, Honaunau and Kailua Kona, Lisa van Atta, Lance Smith, Jayne LeFors, Jean Higgins and Laura McCue for dialogue and support for my project. Justin Vizbicke, Susan Rickards, Chris Gabriele, Suzanne Yin and Doug Perrine for help and equipment loan in the field, and Keith Unger and McCandless Land and Cattle Co for the use of their land overlooking Kauhako Bay. I would also like to thank the West Hawaii Marine Mammal Response Network for including us in their monthly meetings. A BIG MAHALO NUI LOA to the many research assistants who made the fieldwork so much fun during the long days on the water and at the theodolite stations of Kealakekua and Kauhako Bay. The ‘A’ Team, I am indebted to your dedication in collecting and processing data: Kim New and John Symons for managing a field season each while I was back in Australia, Alexandrea Abe, Destiny Archambault, Audrey Archer, Isabel Baker, Bret Banka, Miriam Battye, Rosie Blackburn, Tasha Boerst, Laura Bray, Amy Brossard, Laura Ceyrac, Sharon Chan, Marie Chapla-Hill,

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Manon Chautard, Laura Cunningham, Alicia Day, Bianca Dekker, Sarah Deventer, Martin Durham, Sophia Gelibter, Bob Gladden, Stacia Goecke, Alison Greggor, Daniella Hanf, Dan Hazel, Heather Heenehan, Merra Howe, Lonneke Ijsseldijk, Rebecca Ingram, Tory Johnson, Shannon Jones, Carissa King, Crystal Kulcsar, Kelsey Lane, Jacqueline Loevenich, Brigid McKenna, Krista Nicholson, Katrina Nikolich, Megan O’Toole, Nicole Penkowski, Stephanie Petrus, Rita Reis, Emily Richardson, Robyn Smith, Kate Sprogis, Ashley Steinkraus, Mariel ten-Doeschate, Megan White, Kaja Wierucka, Virginie Wyss. An especially BIG MAHALO NUI NOA to Bob and Donna Gladden for everything you did for me and my assistants during our time in Kona: for the loan of your boat MALOLO, welcoming us into your home, and keeping us all very well fed with the many meals you cooked for us, for taking us out for dive and snorkel trips during the few days off from collecting data and for all the maintenance help you provided Bob, it was invaluable. To the MUCRU coffee gang Simon Allen, Delphine Chabanne, Krista Nicholson, Alex Brown, Kate Sprogis, Rob Rankin and more recently Fredrik Christiansen. It has been a blast. Our regular, sometimes ridiculous, sometimes ridiculously long, morning coffees have been a great way to start the day. Love to my Mum and Dad, Maureen and John and my Sister Vanessa who have encouraged me from the other side of the world. Finally, but by no means least, to Anita, when I said I wanted to change the direction in my life, you didn’t flinch. You encouraged me to take those first nerve wracking and tentative steps back to school. See what happened! I will be forever grateful for your love and support while following my dream. I cannot put into words how much you mean to me, but I do know that I love you with all my heart and cherish every moment with you.

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Publications

The publications listed below form the basis for the parts of this thesis:

1. Tyne, J.A., Loneragan, N.R. and Bejder, L. (2014). The use of area-time closures

as a tool to manage cetacean-watch tourism. In Whale-watching, sustainable

tourism and ecological management (eds J. Higham, L.Bejder and R. Williams),

pp. 242-260. Cambridge University Press, Cambridge. (Chapter 2)

2. Tyne, J.A., Pollock, K.H., Johnston, D.W. and Bejder, L. (2014). Abundance and

Survival Rates of the Hawaii Island Associated Spinner Dolphin (Stenella

longirostris) Stock. PLoS ONE 9, e86132. (Chapter 3)

3. Tyne, J.A., Johnston, D.W., Loneragan, N.L., Pollock, K.H. and Bejder, L. (in prep).

Informing monitoring programs to detect trends in abundance of cetacean

populations: a case study focussing on the Hawaii Island spinner dolphin

(Stenella longirostris) stock. (Chapter 4)

4. Tyne, J.A., Johnston, D.W., Rankin, R., Loneragan, N.R. and Bejder, L. (2015). The

importance of spinner dolphin (Stenella longirostris) resting habitat:

Implications for management. The Journal of Applied Ecology (Chapter 5)

5. Tyne, J.A., Christiansen, F., Heenehan, H., Johnston, D.W. and Bejder, L (in prep).

Cumulative exposure of Hawaiian spinner dolphins (Stenella longirostris) to

human activities: No rest for the wicked. (Chapter 6).

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1 Introduction

In the early 1980s, cetacean-based tourism experienced unprecedented growth

worldwide (Hoyt, 2001). By the late 1990s, it was a US$1 billion industry, and a

decade later the industry engaged more than 13 million participants in 119

countries, generating over US$2 billion (O'Connor et al., 2009). Despite the

undoubted economic benefits that cetacean-based tourism brings, the

sustainability of the industry has been questioned (e.g. Orams, 1999, Corkeron,

2004, Higham et al., 2014). These concerns were recognised by the International

Whaling Commission, stating that “there is new compelling evidence that the fitness

of individual odontocetes repeatedly exposed to whale watching vessel traffic can

be compromised and that this can lead to population level effects” (IWC, 2006).

Specific concerns over the potential impacts of repeated exposure to tour vessels

relate to: changes to behavioural budgets (Lusseau, 2003a), energetic deficits

(Williams et al., 2006, Christiansen et al., 2014), leading to reduced vigilance for

predators (Johnston, 2014), alteration of social interactions with conspecifics

(Lusseau and Newman, 2004), inadequate recovery from day-time disturbances

(Lusseau, 2004), and displacement from preferred habitat (Bejder et al., 2009) with

an increase in predation risk (Heithaus and Dill, 2002). These types of disturbance

to the behaviour and physiology of cetaceans may affect their vital rates or

reproduction (National Research Council, 2005, Christiansen and Lusseau, 2015)

and lead to long-term consequences for the viability and fitness of individuals and

populations (e.g. Bejder et al., 2006b, Lusseau et al., 2006).

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As a consequence of the cetacean-based tourism boom and the increasing evidence

of its negative impacts, there is a growing need to develop and implement effective

management strategies that ensure tourism activities do not endanger the viability

of cetacean populations (Corkeron, 2006, Higham et al., 2014). However, measuring

the long-term effects of cetacean-based tourism on long-lived animals with low

fecundity in order to provide a sound basis for improved management presents a

significant challenge. Long-term research and monitoring are required in order to

demonstrate causal relationships between exposure to human activities,

behavioural change and biological significant impacts (Bejder and Samuels, 2003).

Legislation to protect marine mammals from human activities was first introduced

in the United States under the Marine Mammal Protection Act 1972 (MMPA, 1972).

However, the MMPA’s fundamental objective is to maintain marine mammal stocks

at their optimum sustainable populations, focusing primarily on preventing

unsustainable takes, harassment and disturbance associated with the commercial

fishing industry (Roman et al., 2013). Despite marine mammals being afforded a

high level of protection from anthropogenic activities under this Act, it remains

unclear how the MMPA applies to cetacean-based tourism. Consequently, there is a

need to introduce or amend legislation to consider policies that effectively protect

cetaceans from takes, harassment and disturbance associated with tourism.

Wildlife management agencies face significant challenges in implementing and

evaluating suitable regimes for cetacean-based tourism, as the growth of the

industry far exceeded our ability to collect appropriate scientific information upon

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which to base management decisions (Higham et al., 2008). The management of

cetacean-based tourism ranges broadly from voluntary codes of conduct and

guidelines, through to strict government legislation (Garrod and Fennell, 2004,

Whitt and Read, 2006, Allen et al., 2007; Chapter 2). Effective, long-term

management strategies are those that monitor tourism operations, establish

thresholds of human-cetacean interactions and respond adaptively to the impacts

of these operations and natural phenomena (Higham et al., 2008). Spatial

management, including the use of protected areas or closures to commercial

operations, can be an effective approach in protecting both terrestrial and marine

ecosystems (Pauly et al., 2002, Hoyt, 2011, Edgar et al., 2014). Protected areas have

been implemented as measures to reduce the risks of overexploitation in marine

ecosystems, especially when scientific knowledge about the ecosystem is lacking

(Hoyt, 2011). Areas have been used and proposed to protect cetacean activities

that are especially vulnerable to human activities, e.g. feeding in southern resident

killer whales; and beach rubbing in northern resident killer whales (Williams et al.,

2009). For protected areas with limited scientific knowledge, the spatial area for

protection might be increased as a precaution to account for the uncertainty of

available information. Spatial management has been used to conserve biodiversity,

and delineate areas for specific use to mitigate anthropogenic threats, enhance

productivity and provide public focus for marine conservation (Chapter 2). There is

also emerging evidence that protected areas can be effective for cetaceans

(Gormley et al., 2012). In addition to spatial management, temporal closures can be

introduced to limit human access to cetaceans during specific times that are critical

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to targeted animals/populations (Notarbartolo di Sciara et al., 2008, Constantine et

al., 2004).

Many cetacean populations exhibit specialized behavioural routines that are

temporally partitioned. Some baleen whales migrate vast distances on an annual

basis for the purposes of feeding at high latitudes and breeding at low latitudes

(e.g. Clapham, 2000). Hawaiian spinner dolphins (Stenella longirostris), on the other

hand, have evolved a daily behavioural pattern involving foraging cooperatively in

deep water during the night and gathering in sheltered bays to socialize and rest

during the day (Norris et al., 1994, Benoit-Bird and Au, 2009). They form island-

associated stocks with unique behavioural features (Norris et al., 1994, Benoit-Bird

and Au, 2009). This specialized behavioural ecology may render Hawaiian spinner

dolphins particularly vulnerable to anthropogenic disturbance. The bays in which

they rest are also the locations of on-water human activities, exposing spinner

dolphins to a range of human operations: recreational and commercial boating,

swimmers and kayakers (Courbis and Timmel, 2009, Delfour, 2007). Furthermore,

genetic analyses have revealed that Hawaiian spinner dolphins are distinct from

populations found elsewhere (Andrews, 2009), and that sub-populations within the

Hawaiian archipelago are genetically distinct from each other (Andrews et al.,

2010).

In recognition of the sub-population structuring of Hawaiian spinner dolphins, the

National Oceanic and Atmospheric Administration’s (NOAA) National Marine

Fisheries Service (NMFS) divided them into five different island/island-group

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management units under two broad geographical regions: three units in the Main

Hawaiian Islands (Hawaii Island, Oahu/4-Islands (Maui, Moloka’i, Lana’i and

Kaho’olawe) area, Kauai/Niihau); and two units in the North-Western Hawaiian

Islands (Pearl & Hermes Reef and Kure/Midway Atolls). The MMPA mandates that

each management unit be assessed regularly by NMFS. In 2005, NOAA published an

Advanced Notice of Proposed Rulemaking about the concerns surrounding human-

spinner dolphin interactions and to solicit feedback on potential options for future

regulations under the MMPA (NOAA, 2005). In addition, NOAA initiated a research

program to investigate the scale of the effects and possible ways to mitigate

potential negative impacts of human interactions. This thesis forms part of an

initiative to assess the abundance and survival rates of the spinner dolphin stock

and to help inform an effective management strategy for spinner dolphin-based

tourism.

1.1 Objectives of the thesis

An assessment of the baseline characteristics of the dolphin stock is integral to the

development of an effective management strategy for ensuring its long-term

viability, particularly in the face of intensive anthropogenic activities, including

nature-based tourism. This assessment should include an estimation of the dolphin

stock abundance and survival rates in order to provide a benchmark from which

alternative management strategies can be implemented and evaluated. The paucity

of knowledge on the abundance, demographic parameters, habitat use and

cumulative exposure rates of the Hawaii Island spinner dolphin stock to human

activities was used to frame the specific objectives of my thesis, which are to:

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1. Review the use of time-area closures as a tool to manage cetacean-watch

tourism (Chapter 2);

2. Develop a rigorous and systematic photo-identification sampling regime used in

combination with capture-recapture models to estimate the survival,

abundance and movement rates of the Hawaii Island spinner dolphin stock

(Chapter 3);

3. Estimate the power of various sampling regimes to detect trends in spinner

dolphin abundance, ultimately to inform management about options for

developing an effective monitoring program (Chapter 4);

4. Identify habitat features that contribute to the occurrence of resting behaviour

in spinner dolphins by linking behaviour and habitat features using gradient

boosted Generalised Additive Models (Chapter 5);

5. Determine the cumulative exposure of spinner dolphins to human activities by

integrating a suite of sampling regimes, including boat-based photo-

identification, boat- and land-based focal group follows and passive acoustic

monitoring (Chapter 6); and

6. Develop recommendations for mitigating possible impacts of human-spinner

dolphin interactions and for monitoring the efficacy of mitigation strategies

proposed by NOAA (Chapter 7).

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2 The use of area-time closures as a tool to manage cetacean-watch tourism

2.1 Introduction

The world’s oceans have been exploited for their resources for generations. In

some cases, this has led to the removal of top predators from ecosystems resulting

in a cascading effect through trophic levels altering the ecosystem and restructuring

the food web, referred to as fishing down the food web (Pauly et al., 2002, Myers

and Worm, 2003, Ferretti et al., 2010). Cetaceans (whales, dolphins and porpoises)

have been targeted for their oils and meats, and with advances in technology and

methods of hunting, some populations were driven perilously close to extinction.

Fortunately, attitudes towards the harvesting of cetaceans have changed (Bearzi et

al., 2010), and rather than harvest cetaceans for their products, it is now more

desirable to observe them in their natural environment.

Today, cetaceans are the embodiment of marine conservation efforts. The USA was

the first country to introduce legislation to protect marine mammals through the

Marine Mammal Protection Act 1972 (MMPA). The MMPA was designed to

minimise the capture or ‘take’, harassment and disturbance of marine mammals,

primarily from fishing operations as by-catch and from cetacean hunting. The

MMPA defines the term ‘take’ as “hunting, killing, capture and harassment of a

marine mammal or the attempt thereof”. Since the declaration of the MMPA, other

countries have adopted their own legislation similar to the MMPA, e.g., The Marine

Mammals Protection Act 1978 in New Zealand and the Environment Protection and

Biodiversity Conservation Act 1999 in Australia.

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Although the protection of cetaceans is supported enthusiastically in many

countries around the world, only 1% of the worlds oceans are protected (Hoyt,

2005), and cetacean populations and their habitats are still vulnerable to a

multitude of anthropogenic impacts. These threats can be categorised into two

broad groups: direct threats (i.e., those that are immediate and readily observable)

and cumulative impacts (i.e., those that are not readily observable and likely to

cause effects through repeated exposure). Direct threats are those that cause the

death of individuals immediately, such as whaling (Gales et al., 2005), ship strikes

(Panigada et al., 2006) and bycatch (Mangel et al., 2010). Although the deaths of

individual cetaceans are readily detected, quantifying the effects of direct impacts

on cetacean populations and their future viability is difficult as it requires

information on the population size and the connectivity of populations. For

example, the question of whether the annual loss of 20 dolphins through bycatch

from a trawl fishery is likely to cause a significant decline in the population is not

easily answered without information on population size and its connectivity to

other populations. Cumulative effects, or indirect impacts, include sources of

disturbance that are likely to affect the behaviour and/or physiology of cetaceans

and as a consequence, are more difficult to identify and quantify. Indirect effects

include noise pollution (Nowacek et al., 2007, Tyack, 2008), chemical pollution

(Reijnders et al., 2009), tourism (Lusseau and Higham, 2004, Lusseau et al., 2006,

Bejder et al., 2006b), coastal development (Chilvers et al., 2005, Jefferson et al.,

2009), prey exploitation (Bearzi et al., 2006), oil and gas exploration (Harwood and

Wilson, 2001), shipping (Clark et al., 2009), aquaculture (Watson-Capps and Mann,

2005) and climate change (Alter et al., 2010).

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Ironically, cetacean-watch tourism operations, most of which are promoted as

beneficial, can cause significant impacts to cetaceans if not managed appropriately.

Specifically, dolphin-watching can cause biologically significant impacts on exposed

communities by causing habitat displacement and reducing the reproductive

success of individuals exposed to this form of “eco-tourism” (Lusseau, 2005, Bejder

et al., 2006b, Bejder et al., 2006a). The Whale Watching sub-committee of the

International Whaling Commission has noted that cetacean populations targeted by

tourism operations can be divided into four broad categories based: 1) resident

populations where breeding, nursing, and feeding occur in the same area; 2)

cetaceans on their breeding grounds; 3) cetaceans on their feeding grounds; and 4)

cetaceans on their migratory corridors (IWC, 2006). It is important to note that each

category is likely to require different levels and types of protection, e.g. potentially,

it is more important to protect cetaceans on their breeding grounds than on their

migratory corridor. In addition, cetacean-watch tourism around the world exists

within varying social, cultural, economic, political and environments (Higham et al.,

2008). These aspects require careful consideration when developing an effective

management framework, as each situation is unique, i.e. there is no “one size fits

all” or “magic bullet” solution. As a consequence, management frameworks for

cetacean-watch operations must be designed based on the overall context in which

the cetacean-watch operation takes place in relation to the target cetacean

population. This raises the question of which approach(es) is/are the most

appropriate to protect cetacean populations against impact(s) from tourism

operations?

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In this chapter I discuss area-time closures as a management option to mitigate

threats to cetaceans from commercial cetacean-watch tourism. I begin by

evaluating the benefits and potential threats of the cetacean-watch industry; and

discuss the variety of legislation available and its effectiveness. Subsequently, I

discuss the development of area-time closures as part of management frameworks

to help mitigate threats to cetacean populations, and lastly I discuss important

issues that need to be considered when developing area-time closures.

2.2 Benefits of the cetacean watch industry

Cetacean-watch tourism has the potential to contribute to economic growth,

education, conservation and the collection of scientific data. Cetacean-watch

tourism is a rapidly-growing industry. In 1998, it was a US $1 billion industry (Hoyt,

2001), which by 2009, it had doubled to approximately 13 million tourists paying to

observe cetaceans in their natural environment, generating an annual turnover of

more than US $2 billion and estimated to employ 13,000 people in coastal

communities around the world (Cisneros-Montemayor et al., 2010, O'Connor et al.,

2009). If cetacean-watch operations start in countries where currently they are not

operating, employment is predicted to increase to more than 19,000 people, and

that the total annual revenue will increase to US $2.5 billion (Cisneros-Montemayor

et al., 2010). As a consequence of this rapid growth, coastal communities where

cetacean-watch tourism is practiced are highly dependent on the income generated

by local cetacean-watch operations. For example, in Kaikoura, New Zealand, the

local community resurrected their ailing economy by developing commercial whale-

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watch operations (Hoyt, 2007). Before whale-watching, approximately 3,400

tourists visited Kaikoura annually, which increased to 80,000, seven years after the

development of commercial whale-watching in 1986 and after 12 years, had

increased more than ten-fold, to an estimated 873,000 visitors annually (Hoyt,

2007). Cetacean-watch operations provide an ideal platform from which to educate

and raise awareness of the biology and environment of the target cetacean

populations, the threats to their population and efforts to conserve the population.

Many cetacean-watch operations include an educational and interpretive

component during their tour (Lück, 2003). Provided with accurate scientific

information, trained tour guides can play a critical role in informing the public about

local cetacean populations, and raising their awareness of the environmental and

the conservation measures being implemented to conserve the population.

Properly developed education programs can be effective in managing tourist

interactions with free-ranging animals in their natural environment (Orams, 1997).

Furthermore, some argue that cetacean-watching experiences can lead to

behavioural changes in the tourists by encouraging a more environmentally aware

behaviour (Orams, 1997, Ballantyne et al., 2010).

Commercial cetacean-watch operations also provide a platform for scientific

research (Bejder and Samuels, 2003). Using a tour-vessel for research may,

however, restrict the appropriate behavioural sampling methods and the type of

abundance, distribution and behavioural data that can be reliably collected and

interpreted reliably. However, vessels used in the cetacean-watch industry provide

frequent and relatively inexpensive access to cetaceans, and the ability to obtain

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many observations of cetacean-tourist interactions. For example, commercial tour

vessels were used to good effect to study commercial swim-with-dolphin

operations (Constantine, 2001), and in controlled approach experiments, combined

with observations made from a land-based theodolite, to record the behaviours of

the target cetaceans when approached by the cetacean-watch vessel (Williams and

Ashe, 2007). In addition, the presence of researchers on a cetacean-watch vessel

allows accurate and up-to-date knowledge to be communicated to tourists, and

social science researchers can also obtain data on the cetacean-watching

experience and tourist expectations.

2.3 Costs of the cetacean watch industry

Cetacean-watch tourism, by its very nature, repeatedly seeks out prolonged close-

up encounters with specific communities of wild cetaceans. The cumulative impacts

of repeated encounters have the potential to cause significant biological effects on

the population. Possible effects must be evaluated with any changes in the

cetacean populations due to natural phenomena (Lusseau and Higham, 2004), and

as a consequence, evaluating whether cetacean-watch operations are having a

biologically significant effect on target cetacean populations is challenging.

The National Research Council (2005), developed the Potential Consequences of

Acoustic Disturbance (PCAD) model for cetaceans. This model incorporates five

groups of variables with observable features: sound, behaviour change, life

functions, vital rates, and population effect. The conceptual model identifies sound

characteristics that may cause a disturbance with a resulting behavioural change

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(e.g. the sound may cause a change in dive behaviour or movement). It then links

how behavioural changes can cause alterations to life functions (e.g. feeding,

breeding) which can then cause changes to vital rates (e.g. survival, reproduction)

and finally, how changes to vital rates can translate into population effects (e.g.

population growth rate). Although this model was developed specifically for

acoustic disturbance, the framework can be incorporated in the evaluation of any

potential impact on cetacean populations. For example, repeated disruption to

resting spinner dolphins by cetacean-watch operations (i.e. tourism replacing the

disturbance by sound) could result in a behavioural change from resting to

socialising, which reduces the resting behavioural budget (life function effected),

which in turn reduces the energy for reproduction (vital rate), which could reduce

the population growth rate (population effects). The manifestation of repeated

behavioural disruptions, mediated through cetacean-watch vessel disturbance, may

cause long term biologically significant effects on cetacean populations.

The behavioural responses of cetaceans to vessels vary greatly, ranging from

approaching and bow-riding to complete avoidance. A number of studies have

demonstrated behavioural changes in cetacean populations as a consequence of

vessel-cetacean interactions. For example, northern resident killer whales (Orcinus

orca) on the Pacific coast of Canada change their swimming path from one of a

convoluted pattern to that of a more direct path, with an increase in the number of

approaching whale-watching vessels (Williams and Ashe, 2007). In New Zealand,

the resting behaviour of bottlenose dolphins decreased as the number of boats

increased in the Bay of Islands (Constantine et al., 2004) and in Milford Sound

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(Lusseau et al., 2006). In Hauraki Gulf, New Zealand the presence of tour boats

reduced the likelihood that common dolphins (Delphinus sp.), would continue

foraging (Stockin et al., 2008). In Shark Bay, Western Australia, long-term exposure

to dolphin-watch vessels has caused long-term, biologically significant effects on

the reproductive success and declines in relative abundance of bottlenose dolphins

in an area where boat-based tourism occurred (Bejder et al., 2006b).

Anthropogenic noise in the marine environment also affects the quality of cetacean

habitat (Tyack, 2008). Noise pollution has the potential to impact cetaceans as they

rely on their auditory capabilities as a primary means of communication, foraging

and sensing their marine environment. Man-made noise, such as that generated by

motorboat engines or sonar, can interfere with cetacean acoustic systems and

impair their communication, thereby diminishing their ability to detect natural

sounds, including sounds generated by conspecifics (Tyack, 2008, Nowacek et al.,

2007). This acoustic interference, referred to as acoustic masking (Clark et al., 2009,

Jensen et al., 2009), may make cetaceans vulnerable to predation, limit their ability

to catch prey, and affect their navigation and communication, which may, in turn,

have long term biologically significant effects on the population. Noise levels from

small vessels mask the acoustic communications in bottlenose dolphins (Tursiops

sp.) and short-finned pilot whales (Globicephala macroryhnchus) (Jensen et al.,

2009). Furthermore, avoiding sonar frequencies leads to disruption of swim path,

navigation and usual response to detection of shallow waters (Zimmer and Tyack,

2007). However, at present, insufficient data are available to evaluate the long term

effects of anthropogenic acoustic pollution on cetacean populations (National

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Research Council, 2005). Thus, the long term monitoring of cetacean behaviour in

response to acoustic pollution is important for predicting the effects of this type of

impact on the population.

Some tour operators offer swim-with cetacean activities (Kessler and Harcourt,

2010, Courbis, 2007, Constantine, 2001, Samuels and Spradlin, 1995, Bejder et al.,

1999), an increasingly popular activity for tourists (Hoyt, 2007). The methods used

to place swim-with customers in the path of a group of wild cetaceans alters their

long-term behaviour (Constantine, 2001); e.g. the magnitude of avoidance response

of dolphins to swimmers in the Bay of Islands, New Zealand, increased over time

and the tour operator’s success with swim-with attempts decreased over an three

year period (Constantine, 2001). It has not been possible to evaluate whether these

behavioural changes have had long-term biologically significant impacts on the

population. This highlights the importance of long-term studies on cetacean

populations exposed to commercial tourism activities, to evaluate their effects on

the population and developing appropriate management strategies for conserving

the population.

2.4 Strategies for managing the cetacean watching industry

The approaches used to manage commercial cetacean-watch operations vary

around the world. Due to the rapid growth of the industry (Garrod and Fennell,

2004, Hoyt, 2001), planning and management agencies face significant challenges in

developing and evaluating management priorities to match this growth (Higham et

al., 2008). The fast growth of the industry has also limited the amount of scientific

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information available to support management decisions, and to evaluate the

potential consequences of alternative management options (Higham et al., 2008).

However, a number of cetacean-watch management frameworks have been

implemented to mitigate the impacts of commercial cetacean-watch tour

operations. These frameworks range from voluntary codes of conduct and

guidelines to government legislation (Table 2-1). Carlson (2009) reviewed the

cetacean-watching regulations of 47 jurisdictions around the world. Although all

these jurisdictions had some form of guidelines or codes of conduct, only six

countries had legislation for the general protection of cetaceans, but not specifically

directed to the cetacean-watch industry, and 13 countries had legislation that

required operators to have permits or licenses to carry out cetacean-watch

activities in some region(s) (Table 2-1). The effectiveness of different frameworks

such as unmanaged and unregulated cetacean-watch operations, codes of conduct,

guidelines, general legislation (where cetacean protection is in place but not

specific for the cetacean-watch industry) and permitting strategies, for mitigating

any effects on cetaceans from cetacean-watch operations varies considerably.

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Table 2-1 The use of permits/licensing, general legislation and guidelines for cetacean-watch tourism in 47 jurisdictions around the world adapted from Carlson (2009). ACCOBAMS = (Agreement on the Conservation of Cetaceans of the Black Sea, Mediterranean Sea and contiguous Atlantic area.

