acknowledgments - springer978-1-4419-8234... · 2017-08-25 · acknowledgments any single-author...

39
Acknowledgments Any single-author book, especially a “how to” work such as this one, is the product of the writer’s life experiences, the influence of professional colleagues, and the writings of others whom I probably will never be meet in person. In addition to my professional time in private practice and later in academic medicine, my life experiences center around my family: Anita D. Taylor, MA Ed, an accomplished author and academician, honest critic, and sharp-eyed proof- reader; our children Diana and Sharon; and our four grand- children, Francesca (Frankie), Elizabeth (Masha), Jack, and Anna (Annie). I thank just some of the many physicians who, over the years, have helped me better understand medicine, writ- ing, and life. In no special order, these valued persons are: Doctors Robin Hull, Bob Bomengen, Ray Friedman, Tom Deutsch, John Saultz, Bill Toffler, Scott Fields, Eric Walsh, Peter Goodwin, Ben Jones, Joe Scherger, Takashi Yamada, Ryuki Kassai, John Kendall and Charles Visokay. Faculty colleagues Rick Deyo and Matthew Thompson helped me polish drafts of some parts of the book and, I earnestly hope, avoid egregious errors. Such faults as there are—and there surely are a few—are solely my doing. I offer a special thanks to Coelleda O’Neil, who has assisted with the manuscript preparation of my books for more than two decades. In addition, I gratefully acknowledge the excel- lent work of my Springer editor, Katharine Cacace. Finally, I am grateful to the clinicians and scientists who reported the case studies, systematic reviews, randomized trials and other publications that provided the examples used to support my advice about Medical Writing. R.B. Taylor, Medical Writing: A Guide for Clinicians, Educators, and Researchers, DOI 10.1007/978-1-4419-8234-6, © Springer Science+Business Media, LLC 2011 329

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Page 1: Acknowledgments - Springer978-1-4419-8234... · 2017-08-25 · Acknowledgments Any single-author book, especially a “how to” work such as this one, is the product of the writer’s

Acknowledgments

Any single-author book, especially a “how to” work such

as this one, is the product of the writer’s life experiences,

the influence of professional colleagues, and the writings of

others whom I probably will never be meet in person.

In addition to my professional time in private practice

and later in academic medicine, my life experiences center

around my family: Anita D. Taylor, MA Ed, an accomplished

author and academician, honest critic, and sharp-eyed proof-

reader; our children Diana and Sharon; and our four grand-

children, Francesca (Frankie), Elizabeth (Masha), Jack, and

Anna (Annie).

I thank just some of the many physicians who, over the

years, have helped me better understand medicine, writ-

ing, and life. In no special order, these valued persons are:

Doctors Robin Hull, Bob Bomengen, Ray Friedman, Tom

Deutsch, John Saultz, Bill Toffler, Scott Fields, Eric Walsh,

Peter Goodwin, Ben Jones, Joe Scherger, Takashi Yamada,

Ryuki Kassai, John Kendall and Charles Visokay. Faculty

colleagues Rick Deyo and Matthew Thompson helped me

polish drafts of some parts of the book and, I earnestly hope,

avoid egregious errors. Such faults as there are—and there

surely are a few—are solely my doing.

I offer a special thanks to Coelleda O’Neil, who has assisted

with the manuscript preparation of my books for more than

two decades. In addition, I gratefully acknowledge the excel-

lent work of my Springer editor, Katharine Cacace.

Finally, I am grateful to the clinicians and scientists who

reported the case studies, systematic reviews, randomized

trials and other publications that provided the examples used

to support my advice about Medical Writing.

R.B. Taylor, Medical Writing: A Guide for Clinicians, Educators, and Researchers, DOI 10.1007/978-1-4419-8234-6, © Springer Science+Business Media, LLC 2011

329

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Appendix 1. Glossary of Medical Writing Words and Phrases

Author  Someone who has actively participated in preparation 

of a paper or book, and who assumes  intellectual responsi-

bility  for  its  content.  An  archival author  is  an  author who 

assumes  responsibility  for  maintaining  research  and  other 

records related to a published article, just in case questions 

arise in the future.

Boolean logic  An approach  to relationships among search 

terms,  using  AND,  OR,  and  NOT.  Boolean  logic,  named 

for  British  philosopher  and  mathematician  George  Boole 

(1815–1864), was an important building block in the develop-

ment of today’s digital computer.

Camera-ready copy  Materials,  generally  figures,  that  do 

not  require  typesetting  and  are  suitable  for  photographic 

reproduction as submitted. Complicated chemical structures 

and mathematical  formulas are generally best  submitted as 

camera-ready copy.

Caption  See Legend.

Career topic  The  topic  that  you present  in writing  and  in 

lectures throughout your career, keeping up with all advances 

in the field. For clinicians, this is most likely to be a disease 

(such as hypertension), a clinical presentation (such as chest 

pain), or a procedure (such as retinal surgery or minimally 

invasive management of breast cancer).

Compositor  The person who sets the type for an article as 

it  is  being  prepared  for  printing.  A  synonym  is  typesetter, 

although technically type is no longer “set.”

331

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332 APPendix 1. GlossAry of MedicAl WritinG Words And PhrAses

Copyeditor  The person who makes needed improvements in 

grammar and syntax, and then marks up a manuscript for the 

printer. The copyeditor is generally employed by the publisher, 

and often is the author’s “best friend” during production.

Copyright  The legal right to publish, copy, sell, or otherwise 

use a specific intellectual property.

Cover letter  Also called a submission letter,  the cover  let-

ter is a document that should accompany every manuscript 

submission to a journal, even if the submission is a Letter to 

the Editor.