Jurisdiction Permit / Licensed

Legislation

General regulations for the

protection of cetaceans

Guidelines

ACCOBAMS x Antarctica x Argentina x x Australia x x Azores x x Bahamas x Brazil x x British Virgin Islands x Canada x x Canary Islands x x Chile x x Colombia x Dominica x x Dominican Republic x Ecuador x x France x Galapagos x Guadeloupe x Hong Kong x Iceland x Indonesia x Ireland x Japan x Madagascar x Mauritius x Mexico x x Mozambique x New Caledonia x x Newfoundland and Labrador

x

New Zealand x x Niue x x Norway x Oman x Pacific Islands Region x x Philippines x Puerto Rico x x South Africa x x St Lucia x x

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Tanzania x Tonga x Turks and Cacos x United Kingdom x x United States x x Uruguay x

Number 47 13 6 47

2.4.1 Unmanaged and unregulated tourism

Recently, the growth in nature-based tourism is to shifting from the industrialized

nations (Pergams and Zaradic, 2008) to developing countries (Balmford et al.,

2009). This shift has implications for both the wildlife tourism industry and nature

conservation in developing countries, where typically, little or no legislation is in

place to manage these operations. As ecologically sensitive areas and vulnerable

wildlife populations are targeted by tourism operations, these populations may be

disturbed or even become extinct. For example, in India, new facilities to house the

increasing number of tourists have been constructed in ecologically sensitive areas

and migration corridors for wildlife (Karanth and DeFries, 2011). Although nature-

based tourism is increasing, if the focal species that draws the tourists to a local

area becomes extinct, then tourist numbers will also decrease in that area (Karanth

and DeFries, 2011). In 2005, tigers (Panthera tigris) became locally extinct in

Sariska, India, and the annual visitor growth rate decreased by 3% (Karanth and

DeFries, 2011). Could the same scenarios exist for cetaceans?

Possibly, as a consequence of the rapid increase in commercial cetacean-watch

operations, and the inability of management agencies to keep pace with this

expansion, most operations are still unregulated. These unregulated, commercial

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operations raise concerns for the populations of cetaceans they target. For

example, in New Caledonia in the South Pacific, one of the smallest populations of

humpback whales (Megaptera novaeangliae) (< 500 individuals) are known to

migrate from Antarctica to breed in this region (Schaffar et al., 2010). During the

breeding season, this population is the focus of local daily cetacean-watch

operations, and is exposed to more tour vessel activity, for prolonged periods of

time, than populations in areas where legislation exists (Schaffar et al., 2010). Self-

imposed voluntary guidelines introduced to manage cetacean-watch operations

proved ineffective (Schaffar et al., 2010), and in 2009, New Caledonia introduced

new legislation to prevent the intentional disturbance of the local cetacean

populations (Carlson, 2009).

In the 1990s, unmanaged and unregulated cetacean-watch tourism was initiated in

two areas of habitat for the Irrawaddy dolphin (Orcaella brevirostris) in the Mekong

River, Cambodia (Beasley et al., 2010). This population is classified by the IUCN as

critically endangered (Beasley et al., 2010). A co-operative project was developed in

the region, so that the local stakeholders would share revenue, manage the local

industry and provide visitor satisfaction. The success of this project was short-lived,

however, as it was de-railed by government interference to instigate a significant

increase in the number of cetacean-watch vessels conducting tours (Beasley et al.,

2010). In this case, political priorities disrupted a program aimed at developing a

sustainable industry and lead to a decline in the population and loss of tourism. This

example highlights the conflict between conservation and development priorities in

many countries, and that typically, conservation priorities are low on the political

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20

agenda. Cetacean-watch tourism in Lovina, North Bali, Indonesia, developed from

local artisanal fishers in the 1980s. Between 35 to 100 tour boats operate daily from

Lovina, targeting mainly the local population of dwarf spinner dolphins (Stenella

longirostris roseiventris) (Mustika et al., 2011). Where the practices of the tourism

industry is unregulated, up to 83 vessels have been observed surrounding a group

of dolphins, vessels were driven erratically, and vessel captains attempted to

encroach within the recommended minimum approach distance of 50 m (Mustika

et al., 2011). Similarly, other charismatic megafauna such as the whale shark,

(Rhincodon typus), have been targeted by tour operators, and in areas with no

legislation, boat strikes and boat crowding have been observed on and around

whale sharks (Quiros, 2007). These examples provide strong support for the need,

to develop legislation, education programs and incentives to mitigate the negative

impact, and potential biologically significant effects to focal wildlife from nature-

based tourism.

2.4.2 Guidelines / Codes of conduct

Few countries around the world have implemented legislation to protect cetaceans

from the effects of human disturbance and fewer countries have legislation that

specifically addresses commercial cetacean-watch tourism. However, in an attempt

to offer some protection to cetacean populations, numerous self-imposed

voluntary codes of conduct and guidelines have been developed for commercial

cetacean-watch operators (Garrod and Fennell, 2004). In the absence of specific

government legislation focussing on cetacean-watching, codes of conduct and

guidelines consisting of agreements between parties who undertake cetacean-

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21

watch activities, have been developed to mitigate potential impacts on the target

cetacean population. However, guidelines and codes of conduct lack legislative

power and legally binding rules. In general, adherence to codes of conduct are

based on ethical obligation and peer pressure (Garrod and Fennell, 2004), which are

often ineffective in reducing impacts on cetaceans. For example, in Hawaii,

commercial cetacean-watch operators have been observed to flout voluntary

guidelines, by steering bow riding spinner dolphins (Stenella longirostris) directly to

clients in the water (Wiener et al., 2009). In Zanzibar, Tanzania, the guidelines for

dolphin-watching are violated as the numbers of cetacean-watch tourist vessels

have increased and this is having a detrimental effect on a local population of

bottlenose dolphins (Christiansen et al., 2010).

In Port Stephens New South Wales, Australia, a variety of legislative measures were

adopted after the voluntary code of conduct failed to adequately reduce the

impacts of tourism activities on the local cetacean population (see Allen et al.,

2007). However, the New South Wales government introduced an amendment to

their National Parks and Wildlife Regulation to include marine mammals, and that

adopted all the aspects of the national guidelines as part of the regulations. Port

Stephens was also declared a Marine Protected Area (MPA), the Great Lakes

Marine Park, to protect the diversity of the region. The inclusion of different zoning

areas within this MPA may have a positive effect on the local dolphin population, as

it may help protect their natural habitat, and any commercial operation that wishes

to undertake dolphin-watching tours in the MPA must obtain a license from the

management agency. These amendments to the regulations have provided a

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22

mechanism that allows most stipulations within the formally voluntary code of

conduct, to be enforced (Allen et al., 2007). In addition dolphins, in the MPA could

be further protected from cetacean-watch operations by the implementation of

spatial and temporal dolphin watching zones (Allen et al., 2007). It is all well and

good implementing different zoning areas within the MPA, but it is vitally important

that the efficacy of these zones in mitigating disturbance to the local population of

cetaceans is determined by continuous monitoring. For example, in the Great Lakes

Marine Park, speed restrictions zones were introduced as a mitigation measure to

minimise boat impacts on the local cetacean population. However, research has

identified these speed restriction zones to be ineffective in minimising boat impacts

on the local cetacean groups that included calves, and a revision on the placement

of these zones was recommended (Steckenreuter et al., 2012). This measure

highlights the importance of continuously monitoring the performance of a

mitigation approach that attempts to minimise impacts on cetacean populations

from tourism. As a consequence, the management agency must be able to react

quickly and adapt the existing management framework accordingly, an option that

would have been unavailable without a legislative framework in place.

2.4.3 General legislative framework

Under general legislative frameworks, legislation is often developed such that any

activity that has the potential to be detrimental to a cetacean, can be prosecuted

by law. However, these general legislative frameworks aren’t specific to the

cetacean-watch industry. The US Marine Mammal Protection Act (MMPA) was

designed to minimise harassment and disturbance to marine mammals, primarily

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for takes from commercial fishing operations as by-catch and from cetacean

hunting. The MMPA defines the term ‘take’ as hunting, killing, capture and

harassment of a marine mammal or the attempt thereof. However, the

interpretation of ‘harassment’ in the MMPA has become a grey area in this

legislative framework and it is not clear how activities on behalf of the cetacean-

watchers fall within this Act. Under this Act, harassment is defined as follows “The

term ‘harassment’ means any act of pursuit, torment, or annoyance which (i) has

the potential to injure a marine mammal or marine mammal stock in the wild; or (ii)

has the potential to disturb a marine mammal or marine mammal stock in the wild

by causing disruption of behavioral patterns, including, but not limited to,

migration, breathing, nursing, breeding, feeding, or sheltering.” This leads to

confusion and difficulty in determining when cetacean-watch activities are deemed

to be harassing a cetacean(s). Under these circumstances, voluntary codes of

conduct and voluntary guidelines are often agreed upon and implemented to help

mitigate impacts alongside the general legislative framework. For example, these

instruments have been developed for the local Hawaiian spinner dolphin

population on the island of Hawaii that is protected under the MMPA. In addition to

the general protection legislation and codes and guidelines, specific legislation is

being considered to further limit impacts.

Due to growing concerns about the potential impact of cetacean-watch operations

on the Hawaiian spinner dolphin (Figure 2.1), the National Oceanic and

Atmospheric Administration’s Fisheries Service (NOAA Fisheries) Pacific Islands

Regional Office (PIRO), in conjunction with the Pacific Islands Fisheries Science

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Centre (PIFSC), is developing a legislative framework to reduce the exposure of

resting spinner dolphins to human activity in Hawaiian waters. Hawaiian spinner

dolphins display a rigid diurnal behavioural pattern. At night they venture off shore

to feed on shrimp, squid and fish that migrate towards the surface from the

mesopelagic zone (Beniot-Bird and Au, 2003). During the day the spinner dolphins

move into coastal areas to socialise and rest. These resting areas are usually

sheltered, shallow (< 50 m) and have sandy bottoms (Norris and Dohl, 1980, Norris

et al., 1994). The rigid behavioural and movement pattern of Hawaiian spinner

dolphins and their day-time reliance on sheltered bays to rest and socialize, coupled

with the ease of human accessibility to dolphins in these same habitats, is likely to

render them more exposed and more susceptible to human disturbance than other

dolphin species. At present, it is unclear how these interactions may affect spinner

dolphins. Recent studies suggest that the resting periods for the Hawaiian spinner

dolphin may be interrupted or truncated by exposure to human activity, although

no clear conclusions regarding possible biological significant effects have been

researched (Courbis and Timmel, 2009, Danil et al., 2005, Delfour, 2007, Courbis,

2007). Furthermore, research has documented that the genetic diversity of the

Hawaiian spinner dolphin is low (Andrews et al., 2010). Studies of the genetic

structure of spinner dolphins along the Kona Coast of the island of Hawaii, which is

the target for large scale cetacean-watch operations, show that this population is

genetically distinct from all other spinner dolphin populations in the Hawaiian

Archipelago (Andrews et al., 2010). As a consequence, this population may be one

of the most vulnerable Hawaiian spinner dolphin populations to anthropogenic

disturbance. Thus, developing a legislative framework specifically for the protection

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of Hawaiian spinner dolphins from cetacean-watch operations is a necessity for the

long-term sustainability of both the local spinner dolphin population and the local

cetacean-watch tourism industry that relies on this dolphin population.

Figure 2.1: Tour boats and swimmers interact with Hawaiian spinner dolphins in their resting bays off the Kona Coast of the Island of Hawaii. Image taken under permit number GA LOC 15409.

2.4.4 Permitted / licensed legislation framework

Management frameworks exist where a legislative system requires commercial

cetacean-watch operators to obtain a permit/license to engage in cetacean-watch

activities. This legislative framework provides the management agency with the

opportunity to regulate the level of exposure of a cetacean population to tourism

operations. In this case, should the cetacean-watch industry be shown to have a

detrimental effect, the management agency has the power to revoke licenses.

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Clearly, reversing or revoking a license creates short-term economic problems for

the operators and local communities. However, such a legislative structure allows

for such an action. For example, an unprecedented management decision was

made on the dolphin-watch operations in Shark Bay, Western Australia, where the

number of cetacean-watch operators was reduced from two to one within a

“tourism zone”. The removal of one commercial license operating within a specific

area was made after it was shown that the existing number of cetacean-watch

operators had reduced the relative abundance and reproductive success of the

target bottlenose dolphin population (Bejder et al., 2006b, Higham and Bejder,

2008).

In every circumstance, management agencies lack the scientific basis for deciding

on the number of permits to be allocated at the onset of a cetacean-watch industry

at a given location. Thus, the allocation of a conservative number of initial licenses

is important because of the difficulty of removing licenses once already issued

(Higham et al., 2008). The appropriate number of licenses for allocation is likely to

vary between regions and populations as each cetacean population is exposed to

cetacean-watch tourism under differing circumstances. For example, some areas

are more important than others (critical habitats) and individual susceptibility of

animals to impacts vary with age (Müllner et al., 2004, Stalmaster and Newman,

1978, Constantine, 2001), sex, (Lusseau, 2003b, Williams et al., 2002b) previous

experience (Bejder et al., 2009, Bejder et al., 2006a) and reproductive condition

(Nellemann et al., 2000, Culik and Wilson, 1995, Beale and Monaghan, 2004, Parent

and Weatherhead, 2000). Clearly, the interactions between the tourist operation

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and cetacean populations need to be investigated scientifically, the potential

effects of the interactions determined and the levels of acceptable change

determined. For example, cetaceans on their breeding grounds are potentially

more susceptible to the effects of cetacean-watch operations than those on their

migration corridor.

Legislation does not guarantee operator compliance, particularly when the laws are

not communicated adequately to operators (Keane et al., 2011) or are not enforced

(Lundquist and Granek, 2005). For example, in Port Phillip Bay, Victoria, Australia,

commercial cetacean-watch operations were routinely documented in breach of

four permit conditions: approach type, swim time, time in proximity of dolphins and

interaction with newborn calves (Scarpaci et al., 2003). As a consequence, the

management framework may ultimately fail as its goals may not be achieved

(Kelleher, 1999). Improvements in operator compliance with regulations may

require operator education, tourist education, regulation enforcement or a

combination thereof (Scarpaci et al., 2003). Thus, it is important that legislation be

explicit for the protection of cetacean populations from cetacean-watch activities

and that it is supported by programs to ensure public awareness of the program

and that the legislation is enforced to ensure compliance.

2.5 Important considerations for implementing time-area management strategies

Effective long-term management strategies are those that monitor cetacean-watch

operations, establish thresholds of human-cetacean interactions and respond

adaptively to the impacts of cetacean-watch operations and natural phenomena

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(Higham et al., 2008). Spatial management, including the use of protected areas or

closures to commercial operations or no-take/no-watch areas, at the appropriate

scale, is an effective approach in protecting both terrestrial and marine ecosystems

(Hoyt, 2005, Pauly et al., 2002). Protected areas have been implemented as

precautionary measures when managing marine ecosystems to reduce the risks of

overexploitation, especially, when scientific knowledge about the ecosystem is

lacking (Hoyt, 2005). This precautionary approach incorporates uncertainty in the

decision-making process (Hoyt, 2005, Lauck et al., 1998). For protected areas where

scientific knowledge is limited, the spatial area of the protected area might be

increased as a precaution to take into account the uncertainty in the available

information. Spatial management has been used to conserve biodiversity, protect

cetaceans, and delineate areas for specific use to mitigate anthropogenic threats,

enhance productivity and provide public focus for marine conservation. It has also

been a major part of fisheries management to protect spawning aggregations,

immature individuals and critical habitats. In addition to spatial closures, limiting

access to cetacean-watching in time, i.e. temporal closures, can be introduced to

prohibit human access to cetaceans during specific times that are critical to

targeted animals/populations and therefore restrict human-cetacean interaction at

these times (Notarbartolo di Sciara et al., 2008, Constantine et al., 2004).

The IUCN (1994) definition of a protected area is “[a]n area of land and/or sea

especially dedicated to the protection and maintenance of biological diversity, and

of natural and associated cultural resources, and managed through legal or other

effective means” and six categories of protected area have been defined based on

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the on the main management purpose and the primary objective of the protected

area (Table 2-2). Several of these categories are significant for the conservation of

cetaceans, particularly the Nature Conservation Reserves, that are established to

maintain, conserve and restore species and habitats and the Resource Reserves

that are designed to protect natural ecosystems and use natural resources

sustainably, when conservation and sustainable use can be mutually beneficial

(Table 2, Dudley, 2008).

Protected areas for cetaceans are growing in number around the world (Hoyt,

2011) (Table 2-3) and are contributing to their conservation (Williams et al., 2009,

Notarbartolo di Sciara et al., 2008, Hinch and De Santo, 2010). Currently, the

greatest number of these protected areas are found in Australia and New Zealand

(75), the Wider Caribbean (65) and the South Atlantic (56), while the number of

reserves is likely to almost double in the Mediterranean and Black Seas should the

proposed protected areas be approved (Table 2-3). International boundary

agreements between a number of countries have been established to protect

cetaceans. For example, a ‘sister-sanctuary’ relationship between the US Stellwagen

Bank National Marine Sanctuary (SBNMS), which is located between Cape Ann and

Cape Cod in the south west of the Gulf of Maine in the north, and Santaurio de

Mamiferos Marinos de la República Dominicana (SMMRD), 3000 miles to the south,

was established in 2006 to protect the North Atlantic humpback whale, Megaptera

novaeangliae, at both ends of its range (Table 2-3). The SBNMS (2,181 km2) protects

the feeding and nursery areas of this population while the SMMRD (2500 km2)

protects the mating and calving areas (Ward and MacDonald, 2009).

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Area-time management frameworks have been developed to intervene when

unregulated and unmanaged cetacean-watch tourism has been identified as having

the potential to threaten the viability of the target cetacean population. For

example, Samadai Reef, on the coast of the Red Sea, Egypt, was an area well known

by locals as an important for area for spinner dolphins (Notarbartolo di Sciara et al.,

2008). Tour operators in the region began to offer unregulated swim-with dolphin

tours and the number of tourists visiting the area increased dramatically, with more

than 800 swimmers reported to be interacting with spinner dolphins in the small

1.5 km2 lagoon in a single day (Notarbartolo di Sciara et al., 2008). Spinner dolphins

presence started to decrease dramatically and concerns were raised about the

effects of human activities on the local dolphin population (Notarbartolo di Sciara

et al., 2008). As a consequence, authorities took the extreme measure of

suspending all tourist visits to Samdai Reef until a suitable management plan was

developed. In 2004, an area-time management regime was introduced that

included zoning the reef into four different use areas: no tourist zone; diving and

snorkelling zone; boat mooring zone; and dive sites zone, and interactions with

people were confined to a limited time each day (10 am – 2 pm). In addition, the

number of visitors was restricted to 100 divers and 100 snorkelers per day, visitor

entrance fees were introduced and visits were allowed only under the supervision

of trained and certified guides. Monitoring and enforcement programs were also

introduced (Notarbartolo di Sciara et al., 2008).

To achieve the successful implementation of an area-time management plan for

cetacean watching, a number of developmental steps are required, these include

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31

consultation with the commercial tour operations, the social science community

and natural scientists (Higham et al., 2008). It is the responsibility of the

management agency to establish and coordinate the development of the legislative

framework, to which cetacean-watch tourism operators are required to adhere

during cetacean encounters. The legislative framework should also be developed

prior to the onset of a commercial tourism program (Higham et al., 2008).

Considering area-time closures as a management framework, sizes, locations of

areas and access restrictions to these areas during times when the target cetacean

population is deemed most vulnerable to disturbance, should be identified In

addition, regulations for the allocation/revocation of permits and legislation to

control tourism operations such as restrictions on engine noise, speed/approach,

time with dolphins, and the implementation of a visitor interpretation program,

should be developed. The likely response of tour operators to restrictions of access

to cetaceans also needs to be considered, as this may lead to increased interactions

in other areas which may have unforeseen detrimental effects on the population.

For example, if an area-time management framework were introduced in the

resting bays of Hawaiian spinner dolphins would this result in more interactions

with this population outside the resting bays? This issue of shifts in tour operations

in response to restrictions or closures to access, is also a challenge that faces

fisheries managers who have the issue of displaced fishing effort following the

implementation of sanctuary or no-take zones for fishing (Hilborn et al., 2004).

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Tab

le 2

-2 :P

rote

cted

are

a ca

tego

ries

, de

scri

pti

on

s an

d p

rim

ary

ob

ject

ives

as

det

erm

ine

d b

y th

e In

tern

atio

nal

Un

ion

fo

r th

e C

on

serv

atio

n o

f N

atu

re (

IUC

N)

(Du

dle

y, 2

00

8)

Pri

mar

y o

bje

ctiv

e

To c

on

serv

e re

gio

nal

ly, n

atio

nal

ly o

r gl

ob

ally

ou

tsta

nd

ing

eco

syst

ems,

sp

ecie

s (o

ccu

rren

ces

or

aggr

egat

ion

s) a

nd

/ o

r

geo

div

ersi

ty f

eatu

res:

th

ese

attr

ibu

tes

will

hav

e b

een

fo

rmed

mo

stly

or

enti

rely

by

no

n-h

um

an f

orc

es a

nd

will

be

de

grad

ed

or

des

tro

yed

wh

en s

ub

ject

ed

to

all

bu

t ve

ry li

ght

hu

man

imp

act.

To p

rote

ct t

he

lon

g-te

rm e

colo

gica

l in

tegr

ity

of

nat

ura

l are

as

that

are

un

dis

turb

ed b

y si

gnif

ican

t h

um

an a

ctiv

ity,

fre

e o

f

mo

der

n in

fras

tru

ctu

re a

nd

wh

ere

nat

ura

l fo

rces

an

d p

roce

sses

pre

do

min

ate,

so

th

at c

urr

ent

and

fu

ture

gen

erat

ion

s h

ave

the

op

po

rtu

nit

y to

exp

eri

en

ce s

uch

are

as.

To p

rote

ct n

atu

ral b

iod

iver

sity

alo

ng

wit

h it

s u

nd

erly

ing

eco

logi

cal s

tru

ctu

re a

nd

su

pp

ort

ing

envi

ron

men

tal p

roce

sses

,

and

to

pro

mo

te e

du

cati

on

an

d r

ecr

eati

on

.

To p

rote

ct s

pec

ific

ou

tsta

nd

ing

nat

ura

l fea

ture

s an

d t

hei

r

asso

ciat

ed b

iod

iver

sity

an

d h

abit

ats.

To m

ain

tain

, co

nse

rve

and

res

tore

sp

ecie

s an

d h

abit

ats.

To p

rote

ct a

nd

su

stai

n im

po

rtan

t la

nd

scap

es/s

easc

ape

s an

d

the

asso

ciat

ed

nat

ure

co

nse

rvat

ion

an

d o

ther

val

ues

cre

ated

by

inte

ract

ion

s w

ith

hu

man

s th

rou

gh t

rad

itio

nal

man

agem

en

t

pra

ctic

es.

To p

rote

ct n

atu

ral e

cosy

stem

s an

d u

se n

atu

ral r

eso

urc

es

sust

ain

ably

, wh

en

co

nse

rvat

ion

an

d s

ust

ain

able

use

can

be

mu

tual

ly b

enef

icia

l.

Des

crip

tio

n

Stri

ctly

pro

tect

ed a

reas

set

asi

de

to p

rote

ct b

iod

iver

sity

an

d a

lso

po

ssib

ly g

eolo

gica

l / g

eom

orp

ho

logi

cal f

eatu

res,

wh

ere

hu

man

visi

tati

on

, use

an

d im

pac

ts a

re s

tric

tly

con

tro

lled

an

d li

mit

ed

to

en

sure

pro

tect

ion

of

the

con

serv

atio

n v

alu

es. S

uch

pro

tect

ed a

reas

can

se

rve

as in

dis

pen

sab

le r

efer

en

ce a

reas

fo

r sc

ien

tifi

c re

sear

ch a

nd

mo

nit

ori

ng.

Usu

ally

larg

e u

nm

od

ifie

d o

r sl

igh

tly

mo

dif

ied

are

as, r

etai

nin

g th

eir

nat

ura

l ch

arac

ter

and

infl

uen

ce, w

ith

ou

t p

erm

anen

t o

r si

gnif

ican

t

hu

man

hab

itat

ion

, wh

ich

are

pro

tect

ed a

nd

man

age

d s

o a

s to

pre

serv

e

thei

r n

atu

ral c

on

dit

ion

.

Are

larg

e n

atu

ral o

r n

ear

nat

ura

l are

as s

et a

sid

e to

pro

tect

larg

e-s

cale

eco

logi

cal p

roce

sses

, alo

ng

wit

h t

he

com

ple

men

t o

f sp

ecie

s an

d

eco

syst

ems

char

acte

rist

ic o

f th

e ar

ea, w

hic

h a

lso

pro

vid

e a

fou

nd

atio

n

for

envi

ron

men

tally

an

d c

ult

ura

lly c

om

pat

ible

sp

irit

ual

, sci

enti

fic,

edu

cati

on

al, r

ecre

atio

nal

an

d v

isit

or

op

po

rtu

nit

ies.

Are

se

t as

ide

to p

rote

ct a

sp

ecif

ic n

atu

ral m

on

um

ent,

wh

ich

can

be

a

lan

dfo

rm, s

ea m

ou

nt,

su

bm

arin

e ca

vern

, geo

logi

cal f

eatu

re s

uch

as

a

cave

or

even

a li

vin

g fe

atu

re s

uch

as

an a

nci

ent

gro

ve. T

hey

are

gen

era

lly q

uit

e sm

all p

rote

cte

d a

reas

an

d o

fte

n h

ave

hig

h v

isit

or

valu

e.

Aim

to

pro

tect

par

ticu

lar

spec

ies

or

hab

itat

s an

d m

anag

emen

t re

flec

ts

this

pri

ori

ty. M

any

cate

gory

IV p

rote

cted

are

as w

ill n

eed

re

gula

r, a

ctiv

e

inte

rve

nti

on

s to

ad

dre

ss t

he

req

uir

emen

ts o

f p

arti

cula

r sp

ecie

s o

r to

mai

nta

in h

abit

ats,

bu

t th

is is

no

t a

req

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Table 2-3 : Protected areas with cetacean habitat across 18 marine regions, adapted from Hoyt (2011).

Marine region

MPA or PA (marine protected area or protected area for river

dolphins on land)

High seas MPA (marine protected

area outside national waters of

EEZ)

National EEZ Sanctuary (cetacean

no hunting zone within a countries national waters or

EEZ)

Total Existing Proposed

Existing with

proposed expansion Existing Proposed Existing Proposed

1 Antarctica 4 0 0 3 1 0 0 8 2 Arctic 29 8 4 0 4 0 0 45 3 Mediterranean and Black Seas

45 38 11 1 17 0 0 112

4 North West Atlantic

9 2 1 0 1 1 0 14

5 North East Atlantic

14 27 8 0 1 2 0 52

6 Baltic 6 6 0 0 0 0 0 12 7 Wider Carribean1

65 4 2 0 0 4 1 76

8 West Africa 40 4 1 0 0 0 1 46 9 South Atlantic 56 7 3 0 1 3 0 70 10 Central Indian Ocean

17 7 8 0 0 1 0 33

11 Arabian Seas 20 4 1 0 0 0 0 25 12 East Africa 22 2 2 0 1 1 0 28 13 East Asian Seas

23 8 1 1 0 0 1 34

14 North and South Pacific

21 3 4 0 0 12 0 40

15 North East Pacific

20 3 5 0 0 1 0 29

16 North West Pacific

21 3 0 0 0 0 0 24

17 South East Pacific

30 5 2 0 1 4 0 42

18 Australia – New Zealand

75 7 0 0 0 2 0 84

Total 517 138 53 5 27 31 3 774

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Ideally, the management agency would develop a draft management plan based on

the collection and analysis of baseline data on the proposed target population, and

consultations with key stakeholders, before any cetacean-watch tourism operations

commence. However, this is rarely the case (Bejder and Samuels, 2003), and

management frameworks are generally implemented after cetacean-watch tourism

has begun and when concerns have been identified about the viability of the target

cetacean population.

2.5.1 Understanding the cetacean population targeted by the cetacean-watch industry

Critical habitats for cetaceans are areas in which the cetacean species carries out

behaviours that are vital to the viability of the underlying population. These areas

include foraging, breading, nursing, socialising or resting habitats (Hoyt, 2011).

Repeated disturbance of cetaceans within these critical habitats has been

implicated as a factor in reducing the viability of the target population (Bejder et al.,

2006b, Lusseau et al., 2006). Prior to developing a management plan, it is important

to understand the behaviour and biology of the focal population, particularly to

identify critical areas, and the time of their use (Lusseau, 2003a, Lusseau et al.,

2009). A monitoring program should consist of a rigorous sampling design that

allows an understanding of the target cetacean population to be developed. The

sampling design should incorporate methodologies that allow reliable and detailed

data on the population, its habitat, and potential threats to be collected. The

sampling program should aim to estimate population size, population structure

(e.g. age structure, sex ratio), reproductive rates and behavioural budgets (Lusseau,

2004) and provide data for developing models to identify critical areas and habitat

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use. For example, NOAA initiated the development of a research program to

understand the spinner dolphin population and its interactions with cetacean

watching activities along the west coast of the island of Hawaii. A suite of modern

visual and acoustic techniques, including boat-based photographic

identification/focal follows, land-based theodolite tracking, and bottom-mounted

acoustic loggers, are being used in this study. A systematic photographic

identification sampling regime, based on Pollock’s Robust Design mark-recapture

model (Pollock et al., 1990), was developed to determine spinner dolphin

population parameters in four resting bays along the west coast of the island of

Hawaii. In addition, group focal follows are carried out, to observe behaviours and

human interactions outside the resting bays. Where possible land-based theodolite

tracking of spinner dolphins, their behaviours and human interactions within the

resting bays are carried out. In addition to understanding the characteristics of the

cetacean population and its interactions with tourism operations, abiotic and biotic

habitat characteristics should be mapped. The potential threats from cetacean-

watch operations to the habitat should be understood, and the potential for these

threats to effect the target cetacean population assessed.

Cetaceans transition between behavioural states over time. For example, cetaceans

can display foraging behaviour followed by socialising behaviour which may be

followed by resting behaviour. When cetaceans are disturbed, however, the

probability of transitioning from one behavioural state to another is altered

(Lusseau, 2003a), resulting in a change in their overall behavioural budget. Thus, if

the probability of transition from one behavioural state to another, in the absence

of cetacean-watch tourism, can be identified for a species, then an change in this

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transition probability could provide an early warning indicator of a deleterious

effect in the presence of cetacean watching tourism (Lusseau, 2004). Furthermore,

‘show stoppers’, such as a decline in reproductive success, should be identified that

provide immediate evidence of significant impact and would result in management

intervention (Bejder et al., 2006b).

Baseline data should be used to develop monitoring programs and management

plans (Higham et al., 2008) so that changes in the population can be monitored

during the onset and growth of tourism activities (Bejder and Samuels, 2003).

Reference points can be developed from the indicators and the baseline data to

provide points target reference points for tourism and limit reference points, at

which management actions are initiated, i.e. when pre-determined acceptable

thresholds have been exceeded. Target and limit reference points are used

commonly in fisheries to monitor and manage the health of fish stocks and their

ecosystems, e.g. spawning biomass at Maximum Sustainable Yield, Percent of Virgin

Biomass, and Spawning Potential Ratio. Similarly, Potential Biological Removal (PBR)

(Wade, 1998) assesses the allowable limits of mortality from anthropogenic

disturbance (Williams et al., 2009). The PBR is calculated as the product of a

minimum population estimate (Nmin, one half of the maximum theoretical net

productivity rate (Rmax) and recovery factor (Fr) (PBR = Nmin x 0.5Rmax x Fr)

(Wade, 1998).

Area-time management systems require an understanding of why and when

specific habitats/areas are critical to the focal population. Critical habitats

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encompass areas of high animal density, and those areas essential to the viability of

the population e.g. a nursing area where only mothers and calves are present.

Critical habitats include foraging, breeding, nursing, socialising and resting areas

(Hoyt, 2005, Lusseau and Higham, 2004, Williams et al., 2009, Ross et al., 2011).

Quantifying the importance of an area to a cetacean population by assessing

habitat preference, and the behaviours in these habitats, is becoming an important

tool in the development of area-time management systems to mitigate

anthropogenic threats (Higham and Lusseau, 2007). For example, a high proportion

of the population of northern resident killer whales (Orcinus Orca), in Johnstone

Strait, Canada, uses a small proportion of their habitat for a rare behaviour called

beach-rubbing, where individuals rub their bodies on the smooth pebble beaches,

thought to remove parasites or have some social significance (Williams et al., 2009).

This does render the population vulnerable due to the high proportion of the

population that uses this small area, coupled with the heavy human use of

Johnstone Strait by large ships nearby (Williams et al., 2009). Bottlenose dolphins in

Fiordland, New Zealand, are particularly sensitive to boat interactions while resting,

and to a lesser extent, while socialising (Lusseau, 2004). Using behavioural state

observations, Lusseau and Higham (2004) identified critical areas for dolphin resting

and socialising in Doubtful Sound. However, a voluntary code of conduct was

introduced which includes some elements of zoning (unregulated), but not in the

areas identified by Lusseau and Higham (2004). Similarly, the commercial dolphin-

swim/watch industry in the Bay of Islands, New Zealand, alters the behaviour of

bottlenose dolphins (Constantine et al., 2004). Resting behaviour was the most

sensitive behavioural state to commercial boat numbers, and decreased

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significantly with increasing number of vessels. Constantine et al. (2004), suggested

that the local legislation was ineffective in protecting the bottlenose dolphin

population from commercial operations, and, as a consequence, recommended

measures to minimise tour-boat impacts by restricting the number of boat trips,

trip durations and limiting the amount of time dolphins are exposed to tour-boats.

Identifying critical habitat should also consider both the abiotic and biotic

characteristics of the habitat, and link these characteristics to the focal cetacean

population’s behaviour while using the area. These characteristics may include

abundance of prey, and characteristics of the bathymetry, substrate, temperature,

salinity, turbidity, tide and currents. For example, Hawaiian spinner dolphins prefer

sheltered sandy bays to rest in during the day (Norris and Dohl, 1980). Any changes

to this habitat, may have significant biological consequences for the cetacean

population and the efficacy of the protected area. For example, it was suggested

that a decline in prey resources inside a protected area in the Moray Firth, Scotland,

caused a population of bottlenose dolphins to extend their range outside the

boundaries of the protected area (Wilson et al., 2004).

Oceanographic features may also be used to identify critical cetacean habitats.

Johnston and Read (2007) highlighted an ecological link between a predictable

oceanographic feature in time and space that attracts cetaceans to the Bay of

Fundy, Canada. In the summer and during flood tides, the Grand Manan Island

wake attracts foraging fin whales (Balaenoptera physalus), minke whales,

(Balaenoptera acutorostrata) (Johnston et al., 2005a) and harbour porpoise

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(Phocoena phocoena) (Johnston et al., 2005b). Oceanographic observations

provided an understanding of the spatial and temporal variability in the physical

forces controlling the island wake (Johnston and Read, 2007). Secondary flows in

the wake aggregate prey to predictable locations where the cetaceans focus their

foraging efforts. These ecological links between the foraging habitats and foraging

behaviour over space and time are therefore important factors when considering

the spatial boundaries of a marine protected area in this region and Johnston and

Read (2007) recommended that a proposed protected area at the Grand Manan

Island encompass the island wake. The predictable nature of this oceanographic

feature also allows human activities to be controlled within the protected area

during the predictable tidal flows that generate the island wake and while being

exploited by foraging mega fauna.

2.5.2 Socio - economic considerations

Cetacean-watch operations are important for the economic sustainability of many

coastal communities around the world (Hoyt, 2007). Access restrictions to protect

cetacean populations from tourism operations may have implications for the

economic status of local coastal communities. Therefore, it is important to highlight

the benefits of the sustainable management of cetacean watching operations and

the significance of area-time management systems to local businesses and the

wider community, with the aim of maximizing the economic viability of the local

cetacean-watch industry, while sustainably managing the target cetacean

population.

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Raising awareness of the conservation efforts among visitors and the local

community is an important component in the development of any long-term

management framework for cetacean watching. Many commercial cetacean-watch

operations provide an educational component that provides information on the

target cetacean population, its environment, the associated conservation efforts,

and to some degree the plight of cetaceans worldwide (Orams, 1997, Higham and

Carr, 2002, Christensen et al., 2007). In some jurisdictions, e.g. New Zealand,

tourism operations are required to provide an educational component as part of

the cetacean-watch experience, in order to obtain a cetacean-watch permit

(Carlson, 2009). As a consequence, in general, these cetacean-watch operations are

perceived to be beneficial and as ecotourism (Bejder and Samuels, 2003). However,

unless the cetacean-watch operation is environmentally responsible and

contributes to conservation, it should be considered as nature-based tourism, not

ecotourism (Bejder and Samuels, 2003). The debate is continuing on the efficacy of

these education programs in achieving the goal of raising environmental and

conservational awareness and ultimately changing human behaviour (Orams, 1996,

Ballantyne et al., 2010, Higham and Carr, 2002). Studies are showing that carefully

designed educational nature-based programs that incorporate strategies to

facilitate behavioural change, can instil greater environmental and conservational

awareness in tourists and lead to changes in their behaviour and attitude to

interactions with marine fauna (Orams, 1997, Higham and Carr, 2002, Ballantyne et

al., 2010). It is important, however, that social science research continues to collect

data on visitors and their perceptions on the cetacean watching operation to

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enable the effectiveness of the education program to be assessed and adapted if

necessary.

2.5.3 Management considerations

Reliable and detailed scientific data on the critical habitat of cetaceans should be

used to provide management agencies with the information to establish protected

areas. The spatial scale of the protected area should be large enough to be

biologically relevant and small enough that cetacean-watch operations can be

effectively managed within its boundaries (Ashe et al., 2010, Ross et al., 2011). In

addition, the temporal scale of the behaviour identified as critical, should inform

management agencies on when restrict human access to the protected area.

Population estimates, reproductive rates and changes in behavioural budget

(Lusseau, 2004, Bejder et al., 2006b), should inform management agencies in

establishing quantifiable Limits of Acceptable Change (LAC) in the target cetacean

population (Higham et al., 2008). Spatial and temporal scales and LAC criteria

should then be used to establish clearly defined legislation for operators and

enforcement within the protected area boundaries.

Rules and regulations are only part of the necessary tools to help ensure that

commercial cetacean-watch operations minimise impacts on the focal cetacean

population - these rules and regulations must be supplemented with education and

enforcement programs to ensure the success of a management plan (Keane et al.,

2008). Without these programs, compliance with the management plan may be

low, which makes the rules and regulations irrelevant, as no distinction would exist

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between the protections offered within the management area to those outside its

boundaries (Guidetti et al., 2008, Vanzella-Khouri, 2009). A lack of compliance to

rules and regulations relating to the reduction of impacts on cetaceans from

cetacean-watch operations, has been demonstrated where legislation has been

invoked and enforcement is not present or is ineffective (Scarpaci et al., 2003, Allen

et al., 2007, Wiener et al., 2009, Christiansen et al., 2010). Legislation, clearly

defined, should provide management agencies with the authority to revoke the

operator licenses (Bejder et al., 2006b, Higham and Bejder, 2008). Therefore, it

seems prudent that management agencies develop a licensing system that provides

clear instruction to the commercial cetacean-watch operation on permit conditions,

including the circumstances under which a permit could be revoked. Without

enforcement or legislation, conservation management plans may fail to meet their

goals and, ultimately, fail to protect the focal cetacean population and as a

consequence the long-term viability of the cetacean-watch tour operations.

2.6 Summary

The increase in cetacean-watch tourism, particularly since the 1970s, and its rapid

expansion into developing countries, has in general, been perceived as beneficial

and a benign activity. However, concerns have been raised about the impacts of

cetacean-watch tourism on targeted populations around the world, and whether

these impacts are likely to cause biologically significant effects. In this chapter I

argue that area-time management systems should be considered as an important

tool to manage cetacean-watch tourism.

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The important challenge for scientists is to develop rigorous and reliable techniques

that quantify the behavioural dynamics of cetacean populations. This knowledge

can then be used to quantify the effects of both natural phenomena and

anthropogenic disturbance on these behavioural dynamics, to identify biologically

significant changes in the underlying population. Providing estimates on population

size, identifying habitat use, behaviours in different habitats, and the behavioural

changes in cetacean populations in response to cetacean watching operations,

scientists will then be able to identify when and where cetacean populations are at

their most vulnerable. Management agencies can use this information as a basis to

develop the appropriate legislative management framework to protect cetacean

populations from disturbance when they are most vulnerable. In addition, the

efficacy of the management framework, as a mitigation approach, must be

continuously monitored and should adapt quickly and accordingly when necessary

The management framework must also provide management agencies with

sufficient legislation to prevent tour operators from operating when rules have

been violated. I argue that a licensing system should be mandatory, so that

management agencies have the authority to revoke a licence should it be deemed

necessary. Furthermore, studies have shown that effective education programs and

enforcement are essential to ensure that operators comply with legislation; poor-

compliance is likely to result in detrimental effects on the cetacean population, the

cetacean-watch operators and the socio-economic state of the community that

relies on the tourism industry.

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3 Abundance and survival rates of the Hawaii Island associated spinner dolphin (Stenella longirostris) stock

3.1 Abstract

Reliable population estimates are critical to implement effective management

strategies. The Hawaii Island spinner dolphin (Stenella longirostris) is a genetically

distinct stock that displays a rigid daily behavioural pattern, foraging offshore at

night and resting in sheltered bays during the day. Consequently, they are exposed

to frequent human interactions and disturbance. I estimated population

parameters of this spinner dolphin stock using a systematic sampling design and

capture-recapture models. From September 2010 to August 2011, boat-based

photo-identification surveys were undertaken monthly over 132 days (>1,150 hours

of effort; >100,000 dorsal fin images) in the four main resting bays along the Kona

Coast, Hawaii Island. All images were graded according to photographic quality and

distinctiveness. Over 32,000 images were included in the analyses, from which 607

distinctive individuals were catalogued and 214 were highly distinctive. Two

independent estimates of the proportion of highly distinctive individuals in the

population were not significantly different (p=0.68). Individual heterogeneity and

time variation in capture probabilities were strongly indicated for these data;

therefore capture-recapture models allowing for these variations were used. The

estimated annual apparent survival rate (product of true survival and permanent

emigration) was 0.97 SE±0.05. Open and closed capture-recapture models for the

highly distinctive individuals photographed at least once each month produced

similar abundance estimates. An estimate of 221±4.3 SE highly distinctive spinner

dolphins, resulted in a total abundance of 631±60.1 SE, (95% CI 524-761) spinner

dolphins in the Hawaii Island stock which is lower than previous estimates. When

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this abundance estimate is considered alongside the rigid daily behavioural pattern,

genetic distinctiveness and the ease of human access to spinner dolphins in their

preferred resting habitats, this Hawaii Island stock is likely more vulnerable to

negative impacts from human disturbance than previously believed.

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3.2 Introduction

Many islands in tropical and sub-tropical regions represent isolated oases of marine

life, exhibiting higher levels of primary productivity, secondary productivity and

enhanced communities of top predators than the oligotrophic pelagic background

around the islands (Wolanski and Hamner, 1988). In many situations, the cetacean

top predators that have evolved to exploit island-associated productivity in these

regions represent resident, isolated populations, often with high site fidelity and

restricted gene flow amongst nearby island regions (Aschettino et al., 2012, Baird et

al., 2008, Martien et al., 2012). Furthermore, many island associated small cetacean

populations exhibit specialized behaviours and social dynamics that have evolved to

facilitate their survival. However, due to their specialized demography and

behavioural ecology, it is becoming increasingly clear that island-associated,

populations of small odontocetes may be particularly vulnerable to anthropogenic

effects (e.g. false killer whales in the Hawaiian Archipelago). Hawaiian spinner

dolphins represent one such species – they exist as small isolated populations with

restricted ranges and exhibit a specialized behavioural ecology (Norris and Dohl,

1980, Norris et al., 1994) that renders them vulnerable to human activities in

coastal environments. Spinner dolphins occur in sub-tropical and tropical oceans

worldwide and are named because of their aerial behaviours (Perrin, 1990). Gray's

spinner dolphin, (Stenella longirostris), is the most widely distributed subspecies

(Perrin et al., 1999) and occurs throughout the entire Hawaiian archipelago.

The Hawaiian archipelago consists of the mainly uninhabited North West Hawaiian

Islands, from Kure Atoll in the north to the eight inhabited main Hawaiian Islands,

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with Hawaii Island in the south. Recent genetic analyses revealed that Hawaiian

spinner dolphins are distinct from populations found elsewhere (Andrews, 2009),

and moreover, subpopulations within the Hawaiian archipelago were also found to

be genetically distinct (Andrews et al., 2010). As a consequence, Hawaiian spinner

dolphins have been divided into five different island/island-group management

units under the US Marine Mammal Protection Act (MMPA) by the National

Oceanic and Atmospheric Administration’s National Marine Fisheries Service

(NMFS) that correspond with two broad geographical regions: 1.) three in the Main

Hawaiian Islands: Hawaii Island, Oahu/4-Islands area, Kauai/Niihau, and 2.) two in

the Northwest Hawaiian Islands: Pearl & Hermes Reef and Kure/Midway. The NMFS

is mandated by the MMPA to assess the population status and threats for all

identified stocks of marine mammals in U.S. waters.

At present, reliable abundance estimates are not available for any stock of

Hawaiian spinner dolphins, a significant impediment to developing appropriate

management plans for any spinner dolphin management unit in Hawaii. Previously,

a line transect survey of the entire Hawaiian Exclusive Economic Zone resulted in an

abundance estimate of 3,351 (Barlow, 2006) spinner dolphins throughout the entire

Hawaiian archipelago which assumed a single Hawaiian stock (Carretta et al., 2013).

Considering the ship’s track and the coastal daytime reliance of this species, the

large ship-based estimate provided by (Barlow, 2006) is not appropriate for

estimating the abundance of inshore spinner dolphins. Other studies which

estimated the abundance of spinner dolphins along the Kona Coast were based on

opportunistic photo-identification sightings and were not specifically designed to

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estimate abundance (Norris et al., 1994, Ostman, 1994, Ostman-Lind et al., 2004,

Mobley et al., 2000). As a consequence, a collaborative project, ‘spinner dolphin

acoustics population parameters and human interaction research’ (SAPPHIRE) was

developed in 2010 to assess the abundance, distribution and behaviour of spinner

dolphins along the Kona Coast. The SAPPHIRE project combines boat-based photo-

identification and group focal follows and land-based theodolite observations,

along with passive acoustic monitoring, to evaluate the effects of human

interactions on spinner dolphins in the region.

Hawaiian spinner dolphins exhibit a rigid, diel behavioural pattern. At night, they

forage cooperatively offshore in deeper water (Benoit-Bird and Au, 2009). During

the day, they move into shallow, coastal habitats to rest and socialise (Norris and

Dohl, 1980), preferring sandy-substrate locations that are sheltered from the wind,

typically less than 50 m deep (possibly to aid in predator detection) and within close

proximity to their deep-water foraging areas (Thorne et al., 2012, Norris and Dohl,

1980, Norris et al., 1994). This rigid, behavioural pattern is unlike the less

predictable patterns observed in other coastal dolphin species, such as the

bottlenose dolphin (Tursiops sp.), a species known to readily switch between

behavioural states, e.g. from foraging to resting to socialising (Bearzi et al., 1999).

To maintain this rigid behavioural pattern, spinner dolphins are dependent on these

sheltered bays to rest (Norris and Dohl, 1980, Norris et al., 1994). However, within

these same habitats, dolphins are easily accessible and thereby exposed to human

interactions and disturbance (Courbis and Timmel, 2009, Ostman-Lind, 2008,

Timmel et al., 2008, Wiener et al., 2009). When anthropogenic impacts are

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considered in combination with their genetic distinctiveness and low gene flow,

Hawaiian spinner dolphin’s susceptibility to human disturbance is of serious and

increasing concern for the survival of the stock.

During periods of activity, animals usually exhibit enhanced brain function, which is

often referred to as vigilance. Vigilance is required for many activities including

foraging, socializing and predator avoidance. As animals undertake these

cognitively challenging activities they tire, and accrue what is often referred to as a

vigilance decrement (Dukas and Clark, 1995). In higher vertebrates, vigilance

decrements can manifest in a decreased ability to detect camouflaged predators or

cryptic prey (Dukas and Clark, 1995). They may also manifest in more abstract ways

such as reduced decision-making capabilities (Dukas and Clark, 1995). To recover

from a vigilance decrement, animals must rest (Cirelli and Tononi, 2008). The

derived behavior of spinner dolphins renders them especially vulnerable to

interrupted resting bouts during the day, as they have a limited ability to recover

before embarking on another foraging bout the following evening.

Dolphin-watch tourism can cause biologically significant effects on exposed

communities by causing habitat displacement (Lusseau, 2005, Bejder et al., 2006b).

Short-term studies reveal that an increase in vessel, kayak and swimmer traffic both

inside and outside of known resting bays in Hawaii have resulted in spinner

dolphins spending less time in important habitats (Ostman-Lind et al., 2004).

Consequently, their rest periods are truncated and interrupted (Courbis, 2007,

Courbis and Timmel, 2009, Delfour, 2007). This type of anthropogenic disturbance

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of spinner dolphins in their resting habitat may have negative, long-term impacts

that will likely reduce their distribution and abundance over the long term (Ostman-

Lind et al., 2004, Lammers, 2004). Unfortunately, current scientific literature is

lacking accurate information to inform how long-term disturbance may impact

Hawaiian spinner dolphins, specifically in response to the cumulative exposure of

human disturbance in important resting habitats.

For small cetaceans, capture-recapture studies, based on photo-identification, have

proven to be a reliable method for estimating population parameters, such as

abundance, survival and recruitment rates (Pollock et al., 1990, Nicholson et al.,

2012, Cantor et al., 2012, Silva et al., 2009, Gormley et al., 2005, Smith et al., 2013).

However, the characteristics of individual cetaceans and the methods used to

photograph them can introduce heterogeneity in the capture probabilities and

misidentification of individuals (Hammond et al., 1990). Careful attention to the

study design can help improve the adherence of the sampling methodology, to the

assumptions of capture-recapture models and mitigate biases due to heterogeneity

and misidentification of dolphins. Two types of population models are generally

considered for capture-recapture sampling designs: closed and open population

models (Wilson et al., 1999, Larsen and Hammond, 2004, Gormley et al., 2005,

Cantor et al., 2012, Nicholson et al., 2012, Smith et al., 2013). During long-term

studies, it is not always possible to assume that the population being studied is

closed, and therefore, open population models should be used (Pollock et al., 1990,

Nicholson et al., 2012, Smith et al., 2013).

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As part of the SAPPHIRE research project, the objectives of this study were to

estimate the population abundance and survival rate of the Hawaii Island spinner

dolphin stock using a systematic sampling design, and both open and closed

capture-recapture population models. The resulting scientific data are the first to

provide accurate and reliable baseline population estimates for this stock. This

information will be useful for management agencies for both stock assessment

purposes, and to assess the effectiveness of planned management actions that are

aimed at mitigating negative impacts of human-dolphin interactions.

3.3 Materials and methods

3.3.1 Fieldwork

The Hawaiian archipelago is located in the Pacific Ocean, approximately 3,200 km

southwest of mainland United States. Hawaii Island is the largest, youngest and

most southerly of the main Hawaiian Islands. On the leeward side of the island is

the Kona Coast, where the four main spinner dolphin resting bays are located

(Figure 3.1): Kauhako Bay, Honaunau Bay, Kealakekua Bay and Makako Bay (Norris

and Dohl, 1980, Norris et al., 1994, Courbis and Timmel, 2009). In addition, these

bays are consistently used by boats, kayaks, stand-up paddle boards and swimmers

for recreational purposes, thus providing opportunities for people to interact with

the resting dolphins (Ostman-Lind, 2008, Courbis and Timmel, 2009, Timmel et al.,

2008, Norris et al., 1994)

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Figure 3.1 Map of the study area illustrating the locations of the four spinner dolphin resting bays, Kauhako Bay, Honaunau Bay, Kealakekua Bay and Makako Bay, along the Kona Coast of Hawaii Island in relation to the other island regions in the Main Hawaiian Islands (inset).

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3.3.2 Sampling design

A systematic sampling design was developed to study the Hawaii Island spinner

dolphin stock. From September 2010 to August 2011 (excluding May 2011) boat-

based photographic-identification surveys were carried out during 12 days of each

month in the four resting bays in a sequential order: Kauhako Bay for four days;

Honaunau Bay for two days; Kealakekua Bay for four days; and Makako Bay for two

days. I would arrive at a bay (only one bay each day) at 0700h. If the dolphins

weren’t present I would wait until 1600h to see if they would arrive. I carried out

boat-based photo-identification (see below) if dolphins were present (or arrived

during the day). Each bay was systematically surveyed on the same dates each

month, regardless of whether dolphins were present or absent. This sampling

regime provided consistent and even effort throughout the study period and area.

3.3.3 Photographic-identification

The boat-based photo-identification team consisted of three to five observers with

two digital SLR cameras: a Nikon D300s and a Nikon D300, both with Nikon 80mm

to 400mm AF VR Zoom lenses. I used a ‘100 m chain rule’ (Smolker et al., 1992,

Gero et al., 2005), to determine members of each group of spinner dolphins, where

any animals within 100 m of each other were considered to be members of the

same group. When a dolphin group was sighted the dolphins were approached for

surveying and group size was determined. With dolphin groups <=20 I had a greater

probability of obtaining good photographs of all individual group members which,

in turn optimised the chance that the more distinctly marked individuals were not

more likely to be photographed than the less distinctly marked individuals.

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Photographs were taken when dolphins surfaced within 25 m of the research

vessel. A dolphin survey would last a minimum of 30 minutes and maximum an

hour with a minimum of a 30 minute break between surveys. Breaks between

dolphin group surveys were to limit the disturbance to the focal group from the

research vessel. Repeated dolphin group surveys optimised the probability of

capturing all animals in the group. Field observations also noted if groups from

outside the bays joined the focal group. Dolphin surveys would continue

throughout the day until either: the whole group was photographed, the dolphins

left the bay, or when environmental conditions deteriorated, i.e. sea state >

Beaufort 2.

3.3.4 Grading and sorting of photo-identification images

All photographs were graded according to photographic quality and distinctiveness

in order to minimise the introduction of bias and to reduce misidentification (Urian

et al., 1999, Friday et al., 2000, Gowans and Whitehead, 2001, Nicholson et al.,

2012). Following (Urian et al., 1999), all photographs were assigned absolute values

based on clarity and focus (2, 4 or 9), degree of contrast (1 or 3), angle of dorsal fin

to the camera (1, 2 or 8), dorsal fin visibility and the proportion of the frame filled

by the dorsal fin (1 or 5). These values were then summed to produce an overall

image quality score. Excellent quality images received scores of 6-7, good quality

images had scores from 8-11, and poor quality images had scores > 11 (Nicholson et

al., 2012, Urian et al., 1999).