Direct costs  In  grant  parlance,  the  phrase  “direct  costs” 

refers to the price of salaries, equipment and supplies, as well 

as miscellaneous expenses such as consultant fees and travel 

related to the project. Also see indirect costs.

DOI  An abbreviation for Digital Object Identifier, an alpha-

numeric  label  used  to  distinguish  a  publication  online. For 

example,  the  identifier doi:10.1016/j.jamcollsurg.2010.09.013 

would  lead  the  reader  to  an  article  by Leichtle  et  al.  titled 

“Does preoperative anemia adversely affect colon and rectal 

surgery outcomes?” published in print in the February 2011 

issue of the Journal of the American College of Surgeons.

Duplicate or dual publication  The  unethical  practice  of 

publishing  the  same  data  two  or  more  times  in  different 

journals.

Editor  The  editor  holds  the  powerful  position  of  deciding 

which manuscripts  are  published  and which  “do  not meet 

our  publication  needs  at  this  time.”  There  are  also  various 

types  of  editor,  especially  in  book  publishing:  acquisition 

editors,  development  editors,  production  editors,  associate 

editors, and copyeditors.

Electronic journal  An online version of a medical publica-

tion. At this time, most electronic medical journals are exten-

sions of print publications. In the future, there are likely to be 

many freestanding electronic journals.

Funding preference  A  qualification  in  a  Request  for 

Proposal–generally  with  a  social  intent  such  as  improving 

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health care for the homeless or for pregnant women—that, if 

included in the grant proposal and approved, add points to 

the final grant review score, moving the application higher in 

the funding queue.

Galley proofs, galleys  A copy of typeset matter, lacking page 

numbers, intended to be reviewed by the author before being 

made into page proofs.

GIF  Representing  Graphic  Interchange  Format,  a  color 

image compression algorithm.

Grey literature  The  locus  of  many  trials  that  have  not 

achieved  primary  publication  in  scientific  journals.  Here 

we  find  posters  and  research  reports  presented  at  scien-

tific  congresses,  with  descriptions  found  in  conference 

abstract  collections.  The  common  thread  among  items  in 

the “grey literature” is  that they are outside the purview of 

conventional publishers. Thus,  such  items  include material 

produced in academics, government, business and industry 

disseminated in electronic formats or out-or-the-mainstream 

print sources.

Halftone  A  figure  composed  of  shades  of  gray,  usually  a 

“black and white” photograph or a shaded drawing.

Impact factor  The  total  number  of  citations  made  for  a 

journal in a year for articles published in two previous years 

divided by the number of citable articles published in these 

years. It is used to judge the influence, and by inference the 

quality, of a journal. See Chap. 5.

IMRAD  An  acronym  that  represents  the  organizational 

structure most often used in research reports: Introduction, 

Methods, Results, And Discussion. See Chap. 11.

Indirect costs  Grantspeak for expenses related to adminis-

tration of a project and for the price of electricity, heat, and 

building  maintenance.  At  the  NIH,  these  costs  are  termed 

facilities and administrative costs, actually a more informa-

tive description than indirect costs.

International Committee of Medical Journal Editors

(ICMJE)  The ICMJE is a group of medical journal editors, 

APPendix 1. GlossAry of MedicAl WritinG Words And PhrAses 333

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334 APPendix 1. GlossAry of MedicAl WritinG Words And PhrAses

representing a dozen diverse publications ranging  from the 

New England Journal of Medicine  to  the  Croatian Medical

Journal. Because their first meeting was held in Vancouver, 

Canada, the committee was originally called the “Vancouver 

Group.” Their chief product is the Uniform Requirements for

Manuscripts Submitted to Biomedical Journals,  described 

below.

JPEG  An acronym  for  Joint Photographic Experts Group, 

representing a method that balances compression and qual-

ity of images.

Legend  Also sometimes called a caption,  the  legend  is  the 

title of  a  figure or  table,  and may also provide  explanatory 

information.

Letter of intent  Also  sometimes called a proposal concept

paper, the letter of intent is a synopsis of a research idea sent 

to test the waters with a funding agency. In a sense, the letter 

of intent is a “pre-application query.” It asks the question: Do 

you think I should go to the trouble of preparing a full grant 

proposal for this idea?”

Line drawing, line art  A figure composed of black and white 

lines, such as a graph, diagram, or drawing that is not shaded.

Loansome Doc  A feature in PubMed that allows the user to 

place  an  electronic  order  through  the National Network of 

Libraries of Medicine for the full-text copy of an article found 

on MEDLINE.

Mark-up  This  refers  to  both  the  process  and  the  symbols 

by which  copyeditors  communicate  specific  instructions  to 

typesetters.

MDConsult  A  subscription-based  Web  site  that  allows 

one  to  search  medical  reference  books,  medical  journals, 

MEDLINE, and drug information. The site includes clinical 

practice guidelines and patient education handouts. It can be 

found at: www.mdconsult.com.

MEDLINE (Medical Literature, Analysis, and Retrieval

System Online)  The  U.S.  National  Library  of  Medicine’s 

(NLM)  leading  bibliographic  database.  It  contains millions 

334

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of references to journal articles in the life sciences, chiefly in 

biomedicine. It can be searched via PubMed or through the 

NLM gateway: www.nlm.nih.gov.

MeSH (Medical Subject Headings)  The  National  Library 

of  Medicine’s  controlled  vocabulary  thesaurus.  It  consists 

of sets of terms that permit searching MEDLINE at various 

levels of specificity.

Meta-analysis  A method of combining the results of several 

studies into a summary conclusion, using quantitative strate-

gies that will allow consideration of data in diverse research 

reports.

Monograph  A specialized book, usually relatively short and 

generally written by one person or a small group of specialists.

National Library of Medicine (NLM)  The  world’s  largest 

medical  library  with  collections  in  all  major  areas  of  the 

health sciences, and the home of MEDLINE and PubMed.

Network research  The  process  of  using  sequential  con-

tacts to find out a needed fact. The key question in network 

research is, “Who do you recommend that I call next?” For 

more details, see Chap. 3.

Offprints  See Reprints.

Open access  Publishing that is readily accessible online and 

free  to  all.  For  a  discussion  of  open  access  publishing,  see 

Chap. 12.

Overlay  A  transparent  sheet  with  graphic  material  to  be 

superimposed on another page.

Page proofs  A copy of typeset text laid out as it will appear 

in print, including headings and page numbers.

Pagination  The process of numbering the pages of a manu-

script. Your word processing program can do this for you.

PDF  An  abbreviation  for  Portable  Document  Format,  the 

file format used by Adobe Acrobat.

Peer review, peer reviewer  The  evaluation  of  a  submitted 

manuscript  by  individuals  with  appropriate  credentials, 

APPendix 1. GlossAry of MedicAl WritinG Words And PhrAses 335

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usually performed without the peer reviewers knowing who 

wrote the manuscript or the author knowing who performed 

the review. A peer reviewer may also be called a referee.

Positive outcome bias  Describing  how  a  research  study 

with a positive outcome—drug X was better than placebo—is 

more likely to be published than a study that show no differ-

ence between items tested.

Proof  A  copy of  a work  that  has  been  set  in  type,  sent  to 

authors  or  editors  to  review  for  errors.  Proof  may  be  gal-

ley proofs, when not yet set as pages, or may be actual page 

proofs of the article or book pages.

Proofreader’s marks  A set of symbols used to identify errors 

or changes on proofs. See Appendix 2.

Public Library of Science (PLoS)  A nonprofit organization 

of  scientists and physicians  that describes  itself  as commit-

ted to making the world’s scientific and medical literature a 

freely available public resource.

Publisher  The  person,  firm,  or  society  who  manages  the 

business  activities  related  to  bringing  books  or  journals  to 

print or to a Web site.

PubMed  A Web site that is a service of the National Library 

of Medicine, with more than 14 million citations for biomedi-

cal  articles  from MEDLINE  and  other  sources.  PubMed  is 

discussed  in  Chap.  1,  and  can  be  accessed  at:  http://www.

pubmed.com.

RBG  A color mode for images based on mixtures of red (R), 

green (G), and blue (B) light.

Redaction  The  process  of  word-by-word,  sentence-by-sen-

tence modification of a paper.

Referee  See Peer review, peer reviewer.

Reprints  Also  sometimes  called  offprints,  these  are  sepa-

rately printed copies of  individual  journal articles. Journals 

generally provide these to authors for a fee.

Request for proposal (RFP)  A  funding agency’s  invitation 

to submit grant proposals.

336 APPendix 1. GlossAry of MedicAl WritinG Words And PhrAses336

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Research report  Also called a “scientific paper,” the research 

report describes the results of a research study.

Review article  A paper that deals with known information 

in a  thoughtful way, but does not present new data such as 

the results of a clinical research study.

Running head  A  shorthand  listing  of  items—usually  an 

abbreviated title of the article or chapter that appears at the 

top of each page of a manuscript or book.  In  the case of a 

manuscript, the running head allows the editor to reassemble 

the pages if blown about by the wind. Because of the anonym-

ity of peer review, most journals do not want author names 

included in a manuscript’s running head.

Science Citation Index (SCI)  A  proprietary  database  of 

citations of published articles, the SCI is also used to calcu-

late the journal impact factor.

Stop  A unit of punctuation  that breaks  the  flow of words. 

Stops include the comma, colon, semicolon, question mark, 

and exclamation mark.

Stub  Heading and line captions appearing at the side of a 

formal table, used to describe the rows of figures  presented.

Target journal  As you prepare an article, the target journal 

is  number one on  your publication wish  list.  This  is where 

you would like your paper published, and the article’s format 

and style should mirror those of the target journal.

Tear sheets  Pages  removed  from  a  previously  published 

book,  generally  used when  revising—on  paper—a  previous 

edition of the book.

Trade books  Books published to be sold to the general pub-

lic,  not  to  the market  of  professional  clinicians  and  educa-

tors. Books  for  clinicians,  scientists  and  other  scholars  are 

called professional books.

Typesetting  The  process  of  composing  the  edited  manu-

script  as  it  will  appear  in  the  final  pages.  This  term  is 

 becoming obsolete.

APPendix 1. GlossAry of MedicAl WritinG Words And PhrAses 337

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Uniform Requirements for Manuscripts Submitted to

Biomedical Journals  A  statement by  the  ICMJE, available 

on the Web, describing how to prepare a paper for a medical 

journal. It also covers related ethical issues in research and 

writing. See further discussion in Chap. 1. Access the latest 

version at: www.icmje.org.

UpToDate  A subscription-based Web site that provided timely 

reviews on clinical topics: http://www.uptodate.com.

338 APPendix 1. GlossAry of MedicAl WritinG Words And PhrAses338

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The following symbols are used when correcting galley and 

page proofs.

MeaningDelete; take outClose upDelete and close upInsert spaceEqual space between wordsInsert word(s)Insert periodInsert commaInsert semicolonInsert hyphenInsert parenthesesInsert apostropheInsert as superscriptMake subscriptStraighten line(s)Make new paragraphNo paragraph – run inTransposeMove left as indicatedMove right as indicatedCapital

Small capitalsLower caseRoman typeItalicCapital italicBoldface typeSpell outLet stand as is

Appendix 2. Proofreader’s Marks

339

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* This list may be used in your medical writing. No specific permission form 

is required for use, but please give full credit to this book as the source.