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Dorsal fin distinctiveness varies between individual dolphins; thus not all fins were

distinctively marked enough to be included in capture-recapture analyses (Read et

al., 2003, Wilson et al., 1999, Nicholson et al., 2012). As a consequence,

photographs were analysed for individual distinctiveness based on patterns of nicks

and notches on the leading and trailing edges of the dorsal fin that were visible

from both sides (Urian et al., 1999). Overall distinctiveness was based on a scale of

D1 (highly distinctive, features evident in distant and poor quality photographs), D2

(smaller less distinctive nicks and notches) and D3 (not distinctive) (Urian et al.,

1999, Nicholson et al., 2012). Individuals with a distinctiveness rating of D1 or D2

were integrated into the photographic-identification catalogue and highly

distinctive individuals (D1) were used to calculate the mark rate of the stock which

in turn, was used to scale up to estimate total stock size. Every individual was

compared to all others in the catalogue before being assigned a unique

identification code and added separately to the catalogue. Individuals with a

distinctiveness rating of D3 were given a generic identification code but not

included in the catalogue.

3.3.5 Analyses

A capture was defined as a photograph of sufficient quality of an individual

dolphin’s distinctly marked dorsal fin. Only highly distinctive (D1) fins in

photographs of excellent and good quality were included in the capture-recapture

analyses to reduce misidentification errors. Capture histories corresponded to

whether or not an individual was “captured” or “recaptured” during a sampling

occasion. This information was compiled for each individual (excluding calves), after

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the photo grading process. The program MARK (White and Burnham, 1999)

contains a suite of capture-recapture models and goodness-of-fit tests. Using MARK

open and closed capture-recapture models were then applied to these data.

All capture-recapture models make the following assumptions (Williams et al.,

2002a): 1) marks are not lost during the study; 2) marks are correctly recognised on

recapture; 3) individuals are instantly released after being marked; 4) intervals

between sampling occasions are longer than the duration of a sample; 5) all

individuals observed during a given sampling occasion have the same probability of

surviving until the next one; 6) study area does not vary; and 7) homogeneity of

capture probabilities, i.e. that all animals in a sampling occasion have equal

probability of being captured. This assumption is relaxed for certain models which

do allow heterogeneity of capture probabilities.

3.3.6 Estimating abundance and demographic parameters

A variety of closed and open capture-recapture models were fitted using the

program MARK (White and Burnham, 1999). They used the capture histories of all

highly distinct individuals captured on at least one occasion during each month in

any of the four bays. Therefore, the population abundance estimate refers to the

highly distinct individuals.

POPAN (Schwartz and Arnason, 1996) is an integrated combined likelihood

formulation of the original Jolly-Seber open capture-recapture model (Jolly, 1965,

Seber, 1965). POPAN estimates a super-population size (N), entry probabilities,

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apparent survival rates and capture probabilities. Maximum likelihood was used to

estimate the following parameters: N, the super population size, which is all the

animals that existed in the population (stock) at any point during the study period;

φt is the apparent survival probability from sampling period t to sampling period t +

1 and is the product of true survival times the probability the animal does not

emigrate; pt is the probability that an individual available for capture in sampling

period t would be captured in sampling period t; and βt is the probability of entry of

an individual into the population between sample t and sample t + 1. Derived

estimates of the stock sizes at each sampling time (Nt) can also be estimated if

necessary.

A suite of POPAN candidate models were developed to allow for fixed or time-

varying effects on the entry probabilities, apparent survival rates and capture

probabilities. For model selection, Akaike's Information Criterion (AIC) was applied,

which provides a measure of the model fit but is penalized when there is an

increase in the number of parameters (Akaike, 1974). RELEASE, a goodness-of-fit

program in MARK (White and Burnham, 1999), was used to determine goodness-of-

fit for the POPAN models (Lebreton et al., 1992). Over-dispersion in the models was

accounted for, by estimating the over-dispersion measure ĉ using the chi-square

statistic divided by its degrees of freedom. QAIC values were used for model

selection (Anderson et al., 1994) with the lowest QAIC value an indication of the

most parsimonious model.

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MARK was also used to obtain closed population model estimates for models that

allow heterogeneity and time variation of capture probabilities (M0, Mh, Mt and Mth)

[38], because spinner dolphins are long lived. The advantage of using the closed

models, if appropriate, is that they provide estimates with higher precision than

open models and allow for heterogeneity of capture probabilities among

individuals, which is very common in most capture-recapture studies [22, 38].

3.3.7 Estimation of mark rate and total stock size

Estimates of the stock size from the capture–recapture models relate only to the

identifiable animals in the study. Therefore, to estimate the total stock size,

estimates need to be scaled based on the proportion of individuals that are

identifiable. Here, I estimated the proportion of highly distinctive individuals (D1) in

the Hawaii Island spinner dolphin stock using two independent measures of mark

rates: 1 and

2 .

Mark Rate 1 (1 ): For groups consisting of > 20 dolphins, a mark rate was calculated

from the proportion of randomly taken photographs that contained identifiable

dolphins that were obtained from the two photo-identification cameras that were

working simultaneously (Williams, 1993, Wilson et al., 1999). To be included in the

analyses, photographs had to be of sufficient quality to identify a dolphin if it had

been identifiable.

fins edistinctiv non and edistinctiv withsphotographquality high of number total

fins edistinctivhighly withsphotographquality high of number1

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Mark Rate 2 (2 ): A second independent mark rate was calculated using only the

photo-identification data collected for group sizes that were ≤ 20 dolphins. Unlike

with large groups, this scenario assumed that all individuals in the group were

photographed to a quality that would allow dolphins to be identified if they were

identifiable. Thus, for each group that consisted of ≤ 20 dolphins, 2 was calculated

based on the knowledge of group size, together with the number of highly

distinctive individuals in each group:

sizesgroup dolphin total

group each in sindividual edistinctivhighly of number total2

The standard errors (SE) for both mark rate estimates are:

nSE

)ˆ1(ˆ)ˆ(

where n is the sample size in each equation.

Both of these methods assumed that the proportion of identifiable individuals in

the sample was equivalent to the proportion of identifiable individuals in the entire

stock (Hammond, 1986). The numbers of highly distinctive and non-distinctive

individuals were summed over all surveys and used to estimate the total number of

individuals in the stock:

ˆˆ dist

total

NN

Where is the estimated abundance of all individuals (distinctive and non-

distinctive) identified during the study period, is the abundance estimate of

the highly distinctive individuals, and is the estimated proportion of distinctive

individuals (Burnham et al., 1987).

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The variance for the total stock size estimate was derived as follows (Williams et al.,

2002a):

ˆ

ˆ1

ˆ

ˆˆ)ˆ(

2

2

2

nN

NSENNSE

dist

disttotaltotal

Log-normal 95% confidence intervals were calculated with a lower limit of

CNN totaltotalL /ˆˆ and upper limit of C ˆˆ xNN totaltotal

L NtotalL = NtotalxC,

(Burnham et al., 1987) where:

2

ˆ

)ˆ(1ln96.1exp

total

total

N

NSEC

3.4 Results

3.4.1 Effort and summary statistics

From September 2010 to August 2011, photo-identification surveys were carried

out for a total of 132 days (> 1,150 hours of effort; > 100,000 dorsal fin images) in

the four bays. More than 32,000 images were of sufficient quality to be added to

the catalogue, from which 607, D1 and D2 individuals were identified and contained

214 highly distinctive, D1, individuals.

Seventy-six percent of individuals were photographed on more than one occasion,

with one individual photographed as many as 18 times (Figure 3.2). On average,

individual spinner dolphins were photographed on four (SE±0.14) occasions during

the study period (Table 3-1). A cumulative discovery curve (Figure 3.3) indicated

that the identification of new individuals was reaching a plateau before the end of

the study period, with few new dolphins identified after 120 days of effort. Resting

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bay usage of individual spinner dolphins varied, in that some individuals were only

photographed in one resting bay, while others were observed in all four resting

bays (Figure 3.2).

Figure 3.2 Frequency of individual spinner dolphin sightings from September 2010 to August 2011.

Table 3-1 Number of photographic identification surveys, hours in each bay, spinner dolphin encounters in four resting bays along the Kona Coast of Hawaii Island from September 2010 to August 2011.

Location Surveys

Total

survey hours

Hours dolphins absent

Hours dolphins present

Photo-id hours

Group encounter

rate %

Mean group size

(±SE)

Min group size

Max group size

Kauhako Bay 44 407 257 150 28 39 29±3 8 50 Honaunau Bay 22 195 116 79 16 41 24±4 6 40 Kealakekua Bay 44 397 171 226 52 52 41±6 5 110 Makako bay 22 198 56 142 32 73 102±17 25 250 Study Area 132 1197 600 597 128 49 49±6 5 250

145

96

82

55 49

37 37 27

21 19 19 9

3 4 1 1 1 1 0

20

40

60

80

100

120

140

160

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18

Nu

mb

er

of

ind

ivid

ua

ls

Number of sightings

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Figure 3.3 Cumulative discovery curve of highly distinctive (D1) and distinctive (D2) Hawaiian spinner dolphins during 132 photographic identification surveys in the study area (all four bays combined) from September 2010 to August 2011.

Figure 3.4 The combination of bays in which individual spinner dolphins have been sighted from September 2010 to August 2011. A = Kauhako Bay, B = Honaunau Bay, C = Kealakekua Bay and D = Makako Bay.

3.4.2 Mark rate of the stock

To calculate the proportion of highly distinct individuals using the first independent

measure, over 100,000 photographic images were randomly taken of spinner

0

100

200

300

400

500

600

700

0 12 24 36 48 60 72 84 96 108 120 132

Ind

ivid

ua

ls

Surveys

D1D1 & D2

90% 95%

90% 95%

22 8

47

243

7

35 15

5 16

85

18 9

35 25

37

0

50

100

150

200

250

300

A B C D AB AC AD BC BD CD ABC ABD ACD BCD ABCD

Ind

ivid

ual

s

Bay combinations

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dolphins encountered in groups that comprised > 20 individuals. Of these, 40,715

high-quality photographs contained distinctive and non-distinctive spinner dolphin

dorsal fins. From the 40,715 high-quality photographs, 32,519 photographs

contained distinctive individuals graded as D1 or D2, and 14,405 were of highly

distinctive individuals graded as D1. Therefore, the first independent measure

estimating the proportion of identifiable individuals ( 1 ) in the stock produced a

mark rate of 35%:

SE 0.02 35.0715,40

405,14ˆ1

Of all the 65 groups encountered, a total of 14 groups comprised ≤ 20 dolphins.

There were a total of 168 individual spinner dolphins encountered within these

groups. Of these, 132 were distinctive individuals and 60 were highly distinctive D1.

Thus, the second independent measure estimating the proportion of identifiable

individuals (2 ) in the stock produced a mark rate of 36%:

SE 0.03 36.0168

60ˆ2

A Z-test showed that the two estimates were not significantly different (p=0.68),

the first value was used in all subsequent adjustments.

3.4.3 Apparent survival and total stock abundance

The goodness of fit test to the open model did not suggest the presence of over-

dispersion χ2 =27, df=26, p=0.4275, and ĉ=χ2/df=1.04. The abundance estimate of

distinct individuals and a range of closed and open models are presented in Table

3-2. In all cases the estimates are very close to 214, the number of distinct animals

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seen, because the capture probabilities were very high (approx. 0.40 per period),

consequently almost all animals were captured by the end of the study. This can

also be seen by the flatness of the discovery curve (Figure 3.4). The closed and open

models were very similar because I found that the annual apparent survival rate

was 0.97±0.05 SE which is not significantly less than 1. As heterogeneity and time

variation are strongly indicated for these data I used the estimate based on Mth

221±4.3 SE resulting in a total estimate of 631±60.1 SE (95% CI 524-761) spinner

dolphins in the Hawaii Island stock (Table 3-3).

Table 3-2 Highly distinctive (D1) population abundance estimates calculated from open and closed mark recapture models.

Open Model Estimate of highly distinctive

individuals (D1)

Closed Models Estimate of highly distinctive

individuals (D1)

POPAN φ(t) ρ(t) β(t) 219±2.9 SE M0 214±0 SE Mt 214±0 SE Mh Jacknife 226±5.69 SE Mh Chao 221±4.32 SE Mth Chao 221±4.32 SE

Closed models: M0 = equal capture probability, Mt= variation in capture probability

over time, Mh=individual heterogeneity of capture probability and Mth= variation in

capture probability over time with individual heterogeneity of capture probability.

Table 3-3 Mark rates and abundance estimates from this study and previous studies.

Study Mark rate Marked

individuals Total stock estimate

This study 1 =35% and 2 =36%

214 631± 60.1 SE (95% CI 524-761)

(Norris et al., 1994) 20% 192 960 (Ostman, 1994) 29% 677 2,334 (Ostman-Lind et al., 2004)

21.7% and 25.4% 217 1,001 and 855

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3.4.4 Discussion

This present study is the first concerted effort to estimate abundance and apparent

survival rate estimates for the Hawaii Island spinner dolphin stock. Two key

conclusions can be drawn from this study that have implications for the

management of this stock. Firstly, my systematic sampling approach and

capture/recapture analyses produced an apparent yearly survival estimate of

0.97±0.05 SE for this stock of spinner dolphins. Apparent survival represents the

product of true survival and permanent emigration. Therefore, if permanent

emigration approaches zero, apparent survival can be representative of true

survival. The Hawaii Island spinner dolphin stock is the most genetically distinct of

the five island associated stocks (Andrews et al., 2010, Carretta et al., 2013).

Therefore, permanent emigration of the Hawaii Island stock could be assumed to

be zero and consequently apparent survival is representative of true survival for the

stock. Secondly, my total abundance estimate for this stock 631±60.1 SE (95% CI

524-761) is lower than any previous published estimates, 960 (Norris et al., 1994) ,

2,334 (Ostman, 1994) and 855 – 1,001 (Ostman-Lind et al., 2004) (Table 3-3).

The approaches employed by previous studies to collect photographic identification

data to estimate abundance of Hawaiian spinner dolphins along the Kona Coast

were not designed for specific capture-recapture models (Ostman-Lind et al., 2004,

Norris et al., 1994, Ostman, 1994). These previous studies used opportunistic

photographic identification data retrospectively to estimate the population size. As

a consequence, effects due to the inherent characteristics of individual spinner

dolphins, and the variation in photographic identification effort throughout the

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study period weren’t allowed for. The proportion of distinctive individuals in these

previous abundance estimates was determined by dividing the ‘total number of

identified individuals’ by the ‘mean percentage of individuals identified per group.’

(Norris et al., 1994, Ostman-Lind et al., 2004, Ostman, 1994). Therefore, the

resulting abundance estimates did not take into account uncertainty or

heterogeneity of individual capture probabilities and the estimates of the

proportion of distinct animals were likely biased.

The systematic approach employed by this study was designed specifically to

determine spinner dolphin abundance estimates using capture-recapture models.

The consistent data collection effort throughout the study area and period (same

bays on the same dates each month) helped to eliminate biases associated with the

heterogeneity in capture probabilities due to the variation in individual

characteristics. The use of only the highly distinct (D1) individuals helped to

eliminate heterogeneity in capture probabilities due to variation in individual

distinctiveness, and furthermore reduced misidentification errors of individuals

during the identification process. Two independent methods used to determine the

proportion of distinctive individuals produced similar results (~36%). These

proportions are higher than reported in previous studies in the region (Ostman,

1994, Ostman-Lind et al., 2004, Norris et al., 1994). Advances in digital imaging

technology allowed for a greater number of spinner dolphin images to be taken,

compared to previous studies that relied on film photography and processing

(Norris and Dohl, 1980, Norris et al., 1994, Ostman, 1994, Ostman-Lind et al., 2004).

Furthermore, advances in technology allowed for high resolution dolphin images,

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which, in turn, allowed less-distinctive individuals to be identified and included in

the catalogue, more so than in previous studies that may have categorised the

same quality of photographs as non-distinctive, and as a consequence may have

contributed to the low proportion of distinctive individuals identified (Table 3-3).

As my study lasted for one year I expected that I would need to use an open

capture-recapture model. However, I found that closed population models gave

almost identical population estimates to the open models. I think the population is

approximately closed for two reasons. First, the Hawaii Island spinner dolphin stock

is genetically distinct from the other island associated spinner dolphin stocks in the

Hawaiian archipelago (Andrews et al., 2010), which is strong evidence for there

being little movement in or out of this area. In fact, evidence from recent genetic

work indicates that spinner dolphins inhabiting the Kona Coast of Hawaii Island

exhibit a greater degree of philopatry than any other spinner dolphin stock in the

Main Hawaiian Islands (Andrews et al., 2010). Second, spinner dolphins are long-

lived animals with an estimated annual survival rate of 0.97±0.05 SE and even

though a shift in spinner dolphin sighting distribution from the leeward side to the

windward side of Hawaii Island has been documented (Norris et al., 1994), this shift

was for only one month (a lot shorter than my sampling period), after which it

shifted back to the leeward side (Norris et al., 1994) and would be included in our

closed population estimate. Therefore no significant new recruits would be

expected to enter the population in just one year. As heterogeneity and time

variation of capture probabilities are strongly suggested I decided to use the

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abundance estimate based on the closed model Mth. However, in this case the

estimates of all the models are almost identical (Table 3-2).

Bias can also be introduced into abundance estimates from misidentification of

individuals. This can occur in two ways: one individual being identified as two

individuals (positive bias) and two individuals being identified as one individual

(negative bias). In this study only highly distinctive spinner dolphins were used

which helps to mitigate the introduction of bias from individual misidentification.

The photographic identification of individuals for survival rates and abundance

estimates was undertaken across the four major resting bays along the Kona Coast

but did not survey the entire coastline of Hawaii Island. It is possible that the

abundance estimate of this stock underestimates the whole Kona Coast spinner

dolphin population. However, I suspect that any potential underestimation is

insignificant and that almost all members of the population use these four main

resting bays. Earlier studies documented spinner dolphins on the windward side of

Hawaii Island (Norris et al., 1994), however, it is unlikely that this represents prime

resting habitat for them given results on habitat preference studies (Thorne et al.,

2012). Earlier studies also observed individual spinner dolphins moving from the

north to the south of the Kona Coast encompassing the four main resting bays of

this study (Norris et al., 1994, Ostman, 1994, Ostman-Lind et al., 2004). In addition,

radio tagged individual spinner dolphins have been observed travelling 20 – 70 km

along the Kona Coast (Norris et al., 1994). This study is part of a larger project

(SAPPHIRE) in which spinner dolphin group focal follows were also undertaken

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outside, and to the north and south of the four resting bays. Individual spinner

dolphins observed during these focal follows were also observed in at least one of

the four main resting bays during our photographic identification (Tyne, J.A,

unpublished data). This suggests our work sampled the entire population of the

Hawaii Island stock (Andrews et al., 2010, Carretta et al., 2013).

3.4.5 Management implications

The dolphin-watch tourism industry in Kona has increased over the past 20 years

(Hu et al., 2009), paralleling the dramatic increase in the industry worldwide

(O'Connor et al., 2009). Recent short-term research has suggested that an increase

in human traffic inside and outside of the dolphin resting habitats (Ostman-Lind et

al., 2004, Courbis and Timmel, 2009, Timmel et al., 2008) resulted in dolphins

spending less time in these resting habitats (e.g. Ostman-Lind et al., 2004) and that

their resting behaviour was interrupted as a consequence. It has been suggested

that spinner dolphins may leave the bays in direct response to human interactions

(Courbis and Timmel, 2009, Timmel et al., 2008, Delfour, 2007, Ostman-Lind, 2008).

However, it was not possible to identify population level effects from these short-

term studies. Elsewhere, dolphin-human interactions have had detrimental effects

on the focal population. In New Zealand, the resting behaviour of bottlenose

dolphins decreased as the number of boats increased in the Bay of Islands

(Constantine et al., 2004) and in Milford Sound (Lusseau et al., 2006). In Shark Bay,

Western Australia, long-term exposure to dolphin-watch vessels caused declines in

relative abundance of bottlenose dolphins in an area where boat-based tourism

occurred (Bejder et al., 2006b).

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Due to growing concerns, the United States National Oceanic and Atmospheric

Administration’s Fisheries Service Pacific Islands Regional Office, in conjunction with

the Pacific Islands Fisheries Science Centre, published a Notice of Intent (NOAA,

2005) to prepare an Environmental Impact Statement assessing potential impacts

of a proposed rulemaking on human activity. The proposed rule seeks to implement

time-area closures in specific spinner dolphin resting habitat to reduce the

cumulative exposure to human activity along the Kona Coast of Hawaii Island

(NOAA, 2005).

The rigorous systematic sampling during this study produced the first baseline

estimates of abundance and apparent survival rates for the Hawaii Island spinner

dolphin stock. These estimates can provide valuable assistance to management

agencies, for comparison with historical estimates and to assess the effectiveness of

future management actions seeking to mitigate negative human-dolphin

interactions. The current estimate of 631 (95% CI 524-761) is substantially lower

than previous abundance estimates (Table 3-3). When this estimate is combined

with the rigid daily behavioural pattern of spinner dolphins, the genetic

distinctiveness of the stock and the ease of human access to the spinner dolphins in

their preferred resting habitats, this stock is likely more vulnerable to negative

impacts from human disturbance than previously believed.

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4 Informing monitoring programs to detect trends in abundance of cetacean populations: a case study focussing on the Hawaii Island spinner dolphin (Stenella longirostris) stock.

4.1 Abstract

Cetaceans are long-lived, and their slow growth rates and low fecundity present

challenges for developing effective monitoring programs. Rigorous sampling

designs are required to produce precise and unbiased population estimates needed

to detect changes in abundance. Currently, data are not available on the trends in

abundance for any spinner dolphin stock in the Hawaiian archipelago, which is

hampering conservation and management efforts to identify potential impacts. Two

consecutive estimates were made for the stock size and survival of the Hawaii

Island spinner dolphin (Stenella longirostris). These data were used to determine

the ability of three different sampling scenarios to detect a change in abundance by

varying the effort, precision, power and interval between abundance estimates for

each scenario. The first scenario represented the same sampling effort used to

obtain annual abundance estimates for two consecutive years and consisted of

monthly surveys, each of 12 days within four spinner dolphin resting bays. Sampling

effort was reduced by 50% in Scenarios 2 and 3. Specifically, Scenario 2 consisted of

six sampling days per month randomly subsampled from Scenario 1 across all four

bays; and Scenario 3 consisted of six sampling days per month in two specific bays.

Scenario 1 produced the most precise annual abundance estimate of 668 ± 62 SE

(95% CI = 556-801; CV=0.09) individuals, consistent with my previously published

estimate (Chapter 3; Tyne et al., 2014a). The precision of annual abundance

estimates under Scenarios 2 and 3 were slightly less than Scenario 1 with

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coefficients of variation of 0.11 and 0.10, respectively. With power set at 80% and

95%, and at a precision of 0.09, it would take nine and 12 years, respectively, to

detect a 5% change in abundance under Scenario 1. If the change in abundance was

a decline, then the population would have decreased by 37% and 46% respectively.

In light of the time duration to detect change and the potential for a large

population decline prior to detection, the precautionary principle suggests that the

lower power level should be used as an indicator for management intervention.

These results provide management with guidelines for evaluating sampling

programs of different intensity and estimate the time required to detect a change

(decline/increase) in the stock. Furthermore, results also provide information for

designing sampling programs to evaluate the efficacy of management interventions

(time-area closures) that aim to reduce the number and intensity of human-dolphin

interactions.

4.2 Introduction

Management decisions for the conservation of marine fauna should be based on

sound scientific investigations and rigorous monitoring regimes, particularly for

those populations whose viability is threatened (Jaramillo-Legorreta et al., 2007,

Turvey et al., 2007). However, the allocation of scarce funding resources is a

perennial problem in conservation biology (Williams and Thomas, 2009, Williams et

al., 2011). As a compromise, managers must cut costs of research and lower the

burden of proof that a population is in decline before introducing a mitigation

approach (Williams and Thomas, 2009, Williams et al., 2011). Under such

circumstances long-lived animals are a management challenge, as their slow growth

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rate and low fecundity can lead to slow recovery from disturbance (Congdon et al.,

1993). These species also require long-term monitoring strategies (Clutton-Brock

and Sheldon, 2010, Magurran et al., 2010) to detect small rates of change which are

hard to detect which means that populations may be reduced to low levels before

management can intervene (Taylor and Gerrodette, 1993, Taylor et al., 2007,

Gerrodette, 1987, Thompson et al., 2000, Wilson et al., 1999).

Population monitoring programs designed to detect change and determine

management actions require development to provide precise and unbiased

estimates of population parameters (Taylor and Gerrodette, 1993, Taylor et al.,

2007). Therefore, they must be designed to satisfy assumptions of the estimation

methods being used to be unbiased and have sufficient sampling effort to produce

precise population estimates (Wilson et al., 1999, Thompson et al., 2000). The

correct identification of individuals within a population is also important for

ensuring that capture-recapture estimates are reliable. Sampling programs that

estimate population abundance at different time intervals can inform on trends in

abundance (Gerrodette, 1987, Taylor and Gerrodette, 1993, Thompson et al., 2000,

Wilson et al., 1999). The power to detect trends in abundance through time

depends on the relationship between the rate of change in the population, the

precision of the population estimate (e.g., coefficient of variation) and the

acceptable levels of making errors to detect change (Type I (α) and Type II (β)

errors). Variations in these parameters can then determine the power to detect

trends in abundance of proposed monitoring programs and provide a scientific

basis for the level of precaution required to address management issues.

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The U.S National Oceanic and Atmospheric Administration (NOAA) has the mandate

under the Marine Mammal Protection Act 1972 (MMPA) to protect all cetaceans,

seals and sea lions in US waters and the National Marine Fisheries Service (NMFS)

and the U.S. Fish and Wildlife Service (USFWS) have the responsibility for assessing

the stocks of cetaceans and pinnipeds. The frequency of stock assessments depends

on the classification of the stock: strategic stocks require annual stock reviews,

while non-strategic stocks require reviews every three years or when new

information becomes available (Carretta et al., 2013). A strategic stock is defined

under the MMPA as a marine mammal stock “(A) for which the level of direct

human-caused mortality exceeds the potential biological removal level; (B) which,

based on the best available scientific information, is declining and is likely to be

listed as a threatened species under the Endangered Species Act (ESA) within the

foreseeable future; or (C) which is listed as threatened or endangered under the

ESA, or is designated as depleted under the MMPA.” Currently, Hawaiian spinner

dolphins (Stenella longirostris) are not listed as threatened, endangered or

depleted. Furthermore, the levels of serious injury and mortality due to

anthropogenic causes does not exceed the Potential Biological Removal (PBR) level

for the stock. Therefore are classified as a non-strategic stock (MMPA, 1972).

In Hawaii, spinner dolphins live in small (Chapter 3; Tyne et al., 2014a), isolated

stocks with restricted ranges (Andrews et al., 2010) and have evolved a specialised

behavioural ecology (Norris and Dohl, 1980). They forage cooperatively offshore at

night, and return to sheltered bays to socialise and rest during the day (Norris and

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Dohl, 1980, Norris et al., 1994, Benoit-Bird and Au, 2009, Chapter 5; Tyne et al.,

2015). This temporal partitioning of behaviours allows spinner dolphins to maximize

their foraging efficiency, while avoiding predation during periods of recovery from

the exertions of their night time foraging bouts (Johnston, 2014). However, the

resting time of spinner dolphins in sheltered bays overlaps almost completely with

the times when humans use the bays for tourism, recreational and subsistence

purposes (Heenehan et al., 2015). Some of these activities, in particular nature-

based tourism, engage in repeated, close-up encounters with dolphins on a daily

basis (Chapter 6; Heenehan et al., 2015).