Appendix 3. commonly Used Medical Abbreviations*

Abbreviation Meaning

ACE Angiotensin-converting enzyme

ACTH Adrenocorticotropic hormone

AIDS Acquired immunodeficiency syndrome

ALT Alanine aminotransferase (SGPT)

ANA Antinuclear antibody

AST Aspartate aminotransferase (SGOT)

bid Twice a day

BP Blood pressure

bpm Beats per minute

BS Blood sugar

BUN Blood urea nitrogen

CBC Complete blood count

CHD Coronary heart disease

CHF Congestive heart failure

Cl–

Chloride

CO2

Carbon dioxide

COPD Chronic obstructive pulmonary disease

CPR Cardiopulmonary resuscitation

CSF Cerebrospinal fluid

CT Computed tomography

cu mm Cubic millimeter

CXR Chest x-ray

d Day, daily

dL Deciliter

DM Diabetes mellitus

ECG Electrocardiogram

ESR Erythrocyte sedimentation rate

341

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FDA United States Food and Drug Administration

g Gram

GI Gastrointestinal

Hb Hemoglobin

HDL-C High-density lipoprotein cholesterol

HF Heart failure

Hg Mercury

HIV Human immunodeficiency virus

HMO Health maintenance organization

hr Hour

hs Hour of sleep, at bedtime

HTN Hypertension

IM Intramuscular

INR International normalized ratio

IU International unit

IV Intravenous

K+

Potassium

kg Kilogram

L Liter

LD or LDH Lactate dehydrogenase

LDL-C Low-density lipoprotein cholesterol

mEq Milliequivalent

mcg Microgram

mg Milligram

min Minute

mL Milliliter

mm Millimeter

mm3

Cubic millimeter

MRI Magnetic resonance imaging

Na+

Sodium

NSAID Nonsteroidal antiinflammatory drug

po By mouth (per os)

PT Prothrombin time

PTT Partial thromboplastin time

q Every

qd Every day; daily

qid Four times a day

qod Every other day

RBC Red blood cell, red blood count

SC Subcutaneous

342 APPendix 3. coMMonly Used MedicAl AbbreviAtions342

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sec Second

SGOT See AST

SGPT See ALT

STD Sexually transmitted disease

TB Tuberculosis

tid Three times a day

TSH Thyroid-stimulating hormone

U Unit

UA Urine analysis

WBC White blood cell, white blood count

343APPendix 3. coMMonly Used MedicAl AbbreviAtions

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clinical chemistry tests reference values

Alanine aminotransferase (ALT, SGPT) 0–35 U/L

Albumin 3.6–5.2 g/dL

Alkaline phosphatase (ALP) 35–120 U/L

Amylase, serum 44–128 U/L

Aspartate aminotransferase (AST, 

SGOT)

0–35 U/L

Bilirubin, conjugated 0–0.2 mg/dL

Bilirubin, total 0.2–1.2 mg/dL

Calcium 8.5–10.5 mg/dL

Carbon dioxide (CO2), total 23–30 mEq/L

Chloride 98–109 mEq/L

Creatine kinase (CK, CPK) 30–170 U/L

Creatinine 0.7–1.2 mg/dL

Gamma glutamyltransferase (GGT) 5–40 U/L

Glucose, fasting 65–110 mg/dL

Hemoglobin A1C

5.0–7.0% of total Hb

Iron, serum 50–170 mg/dL

Iron binding capacity, total (TIBC) 270–390 mg/dL

Lactate, serum (venous) 5.0–20.0 mg/dL

Lactate dehydrogenase (LDH) 110–260 U/L

Lipase 10–140 U/L

Magnesium 1.5–2.5 mg/dL

Potassium 3.5–5.1 mEq/L

Prostate-specific antigen (PSA) 0–4 ng/mL

Protein, total 6.1–7.9 g/dL

Sodium 136–147 mEq/L

Troponin I <2.5 ng/mL

Appendix 4. laboratory reference values for Adults*

* This list may be used in your medical writing. No specific permission form 

is required for use. Please give full credit to this book as the source.

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Troponin T <0.2 ng/mL

Urea nitrogen 6.0–23.0 mg/dL

Uric acid 2.6–7.2 mg/dL

lipid panel

Cholesterol, total 160–240 mg/dL

HDL cholesterol >40 mg/dL

LDL cholesterol <130 mg/dL

Triglycerides 55–200 mg/dL

thyroid function tests

Thyroid stimulating hormone (TSH) 2–11 mU/mL

Thyroxine, free (FT4) 0.8–2.4 ng/dL

Thyroxine, total (T4) 4.0–12.0 mcg/dL

Triiodothyronine (T3) 70–200 ng/dL

Triiodothyronine (T3) resin uptake (T

3 RU) 25–38%

Blood gasesArterial Venous

Base excess −3.0 to +3.0 

mEq/L

−5.0 to +5.0 

mEq/L

Bicarbonate (HCO3) 18–25 mEq/L 18–25 mEq/L

pO2

80–95 mmHg 30–48 mmHg

O2 saturation 95–98% 60–85%

pCO2

34–45 mmHg 35–52 mmHg

Total CO2

23–30 mEq/L 24–31 mEq/L

pH 7.35–7.45 7.32–7.42

hematology and coagulation tests

White cell (WBC) count 3.4–10.0 K/mm3

Hemoglobin (Hb, Hbg) 12.2–18.0 g/dL

Hematocrit (Hct) 37.0–54.0%

Red cell (RBC) count 3.80–5.20 mil-

lion/mm3

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APPendix 4. lAborAtory reference vAlUes for AdUlts