These close-up encounters may have negative consequences for spinner dolphins,

as recent research shows that dolphins are less likely to rest when swimmers

approach within 150 m (Symons et al. University of Aberdeen unpublished data). It

has been suggested that repeated approaches to dolphins interrupt their resting

behaviour and, as in response, dolphins spend less time in resting bays (Courbis and

Timmel, 2009, Timmel et al., 2008, Delfour, 2007). Thus, human activities may

adversely impact on the overall resting budget of dolphins (Chapter 5: Tyne et al.,

2015), which, in turn, may cause rest deprivation and affect energetic budgets

(Williams et al., 2006) and ultimately impact their reproductive success (National

Research Council, 2005). As such, concerns have been raised regarding the possible

effects that human-dolphin interactions are having on the spinner dolphins (Danil et

al., 2005, Courbis and Timmel, 2009). Consequently, NOAA are looking to

implement a management strategy to reduce the number and intensity of human-

dolphin interactions in Hawaii (NOAA, 2005). One strategy under consideration is

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the implementation of time-area closures in the preferred resting habitats of the

dolphins during their resting periods (NOAA, 2005). Currently, data are not available

on the trends in abundance for any spinner dolphin stock in the Hawaiian

archipelago (Carretta et al., 2013). This lack of scientific data is hampering

conservation and management efforts to identify potential impacts on Hawaiian

spinner dolphin stocks.

In the current study, I first provide a second consecutive annual abundance and

survival estimate of the Hawaii Island spinner dolphin stock to examine the

variation between years. Next, three scenarios with different levels of sampling

effort were designed based on the systematic approach employed in Chapter 3

(also Tyne et al. (2014a)). Finally, the ability of sampling scenarios to detect trends

in abundance was investigated by varying sampling effort, rate of change in

abundance, precision, power and interval between annual abundance estimates.

The results provide management with guidelines for evaluating sampling programs

of different intensity and estimate the time required to detect a trend

(decline/increase) in the population. The results also provide fundamental

information for designing sampling programs to evaluate the efficacy of

management interventions (time-area closures) that are designed to reduce the

number and intensity of human-dolphin interactions.

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4.3 Materials and methods

4.3.1 Fieldwork

The Hawaiian archipelago is located approximately 3,200 km southwest of

mainland United States. Hawaii Island is the largest, youngest and most southerly of

the main Hawaiian Islands. On the leeward (west) side of the island is the Kona

Coast, where four important dolphin resting bays are located: Makako Bay,

Kealakekua Bay, Honaunau Bay and Kauhako Bay (Figure 4.1); (Norris et al., 1994,

Thorne et al., 2012, Chapter 3; Tyne et al., 2014a, Chapter 5; Tyne et al., 2015).

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Figure 4.1 Map of the study area illustrating the four spinner dolphin resting bays, Makako Bay, Kealakekua Bay, Honaunau Bay and Kauhako Bay, along the Kona Coast of Hawaii Island.

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4.3.2 Sampling design

From September 2010–August 2012, boat-based photographic-identification was

carried out in four resting bays of the Hawaii Island spinner dolphin stock using the

systematic sampling design presented in Chapter 3; Tyne et al. (2014a). Each bay

was sampled on the same dates each month, regardless of whether dolphins were

present or absent, thus providing consistent and even effort throughout the study

period and area. This design (Scenario 1) consisted of 12 consecutive sampling days

each month for each of the two study years. Two additional sampling regimes of

reduced intensity (Scenarios 2 and 3) were evaluated against Scenario 1.

Abundance was estimated for each year and was based on twelve months of

sampling effort for each scenario.

4.3.3 Sampling effort

Scenario 1 consisted of monthly sampling over 12 consecutive days of photo-

identification covering four bays: two days in Makako Bay, four days in Kealakekua

Bay, two days in Honaunau Bay and four days in Kauhako Bay. Scenarios 2 and 3

each had a 50% reduction in sampling effort (i.e. six days of sampling each month).

The sampling effort in each of the three scenarios was:

Scenario 1 – 12 sampling days per month across four bays.

Scenario 2 – six sampling days per month, spread across the four bays, with

the days chosen by randomly selecting half the number of days from each

bay in Scenario 1.

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Scenario 3 – six sampling days per month, across two bays where dolphins

were encountered most frequently (two days in Makako Bay and four days

in Kealakekua Bay).

4.4 Analyses

4.4.1 Capture-recapture

All photographs were graded according to photographic quality and distinctiveness

to minimise the introduction of bias and to reduce misidentification (Urian et al.,

2015). Only highly distinctive (D1) fins in photographs of excellent and good quality

were included in the capture-recapture analyses (Urian et al., 2015, Gowans and

Whitehead, 2001, Nicholson et al., 2012). A capture was defined as a photograph of

sufficient quality of an individual dolphin’s distinctly marked dorsal fin. Capture

histories corresponded to whether or not an individual dolphin was “captured” or

“recaptured” during a sampling occasion. This information was compiled for each

individual (calves excluded) after a photo-grading process. See Chapter 3; Tyne et

al. (2014a) for more detail on the photo-grading process.

For both years, open and closed capture-recapture models in the program MARK

(White and Burnham, 1999) were applied to the photo-identification data to

estimate stock size, variability and evaluate the goodness-of-fit of the models. See

Chapter 3; Tyne et al. (2014a) for full details on modelling approach. The POPAN

approach is able to estimate probabilities of entry (immigration) and probabilities

of exit (emigration and mortality), to and from the study area between sampling

occasions (Schwartz and Arnason, 1996). Under Scenario 2, capture histories of

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individual dolphins were created based on six days subsampled 100 times from

Scenario 1. Capture-recapture modelling was then applied to each of the 100

spinner dolphin capture histories. Annual abundance estimates, apparent survival

and overdispersion were each calculated from the mean of the 100 abundance

estimates, survival rates and overdispersion (ĉ=χ2/df) for each year. Standard errors

(SE) for both the annual abundance estimates and survival rates were then

calculated from the standard deviation of the empirical sampling distributions of

the estimates.

All capture-recapture models make the following assumptions (Williams et al.,

2002a): 1) marks are not lost during the study; 2) marks are correctly recognised on

recapture; 3) individuals are instantly released after being marked; 4) intervals

between sampling occasions are longer than the duration of a sample; 5) all

individuals observed during a given sampling occasion have the same probability of

surviving until the next one; 6) study area does not vary; and 7) homogeneity of

capture probabilities, i.e. that all animals in a sampling occasion have equal

probability of being captured. These assumptions are relaxed for certain models

that allow heterogeneity in the capture probabilities. See Chapter 3; Tyne et al.

(2014a) for more detail on the methods used to estimate abundance, mark rate and

total stock size. To determine whether data were overdispersed (when the variance

is greater than the mean (Cox, 1983)), the inflation factor (ĉ) was calculated for the

abundance estimates (Anderson et al., 1994) and Quasi-likelihood adjustments

were applied to models take over-dispersion into account.

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4.4.2 Detecting change in abundance

Detecting significant change in abundance over time requires that the null

hypothesis (H0) of no change in abundance is rejected. The probability of detecting

a significant change in abundance when one doesn’t exist, i.e., the Type I error, is

generally set at α = 0.05, which is policy in the United States (Taylor et al., 2007).

However, even when H0 is not rejected, it is possible that the abundance has

changed, i.e., a Type II error is present. Power analysis can be used to identify the

ability of sampling regimes to adequately detect trends in abundance and to

minimise the probability of Type II errors occurring (Gerrodette, 1987). The ability

of three scenarios to detect change in abundance was investigated using

Gerrodette’s (1987) inequality model:

Where 𝑟 = the rate of population change, 𝑛 = the number of estimates, 𝐶𝑉 = the

coefficient of variation of the abundance estimate (a measure of precision), 𝑍𝛼 =

normal deviate corresponding to the probability of making a Type I error, 𝑍𝛽= normal

deviate corresponding to the probability of making a Type II error, α = the one-tailed

probability of making a Type I error and β = the probability of making a Type II

error. The probability of making a Type I error (α) was set at 0.05, and the r

probability of making a Type II error (β) was set at 0.05 (i.e., power = 1 – β = 0.95)

and 0.20 (power = 0.80).

The mean CVs obtained from the two annual abundance estimates from each

sampling scenario were used to investigate the number of years required to detect

𝑟2𝑛3 ≥ 12𝐶𝑉2(𝑍𝛼/2 + 𝑍𝛽)2

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varying rates of change (1 to 20%) in abundance at 80% and 95% power. A range of

CVs (5% to 20%) were then used to determine the number of years required to

detect 5% and 10% change in abundance at 80% and 95% power. Finally, I

examined the number of years it would take to detect a 5% change in abundance

under the three scenarios.

4.5 Results

4.5.1 Effort and summary statistics

A total of 276 days (> 2,350 hours of on-water effort) of photo-identification was

carried out in the four bays between September 2010 and August 2012.

Approximately 4,000 h of effort was required to identify and grade the individual

spinner dolphins from the more than 200,000 images. More than 64,500 of these

images were of sufficient quality to be added to a photo-identification catalogue in

which 235 highly distinctive individuals (D1) were identified. The identification of

new individuals reached a plateau before the end of the two-year study period

(August 2012, on sampling day 276), with 211 dolphins (90%) identified after 114

sampling days (July 2011) and 223 (95%) after 187 sampling days (February 2012,

Figure 4.2).

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Figure 4.2 Cumulative discovery curve of highly distinctive (D1) spinner dolphins during 276 photographic identification sampling days from September 2010 to August 2012. Short vertical lines indicate when 90% and 95% of the highly distinctive individuals had been identified. Long vertical dashed line indicates 12 months of sampling.

4.5.2 Estimates of apparent survival rate and stock abundance

Apparent survival is the probability of surviving and staying in the study area and

represents the product of true survival and permanent emigration. The two

independent yearly apparent survival rates estimated under Scenario 1 were

identical (0.97, Table 4-1). With the 50% reduction in sampling, the estimated

survival rates for Scenario 2 and 3 were higher in 2011 than 2012 (0.2 and 0.08

higher for Scenarios 2 and 3, respectively). The abundance estimates were higher in

2012 than 2011 for all three scenarios. Although the abundance estimates were

more precise from Scenario 1 (CV = 0.09), there was very little difference in

precision between the three scenarios (Scenarios 2 and 3, CV = 0.10 and 0.11). The

goodness-of-fit measure (ĉ=χ2/df) suggested that the data were over-dispersed for

two of the six estimates (Scenarios 1 and 2 in 2012) (Table 4-1).

0

50

100

150

200

250

0 12 24 36 48 60 72 84 96 108 120 132 144 156 168 180 192 204 216 228 240 252 264 276

Ind

ivid

ual

s

Sampling day

90% 95%

Year 1 Year 2

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Table 4-1 Apparent survival, abundance, over-dispersion and coefficient of variation calculated for the different sampling scenarios and capture-recapture models. Scenario 1 = 12 days of sampling covering four bays (two days in Makako Bay, four days in Kealakekua Bay, two days in Honaunau Bay and four days in Kauhako Bay), Scenario 2 = six days randomly subsampled from the 12 days covering four bays (one day in Makako Bay, two days in Kealakekua Bay, one day in Honaunau Bay and two days in Kauhako Bay) and Scenario 3 = six days covering two bays (two days in Makako Bay and four days in Kealakekua Bay). SE = standard error, CI = 95% confidence interval, ĉ = over-dispersion. 1estimates from Chapter 3; Tyne et al. (2014)

4.5.3 Detecting change in abundance

From the three sampling scenarios, the number of abundance estimates required to

detect a change in the dolphin stock decreased as the rate of change increased

(Figure 4.3). For example, at a CV of 0.10 and a 5% rate of change at 95% power,

nine abundance estimates are needed to detect change, compared with five

abundance estimates to detect a 10% change (Figure 4.3). Furthermore, as the

precision decreased (i.e., CV increase), the time necessary to detect a change

increased (Figure 4.4).

Scenario, effort Year Apparent survival rate

Total abundance ± 1 SE (95% CI) ĉ CV

1: 12 d, 4 bays 2011 0.97 ± 0.05SE 631 ± 60 (524-761) 1.4 0.09 2012 0.97 ± 0.05SE 668 ± 62 (556-801) 1.5 0.09

2: 6 d, 4 bays

2011 0.88 ± 0.10SE 552 ± 57 (450-678) 1.4 0.11 2012 0.68 ± 0.09SE 632 ± 62 (522-766) 1.7 0.11

3: 6 d, 2 bays 2011 0.92 ± 0.07SE 557 ± 56 (458-678) 1.1 0.10

2012 0.84 ± 0.08SE 659 ± 64 (545-796) 1.2 0.10

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Figure 4.3 Number of annual abundance estimates required to detect various rates of change in stock size at varying levels of precision (coefficient of variation, CV) from three sampling scenarios. Scenario 1 = 12 days of sampling covering four bays (two days in Makako Bay, four days in Kealakekua Bay, two days in Honaunau Bay and four days in Kauhako Bay), Scenario 2 = six days randomly subsampled from the 12 days covering four bays (one day in Makako Bay, two days in Kealakekua Bay, one day in Honaunau Bay and two days in Kauhako Bay) and Scenario 3 = six days covering two bays (two days in Makako Bay and four days in Kealakekua Bay). Type I error (α) probabilities were set at 0.05 and Type II error (β) probabilities were set at power = 1 – β = 0.95 (dark) and 1 – β = 0.80 (grey).

0

2

4

6

8

10

12

0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

An

nu

al a

bu

nd

ance

est

imat

es

Rate of population change (%)

S1 = 0.09

S2 = 0.10

S3 = 0.11

S1 = 0.09

S2 = 0.10

S3 = 0.11

1 – β = 0.95

1 – β = 0.80

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Figure 4.4 Predicted time it would take to detect an annual change of 5% and 10% with varying levels of precision (coefficient of variation, CV) using monitoring intervals of one year and three years. Type I error (α) probabilities were set at 0.05 and Type II error (β) probabilities were set at power = 1 – β = 0.80 (grey) and power = 1 – β = 0.95 (dark).

Of the three scenarios, annual abundance estimates from the most intensive

sampling scenario (Scenario 1) were the most precise (CV = 0.09; Table 4-2). Under

Scenario 1, it would take seven annual abundance estimates over six years to detect

a 5 % annual change (decline/increase) with 80% power. Under the same scenario,

it would take eight annual abundance estimates over seven years to detect a 5 %

change with 95% power (Table 4-2). As the time interval between abundance

estimates increased from one to three years, the number of abundance estimates

required to detect a change decreased, but the time taken to detect a change

increased (Table 4-2). This is due to the increase in the effective percentage change

in abundance per interval (Gerrodette, 1987, Wilson et al., 1999). To detect an

0

5

10

15

20

25

5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

Year

s to

det

ecti

on

Level of precision (coefficient of variation)

Yearly at 5% Yearly at 10% 3 Yearly at 5% 3 Yearly at 10%

Yearly at 5% Yearly at 10% 3 Yearly at 5% 3 Yearly at 10%

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annual 5% change at 80% and 95% power, it would take four and five abundance

estimates (at three year intervals), over nine and 12 years respectively. If the

change was a continuous decline, the abundance would have declined by 37% and

46% by the time of detection, equivalent to a decline from 668 ± 62 SE (95% CI 556-

801) to 433 and 372. If the change in abundance was an increase, the abundance

estimate would have increased by 55% (1,035) and 80% (1,202) at the time of

detection.

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Table 4-2 Number of annual abundance estimates, effective percentage change, years to detection, total percentage change at detection, at varying degrees of precision, to detect an annual 5% change (decline/increase) in abundance between one, two and three year monitoring intervals based on Scenario 1 = 12 days of sampling covering four bays (two days in Makako Bay, four days in Kealakekua Bay, two days in Honaunau Bay and four days in Kauhako Bay), Scenario 2 = six days randomly subsampled from the 12 days covering four bays (one day in Makako Bay, two days in Kealakekua Bay, one day in Honaunau Bay and two days in Kauhako Bay) and Scenario 3 = six days covering two bays (two days in Makako Bay and four days in Kealakekua Bay). Probability of a Type I Error (α = 0.05) and a Type II Error (1 – β = 0.95 and 1 – β = 0.80). CV = coefficient of variation.

Power

CV

Monitoring interval (years) (t)

Annual abundance estimates (n)

Effective % decline per interval t (0.95t – 1)

Effective % increase per interval t (1.05t – 1)

Years to detection (t(n-1))

Total % decline at detection (0.95t(n-1) – 1)

Total % increase at detection (1.05t(n-1) – 1)

0.80 0.09 1 7 -5 5 6 -26 34 0.09 2 5 -9.8 10.3 8 -34 48 0.09 3 4 -14.3 15.8 9 -37 55

0.95 0.09 1 8 -5 5 7 -30 41 0.09 2 6 -9.8 10.3 10 -40 63 0.09 3 5 -14.3 15.8 12 -46 80

0.80 0.10 1 7 -5 5 6 -26 34 0.10 2 5 -9.8 10.3 8 -34 48 0.10 3 4 -14.3 15.8 9 -37 55

0.95 0.10 1 9 -5 5 8 -34 48 0.10 2 7 -9.8 10.3 12 -46 80 0.10 3 6 -14.3 15.8 15 -54 110

0.80 0.11 1 8 -5 5 7 -30 41 0.11 2 6 -9.8 10.3 10 -40 63 0.11 3 5 -14.3 15.8 12 -46 80

0.95 0.11 1 9 -5 5 8 -34 48 0.11 2 7 -9.8 10.3 12 -46 80 0.11 3 6 -14.3 15.8 15 -54 110

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4.6 Discussion

In this chapter I aimed to estimate the abundance and survival of Hawaii Island

spinner dolphins in consecutive years and model the ability of different sampling

scenarios to detect change in abundance over time. Two main findings emerged

from this research. Firstly, the additional survival rate and abundance estimate of

the Hawaii Island spinner dolphin stock are virtually identical to those from the first

year (Chapter 3; Tyne et al., 2014a), suggesting that the sampling design in

combination with capture-recapture models is rigorous and that the estimates from

the first year are reliable. Secondly, although there was little difference in the

precision between sampling scenarios, the sampling effort affects the ability of the

sampling regime to detect a trend in abundance over time. These results provide a

scientific basis for the level of precaution required to address management issues.

4.6.1 Estimates of survival rates and abundance

The systematic sampling approach developed in Chapter 3; Tyne et al. (2014a) was

designed specifically to estimate the abundance of the Hawaii Island spinner

dolphin stock. In the present study, it was used as the basis for investigating the

ability of three different sampling scenarios to detect a change in abundance over

time. The most intensive sampling effort (Scenario 1 with 12 days each month in

four bays) produced the most precise annual abundance estimates. Both of the

other sampling scenarios, where sampling effort was reduced by 50%, gave lower

estimates of apparent survival rates and less precise abundance estimates.

However, the standard errors of Scenarios 2 and 3 were still similar to those of

Scenario 1. This is partly as a consequence of the mean number of days dolphin

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groups were encountered from Scenario 1 being the same number of days as half

the sampling effort reflected in Scenarios 2 and 3. The annual abundance estimates

in this study and in Chapter 3; Tyne et al. (2014a) are lower than any previous

estimates (Ostman, 1994, Ostman-Lind et al., 2004, Norris et al., 1994). However,

caution should be had when making comparisons as previous research efforts were

not specifically designed to estimate abundance. Consequently, it is not possible to

assess the current trend in population size of the Hawaiian spinner dolphins, except

to acknowledge that the stock is smaller than previously estimated.

4.6.2 Monitoring changes in dolphin abundance over time

The ability to confidently detect trends in abundance over time is critical when

making conservation decisions (Taylor and Gerrodette, 1993, Thompson et al.,

2000, Wilson et al., 1999). The current trend in abundance of the Hawaii Island

spinner dolphins is uncertain. Degrees of precision, power, sampling effort and

interval between abundance estimates were varied to evaluate the ability of three

sampling scenarios to detect change in abundance. As the sampling effort

increased, so did the precision of the abundance estimates, and thus changes in

abundance could be detected earlier. However, even at the most intensive

sampling effort (Scenario 1), with annual surveys and abundance estimates

assessed every three years at 95% power, the population of spinner dolphins may

have declined by 46% at the time when a significant trend is detected (i.e. from 688

to 372 individuals). This rate of decline is approximately 50% over 15 years, a rate

that has been defined as precipitous (Taylor et al., 2007) and could lead to the stock

being classed as ‘depleted’ under the MMPA (Taylor et al., 2007).

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4.6.3 Applications for monitoring

Hawaiian spinner dolphins are classed as a non-strategic stock under the MMPA

and under the current legislation, their abundance is assessed once every three

years (Carretta et al., 2013). NOAA are considering a management approach to

reduce the number and intensity of human-dolphin interactions in preferred resting

habitat of spinner dolphins, including the introduction of time-area closures of the

four spinner dolphin resting bays from this study (NOAA, 2005). If time-area

closures were introduced, a monitoring program to detect trends in dolphin

abundance would help evaluate the effectiveness of this management strategy.

If the rate of change in abundance is small, then precision will have a large effect on

the time needed to detect a change (Figure 3; see also Thompson et al., 2000,

Wilson et al., 1999, Taylor et al., 2007). The sampling effort for the most precise

sampling scenario in this study required a significant investment of time and field

personnel and for the processing of the dolphin photo-identification images. These

resources were only made possible through the presence of a dedicated PhD

student and large numbers of research assistants and significant financial and

logistical support. The chronic underfunding of monitoring programs (Williams and

Thomas, 2009, Williams et al., 2011), requires the careful consideration of

resources required to conduct an adequate follow-up photographic-identification

study of the spinner dolphin stock. Other considerations in the design of the

program include the rate of change in abundance and the confidence of detecting

significant change. By increasing power (confidence) to detect a change, both the

number of annual abundance estimates and study duration required will increase

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(Taylor et al., 2007, Gerrodette, 1987). The time taken to detect a decline can be

critical for small, genetically isolated stocks, such as those of the Hawaii Island

spinner dolphins (Thompson et al., 2000, Wilson et al., 1999). A precipitous decline

in abundance may have significant, negative biological consequences for this

spinner dolphin stock. Consideration of these factors is paramount, especially in

determining the level of precaution required to address management issues.

Most coastal cetacean populations are exposed to a range of human activities

(Chapter 6; Jefferson et al., 2009, Pirotta et al., 2015, Christiansen et al., 2010,

Lusseau et al., 2006, Lusseau et al., 2009, Bejder et al., 2006b, Constantine et al.,

2004), and each population has a diversity of issues to be considered when

developing and implementing an effective management strategy. This study

demonstrated that power analyses should be an integral part of a population

management strategy. The approach presented here is widely applicable and can

inform monitoring programs for populations (cetaceans and other fauna), where

individuals can be identified and estimates of population size can be made through

mark-recapture analyses. For example, in north Western Australia, oil and gas

resources are in great demand, infrastructure is expanding rapidly and shipping

activity is increasing dramatically (Allen et al., 2012, Bejder et al., 2012). Despite

this rapid development, little information is available on the characteristics of

cetacean populations in the region, which is hampering the assessment of their

conservation status, e.g. the Australian snubfin dolphin (Orcaella heinsohni) and

Australian humpback dolphins (Sousa sahelensis) (Brown et al., 2014, Allen et al.,

2012, Bejder et al., 2012). One of the biggest problems with a mark-recapture

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approach to estimate abundance is assigning the abundance estimate to a

particular geographic location. A number of state marine parks have been

proposed to protect important cetacean habitats in the region, e.g. the Camden

Sound Marine Park and Roebuck Bay Marine Park (Department of Parks and

Wildlife, 2013). The efficacy of these parks could be evaluated based on the

approach presented here, using spatially explicit capture-recapture methods

(Williams et al., 2014, Borchers and Efford, 2008) to assist in assigning abundance

estimates to a geographical area to be protected. More broadly, there are

currently 553 globally-established, marine mammal protected areas with an

additional 168 being considered for declaration (Hoyt, 2011, Chapter 2; Tyne et al.,

2014b). This study provides a template for developing sampling regimes and for

testing efficacy of marine protected areas that aim to increase cetacean

abundance.

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5 The importance of spinner dolphin (Stenella longirostris) resting habitat: Implications for management

5.1 Abstract

Linking key ecological characteristics with animal behaviour is essential for

identifying and protecting important habitats that support life functions. Spinner

dolphins display a predictable diurnal behavioural pattern where they forage

offshore at night and return to sheltered bays during daytime to rest. These bays,

which are also subject to considerable use by humans, have long been recognised

as key habitats for this species, however the extent to which dolphins rely on

specific characteristics of these habitats for rest has not been quantified. A novel

integration of boat-based and land-based group focal follow sampling regimes and

three gradient boosting Generalised Additive Models (GAMs) were developed to

identify habitat features that contribute to the occurrence of resting spinner

dolphins in coastal waters off Hawaii Island. Two ‘in-bay’ models used data

collected within-in bays and a third ‘coastal’ model (near-shore, outside of bays)

used data collected both inside and outside of bays.The coastal model identified

that spinner dolphins were unlikely to rest outside sheltered bays. In-bay models

showed that dolphins rested throughout daylight hours within bays with a peak

resting period between 10 am to 2 pm. The models also identified bottom-

substrate-type as an important predictor of rest. Pseudo R2 values of 0.61 and 0.70

for the in-bay models and 0.66 for the coastal model showed that these models

provided a good fit to the behavioural data for the occurrence of resting spinner

dolphins. To date, studies evaluating spinner dolphin resting habitat have focussed

on areas inside bays only. Here, I combined data collected inside and outside bays,

and illustrate that should resting spinner dolphins be displaced from resting bays,

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they are unlikely to engage in rest behaviour elsewhere. Results provide further

information on the importance of bays as important habitat for resting spinner

dolphins. To mitigate the disturbance from human interactions during important

rest periods, I recommend that management keep the spinner dolphin resting areas

free from human activities. My quantitative approach where models explicitly link

behaviour with habitat characteristics is applicable to identify important habitats

for protection of other taxa.

5.2 Introduction

Animals choose between behavioural activities across time and space (habitat) to

optimally exploit resources such as prey (Heithaus and Dill, 2002) and shelter (Lima,

1998) and to avoid predators (Heithaus et al., 2008). The costs and benefits

associated with choosing one behaviour over another shapes the evolution of

behavioural strategies which, in turn, influence individual fitness (Lima and Dill,

1990, Dill, 1987). Identifying relationships between behaviour and ecology is

challenging as they vary over space and time (Dill, 1987). Spatially, these

relationships exist over distances varying from a few metres to thousands of

kilometres and, temporally, over hours to months (Corkeron et al., 2001, Armstrong

et al., 2013).

Key habitats may function as critical for population viability by providing optimal

resources (e.g. shelter, prey)(Dill, 1987). In addition to coping with environmental

variations and resource availability within key habitats, many animals must also

cope with the consequences of human disturbance, including climate change

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(Johnston et al., 2012), de-forestation (Johnson et al., 2004), development (Holdo

et al., 2011), overfishing (Worm et al., 2013), fisheries by-catch (Allen et al., 2014)

and tourism (Bejder et al., 2006b, Lusseau et al., 2006, Constantine et al., 2004). To

quantity potential negative impacts of human disturbance on animal populations,

important areas for population viability can be identified by linking habitat

characteristics to either animal presence (Goetz et al., 2012) and/or important life

functional behaviours (Lusseau and Higham, 2004). Critical habitats can be defined

as areas where animals exhibit important behaviours such as foraging, breeding,

nursing, socialising and resting (Hoyt, 2011, Lusseau and Higham, 2004).

Spinner dolphins (Stenella longirostris) in Hawaii exploit sheltered bays to socialise

and rest during the day, following a night of cooperative foraging in open-water

foraging grounds (Norris et al., 1994, Benoit-Bird and Au, 2009). This temporal

partitioning of behaviours allows spinner dolphins to maximize their foraging

efficiency while minimizing predation risk during periods of rest (Norris et al., 1994,

Benoit-Bird and Au, 2009). This predictable behavioural pattern makes spinner

dolphins vulnerable to perturbation during rest periods, especially if they are

unable to compensate for disrupted resting periods (Johnston, 2014). The Hawaii

Island associated spinner dolphin population may be especially vulnerable to

human disturbance because their resting habitats are subject to considerable

human activity (Heenehan et al., 2015), the population is small (Tyne et al., 2014a)

and genetically-isolated from other populations (Andrews et al., 2010).

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Specifically, sheltered bays used by spinner dolphins to rest are also used by people

for recreational and commercial purposes (Heenehan et al., 2015). Spinner dolphin

resting periods are interrupted or truncated by exposure to human activity (Courbis

and Timmel, 2009), and they are less likely to rest when swimmers are within 150 m

(J. Symons et al. University of Aberdeen unpublished data).

The US National Oceanic and Atmospheric Administration (NOAA) is mandated to

protect all cetaceans, seals and sea lions in US waters, including the protection of

“essential habitat, including rookeries, mating grounds, and areas of similar

significance for each species of marine mammal from the adverse effect of man’s

actions.” (MMPA, 1972). Evidence suggests that protected areas can be effective

for marine mammal conservation if of appropriate size (Gormley et al., 2012, Edgar

et al., 2014). NOAA is considering several management strategies to mitigate the

negative effects of human-spinner dolphin interactions (NOAA, 2005), including the

use of area closures to reduce the number and intensity of interactions during

dolphin resting periods. This strategy proposes to identify specific areas that are

important to the population’s survival and restricting human access (Tyne et al.,

2014b).

I combined boat-based and land-based group focal follow data to determine the

resting behaviour of spinner dolphins across a range of available habitats, inside

four bays and along open coastline adjacent to the bays. My specific objectives

were to 1) identify key habitat factors that contribute to the likelihood of spinner

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dolphin rest, and 2) determine time periods that the spinner dolphins are most

likely to rest within these habitats.

5.3 Materials and Methods

This study took place in the waters off the Kona Coast (between 19 55° 37’N, 155

53° 45’W and 19 21° 40’N, 155 53° 31’W) on the leeward side of Hawaii Island

(Figure 5.1). Here, spinner dolphins are often observed within four bays during

daylight hours (Makako Bay, Kealakekua Bay, Honaunau Bay and Kauhako Bay,

Figure 5.1) (Norris et al., 1994, Thorne et al., 2012, Chapter 3; Tyne et al., 2014a).

Land-based and boat-based group focal follows were undertaken to collect

behavioural data on dolphin groups both inside and outside (within 1km of the

coastline) these four sheltered bays.

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Figure 5.1 The location of the spinner dolphin study area on the Kona Coast showing the four sheltered bays: Kauhako Bay, Honaunau Bay, Kealakekua Bay and Makako Bay, Hawaii Island and the behavioural observations of spinner dolphin groups (black circles) recorded during boat-based (n=28) and land-based (n=47) group focal follows. Each black circle (n=2,856) corresponds to the location where each ten minute scan sample was obtained.

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5.3.1 Group focal follows

Established group focal follow protocols were employed to collect positional and

behavioural information on spinner dolphins during daylight hours from both boat-

based and land-based platforms (Table 5-1). Group focal follows often consist of a

combination of continuous and scan sampling procedures (Altmann, 1974, Mann,

1999). Continuous sampling was used to obtain all occurrences of specific dolphin

behavioural events. Instantaneous scan sampling was used to record predominant

group behavioural activity at regular intervals, e.g. resting and socialising (Altmann,

1974, Mann, 1999, Bejder et al., 2006a).

Table 5-1 Definitions of spinner dolphin group activities, adapted from Norris et al (1994).

Predominant group activity:

Rest: Characterised by tight group, slow speed moving back forth generally over sandy substrate or meandering movement. Individuals typically take multiple breaths; synchronous group diving; changing direction whilst underwater; spend long periods of time submerged (1.5-3 minutes).

Social: Characterised by regular, consistent, aerial behaviours within the group; little time is spent below the surface; dives are brief.

Travel: Characterised by regular and consistent spatial progress with respect to the bottom (in practice surface and shoreline features), i.e. directed swimming that is roughly straight. Travel speed is typically >3.2km/hr.

Forage: Spinner dolphins do not forage during the day, but only at night offshore (Norris et al., 1994, Beniot-Bird and Au, 2003), thus this behavioural state was not observed.

A spinner dolphin group was defined using a 100-m chain rule: when A is within 100

m of B and B is within 100 m of C but A and C are more than 100 m apart, A and C

are considered to be in the same group (modified from Smolker et al., 1992).

Continuous sampling was employed to record all occurrences of fission-fusion

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events by individuals of the focal group. A fission event was defined as when an

individual, or part of the group, moved beyond the 100 m chain and a fusion event

was defined as when they joined the focal group by moving within the 100 m chain.

Instantaneous scan sampling protocols were employed at 5 (boat-based) and 10

min (land-based) intervals to record the predominant group activity of the majority

(> 50%) of individuals in the focal group, group size (minimum, best and max group

size estimates) and dolphin group location. A minimum of four people continuously

tracked spinner dolphins during a group focal follow. An observation period was

terminated when the behaviour of the dolphins could no longer be reliably

determined because of events, such as poor visibility, dolphins moved out of range

or dolphins split into too many groups.

5.3.2 Land-based group focal follows

Land-based group focal follows were undertaken from high vantage points

overlooking Kealakekua Bay (139 m, 19° 28' 59.7", 155° 55' 51") and Kauhako Bay

(57 m, 19° 22' 44.5", 155° 53' 47.5"). A SOKKIA DT5-10 digital theodolite equipped

with a 30 x lens was connected to a laptop computer running the computer

program PYTHAGORAS (Gailey and Ortega-Ortiz, 2002). PYTHAGORAS used data on

the theodolite’s position, height above sea level (including tidal fluctuations) and a

reference point used for zeroing, to convert theodolite positional fixes of target

objects (dolphin groups, boats, swimmers, kayaks) into latitudinal and longitudinal

coordinates (Würsig et al., 1991). At the start of tracking (usually between 06:30 am

and 07:00 am) and at hourly intervals, a scan was carried out to fix the position of

all vessels, swimmers and kayakers in the bay. A positional fix was taken at the

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centre of the focal dolphin group every 5 min and the predominant group

behaviour was recorded every 10 min. Theodolite observations were not carried

out at Honaunau and Makako bays because the elevation was too low to reliably

track dolphins from land.

5.3.3 Boat-based group focal follows

A 7m research vessel equipped with a 90 hp four stroke outboard, left dock at

sunrise, with a minimum of four researchers on board to look for spinner dolphin

groups moving inshore from their night time foraging grounds. The vessel travelled

within 1 km of the coast until spinner dolphins were located. Continuous and

instantaneous scan sampling were then initiated to document group behavioural

information. The predominant group activity was recorded every 5 min. Using

Logger software (IFAW, 2000), GPS coordinates of the focal group were recorded at

30 s intervals. Fission-fusion events were recorded continuously during the

sampling period. To minimise the impact of the presence of the research vessel on

the spinner dolphins during group focal follows, the vessel was maintained at a

distance of approximately 100 m from the focal group and the vessel was

positioned behind and to the side of the group. All care was taken to minimise

disturbance and changes in the dolphin group behaviour induced by the presence

of the vessel.

5.3.4 Bathymetric and benthic data

Bathymetric and benthic habitat data were produced using high-resolution

satellite, LiDAR (light detection and ranging) and acoustic SONAR (sound navigation

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and ranging). These data were downloaded from the Centre for Coastal Monitoring

and Assessment website (http://coastalscience.noaa.gov/) with a resolution of 50 x

50 m2. Focal follow data were converted from latitude and longitude projection to

the Universal Transverse Mercator (UTM) coordinate system and overlayed upon

the bathymetric and habitat maps using ArcGIS 10.1. Maps were overlayed on a

grid divided into 50 m2 cells. Thereafter, the corresponding depth, distance from

shore, habitat type, position, time of day for each 10 min dolphin group behavioural

sample in each cell, was extracted and exported to an Microsoft Access database.

The land-based focal follow protocol collected data every 5 min, however, alternate

data points were removed so that these data matched the boat-based protocol. For

some behavioural observations, habitat type and depth could not be determined

from the remotely sensed bathymetric and benthic habitat data. These data were

removed from the modelling process.

5.3.5 Modelling approach

I employed a method for addressing the complexities of non-linear and auto-

correlated ecological data commonly referred to as component-wise gradient

boosting (Friedman et al., 2000). Component-wise gradient boosting is a machine

learning method for obtaining statistical model estimates via gradient descent

techniques (Friedman et al., 2000, Hastie et al., 2009). Binomial component-wise

gradient-descent Boosted GAMs, hereafter referred to as Boosted GAMs, were

used to explore the relationship between resting spinner dolphins and a number of

environmental, spatial and temporal factors inside and out of the four sheltered

bays along the Kona coast of Hawaii Island. Boosting allows an integrated method

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for fitting constrained models with multiple sources of variation, including smooth

spatial interdependence by using spatial splines, as well as other non-linear

functions of environmental covariates. I fitted a spatial spline in order to fit variance

that is purely spatial and not related to the other covariates which is considered by

Hothorn et al. (2010b) as a way to partially address spatial autocorrelation. Spinner

dolphin behaviours were collapsed into a binominal response for behaviour states:

i.e., resting and non-resting (1 and 0, respectively). The R software (R Core Team,

2014), the boosting package ‘mboost’ (Hothorn et al., 2010a) and ‘rodbc’ (Ripley,

2013) package for database access were used to develop the Boosted GAMs.

5.3.6 Base-learners

Each predictor was added to the models via effect functions known as base-

learners (for details see Hofner, 2011). Bootstrapping and cross-validation was used

to determine the optimal number of boosting iterations to provide maximum

prediction accuracy and, in combination with automatic predictor selection, to

prevent over-fitting (Hofner et al., 2014). Stability selection was used to determine

the probability of predictor selection during the model fitting process (Meinshausen

and Bühlmann, 2010).

Three models were developed to investigate the relationship between resting

spinner dolphin groups and environmental, spatial and temporal factors. Two

models used data collected inside Kauhako Bay and Kealakekua Bay (‘in-bay

models’), respectively, while the third model (‘coastal model’) used data collected

both inside and outside of four sheltered bays: Kauhako Bay, Honaunau Bay,

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Kealakekua Bay and Makako Bay. Models developed for data collected inside

Honaunau Bay and Makako Bay were unable to converge due to insufficient data

from inside the bays and they were therefore not included in further analysis. The

two in-bay models were implemented using six base-learners, while the coastal

model included a seventh base-learner and an interaction (Table 5-2). A maximum

number of 1,000 iterations was applied to each bootstrap. The optimal number of

iterations was then determined and the base-learners that contributed to the

model fit in order of importance were identified from their selection frequencies

and probabilities of selection. Marginal function plots were used to illustrate the

relationship between the response and the predictor variables after accounting for

all other covariates (Maloney et al., 2012).

Table 5-2 List of base-learners used in the three Boosted Generalised Additive Models (GAMs) to explore relationships between resting spinner dolphins (resting or non-resting) and environmental, spatial and temporal factors. Single bay models = Kealakekua Bay and Kauhako Bay; coastal model includes all bays and coastal waters.

Model Base learners

All models (single bay and coastal model)

Substrate (sand, aggregate coral, rock/boulders) Depth (m) – mean centred Distance from shore (m) – mean centred Spatial position (converted to UTM) Time-of-day (morning: 6am-10am; mid-morning: 10am-2pm; afternoon: 2pm-6pm) Behavioural state during previous scan observation (resting/not-resting)

coastal model Inside or outside bays

For each model, 50 bootstrap samples from the full data set were used as a training

data set to which gradient boosting was applied, from which the pseudo R2

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(Nagelkerke, 1991) was estimated. Pseudo R2 estimates are a generalisation of the

R2 coefficient of determination, used to determine the proportion of variance in the

dependent variable shown by the independent predictor variables in linear

regression models (Nagelkerke, 1991). The higher the pseudo R2 value the better

the model fit. The prediction accuracy of each GAM was tested using bootstrap

cross validation (Hofner, 2011). Predicted responses were back-transformed to

their original measurement scales and used to produce predicted probability maps

of resting spinner dolphin groups in Kauhako Bay and Kealakekua Bay.

5.4 Results

5.4.1 Effort and sample sizes

A total of 488 hours of group behavioural data were collected during boat-based

(n=121 h) and land-based (n=367 h) focal follows, with 402 h of observations

(82.4%) made inside bays and 86 h outside of bays (Table 5-3). This resulted in

2,856 observations of spinner dolphin behaviour (2,395 inside bays and 461 outside

bays; Figure 5.1). The proportion of different substrate types available to spinner

dolphins in the study area varied inside and outside bays. However, the highest

proportion was rock/boulder, followed by sand and then aggregate reef both inside

and outside bays (Table 5-4). Spinner dolphins predominately rested inside bays

(Figure 5.2) while predominantly travelled outside bays (Figure 5.3). Although the

highest proportion of substrate available to spinner dolphins inside and outside

bays was rock/boulder, spinner dolphins occurred disproportionately more over

sand than any other substrate, 54% inside bays and 38% outside bays.

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Table 5-3 Number of focal follows, focal follow hours and mean focal follow duration from land-based and boat-based group focal follows of spinner dolphins inside bays and outside of bays along the Kona Coast, Hawaii Island.

Focal follow Number of focal follows

Focal follow hours

Mean focal follow duration (hh:mm)

Land-based Kealakekua Bay 40 329 8:31 ± 0:19 SE Kauhako Bay 7 38 3:25 ± 1:17 SE Total 47 367 7:40 ± 0:22 SE Boat-based Honaunau Bay 4 21 5:15 ± 1:24 SE Makako Bay 4 14 3:26 ± 0:27 SE Outside Bays 20 86 4:18 ± 0:33 SE Total 28 121 4:20 ± 0:27 SE

Overall total 75 488 6:30 ± 0:20 SE

Table 5-4 Proportion of substrate types available to spinner dolphins inside and outside of bays within the study area.

Substrate Inside bays Outside bays

Aggregate reef 0.20 0.15 Rock/boulder 0.46 0.63 Sand 0.34 0.22

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Figure 5.2 The proportion of time spinner dolphins were observed resting, socialising and traveling over available known substrate (aggregate reef, rock/boulder and sand) inside of sheltered bays along the Kona Coast, Hawaii Island. Error bars indicate 95% confidence intervals.

0.06 0.07

0.54

0.02 0.03

0.29

0.00 0.00 0.00 0.00

0.10

0.20

0.30

0.40

0.50

0.60

Aggregate Reef Rock/Boulder Sand

Pro

po

rtio

n o

f ti

me

Substrate type

Inside bays Rest

Social

Travel

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Figure 5.3 The proportion of time spinner dolphins were observed resting, socialising and traveling over available known substrate (aggregate reef, rock/boulder and sand) outside of sheltered bays along the Kona Coast, Hawaii Island. Error bars indicate 95% confidence intervals.

5.4.2 Boosted GAMs

The Boosted GAM modelling technique was used to take into account

autocorrelation in the focal follow data. Since depth and substrate data could not

be determined from the remote sensed bathymetric and habitat maps for some of

the dolphin group observations, 406 and 102 data points were removed from inside

and outside bays, respectively. This resulted in 2,348 behavioural, depth and

substrate data observations being included in the modelling procedure.

The prediction accuracy determined by the mean pseudo R2 values for the models

to predict the resting state of spinner dolphins was greater than 0.6 for all models

(0.701, 0.655 to 0.734 and 0.613, 0.608 to 0.617 for the two in-bay models; 0.663,

0.02 0.00

0.09

0.04 0.04 0.06

0.20 0.18

0.38

0.00

0.10

0.20

0.30

0.40

0.50

0.60

Aggregate Reef Rock/Boulder Sand

Pro

po

rtio

n o

f ti

me

Substrate type

Outside bays (Coastal) Rest

Social

Travel

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0.660 to 0.664 for the coastal model). These models provided a good fit to the

behavioural data as pseudo R2 values of between 0.55 and 0.60 have been

described as moderate/good (Maloney et al., 2012). Locations, behaviour during

previous scan observation and time of day were the most important variables for

predicting resting behaviour of spinner dolphins in both the in-bay models (Table

5-5). For the coastal model, the inside/outside variable was the most influential

variable in the model, with the time of day, behaviour during previous observation

and the inside/outside bay x substrate interaction having a similar level of influence

to each other (Table 5-5). No other predictor interactions were influential in

predicting spinner dolphin group resting behaviour in the three models.

The coastal model indicated that spinner dolphin groups are unlikely to rest when

outside sheltered bays (Figure 5.4). When inside the bays, substrate was influential

in predicting resting behaviour (Table 5-5). Depth and distance from shore were

never selected as main predictors for any of the three models. Time-of-day was

fitted to all three models, which predicted that spinner dolphins had a higher

probability of resting in the mid-morning than in the morning or afternoon (Figure

5.5). In addition, spinner dolphin groups in Kauhako Bay and Kealakekua Bay

predominantly rested over a sandy substrate (Figure 5.6).

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Table 5-5 The variables selected during the boosted Generalised Additive Modelling process to examine the influence of spatial position, previous behaviour, time-of-day, substrate and inside or outside of bays on the resting state of spinner dolphins. Optimal m is the point at which the model is stopped during the model fitting process to avoid over-fitting. Stability selection shows the probability of variable selection at optimal m. Maximum iterations = 1,000 bootstrap iterations with a 50-fold cross validation.

Model Optimal m Variables and selection frequencies

Stability selection probability at optimal

m

a) In-bay 1 234 Spatial position 0.67 1 (n = 200) Previous behaviour 0.25 0.98

Time-of-day 0.06 0.91

b) In-bay 2 223 Spatial position 0.52 1 (n =1,596) Previous behaviour 0.31 1

Time-of-day 0.17 1

c) coastal 431 Inside/outside bays 0.30 1 (n =2,348)

Inside/outside bays + substrate 0.26 1

Time-of-day 0.16 1 Previous behaviour 0.15 1 Spatial position 0.12 0.94

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Figure 5.4 Marginal function estimate showing the probability of spinner dolphins resting inside and outside of the four sheltered bays (Kauhako Bay, Honaunau Bay, Kealakekua Bay and Makako Bay). Error bars indicate 95% confidence intervals.

0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

0.9

1

Inside Bays Outside Bays

Pre

dic

ted

pro

bab

ility

of

rest

ing

Location

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Figure 5.5 Time of day (TOD) base learner marginal function estimates showing the predicted probability of spinner dolphins resting (± 95% confidence intervals) during the morning (6am-10am), mid-morning (10am-2pm) and afternoon (2pm-6pm) for Kauhako Bay and Kealakekua Bay. Resting behaviour based on land-based observations.

0.0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

0.9

1.0

Kauhako Bay Kealakekua Bay

Pre

dic

ted

pro

bab

ility

of

rest

ing

Location

Morning Mid-Morning Afternoon

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A

B

Figure 5.6 Predicted percentages for resting spinner dolphins modelled from Boosted GAMs in (A) Kealakekua Bay (n=1,526); and (A) Kauhako Bay (n=200). Grid cells are 50 m2 based on the resolution of available bathymetric and habitat maps.

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5.5 Discussion

The gradient boosted GAM analytical approach (Bühlmann and Hothorn, 2007) was

used to identify factors that influence the resting behaviour of spinner dolphins.

This approach overcomes the complexities of non-linearity and autocorrelation that

can be found in ecological data. Boosting automatically selects variables and

reduces effect estimates towards zero, which in combination, avoids over-fitting

(Hothorn et al., 2010b). Model fitting is constrained by stopping the model fitting

process at the optimal number of boosting iterations. This approach was used in

preference to maximum likelihood estimates that can over fit models when there

are many predictors and complex spatial and temporal processes. Spatial

autocorrelation was addressed by fitting a spatial spline in order to fit variance that

is purely spatial and not related to the other covariates (Hothorn et al., 2010b). The

results confirm that four sheltered bays (Kauhako Bay, Honaunau Bay, Kealakekua

Bay and Makako Bay) along the Kona Coast are important resting habitat for

spinner dolphins during daylight hours. Although dolphins spent significant

proportions of time resting in bays throughout daylight hours, most rest occurred

between 10am and 2pm. This study expands on previous research that highlighted

the importance of sheltered bays to spinner dolphins (Norris et al., 1994, Thorne et

al., 2012), by illustrating that dolphins are unlikely to rest outside of the key

habitats that support this important life function. These results provide

management agencies with valuable information to assist in implementing an

effective protected area management approach, to reduce the exposure of

dolphins to human disturbance during resting periods.

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Previous studies have shown that spinner dolphins rest over substrate types of low

complexity within these bays, i.e. areas of sandy bottom, and usually in less than

60 m of water (Thorne et al., 2012, Norris et al., 1994). To date, however, studies

evaluating spinner dolphin resting habitat have focussed on areas inside bays only.

The results from this study show that some habitat variables (e.g. depth and

distance from shore) were not important predictors of spinner dolphin rest. In fact,

the most important factor contributing to the likelihood of rest was whether

dolphins were within a bay or not. The interaction between substrate type and in-

bay presence, suggests that substrate (sand) is partially influential in predicting

resting behaviour. In coastal areas outside of bays, spinner dolphins spent

disproportionately more time over sandy substrates than over other substrates

available. However, in contrast to their behaviour in bays, dolphins seldom rested

over these sandy substrates. Instead, they were observed mainly travelling over

sand outside bays. This may be because the sandy substrate outside bays fails to

provide spinner dolphins with as safe a place to rest than when inside bays (Norris

et al., 1994) .

Cetacean-based tourism has increased dramatically in Hawaii over recent years

(O'Connor et al., 2009) which has led to increased human exposure to spinner

dolphins (Delfour, 2007, Courbis and Timmel, 2009). The cumulative exposure of

dolphin populations to human interactions has had detrimental effects on

bottlenose dolphins in Doubtful Sound, New Zealand (Lusseau, 2005) and on

bottlenose dolphins, Tursiops aduncus, in Shark Bay, Western Australia (Bejder et

al., 2006b, Higham and Bejder, 2008). In New Zealand, resting has been identified

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as the most sensitive behavioural state to disturbance of one population of

bottlenose dolphins (Lusseau, 2004). Spinner dolphin resting behaviour is often

interrupted or truncated by human activities and they leave resting bays in direct

response to human disturbance (Courbis and Timmel, 2009). Rest is a vital

component in the energy budgets of most animals (Cirelli and Tononi, 2008); as

animals tire, they become less vigilant and more vulnerable to predators (Dukas

and Clark, 1995). During night time foraging bouts spinner dolphins herd their prey

to increase its density and then cooperatively feed on these high density

aggregations (Benoit-Bird and Au, 2009). To recover from the energetically-

demanding foraging activity and increase their vigilance, spinner dolphins return to

these sheltered bays to rest (Johnston, 2014).

The results of the present study provide critical, but until now, missing evidence,

i.e. that outside sheltered bays, spinner dolphins are unlikely to rest. If dolphins

leave resting bays to avoid disturbance from human activities, our results indicate

that they are unlikely to rest and recover from the ongoing energetic and cognitive

costs associated with their rigid daily schedules.

5.5.1 Management of marine mammals

The MMPA was originally designed to minimise the capture (or ‘take’), harassment

and disturbance of marine mammals, primarily from by-catch from fisheries and

cetacean hunting. The MMPA defines the term ‘take’ as “… hunting, killing, capture

and harassment of a marine mammal or the attempt thereof”. Harassment is

defined as “… any act of pursuit, torment, or annoyance which (i) has the potential

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to injure a marine mammal or marine mammal stock in the wild; or (ii) has the

potential to disturb a marine mammal or marine mammal stock in the wild by

causing disruption of behavioral patterns, including, but not limited to, migration,

breathing, nursing, breeding, feeding, or sheltering.” Most human-dolphin

interactions (boat-based or swim-with) cause behavioural disruptions in dolphins,

which by the above definition is ‘harassment’. The burden of proof in documenting

dolphin behavioural changes as a consequence of human activities rests with the

management agency. However, interpreting dolphin behavioural changes as a

consequence of human activities is challenging and often clouded by arguments

that any observed behavioural changes are a consequence of natural phenomena

and not induced by human activity (Johnston, 2014). This highlights a need for an

enforcement policy to make legislation more easily understood, less ambiguous and

more fairly enforced. In 2005, NOAA published an Advance Notice of Proposed

Rulemaking to alert the public about the concerns surrounding human-dolphin

interactions, and to solicit feedback on potential options for future regulations

under the MMPA (NOAA, 2005).

5.5.2 Management implications

The Hawaii Island associated spinner dolphin population may be especially

vulnerable to disturbance because it is small (Chapter 3; Tyne et al., 2014a),

genetically distinct (Andrews et al., 2010) and is unlikely to rest outside sheltered

bays. On a daily basis humans seek out close-up interactions with spinner dolphins

both inside and outside of important resting areas (Wiener et al., 2009, Courbis and

Timmel, 2009). Cumulative exposure to human interactions within resting habitats

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may have a detrimental impact on spinner dolphins. Energetic models of spinner

dolphins in Hawaiian waters indicate that they are less likely to rest when

swimmers were within 150 m (J. Symons et al. University of Aberdeen unpublished

data). Although the current level of swim-with exposure in this region does not

appear to contribute to energetic deficits in spinner dolphins, research indicates

that any further increase in intensity is likely to drive these dolphins into an

energetic debt (J. Symons et al. University of Aberdeen unpublished data).

My results support management actions to reduce human access to preferred

dolphin resting areas during important resting periods. Using environmental, spatial

and temporal estimates of key habitats and guidance from energetic models (J.

Symons et al. University of Aberdeen unpublished data), I highlight two

management approaches that should be considered. The following options to

mitigate possible detrimental effects of human activity on spinner dolphins are

based purely from a biological and conservation perspective. Other factors (e.g.

cultural values and fishing activities) (Heenehan et al., 2015) also need to be taken

into consideration. Management options include, but are not limited to:

1. Restricting all human activity throughout bays during dolphin rest periods.

2. Restricting human access to specific habitats (sandy bottom) within resting bays

during important dolphin rest periods in combination with implementing a

buffer zone, e.g., 150 m - 300 m, around these particular habitats.

Distances over water are difficult to estimated (Kinzey and Gerrodette, 2003).