Mean corpuscular volume (MCV) 85.0–95.0 cu 

micra

Mean corpuscular hemoglobin (MCH) 26.0–34.0 pg/cell

MCH concentration (MCHC) 32.6–36.0 g/dL

Red cell distribution width (RDW) 11.5–15.0%

Platelet count 150.0–420.0 K/

mm3

Reticulocyte count 0.5–1.5% of 

RBCs

WBC differential

  Neutrophils 38–70%

  Lymphocytes 16–49%

  Monocytes 2–9%

  Eosinophils 0–5%

  Basophils 0–2%

Sedimentation rate

  Adult male 0–15 mm/h

  Adult female 0–20 mm/h

Coagulation tests

  Fibrinogen 200–400 mg/dL

  Partial thromboplastin time (PTT) 60–85 s

  Activated PTT 25–35 s

  Prothrombin time (PT) 11–14 s

Note: The reference intervals shown are for adults, and may 

vary according to technique or laboratory, or as new methods 

are introduced. Always consult the reference range for your 

own laboratory.

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The  following  is  a  list  of  terms  commonly  used  in  writing 

research protocols,  grant applications, and  reports of  clini-

cal studies.

Absolute risk  This  is  the  probability  of  something,  such  as 

myocardial infarction or death, occurring, without reference 

to any special context, such as comparison to another setting.

Absolute risk reduction (ARR)  Typically  referring  to 

adverse events, absolute risk describes the probability of an 

event  in  the population under  study,  and ARR  is  the  arith-

metic  difference  in  the  rates  of  events  between  study  and 

control  groups.  It  is  the  inverse  of  the  number needed to

treat (NNT). Relative risk reduction  (RRR)  is  the  percent-

age  difference  in  outcomes  between  the  study  and  control 

groups. Here is an example: If a treatment, such as use of an 

antiplatelet agent, decreases the risk of a stroke from 2 per 

thousand to 1 per thousand, than the absolute risk reduction 

is  1/1,000. And  in  this  scenario,  the  relative  risk  reduction 

(described below) is 50%.

Bias  Also called systematic error, bias describes something 

that  might  confound  the  validity  of  a  study.  One  example 

is exclusion bias, which occurs when persons with  specific 

characteristics,  such  as  a  co-existing  disease,  are  excluded 

from a  study  sample. Another  type of bias  is attrition bias, 

in which  there  is  a pattern  that  arises among persons who 

drop out of a study. There is also recall bias, referral bias and 

selection bias, described below.

Case-control study  A  retrospective comparison of a group 

of  subjects  with  a  disease  or  outcome  of  interest  with  a 

Appendix 5. Methodological and statistical terms Used in research studies

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group without the disease or outcome of interest, seeking a 

probable cause for the disease or outcome in the study (case) 

group  that  is  absent  in  the  control  group.  In  other words, 

this  study  design  starts with  the  disease  or  outcome—such 

a stroke--and looks back to identify antecedent events, expo-

sures, or risk factors.

Cochrane Collaboration  A  network  of  physicians  and 

scholars who perform systematic reviews and meta-analyses 

of  randomized  clinical  trials  and  other  research  stud-

ies. The  results of  their  efforts  are  found  in The Cochrane

Database of Systematic Reviews,  which  can  be  accessed 

at:  http://www.cochrane.org/.  The  name  commemorates 

the British physician and epidemiologist Archie Cochrane 

(1909–1988), who  advocated  for  systematic  summaries  of 

best  evidence  to  improve  the  effectiveness  and  efficiency 

of care.

Cohort  A defined group of people (subjects). A study group 

and a control group might each be called a cohort. A study 

cohort may or may not share one of many types of attributes: 

age, race, exposure to a disease, presence of a disease, use of 

a drug, or something else.

Cohort study  Sometimes  called  incidence  or  longitudinal 

studies, cohort studies are observation research that involves 

examination of a study group (who received an intervention 

or were exposed to a risk) versus a control group. In contrast 

to a case-control study, a cohort study starts with the expo-

sure and follows subjects  to determine the outcome. A long 

term follow-up of a group of persons accidentally exposed to 

radiation in an industrial accident versus a control group of 

unexposed persons would be a cohort study.

Confidence interval (CI)  An  estimate  of  reliability.  For 

example  an  author  describing  a  “95% CI”  is  saying  that  if 

things  are done  the  same way 100  times, we would  expect 

similar results in at least 95% of instances.

Crossover trial  A  method  of  comparing  interventions  in 

which subjects  in  two cohorts each complete one course of 

treatment and then are switched to the other.

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APPendix 5. MethodoloGicAl And stAtisticAl terMs

Cross-sectional study  Observation  research  involving 

 disease in relationship to other variables in a specific popula-

tion at a specific time. Most such research involves a one-shot 

survey of subjects.

Effectiveness  An expression of the extent to which an inter-

vention yields a desired outcome.

Hazard ratio (HR)  According  to  the  National  Cancer 

Institute,  the  hazard  ratio  describes  how  often  a  particu-

lar  event  happens  in  one  group  compared  to  how  often  it 

happens  in  another  group, measured  over  time.  In  cancer 

research,  hazard  ratios  are  often  used  in  clinical  trials  to 

measure survival at any point in time in a group of patients 

who have been given a specific treatment compared to a con-

trol group given another treatment or a placebo, generating 

the familiar “survival curves.” In this setting, a hazard ratio 

of 1 means that there is no difference in survival between the 

two groups. A hazard ratio of greater than one or less than 

one means that survival was better in one of the groups.