Therefore I recommend that any management action implementing restrictions to

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geographical regions should include surface markers to delineate the restricted

areas (e.g. U.S. Fish and Wildlife Service, 2001).

These management options take into account the need for an easily enforceable

policy by providing unambiguous solutions that can effectively protect the spinner

dolphins from harassment within important resting areas. Importantly, when

exploring measures to protect spinner dolphin resting habitat, decision makers

should note conclusions of a recent review of marine protected areas which

highlighted that the effectiveness of protected areas are dependent on protecting

an area of adequate size and on compliance and enforcement (Edgar 2014).

Interactions between human activities and marine vertebrates are often negative,

and the approach developed in this paper, where models explicitly link behaviour

with habitat characteristics to identify important habitats for protection, is much

needed. This approach is applicable to ongoing conservation conflicts, but could

also be a component of recovery plans for depleted species. Such models could

anticipate and avoid future conflicts as animals recover from exploitation and

reoccupy portions of their ranges. For example, female and young calf humpback

whales (Megaptera novaeangliae) use Exmouth Gulf, Western Australia, as a

resting area (Braithwaite et al., 2012). Exmouth Gulf has been earmarked for

possible future resource exploration and aquaculture development, and there is a

pressing need to identify crucial resting habitats and transit corridors before

development begins. This approach would also be useful for recovering species of

pinnipeds, such as gray seals in the U.S. East Coast (Wood et al., 2011), where

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combined assessments of breeding behaviour and colony habitat characteristics

could anticipate where new breeding colonies may form and how these colonies

may interact with coastal communities and other components of the marine

ecosystem.

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6 Cumulative exposure of Hawaiian spinner dolphins (Stenella longirostris) to human interactions: No rest for the weary

6.1 Abstract

Repeated exposure of wildlife to disturbance may affect individual vital rates and

ultimately population viability. Here, I quantify the cumulative exposure of human

activity on a small, genetically-isolated spinner dolphin stock off Hawaii Island that

is exposed to close-up human activity on a daily basis. I modelled the daytime

cumulative activity budget (resting, socialising and travelling) of dolphins under

impact (human activities within 100 m) and control (no human activities within 100

m) conditions. First, a systematic photo-identification study of individual dolphins (n

= 235) was used to record their presence/absence in each of four important dolphin

resting bays, based on the proportion of time they were observed in each bay.

Secondly, concurrent passive acoustic recordings (n = 1,546,560 30-sec recordings)

were used to document the daily presence/absence of dolphins within bays.

Thirdly, data from land-based and boat-based group focal follows (n = 428 hrs)

inside and outside resting bays were used to provide behavioural time series of

dolphins under control and impact conditions. Simulations were used to estimate

location specific (inside bays/outside bays) activity budgets for individual dolphins.

Finally, the cumulative activity budget of the population was estimated. During the

day, individual spinner dolphins spent between 49.5% and 69.4% of their time

resting (mean=61.7%, SD=6.5) and were exposed to human activities for 82.7% of

the time. Despite the high level of exposure, human activities seemingly did not

have a significant effect on dolphin activity budgets. This result is, however, likely

an artifact of the low level of control data available (< 18% of observations) to make

robust comparisons between behavioural patterns in control and impact conditions

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Furthermore, intervals between interactions were short (median duration =

10 min), before dolphins were exposed again, which may prevent individuals

recovering from disturbance and deprive them of rest. Control observations, as

defined in this study, may not accurately represent true resting behaviour of

spinner dolphins. Specifically, it is likely I quantified resting behaviour when

dolphins were in a “light” rather than a “deep” sleep behavioural state, which may

lead to rest deprivation, impaired cognitive abilities and ultimately effects on

population viability. The chronic exposure of spinner dolphins to human

interactions and the concurrent use of the resting bays for recreational, commercial

and subsistence purposes must now be of major concern for management.

6.2 Introduction

The effect of repeated exposure to human interactions on wildlife populations is a

concern for conservation management. Animals may respond to human

interactions as they would in the presence of a natural predator (Frid and Dill,

2002), by engaging in anti-predator behaviours (e.g. increased vigilance and/or

avoidance) at the costs of decreasing their time engaging in other important

activities such as foraging or resting (Lima and Dill, 1990, Lima, 1998, Heithaus and

Dill, 2002). Repeated interactions with humans lead to changes in many aspects of

dolphin behaviour and energetics, such as: activity budgets (Lusseau, 2003a),

energetic deficits (Williams et al., 2006, Christiansen et al., 2014), reduced vigilance

(Johnston, 2014), alteration of social interactions with conspecifics (Lusseau and

Newman, 2004), disruption of day-time behavioural patterns and inadequate rest

time (Lusseau, 2004) and displacement from prime habitat to less optimal habitat

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(Gill et al., 2001). These effects may have negative impacts on individual vital rates,

including survival and reproduction (National Research Council, 2005, Christiansen

and Lusseau, 2015), exceeding those caused by natural predation (Ciuti et al., 2012)

and ultimately having negative consequences for the viability of a population (Frid

and Dill, 2002).

Since the early 1980s, demand for human interactions with free-ranging cetaceans

has increased dramatically worldwide (O'Connor et al., 2009, Chapter 2; Tyne et al.,

2014b) Many coastal dolphin populations are now exposed to prolonged close-up

human encounters, which may disrupt the natural behavioural pattern between

interactions and prevent individuals from displaying their normal, undisturbed

behaviours (Bejder et al., 2006a, Lusseau, 2003a, Christiansen et al., 2010,

Constantine et al., 2004). In the short-term, dolphins may be able to compensate

for this temporary behavioural disruption (New et al., 2013) by, for example,

feeding at other times and/or locations (Heithaus and Dill, 2002). The frequency of

disturbance caused by human activities, however, may prevent recovery to a

natural behavioural pattern between interactions (Lusseau, 2004). Thus, the effect

of repeated short-term disruptions may lead to long-term avoidance strategies,

such as the avoidance of important and preferred habitats (National Research

Council, 2005, Lusseau, 2004, Bejder et al., 2006b). Habitat avoidance strategies

may be constrained, however, by the absence of suitable alternatives (Gill et al.,

2001, Bejder et al., 2009) and the condition of individuals, e.g., the animals being

too weak to relocate (Beale and Monaghan, 2004). As a consequence, individuals

may have no option but to remain and endure the disturbance, despite the

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potential cost of this to the population viability (Gill et al., 2001, Beale and

Monaghan, 2004, Bejder et al., 2009). Therefore, understanding how cumulative

behavioural disruptions affect the viability of populations is paramount to

preventing long-term negative impacts and ensuring the conservation of the

populations (National Research Council, 2005, Bejder et al., 2006b, Lusseau et al.,

2006, Currey et al., 2009). Furthermore, this information is valuable for developing

effective mitigation approaches that reduce the cumulative exposure of dolphins to

human interactions.

Hawaiian spinner dolphins (Stenella longirostris) exist in small (Chapter 3; Tyne et

al., 2014a), isolated stocks with restricted ranges (Andrews et al., 2010), and have

evolved a specialised diurnal behavioural pattern. They cooperatively forage

offshore at night and return to sheltered bays to rest and socialise during the day

(Norris and Dohl, 1980, Norris et al., 1994, Benoit-Bird and Au, 2009). This temporal

partitioning of behaviours allows spinner dolphins to maximize their foraging

efficiency, while avoiding predation during periods of recovery from their night

time foraging exertions (Johnston, 2014). As animals tire, they accrue what is often

referred to as a vigilance decrement (Dukas and Clark, 1995). In higher vertebrates

(reptiles, birds and mammals), vigilance decrements can manifest as a decreased

ability to detect camouflaged predators, which can lead to an increase in predation

risk (Heithaus and Dill, 2002). To recover from a vigilance decrement, animals must

rest (Cirelli and Tononi, 2008). The very structured, predictable behavioural pattern

of spinner dolphins renders them especially vulnerable to interrupted resting bouts

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during the day, as they have a limited ability to recover before embarking on

another foraging bout the following evening.

Hawaiian spinner dolphins are sought out and targeted on a daily basis by humans

eager to engage in close-up encounters (Norris, 1991). Throughout the day, spinner

dolphins are repeatedly approached by kayakers, swimmers and vessels for close-

up encounters (Courbis and Timmel, 2009) inside and outside their preferred

resting habitats within sheltered bays (Chapter 5; Tyne et al., 2015). The cumulative

effect of repeated interactions may have negative consequences for the spinner

dolphins, as they are less likely to rest when swimmers approach within 150 m

(Symons et al., University of Aberdeen unpublished data). Furthermore, as a

response to repeated interruption of resting bouts, it has been suggested that

dolphins are spending less time in the sheltered bays during the day (Courbis and

Timmel, 2009, Timmel et al., 2008, Delfour, 2007). If the dolphins are displaced

from their preferred resting habitat, they are unlikely to rest outside the bays

(Chapter 5; Tyne et al., 2015).

Concerns have been raised regarding the effects of human-dolphin interactions on

the Hawaii Island spinner dolphins (Danil et al., 2005, Courbis and Timmel, 2009).

The National Oceanic and Atmospheric Administration (NOAA) are looking to

implement a management strategy to reduce the number and intensity of human-

dolphin interactions in Hawaii (NOAA, 2005). One management strategy under

consideration is the implementation of time-area closures to restrict human access

(Chapter 2; Tyne et al., 2014b) in specific habitats that are important to the stock

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(Chapter 5; Tyne et al., 2015). Spatial management is considered an effective

approach to conserve marine mammal populations (Gormley et al., 2012), when

implemented at appropriate spatial and temporal scales (Edgar et al., 2014, Chapter

2; Tyne et al., 2014b).

To help understand the effect of human interactions on spinner dolphins and to

assist the development of an effective management strategy, data were collected

to determine the impact of cumulative exposure of dolphins to human activities,

both inside and outside preferred resting bays. These data came from a suite of

complementary sampling techniques, including boat-based photo-identification

surveys of individual dolphins, boat-based and land-based group focal follows and

passive acoustic recordings. The information from this study will be of great value

to management agencies in developing mitigation strategies for human-spinner

dolphin interactions.

6.3 Materials and methods

6.3.1 Fieldwork

In the waters off the Kona coast, on the leeward side of Hawaii Island (Figure 6.1),

spinner dolphins are often observed within four bays during the day: Makako Bay,

Kealakekua Bay, Honaunau Bay and Kauhako Bay (Figure 1; Norris et al., 1994,

Thorne et al., 2012, Chapter 3; Tyne et al., 2014a). Between September 2010 and

March 2013, boat-based surveys were undertaken both inside and outside (within 1

km of the coastline) of these bays (see Chapter 5; Tyne et al., 2015 for protocol) to

photographically-identify individual spinner dolphins and to record group behaviour

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(see Chapter 3; Tyne et al., 2014a for protocol). Land-based group behavioural focal

follows were undertaken via theodolite tracking from clifftops overlooking Kauhako

Bay (50 m elevation) and Kealakekua Bay (140 m elevation). Concurrently, acoustic

data of dolphin vocalisations (echolocation clicks, burst pulse sounds and whistles)

were recorded via bottom-mounted passive acoustic loggers in all four bays.

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Figure 6.1 Map of the study area illustrating the four spinner dolphin resting bays, Makako Bay, Kealakekua Bay, Honaunau Bay and Kauhako Bay, along the Kona Coast of Hawaii Island.

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6.3.2 Systematic photo-identification sampling

From September 2010 to August 2012, boat-based photographic-identification

surveys within the four preferred resting habitats of the Hawaii Island spinner

dolphin stock were carried out using a systematic sampling design developed by

Tyne et al. (2014a). Each bay was surveyed on the same dates each month,

regardless of whether dolphins were present or absent, providing consistent and

even effort throughout the study period and area: four days in Kauhako Bay; two

days in Honaunau Bay; four days in Kealakekua Bay; and two days in Makako Bay

(see Chapter 3; Tyne et al., 2014a for protocol). These data were used to investigate

whether individual dolphins showed a preference for a particular bay.

6.3.3 Group focal follows

Established group focal follow protocols were employed to collect positional and

behavioural information on spinner dolphins during daylight hours from both boat-

based and land-based (theodolite observations) platforms. Group focal follows

consisted of a combination of continuous and instantaneous scan sampling

procedures (Altmann, 1974, Mann, 1999). Instantaneous scan sampling recorded

the predominant group activity (see Table 1 for definitions of dolphin group

activities) at 10-min intervals (Altmann, 1974, Mann, 1999, Bejder et al., 2006a).

Behavioural data were categorised as control (undisturbed behaviour) or impact

situations. A control situation was when no kayaks, swimmers or boats were with

100 m of the focal group, while an impact situation was when a kayak, swimmer

and/or boat was within 100 m of the focal group. A group focal follow was

terminated when dolphin behaviour could no longer be reliably determined

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because of poor visibility, dolphins moving out of range or splitting into too many

groups. Further details of boat-based and land-based group focal follow protocols

are given in Chapter 5; Tyne et al. 2015.

Table 6-1 Definitions of spinner dolphin group activities, adapted from Norris et al (1994).

Predominant group activity:

Rest: Characterised by tight group, slow speed moving back forth generally Over sandy substrate or meandering movement. Individuals typically take multiple breaths; synchronous group diving; changing direction whilst underwater; spend long periods of time submerged (1.5-3 minutes).

Social: Characterised by regular, consistent, aerial behaviours within the group; little time is spent below the surface; dives are brief.

Travel: Characterised by regular and consistent spatial progress with respect to the bottom (in practice surface and shoreline features), i.e.directed swimming that is roughly straight. Travel speed is typically 3.2km/hr.

Forage: Spinner dolphins do not forage during the day, but only at night offshore (Norris et al., 1994, Beniot-Bird and Au, 2003), thus this behavioural state was not observed.

6.3.4 Passive acoustic recordings

From January 2011 through August 2012, 30-second, calibrated acoustic recordings

were made every four minutes at a sampling rate of 80 kHz within each of the four

resting bays via bottom-mounted DSG-Ocean acoustic instruments (Loggerhead

Instruments, Sarasota, FL, USA). Recorders were equipped with HTI-96-Min/3V

hydrophones (sensitivity: within 1 dB of -186.6 dbV μPa-1, High Tech Inc, Gulfport,

MS, USA), a 16-bit computer board and 30.9 GB SD cards. Acoustic data were

retrieved approximately every two weeks.

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6.4 Data analyses

6.4.1 Cumulative activity budgets

The cumulative activity budget of the dolphin population was estimated to evaluate

disturbance of human activities. The cumulative activity budget considered the

relative time that individual dolphins spent inside and outside of each of the four

bays, throughout the study period (Jan 8th 2011–Aug 30th 2012). Model simulations

estimated the cumulative activity budgets of the photographically-identified

dolphins. For each day, dolphins were randomly allocated to different bays based

on their relative occurrence in the bays, provided by the photo-identification data

(Figure 6.2A). When present in a bay, dolphins generally stayed there for the entire

day and rarely left the bay or relocated to another bay (Tyne, Murdoch University,

pers. obs.).

After allocating dolphins to bays, the passive acoustic data were used to confirm if

dolphins (binary response based on whether or not dolphin vocalisations had been

documented in recordings made within each bay) had indeed visited a particular

bay on a given day. If no acoustic data were available for a given day (equipment

malfunctions), dolphin presence was drawn at random for that day using a Bernoulli

process informed by the probability that dolphins would be present in that bay

(dolphin presence/number of observations). If a bay had not been visited by

dolphins on a given day, the dolphins allocated to that bay were removed and

allocated to outside the bays (Figure 6.2B). Based on where an individual dolphin

had been allocated, the time spent resting, socialising and travelling was estimated,

based on the area-specific activity budgets (Figure 6.2C).

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To account for uncertainty in the activity budget, a random proportion of the

activity budget was drawn from the density distributions that were obtained for the

area-specific activity budgets (see above) and allocated to a dolphin. This was

repeated for every day of the study period, assuming no within-day movements

between bays or movements from bays to outside of bays. The cumulative activity

budget was estimated by taking the sum of the duration of the different activity

states throughout the study period (Figure 6.2).

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Figure 6.2 Integration of three discreet datasets to model the cumulative activity budget of spinner dolphins inside and outside of resting bays along the Kona Coast of Hawaii Island. A) Individual spinner dolphin presence/absence in resting bays from systematic photo id sampling, B) Dolphin group presence/absence in resting bays from 24 hours per day of acoustic monitoring in resting bays and C) Dolphin group behavioural time series from group focal follows inside and outside of resting bays.

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6.4.2 Calculation of dolphin activity budgets for each bay

Activity budgets were defined as the proportion of time dolphins spent in each

activity state and estimated directly from behavioural data time series. Boat-based

data were used to estimate dolphin activity budgets for Makako Bay, Honaunau Bay

and outside bays. Boat-based and land-based data were combined to estimate

dolphin activity budgets within Kauhako Bay and Kealakekua Bay. For each bay,

activity states were drawn at random (with replacement) from the original data set,

with the total number of states equalling the original number of activity states for

each bay. A new activity budget was then estimated for that bay. This was repeated

1,000 times to obtain a density distribution of the relative proportion of each

activity state in the activity budget for each bay. From the resulting density

distributions, 95% highest posterior density (HPD) intervals, analogous to 95%

confidence intervals, were calculated. All calculations were performed using R 3.0

(R Core Team, 2014).

6.4.3 Factors affecting dolphin activity states

To better understand which factors influence spinner dolphin activity states, I used

the boat-based and land-based observational data to determine how the

probability of dolphin resting, socialising and travelling were affected by different

covariates, including: time-of-day (hour); day-of-year, dolphin group size; location

(inside or outside bays); number of boats/kayaks/swimmers present (within 100 m

of the dolphin group); and distance between dolphin group and

boats/kayaks/swimmers. Generalized Additive Mixed Models (GAMM; gamm in R

package mgcv) were used with a thin plate regression spline smoother and a

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binomial distribution and logit link function. In the model selection process,

covariates and interactions between covariates were added sequentially to the null

model. The F-statistic for the ANOVA F-test was estimated for each model and

compared with that of the previous model. Covariates were added both as linear

effects and non-linear smoothers to cover all possible relationships between the

response and explanatory variables. As sequential observations within focal follows

could not be considered independent, a temporal auto-correlation structure within

follows was incorporated in the model, where the residuals at any given time were

modelled as a function of the residuals of the previous time points. The most

suitable auto-correlation structure was fitted by altering the number of auto-

regressive and moving average parameters and then comparing the different

models. Auto-correlation and partial auto-correlation function plots were used to

detect patterns of auto-regressive and moving average parameters visually, before

and after adding the different correlation structures.

The variance inflation factor (VIF) was used to investigate collinearity (high

correlation) between the explanatory variables in the model. A threshold value of

three was used to remove collinear variables one at a time until all VIF values were

below three and no collinearity remained. For all models, model validation tests

were run to identify potential violations of assumptions. Scatter plots of residuals

versus fitted values and residuals against each explanatory variable were used to

test the assumption of equal variances (i.e. homogeneity of variance) in the model.

Normality of residuals was interpreted from Quantile-Quantile plots and from

residual histograms. Over-dispersion was tested for each model by dividing the

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residual deviance by the residual degrees of freedom and a value of > 1.5 was used

to indicate over-dispersion (Cox, 1983)).

6.4.4 Duration of interactions between dolphins and humans

The elapsed time between repeated disturbances can influence the activity budget

of dolphins (Lusseau, 2004), as exposed animals generally need time to return to

their initial activity state following an interaction (Meissner et al., 2015, Bejder et

al., 2006a). Insufficient time between interactions may prevent dolphins from

returning to their initial activity state. Consequently, the activity state between

interactions may not be a true representation of undisturbed dolphin activity state

(“control”). To investigate the elapsed time between human interactions with

dolphins (“impact”), frequency histograms of control and impact bout durations

(continuous time spent in impact or control situations) were inspected and

compared.

6.4.5 Passive acoustic recordings

Daily spectrograms were generated primarily in Raven Pro 1.5 (Cornell University)

but were also initially generated using XBAT (Cornell University), a bioacoustics

toolbox in Matlab. Spectrograms were generated using a 512-point DFT, 50%

overlap, and a 512 point (6.4 ms) Hann window. The presence of dolphin

vocalisations was investigated for each bay per day through manual visual

inspection, and was used to document the presence/absence of dolphins based on

whether or not vocalisations had been documented on recordings. Each daily

spectrogram was analyzed until dolphin vocalizations were documented. Once

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dolphin vocalizations were found on that day, the data were entered into a

spreadsheet, and this process continued for each day in the time series. Dolphin

vocalisations included whistles, burst pulse sounds and echolocation clicks. To avoid

mis-identification of background noise given the prevalence of snapping shrimp

sounds, files were marked with the presence of dolphin vocalisations only when the

following criterion were met: an echolocation click was found, the echolocation

bout was clear and sharp, spanned most of the recording and was found in

sequential recordings or it was followed by other dolphin vocalisations.

6.5 Results

6.5.1 Summary of photo-identification and behavioural sampling efforts

The systematic sampling design developed in Chapter 2 (see also Tyne et al. (2014a)

to collect individual spinner dolphin photo-identification data resulted in nearly

2,500 hours of on-water effort over 276 days of sampling (Table 6-2). Furthermore,

approximately 4,000 hours of matching and grading spinner dolphin dorsal fin

images were required to identify 235 highly distinctive individual spinner dolphins.

The sighting frequency of individual dolphins ranged from one to 48 during the

study period (Figure 3), with a mean (± 1 SE) of 12 ± 0.52.

Table 6-2 Number of days, hours and mean length of photo-identification surveys conducted within the four resting bays between September 2010 and August 2012

Location Survey days Hours Mean survey length

Makako Bay 46 395 8:35 ± 0:11 SE Kealakekua Bay 92 818 8:53 ± 0:13 SE Honaunau Bay 46 412 8:57 ± 0:15 SE Kauhako Bay 92 856 9:18 ± 0:10 SE

Total 276 2481 9:00 ± 0.12 SE

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Figure 6.3 Sighting frequencies of 235 photographically-identified spinner dolphins in Makako Bay, Kealakekua Bay, Honaunau Bay and Kauhako Bay between September 2010 and August 2012.

From a total of 105 boat- and land-based dolphin group focal follows that were

conducted over approximately 428 hours, 75 (71.4%) were from the boat-based

platform and 30 (28.6%) were from the land-based platform (Table 6-3).

Table 6-3 Number and duration of dolphin focal follows collected from land-based and boat-based platforms inside bays and outside of resting bays along the Kona Coast, Hawaii Island.

Focal follow

Number of focal

follows

Total focal

follow hours

Mean focal follow duration (hh:mm ± SE)

Land-based Kealakekua Bay 23 189 8:27 ± 0:19 Kauhako Bay 7 38 3:25 ± 1:17 Total 30 227 7:57 ± 0:22 Boat-based Makako Bay 13 26 2:00 ± 0:26 Kealakekua Bay 10 16 1:36 ± 0:15 Honaunau Bay 5 21 4:12 ± 0:15 Kauhako Bay 10 16 1:36 ± 0:48 Outside Bays 37

117 3:10 ± 0:13

Total 75 201 2:41 ± 0:10

Overall total 105 428 4:08 ± 0:51

0

10

20

30

40

50

60

1 71

31

92

53

13

74

34

95

56

16

77

37

98

59

19

71

03

10

91

15

12

11

27

13

31

39

14

51

51

15

71

63

16

91

75

18

11

87

19

31

99

20

52

11

21

72

23

22

92

35

Nu

mb

er o

f o

bse

rvat

ion

s

Individual dolphin

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6.5.2 Bay use by individual dolphins

Observations of individual spinner dolphins would be inflated in Kealakekua Bay

and Kauhako Bay due to the higher sampling effort in these bays (Table 1). To take

this into account the data were standardised by:

Randomly selecting two of the four sampling days in Kealakekua and

Kauhako Bay 100 times.

Identifying the frequency of individual dolphin observations in each bay on

both of the selected days.

Calculating the proportion of observations of each spinner dolphin in each

bay over the study period.

Averaging those proportions across the 100 samples.

Most dolphins (94%, n=220) were observed in Makako Bay, followed by Kealakekua

(55%, n=130), Honaunau (53%, n=124) and Kauhako (36%, n=85; Figure 6.4).

Figure 6.4 Proportion of the 235 identified spinner dolphins were documented in each of the four resting bays. Data from Kealakekua Bay and Kauhako Bay were standardised and error bars are shown.

0

10

20

30

40

50

60

70

80

90

100

Makako Bay Kealakekua Bay Honaunau Bay Kauhako Bay

Pro

po

rtio

n o

f in

div

idu

als

Resting Bays

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6.5.3 Passive acoustic monitoring efforts

In each of the four bays, bottom-mounted acoustic loggers were simultaneously

deployed during 601 days. A total of 1,546,560 30-sec recordings were made over

the study period (Table 6-4). Acoustic recordings confirmed the presence of

dolphins during 90% of monitoring days in Makako Bay, 65% in Kealakekua Bay,

37% in Honaunau Bay and 51% in Kauhako Bay (Table 6-4)

Table 6-4 Number of days spinner dolphins were present, absent, logger malfunctions and number of recordings in each resting bay from 601 days of passive acoustic recordings in each bay. The acoustic loggers recorded for 30 seconds every four minutes.

Bay

Days with acoustic data

No. of days that acoustic loggers malfunctioned

Total number of 30 s recordings

No. of days dolphins were present

No. of days dolphins were absent

Makako 565 36 406,800 506 59 Kealakekua 484 117 348,480 315 169 Honaunau 563 38 405,360 209 354 Kauhako 546 65 385,920 274 262

6.5.4 Dolphin activity budgets inside and outside resting bays

Spinner dolphins spent most of their time resting, followed by socialising and

travelling (Figure 6.5). The proportion of time spent resting was higher inside bays

(>60%) than outside (<40%; Figure 6.5). While time spent socialising was

approximately the same (35%) inside and outside bays, dolphins spent a

substantially higher proportion of time travelling outside (30%) than inside bays

(5%; Figure 6.5). There was little variation in the dolphins’ activity budget between

bays, with the exception of Makako Bay, where dolphins spent more time resting

(72.6%), and less time socialising (19.0%) than in the other bays (Figure 6.5).

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Figure 6.5 Proportion of time spent by spinner dolphins in different activity states inside and outside of four resting bays along the Kona Coast, Hawaii. Error bars represent 95% highest posterior density intervals, analogous to 95% confidence intervals.

6.5.5 Cumulative activity budget for the sampled population

Simulations showed that during daytime individual spinner dolphins spent most of

their time inside bays (76% of time), while spending 24% of time outside bays

(Figure 6.5). The cumulative activity budget showed that Individual dolphins spent

between 49.5% and 69.4% of their time resting (mean=61.7%, SD=6.5). There was a

peak in resting activity around 70% (Figure 6.6) as a consequence of dolphins

spending most of their time in Makako Bay, where resting was relatively higher

(Figure 6.5). Socialising activity showed a similar pattern, with dolphins spending

between 20.2 and 34.7% of their time socialising (mean=26.1%, SD=5.0), with a

peak around 20% (Figure 6.6), corresponding to the activity budget at Makako Bay

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(Figure 6.6). While both resting and socialising activities showed relatively large

individual variations, there was not much variation in the proportion of time

dolphins spent travelling, ranging between 10.3 and 16.9% of their time

(mean=12.2%, SD=1.6; Figure 6.6).

Figure 6.6 Density distribution of simulated dolphin cumulative activity budget, showing the relative proportion of each activity state (see legend), throughout the study period (Jan 8th 2011 – Aug 30th 2012) for the sample population.