Incidence, incidence rate  A  measurement  of  the  number 

of  previously  unaffected  persons  who  develop  a  condition 

during a particular period of  time,  such as a  year, 5  years 

or even a lifetime. Knowing the incidence of a disease helps 

us understand  the  likelihood  that a disease will occur  in a 

given  person  over  a  given  time  frame.  For  example,  think 

of a cruise  ship carrying 1,000 passengers on a week  long 

voyage. If, during that voyage, 95 persons develop acute gas-

troenteritis, then the incidence of that disease in that popu-

lation of passengers for that 7-day time interval is 95/1,000 

or 9.5%.

Likelihood ratio (LR)  The  odds  that  a  given  test  result 

would  be  expected  in  a  patient  with  the  specific  disease 

compared  to  the  chances  that  that  same  result  would  be 

expected  in  a  patient without  the  disease  in  question.  The 

LR  is  helpful  in  assessing  the  probability  that  a  specific 

diagnostic test will be useful. It does so by providing a direct 

estimate of how much a test result will change the odds of 

finding a disease, and incorporates both the sensitivity and 

specificity of the test. The likelihood ratio for a positive test 

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result  is:  sensitivity/1  –  specificity.  The  likelihood  ratio  for 

a negative test result is: 1 – sensitivity/specificity. A LR less 

than  1  indicates  a  lower  likelihood  of  disease, while  a  LR 

greater than 1 indicates a higher likelihood of disease. Tests 

with LRs less than 0.2 or greater than 5.0 tend to be the most 

useful clinically.

Meta-analysis  A type of systematic review (see below) that 

involves quantitative methods and  rigorous pooling of  data 

from  applicable  clinical  trials.  Perhaps  the  best  known 

of  the  meta-analyses  are  the  reports  from  the  Cochrane 

Collaboration.

Mixed methods research  Research that combines quantita-

tive  and  qualitative methods  in  a  single  study.  It  has  been 

called the third research paradigm.

Null hypothesis (H0)  An assertion that no statistical signifi-

cance exists in a set of given observations. It is presumed to 

be true until statistical evidence nullifies it for an alternative 

hypothesis.

Number needed to treat (NNT)  The number of persons who 

must receive an intervention in order for one more person to 

benefit.  It  can be  calculated  as  the  inverse  of  absolute  risk 

reduction  (1/ARR). The other  side of  the coin would be  the 

number needed to harm (NNH).

Odds ratio  The odds ratio  is a descriptive statistic used to 

assess  the  risk  of  a particular  outcome,  typically  a disease, 

if a certain risk  factor or event  is present. Thus  it  is a rela-

tive measure  of  risk,  telling  us  how much more  likely  it  is 

that someone who is exposed to the factor being studied will 

develop the disease or other outcome as compared to some-

one who is not exposed.

Post-test probability  The proportion of patients with a par-

ticular  test result who have  the  target disorder.  In deciding 

whether or not to recommend a specific test--for example, a 

magnetic resonance scan in a patient with back pain—know-

ing the post-test probability will help  the clinician decide  if 

the test result is likely to make a difference in the treatment 

of the patient.

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APPendix 5. MethodoloGicAl And stAtisticAl terMs

Precision  An  expression,  often  described  as  a  confidence

interval (see above), of the paucity of random error.

Predictive value  A  ratio,  stated  as  a  percentage,  of  the 

patients with a positive tests for a disease who actually have 

the  disease  (positive predictive value).  Predictive  value  is 

strongly affected by  the prevalence of a disease, even  if  the 

sensitivity and specificity of the test remain constant. There 

is also negative predictive value, the probability that a person 

with a negative test does not have the disease in question.

Pre-test probability  A measurement  of  the  likelihood  of  a 

positive  test  result  determined  before  the  result  of  a  test  is 

known.  For  example,  if  we  know,  hypothetically,  that  in  a 

large  population  of  50  year  old  asymptomatic  women,  the 

vitamin D level will be low in 9% of subjects, this figure repre-

sents the pre-test probability of finding a low vitamin D serum 

level in the next asymptomatic 50-year-old woman tested.

Pre-test/post-test case series  An observational study in which 

outcomes  are measured  in  subjects  before  and  again  after 

exposure to some sort of intervention. Clinician researchers 

are fond of using this method to measure clinician behavior, 

such as prescribing, before and after being exposed  to new 

information.

Prevalence  A measurement of the total number of cases of 

the disease in the population at a given time. It may be stated 

as a percentage: the total number of cases in the population 

(the numerator) divided by the number of individuals in the 

population  (the  denominator).  Hypertension,  for  example 

is  often  stated  as  having  a  28–30%  prevalence  in  the  U.S. 

population. Prevalence tells us how common a disease is. In 

contrast,  incidence tells us how many new cases occur in a 

given time frame.

Primary outcome  The  finding  considered  most  clinically 

relevant in assessing the effect of an intervention. As an exam-

ple,  in a study of the use of a new analgesic in treating low 

back pain the primary outcome would logically be back pain 

relief, and not, for instance, reports of improvement in gen-

eral well-being or a reduced incidence of tension headaches.

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Prospective study  A  “looking-forward”  study  in which  the 

outcome event has not yet occurred. An example might be a 

study of what happens when a group of overweight persons 

are treated with a new appetite suppressant versus the out-

come  in a similar group of persons who do not receive  the 

drug.  Randomized  trials  are  all  prospective  studies,  as  are 

some cohort studies.

p-value  See Statistical significance, below.

Qualitative research  Research used when traditional quanti-

tative measurements would not be helpful. Usually employed 

in  studies  of  human  subjects,  qualitative  research  explores 

issues,  phenomena  and  the  reasons  underlying  decision-

making.