6.5.6 Factors affecting dolphin activity

The most parsimonious GLMM explaining the daytime activity of spinner dolphins

included time-of-day as the only explanatory variable (Figure 6.7). There was a

curvilinear relationship between resting probability and time-of-day

(F5.6,2506.4 = 16.9, P < 0.001), with dolphins having a peak in resting in the middle of

the day (between 12:00 and 14:00) and a lower probability of resting during early

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morning and late afternoon (Figure 6.7A). An inverse curvilinear relationship was

found between socialising (F5.0,2507.0 = 11.7, P < 0.001) and travelling probabilities

(F4.5,2507.5 = 7.1, P < 0.001) and time-of-day. While the peak in the probability of

socialising occurred early in the morning (between 07:00 and 09:00) (Figure 6.7B),

the peak in the probability of travelling occurred a bit later in the morning (between

09:00 and 11:00) (Figure 6.7C). Both activity states showed a second peak late in

the afternoon (between 16:00 and 18:00) (Figure 6.7). All three models included an

auto-correlation within focal follows, with a lag of one (10 mins). The dispersion

parameters (φ) for the resting, socializing and travelling models were 0.96, 0.97 and

0.79, respectively, which indicated no over-dispersion of the Binomial GLMMs.

Time-of-day explained 25.7%, 18.7% and 2.7% of the deviance in the data, for

resting, socialising and travelling, respectively.

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Figure 6.7 The probability of spinner dolphins (A) resting, (B) socialising and (C) travelling as a function of time-of-day, estimated from the 428 hours of behavioural focal follow observations.

None of the human activity covariates (presence of boats/kayaks/swimmers,

distance between dolphins and boats/kayaks/swimmers) had a significant effect on

the probability of dolphins resting, socialising or travelling. All human activity

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covariates (presence of boat/kayak/swimmer) were collinear, and were also

collinear with time-of-day, preventing the use of more than one covariate in each

model. The control data (no boats/kayaks/swimmers present within 100m),

constituted only 27.7% of the land-based data, and 5.3% of the boat-based data. In

total, spinner dolphins were exposed to human activities (impact scenario; human

activity within 100m) during 82.7% of the time (focal follow observations).

6.5.7 Duration of interactions

The frequency histograms of control and impact bout durations (i.e. continuous

time spent in each situation) showed that control bouts were shorter compared to

impact bouts (Figure 6.8). The median bout durations during control situations

were 10 minutes for both the boat- and land-based data, while the corresponding

impact durations were 70 and 30 minutes, respectively.

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Figure 6.8 Frequency histograms of bout durations (continuous time spent in impact or control situations) of control (left column) and impact (right column) situations for dolphins, recorded from boat (top row) and land (bottom row).

6.6 Discussion

Data collected from a suite of sampling methods were analysed in combination to

derive an estimate of the cumulative exposure of the spinner dolphin stock to

human activities off the Kona Coast of Hawaii Island. During daytime hours,

dolphins were exposed to human activities for > 82% of the time. This level of

exposure appears to be much higher (> 25%) than those previously reported for any

other dolphin species and similar to those reported previously for spinner dolphins

(Table 6-5). Despite the high level of exposure, however, human activities

seemingly did not have a significant effect on the probability of spinner dolphins

resting, socialising or travelling. This result is, however, likely an artifact of the low

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level of control data available (< 18% of observations) to make robust comparisons

between behavioural patterns in control and impact conditions. Furthermore,

control bouts (no human activity within 100 m of dolphins) had a median duration

of only ten minutes before dolphins were exposed to human activity again. As

dolphins need time to recover from disturbance to return to a pre-disturbed activity

state (Lusseau, 2004, Bejder et al., 2006a), it is likely that the short time intervals

between interactions may be insufficient for the dolphins to recover from

disturbance (Moberg, 2000). For example, bottlenose dolphins in Milford Sound,

New Zealand, required at least 68 minutes between interactions to recover to their

pre-disturbed behaviour (Lusseau, 2004). Consequently, the control observations,

as defined in this current study, may not accurately represent natural resting

behaviour of spinner dolphins and may represent a behavioural state of “light

sleep” rather than in “deep sleep”. This could explain why no significant differences

were detected in the probabilities of observing specific activity states during impact

and control situations. Future research should obtain behavioural data in an

undisturbed environment on day time activities of Hawaiian spinner dolphins, e.g.,

from another Hawaiian Island (Molakai) location with lower population and fewer

people seeking to interact with dolphins than along the Kona Coast of Hawaii Island.

This would provide important information on undisturbed dolphin behavioural

patterns and activity budgets (resting, socialising, travelling) for comparing with

tourism-exposed dolphins, such as those off the Kona Coast.

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Table 6-5 Studies that have quantified exposure rates of dolphins to human activities and whether authors noted or inferred an impact. MV = Motorised Vessels, K = Kayaks, SUP = Stand-Up Paddleboard, S = Swimmers

Species

Proportion of time exposed to human activities %

Impact distance (m)

Source of disturbance

Behavioural response Study

Bottlenose dolphin (Tursiops truncatus) 9 400 MV, K Yes (Lusseau, 2003a) Bottlenose dolphin T. truncatus 10.8 400 MV, K Yes (Lusseau, 2004) Bottlenose dolphin T. truncatus 12.8 400 MV, K Yes (Lusseau, 2004) Bottlenose dolphin T. truncatus 15.5 400 MV, K Yes (Lusseau, 2006) Common dolphin Delphinus sp. 21 300 MV, SUP, K Yes

(Meissner et al., 2015)

Hectors dolphin Hectori hectori 23.6 200 MV No (Bejder et al., 1999) Bottlenose dolphin T. truncatus 24 50 MV, S Yes (Peters et al., 2012) Common dolphin Delphinus sp. 29 300 MV Yes (Stockin et al., 2008) Killer whale (Orcinus orca) 28.5 100 MV Yes (Lusseau et al., 2009) Dusky dolphin (Lagenorhynchus obscurus) 31 200 MV Yes (Dans et al., 2008) Killer whale (O. orca) 37.6 100 MV Yes (Lusseau et al., 2009) Bottlenose dolphin (T.truncatus) 45 50 MV, S Yes

(Stensland and Berggren, 2007)

Dusky dolphin (L. obscurus) 51.6 300 MV Yes

(Lundquist et al., 2012)

Bottlenose dolphin (T. truncatus) 58 300 MV Yes

(Constantine et al., 2004)

Spinner dolphin (S.longirostris) 77 300 MV, K, S

Not reported (Timmel et al., 2008)

Spinner dolphin (S.longirostris) 82.7 100 MV, K, S

Insufficient control data This study

During periods of activity, animals usually exhibit enhanced brain function, which is

often referred to as vigilance (Dukas and Clark, 1995). Vigilance is required for many

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activities including foraging, socialising and predator avoidance. As animals

undertake these cognitively challenging activities they tire, and accrue what is

referred to as a vigilance decrement (Dukas and Clark, 1995). In higher vertebrates,

vigilance decrements can manifest in a decreased ability to detect predators or prey

(Dukas and Clark, 1995). While no less serious, vigilance decrement can also

manifest in less obvious ways such as reduced cognitive capabilities (Dukas and

Clark, 1995). To recover from their cognitively challenging night time foraging

activities (Benoit-Bird and Au, 2009), spinner dolphins need to rest (Cirelli and

Tononi, 2008). Resting in dolphins has been highlighted as the most sensitive

activity to interactions with humans (Lusseau and Higham, 2004). Spinner dolphins

need to spend at least 60% of their day time activity budget resting to accrue a

positive activity budget for the day (Symons et al. University of Aberdeen

unpublished data). I have shown that individual spinner dolphins spent between

49.5 and 69.4% of their daytime resting (mean=61.7%, SD=6.5), suggesting that

some individuals may be deprived of the rest they need.

Rest deprivation can induce an increase in sleep pressure (Oleksenko et al., 1992),

which can lead to impaired cognitive and decision-making abilities (Cirelli and

Tononi, 2008), and in extreme cases death (Rechtschaffen et al., 1983). The

decision to rest by free-ranging animals is influenced by the risk of predation (Lima

and Dill, 1990, Lima et al., 2005). To reduce predation risk, spinner dolphins gather

in sheltered bays to rest during daytime (Norris and Dohl, 1980, Norris et al., 1994,

Chapter 5; Tyne et al., 2015). However, in these same bays spinner dolphins

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experience chronic exposure to human interactions, which may alter their state of

rest to one of a more vigilant nature, i.e. light sleep (Lima et al., 2005).

Depriving dolphins of deep rest may reduce the recovery time from their foraging

induced vigilance decrement (Dukas and Clark, 1995), and could result in impaired

cognitive abilities (Tartar et al., 2006, Rattenborg et al., 2004, Ganguly-Fitzgerald et

al., 2006) leading to increased vulnerability to predation and reduced foraging

efficiency. During their cooperative night time foraging bouts, pairs of spinner

dolphins take turns to forage within dense prey aggregations (Benoit-Bird and Au,

2009). Resting and socialising in sheltered bays may contribute to the success of the

collaborative foraging strategy employed by spinner dolphins (Benoit-Bird and Au,

2009), by developing and reinforcing social bonds between conspecifics. Impaired

cognition may affect social interactions which, in turn, can adversely affect the

social cohesion of a community (Lusseau and Newman, 2004). The success of the

cooperative foraging strategy employed by spinner dolphins (Benoit-Bird and Au,

2009) may be compromised as a consequence. Mothers and calves may be

particularly susceptible to sleep deprivation if the ability of mothers to properly

care for, feed and protect their calves is compromised (Siegel, 2008). Any reduction

in calf survival affects the population viability of the next generation.

Elsewhere, dolphin communities with considerably less cumulative exposure to

human activities (Table 6-5) have had their natural behavioural patterns disrupted

(Bejder et al., 2006a, Constantine et al., 2004, Christiansen et al., 2010) and energy

budgets affected (Williams et al., 2006). Repeated exposure to human activities has

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resulted in long-term habitat abandonment (Lusseau, 2004, Bejder et al., 2006a),

which has led to longer-term strategies such as the avoidance of important habitats

(Lusseau, 2004), and subsequently to biologically negative impacts on populations

(Lusseau et al., 2006, Bejder et al., 2006b, National Research Council, 2005). For

example, in Doubtful Sound, New Zealand, the short term avoidance of tour boats

by bottlenose dolphins led to a long-term avoidance of preferred habitat (Lusseau,

2004, Lusseau et al., 2006) and in Shark Bay, Western Australia, the relative

abundance of bottlenose dolphins within a tourism area declined in response to an

increase in tour vessel activity (Bejder et al., 2006b). Given the adverse effects on

the dolphin populations of Doubtful Sound, New Zealand and Shark Bay, Western

Australia, it is likely that the spinner dolphins of Hawaii may be under similar

pressure.

The resting bays are subject to considerable use by humans, some of which seek

out spinner dolphins for prolonged close-up encounters (Heenehan et al., 2015).

Concerns have been raised regarding the effect that repeated human-dolphin

interactions may have on spinner dolphins (Courbis and Timmel, 2009, Delfour,

2007). The cumulative exposure of spinner dolphins to human activities may affect

their vital rates (Christiansen and Lusseau, 2015, National Research Council, 2005),

alter their energetic budget (Williams et al., 2006) and ultimately affect population

viability (Bejder et al., 2006b, Lusseau et al., 2006). I demonstrate that dolphins

were chronically exposed to human activities during 83% of observations, a

magnitude significantly higher than reported for other dolphin species around the

world. Symons et al. (University of Aberdeen unpublished data) showed that

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spinner dolphins need to be in a resting state during at least 60% of their day-time

activity budget to maintain a positive activity budget. Results from my study found

that individual spinner dolphins spent between 49.5 and 69.4% of their time resting

(mean=61.7%, SD=6.5; Chapter 6). Therefore, some individuals may be in energetic

deficit and, perhaps more importantly, may be deprived of resting opportunities

with ramifications for their cognitive abilities (Cirelli and Tononi, 2008, Lima et al.,

2005). The results of this study didn’t show any significant negative effect on the

behavioural response of the spinner dolphins to human activities. This could be a

consequence of the lack of control data and the tolerance of the dolphins to the

chronic exposure to human activities. However, chronic exposure experienced by

the spinner dolphins and the negative behavioural responses from populations

elsewhere suggest a precautionary approach to the management of this spinner

dolphin population.

6.6.1 Management implications

The tourism industry is an important economic resource in Hawaii, and spinner

dolphin excursions are available year-round (Hu et al., 2009). From 2006–2007,

dolphin tour boats were operating close to 100% in the peak winter season

(December to February) and above 60% at other times during the year (Hu et al.,

2009). At present, there are no entry restrictions for new dolphin excursion

operators, which may lead to an unsustainable increase in dolphin excursion

numbers (Hu et al., 2009). It has been ten years since NOAA published an Advanced

Notice of Proposed Rulemaking raising concerns on spinner human-dolphin

interactions and seeking feedback on potential future regulations under the MMPA

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(NOAA, 2005). Within this time, scientific evidence has confirmed that Hawaii Island

spinner dolphins live in small (Chapter 3; Tyne et al., 2014a; Chapter 4) genetically-

isolated (Andrews et al., 2010) stocks, and rely on sheltered bays to rest and

socialise during the day (Norris et al., 1994, Chapter 5; Tyne et al., 2015). The

research in this Chapter has shown that they are exposed to chronic and repeated

human interactions and this may deprive them of rest, impair cognitive abilities,

increase predation risk, decrease foraging efficiency, accrue an energetic budget

deficit (Symons et al., University of Aberdeen unpublished data) and ultimately

effect population viability. The concurrent very high use of the resting bays for

recreational, subsistence and tourism purposes along the Kona Coast, (Heenehan et

al., 2015) must now be of major concern for management.

Management frameworks exist where legislation requires cetacean-watch

operators to obtain a license to engage in commercial activities. Such a framework

provides managers with the opportunity to regulate the level of exposure of a

cetacean population to tourism operations. In such cases, if the industry has a

detrimental effect, managers have the power to revoke licenses following an

adaptive management procedure (Higham et al., 2008). For example, an

unprecedented management decision was made to ensure the long term

sustainability of the dolphin-watch operations in Shark Bay, Western Australia. The

number of cetacean-watch operators was reduced from two to one within a

“tourism zone”. The removal of one commercial license operating within a specific

area was made after it was shown that the existing number of cetacean-watch

operators had reduced the relative abundance of bottlenose dolphins within the

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area of tourism (Bejder et al., 2006b, Higham and Bejder, 2008). In light of the

research findings presented here, and the detrimental impacts of dolphin-human

interactions documented elsewhere, it would be prudent to restrict the exposure of

spinner dolphins to human activities off the Kona coast. Unlike New Zealand and

Australia, cetacean-watching in Hawaii is not licensed and is managed under the

more general framework of Marine Mammal Protection Act (MMPA) (Roman et al.,

2013); restricting human-dolphin interactions by licensing is therefore not feasible.

What other options are available to protect cetacean populations against impact(s)

from human activities within the framework of the MMPA? (Chapter 2; Tyne et al.,

2014b). The current management intervention being considered for reducing the

exposure of spinner dolphins to human exposure is the implementation of time-

area closures in the four spinner dolphin resting bays (Chapter 5; Tyne et al., 2015,

NOAA, 2005). This management approach appears to be the most appropriate

given the available legislative framework and the context in which human-dolphin

interactions are occurring in the bays.

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7 Conclusions

Decision making for the conservation and management of wildlife populations is

critical and is most effective when based on rigorous scientific investigations and

rigorous monitoring regimes. In my thesis, I have provided an assessment of the

abundance, survival, habitat use and cumulative exposure of human activities on

the Hawaii Island spinner dolphin stock. This was achieved through four discrete

research components: a robust sampling regime in combination with capture-

recapture models to estimate abundance and survival rates; providing an

evaluation of the ability to detect changes (decline/increase) in population

abundance from various sampling scenarios; quantifying the important habitat for

resting spinner dolphins; and determining the cumulative exposure of spinner

dolphins to human activities. This research provides a strong scientific foundation

for informing management decisions for developing an approach to mitigate the

effects of human interactions on the Hawaii Island spinner dolphin stock.

The rigorous systematic sampling regime developed here, in combination with

capture-recapture models, was designed specifically to estimate the abundance and

the first survival rates for this stock of spinner dolphins (Chapter 3; Tyne et al.,

2014a; Chapter 4). The estimated abundance and survival rates for two consecutive

years were very similar (Chapter 3; Tyne et al., 2014a; Chapter 4). Both abundance

estimates were much lower (by about 35%) than any estimates previously reported

for this stock (Chapter 3; Tyne et al., 2014a). While direct comparisons between

previously reported abundance estimates and those presented here should be

made with caution, the much lower estimates for the number of dolphins off the

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Kona Coast (Chapter 4) documented here are a concern. The management plans for

this species should be reviewed in light of these estimates.

The ability to detect small changes (decline/increase) in abundance should be an

integral part of an effective population monitoring strategy (Thompson et al., 2000,

Wilson et al., 1999). Long-lived animals, however, are a management challenge, as

their slow growth rate and low fecundity can lead to slow recovery from

disturbance. These life-history characteristics require that monitoring is carried out

over tens of years to understand trends in abundance, particularly to detect small

rates of change that could be sufficient to reduce the population to seriously low

levels before a change is detected, and management intervenes. Here, an increase

in sampling effort increased the precision of abundance estimates and thus reduced

the time taken to detect a change in abundance (Chapter 4). However, even with

the most intensive sampling effort and with a 95% power of detection, the spinner

dolphin stock may be in a precipitous decline before a change is detected (Chapter

4). In light of the prolonged time period to detect change and the potential for a

large stock decline prior to detection, the precautionary principle suggests that a

lower power level (e.g., 80%) should be used as a potential indicator for

management intervention. This reduces the time for detection of a change from 12

to nine years and from seven to six years, with monitoring intervals of three years

and one year respectively, and depending on the size of the population, rate of

decline and precision of the estimates.

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Identifying habitat that is important to wildlife populations is a key consideration in

conservation management. To date, studies evaluating resting habitat of spinner

dolphins have focussed on areas inside bays only. My study integrated both boat-

based and land-based, group focal-follow sampling regimes inside and outside bays

and gradient boosting Generalised Additive Models (GAMs) to identify habitat

features that contribute to the occurrence of resting spinner dolphins in coastal

waters off Hawaii Island (Chapter 5; Tyne et al., 2015). The results show very clearly

that spinner dolphins are most likely to rest inside bays over a sandy substrate and

between 10 am and 2 pm. They also show that should spinner dolphins be

displaced from resting bays, they are unlikely to engage in rest behaviour

elsewhere, which further demonstrates the significance of the bays as critical

habitat.

These bays are also subject to considerable use by humans, some of which seek out

spinner dolphins for prolonged close-up encounters (Chapter 6; Heenehan et al.,

2015). Concerns have been raised regarding the effect that repeated human-

dolphin interactions may have on spinner dolphins (Courbis and Timmel, 2009,

Delfour, 2007). The cumulative exposure of spinner dolphins to human activities

may affect their vital rates (Christiansen and Lusseau, 2015, National Research

Council, 2005), alter their energetic budget (Williams et al., 2006) and ultimately

affect population viability (Bejder et al., 2006b, Lusseau et al., 2006). In Chapter 6, I

demonstrate that dolphins were chronically exposed to human activities during

83% of observations, a magnitude significantly higher than reported for other

dolphin species around the world (Chapter 6). Symons et al. (University of

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Aberdeen unpublished data) showed that spinner dolphins need to be in a resting

state during at least 60% of their day-time activity budget to maintain a positive

activity budget. Results from my study found that individual spinner dolphins spent

between 49.5 and 69.4% of their time resting (mean=61.7%, SD=6.5; Chapter 6).

Therefore, some individuals may be in energetic deficit and, perhaps more

importantly, may be deprived of resting opportunities with ramifications for their

cognitive abilities (Cirelli and Tononi, 2008, Lima et al., 2005).

Sleep deprivation has induced an increase in sleep pressure (the need to sleep) in

dolphins (Oleksenko et al., 1992), impaired cognitive and decision making abilities

(Ganguly-Fitzgerald et al., 2006, Rattenborg et al., 2004, Tartar et al., 2006), and in

extreme cases death (e.g. rats, Rechtschaffen et al., 1983). The decision by free-

ranging animals on where and when to rest is influenced by the risk of predation

(Lima and Dill, 1990, Lima et al., 2005). To reduce predation risk spinner dolphins

gather in sheltered bays to rest (Norris et al., 1994, Chapter 5; Tyne et al., 2015,

Norris and Dohl, 1980). However, in these same bays, dolphins experience chronic

exposure to human interactions (Chapter 6), which may alter their state of rest to

one of a more vigilant nature, i.e. lighter sleep (Lima et al., 2005). Depriving

dolphins of deep rest may reduce the recovery time from their foraging induced

vigilance decrement (Dukas and Clark, 1995), and could result in impaired cognitive

abilities (Rattenborg et al., 2004, Tartar et al., 2006, Cirelli and Tononi, 2008),

leading to an increased vulnerability to predation (Lima et al., 2005), reduced

foraging efficiency and ultimately reduced fecundity and population viability.

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Hawaii Island spinner dolphins live in small (Chapter 3; Tyne et al., 2014a; Chapter

4) genetically-isolated (Andrews et al., 2010) stocks, and rely on sheltered bays to

rest and socialise during the day (Norris et al., 1994, Chapter 5; Tyne et al., 2015).

They are chronically exposed to human activities that may deprive them of rest,

impair cognitive abilities, increase predation risk, decrease foraging efficiency, and

ultimately effect population viability (Chapter 6). Elsewhere, dolphin communities

with considerably less exposure to human activities (Chapter 6), have had their

natural behavioural patterns disrupted (Bejder et al., 2006a, Constantine et al.,

2004, Christiansen et al., 2010), and energy budgets effected (Williams et al., 2006)

which has led to longer-term strategies such as the avoidance of important habitats

(Lusseau, 2004), and subsequently to biologically negative impacts on populations

(Lusseau et al., 2006, Bejder et al., 2006b, National Research Council, 2005). The

considerable and concurrent use of the resting bays for recreational, subsistence

and tourism purposes, (Heenehan et al., 2015) must now be of major concern for

management.

7.1 Concluding remarks

In conclusion, my research documented that a) the genetically isolated Hawaii

Island spinner dolphin stock is small and less numerous than previously thought; b)

dolphins prefer sheltered bays for rest and are unlikely to rest outside bays; c)

dolphins are chronically exposed to humans inside resting bays; and d) the spinner

dolphin stock may be in a precipitous decline before a change is detected. The

results from my study provide NOAA and the NFMS in Hawaii with scientific

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information to evaluate various management options, and develop an effective

management strategy, to protect spinner dolphins from negative effects of human

activities.

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Appendix I: Peer-reviewed publications during candidature

1. de Freitas, M., Jensen, F.H., Tyne, J.A., Bejder, L., and Madsen, P.T. (2015)

Echolocation parameters of Australian humpback dolphins (Sousa sahulensis)

and Indo-Pacific bottlenose dolphins (Tursiops aduncas) in the wild. Journal of

the Acoustical Society of America.

2. Tyne, J.A., Johnston, D.W., Rankin, R., Loneragan, N.R. and Bejder, L. (2015). The

importance of spinner dolphin (Stenella longirostris) resting habitat:

Implications for management. Journal of Applied Ecology. doi: 10.1111/1365-

2664.12434

3. Heenehan, H., Basurto, X., Bejder, L., Tyne, J.A., Higham, J. and Johnston, D.W.

(2015). Using Ostrom’s common pool research theory to build and integrate

ecosystem-based sustainable cetacean tourism systems in Hawai`i. Journal of

Sustainable Tourism. 23(4): 536-556. doi: 10.1080/09669582.2014.986490

4. Tyne, J.A., Loneragan, N.R. and Bejder, L. (2014). The use of area-time closures

as a tool to manage cetacean-watch tourism. In Whale-watching, sustainable

tourism and ecological management (eds J. Higham, L.Bejder and R. Williams),

pp. 242-260. Cambridge University Press, Cambridge.

5. Anderson, D., Kobryn, H., Norman, B., Bejder L., Tyne, J.A. and Loneragan, N.R.

2014. Spatial and temporal patterns of nature-based tourism interactions with

whale sharks (Rhincodon typus) at Ningaloo Reef, Western Australia. Estuarine,

Coastal and Shelf Science 148: 109-119.

6. Tyne, J.A., Pollock, K.H., Johnston, D.W. and Bejder, L. (2014). Abundance and

Survival Rates of the Hawaii Island Associated Spinner Dolphin (Stenella

longirostris) Stock. PLoS ONE 9, e86132. doi:10.1371/journal.pone.0086132

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7. Allen SJ, Tyne JA, Kobryn HT, Bejder L, Pollock KH and Loneragan NR. (2014)

Patterns of Dolphin Bycatch in a North-Western Australian Trawl Fishery. PLoS

ONE 9(4): e93178. doi: 10.1371/journal.pone.0093178.

8. Thorne, L. H., Johnston, D.J., Urban, D.L., Tyne, J., Bejder, L., Baird, R.W., Yin, S.,

Rickards, S.H., Deakos, M., Mobley, J.R. Jr., Pack, A.A. and, Chapla-Hill, M. (2012)

Predictive modeling of spinner dolphin (Stenella longirostris) resting habitat in

the main Hawaiian Islands. PLoS ONE. 7(8): e43167.

doi:10.1371/journal.pone.0043167

9. Tyne JA, Loneragan NR, Kopps AM, Allen, SJ, Krützen M, Bejder L. (2012)

Ecological characteristics contribute to sponge distribution and tool use in

bottlenose dolphins Tursiops sp. Marine Ecology Progress Series 444:143-153.

10. Tyne, J.A., Loneragan, N., Krützen, M., Allen, S., and Bejder, L. (2010) An

integrated data management and video system to sample aquatic benthos.

Journal of Marine and Freshwater Research. 61: 1023-1028.

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Appendix II: Model selection tables

POPAN models fitted to the capture histories of Hawaiian spinner dolphins to estimate population parameters in Kauhako Bay along the Kona coast of Hawaii Island between September 2010 and August 2011 ĉ = 1.35.

Model QAICc ∆QAICc QAICc Weight

𝜑(. )𝑝(𝑡)𝑏(𝑡) 468.0579 0.0000 0.98968

𝜑(𝑡)𝑝(𝑡)𝑏(𝑡) 477.1855 9.1276 0.01031

𝜑(𝑡)𝑝(. )𝑏(𝑡) 493.6691 25.6112 0.00000

𝜑(. )𝑝(. )𝑏(𝑡) 561.0855 93.0276 0.00000

POPAN models fitted to the capture histories of Hawaiian spinner dolphins to estimate population parameters in Kauhako Bay along the Kona coast of Hawaii Island between September 2011 and August 2012 ĉ = 1.5.

Model QAICc ∆QAICc QAICc Weight

𝜑(. )𝑝(𝑡)𝑏(𝑡) 1682.9801 0.0000 0.60027

𝜑(𝑡)𝑝(𝑡)𝑏(𝑡) 1683.7933 0.8132 0.39973

𝜑(𝑡)𝑝(. )𝑏(𝑡) 1759.5230 76.5429 0.00000

𝜑(. )𝑝(. )𝑏(𝑡) 1812.0369 129.0568 0.00000

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