Randomization  A  process,  sometimes  called  random

allocation,  by  which  subjects  are  assigned  to  groups  by 

chance, often using a table of random numbers. At the other 

end of the spectrum is the convenience sample, which might 

be the next 100 patients to walk through the door.

Randomized controlled trial (RCT)  The  gold  standard  of 

clinical scientific research, the RCT is an experimental study 

design that involves random allocation of subjects and inter-

ventions.  With  successful  randomization  of  subjects,  study 

and control group have comparable characteristics  (even  if 

we  don’t  know  what  the  relevant  characteristics  are!)  and 

selection bias is absent.

Recall bias  A  systematic  error  in  a  research  study  that 

occurs when evidence is collected by relying on the patient’s 

memory. Think of  a  study  that  involves  administration of  a 

new vaccine evaluated by an interview a few weeks later, ask-

ing about possible side effects.

Referral bias  A  type  of  systematic  error  related  to who  is 

assigned to the study versus the control group, typically seen 

when patients  are  referred  from  the  community  to  a  study 

in  a  tertiary  care  center,  and  decisions  are made  based  on 

patient characteristics as to who should be in which cohort. 

The result is a non-randomized study.

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APPendix 5. MethodoloGicAl And stAtisticAl terMs

Relative risk (RR)  Also sometimes called the risk ratio. The 

probability of an adverse outcome occurring during a speci-

fied  time  interval  in a  study group exposed  to  some sort of 

event versus the outcome without the exposure. For example, 

we might be concerned with the relative risk of stroke among 

persons with and without hypertension.

Relative risk reduction (RRR)  An expression of the degree 

to which an intervention decreases the probability of devel-

oping a disease, complication, or other adverse outcome. For 

example, we might  conduct  a  study  to  see what  protection 

against major  cardiovascular  events  is  afforded  by  various 

categories of antihypertensive agents.

Reliability  The consistency of an assessment method. If the 

speedometer on my car happens to be set to read 50 miles per 

hour (mph) when the actual speed is 60 mph, it will reflect 

this error every time, and thus be reliable even though it  is 

not  accurate.  This will make  scant  difference  to  the  traffic 

officer who writes the summons for speeding.

Retrospective cohort study  An  examination  of  what  has 

already happened to a group of individuals who experienced 

an  exposure  or  intervention  compared  with  an  otherwise 

similar group who did not experience the exposure or inter-

vention.  An  example  of  such  a  study  might  be  the  record 

review to determine the uterine cancer risk that has already 

occurred in women exposed to hormone replacement therapy 

(HRT) compared to a similar group with no HRT exposure. A 

prospective cohort study,  in contrast, would  follow exposed 

and unexposed women into the future.

Selection bias  In a  cohort or  case  control  study,  selection 

bias  occurs when,  for  one  reason  or  another,  study  groups 

and  control  groups  differ  from  the  start.  Suppose,  for 

instance, that in a cohort study to determine the outcome of 

treating  heart  failure with  a  specific  drug,  the  intervention 

group had far more diabetic patients than the control group. 

Selection bias may also be termed allocation bias.

Sensitivity (Sn)  A  measurement  of  the  portion  of  items 

 correctly detected as present. This usually has to do with tests 

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used to detect disease. Thus a test with 100% (also stated as 

1.0) sensitivity  for  tuberculosis,  for example, would  identify 

all persons with the disease, and a test with a 0.5 sensitivity 

would detect half of those infected. Compare this term with 

Specificity, described below. A test with a high sensitivity will 

have few false negatives.

Specificity (Sp)  A measurement of the proportions of items 

correctly  identified as not present, often represented as  the 

percentage of healthy people who are correctly identified as 

not  having  a  particular  disease.  Thus  a  test with  100%  (or 

alternatively,  1.0)  specificity  for  tuberculosis,  for  example, 

would  not  identify  (incorrectly)  anyone  from  the  healthy 

group as sick. A test with a high specificity will have few false 

positives.

Statistical significance  The term refers the likelihood that a 

result could occur by chance, usually expressed as a p-value. 

The smaller the p-value the less  likely  it  is  that the findings 

reported  are  the  result  of  chance.  If  the  level  is  0.05,  then 

there  is a 5% chance  that  the  findings occurred by chance. 

In research  terminology, a setting  in which a so-called null 

hypothesis  (see  above)  is  often  employed,  the  smaller  the 

p-value, the less likely the null hypothesis is true, and conse-

quently the more statistically significant the reported result is 

considered. Thus a p-value of 0.01 represents a higher level of 

statistical significance than a p-value of 0.05.

Stratification  The  process  of  separating  research  subjects 

into clinically relevant subgroups for analysis. For example, 

we might  stratify  the  analysis  of  a  drug  for  treating hyper-

tension  by  separately  examining  patients with  and without 

elevated  creatinine  levels.  This  is  one  strategy  for  reducing 

confounding;  another  strategy  would  be  to  simply  exclude 

patients with high creatinine levels from a study.

Systematic review  A general term describing a look-back at 

multiple published reports on a single topic in an attempt to 

answer one or more focused questions relevant to the topic. 

Using  a  reproducible  search  strategy  in  bibliographic  data 

bases,  and  selecting  all  articles  that meet  specified  criteria 

(e.g.,  sample  size,  randomization,  or  other  design  features) 

356 APPendix 5. MethodoloGicAl And stAtisticAl terMs356

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are  the  characteristics  that make  a  review  “systematic,”  in 

contrast to “what’s in my file drawer.”

Validity  A description of the extent to which a study accu-

rately measures what the researcher set out to measure. There 

are  various  types  of  validity:  Face validity  is  the  research 

“sniff test:” Do the study design and results reported seem to 

make sense? Internal validity has to do with the integrity of 

the research design. External validity is a description of the 

extent  to  which  the  study  conclusions  are  generalizable  to 

other populations. These all differ from reliability– the repro-

ducibility of the actual measuring instrument or procedure.

APPendix 5. MethodoloGicAl And stAtisticAl terMs 357

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Index

A

Academic medical center (AMC)

corporate-sponsored research,

243–244

grant office, 243

Acceptance letter, 306

AMC. See Academic medical center

American Medical Writers

Association (AMWA), 319

AMWA. See American Medical

Writers Association

Article structure

components, 36

concept, 35

controversies, 37

IMRAD model, 37

information presentation, 35

list, 37

mistakes, 38

preliminary outline, 36

questions and answers, 37

report writing, 37

review format, 35

rules, 35

Article submission plan

aiming high, 289–290

editors, journal

author instructions, 290–291

peer review system, 290

rapid review, 291

good and bad manuscripts

chain letter and attention

grabber, 292

clone, 291–292

editor’s view, 291

shell game and ambush, 292

Zombie, 293

journal selection

article formats and impact

factor, 289

paper topics, 288–289

Authored books

advantage, 213

contracts, 212–213

vs.edited, 210

enrichment books, single-author,

211–212

proposal packet, 202, 212

B

Baby and Child Care, 213

“Benign brutality”, 86

BHP. See Bureau of health

professions

Bias

attrition, 346

exclusion, 346

recall, 346, 351

referral, 346, 351

selection, 346, 352

Blueprint, 31, 38, 57, 65

BMJ. See British Medical Journal

Book chapters

Difficult Diagnosis, 191–192

invitation, writing

academician and clinician, 192

agreement, 192–193

description, 191–192

negotiable and non negotiable

items, 194

359

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360 Index

Book chapters (Continued)

preparation and submission

checklist review, 197

Difficult Diagnosis, 195–196

structure, 196–197

review articles, 191

Book review

appropriate entries, 176

art of writing

beginning, 178–179

clarity and book’s ability, 178

factual accuracy, 178

follow pattern, 178

good and bad points,

179–180

questions, reviewer, 180

summarize reviewer’s opinion,

180–181

cautions, 182–183

contribution, 176

difficulties, 176

excellent review

arguments, 181–182

aware, 182

merits and attempt

to outshine, 181

witty and taste, 182

factual accuracy, 178

journals and editors, 175–176

mid-twentieth century, 175

today’s reviews, 175

types

classic/standard

comparison, 177

favorite topics, 177

good features balancing,

177–178

relationship, 176

British Medical Journal (BMJ)

British Medical Journal for the

American Physician

(BMJ-USA), 145

letters, editor, 169

OA publishing, 322–323

publication fee, 322

weekly circulation, 117

Bureau of Health Professions

(BHP), 241

C

Carvedilol Prospective Randomized

Cumulative Survival

(COPERNICUS) Study, 224

Case report

case-related analysis, 162

format, 163–165

letter-style, 163

literature and article review, 162

observations, single and several

patients, 163

patient, disease, 162

in practice, 162–163

recording, 161

Clarity

crystal-clear, 79–80

meaning, 79

misuse, Thesaurus, 82

MS Word Thesaurus, 80

neophyte, 80–81

plural words, 82

weighty words and sentences, 80

words and constructions, 80

“wrote of” and “referred to”, 81

Clinical study report

epidemiology, 265

IMRAD model

abstract, 272–273

acknowledgments, 282–283

authors, 270–272

discussion, 280–281

elements, 269

format, 266

introduction, 274–276

key words, 274

methods, 276–278

references, 281–282

results, 278–279

title, 269–270

trial registration, 274

JAMA, 266

The Lancet, 266

mistakes

checklist, 283–284

group wordsmithing and

midnight editing, 283

original research

preparation, 266

360

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Index 361

rigid format, 267

Pediatrics, 265

research

academic careers, 267

author opinions, 284–285

hypothesis-based, 268–269

mentors, 285

print, 285

quality writing and design, 284

questions, 267–268

Computer programs

drug reference, 18

electronic medical dictionary,

17–18

spell checker/MS program, 18

thesaurus, 17

Contests, 318–319

COPERNICUS. See Carvedilol

Prospective Randomized

Cumulative Survival Study

D

Danger signs

cuteness, 85

red-flag phrases, 84

statement, 85

Data collection and organization

data phase, 67

notes, 68–69

outlines

determine topic and concept, 69

expand heading levels, 70

sub-heading levels, 70–71

preparation, 72

references, 71–72

research tools, 68

Density

printed page, 43, 45

sentence, 46–47

Difficult Diagnosis, 191, 195–197,

199, 205, 208

Difficult Medical Management, 205

E

Echoic words, 58

Edited books

after publication, 209–210

compile

chapter, 206–207

missing chapters, 207–208

compiling editor, 197–198

contract

description, 202–203

items, review, 203

surprises, 204

working, authors, 204

find right person

acquisitions editor,

200–201

potential publishers, 201

initiator, 197

planning

decision, 199

publisher, financial risk,

198–199

steps, 199

time commitment, 199–200

proposal, 201–202

publication, 208–209

working, authors

agreement, 205–206

development editor, 206

recruitment, 204–205

reminders, 206

Editorial

editor, 165

editorial opinion, 165

types

accompanying comment, 167

editor’s opinion, 166

journals publisher, 166

salesmanship, 166

sharing special insight,

167–168

volunteered, 165

writing

counterevidence, 169

headings, 169

offer evidence and support

opinions, 168

personal insight, 169

present problem, 168

provide clue, 168

reference sources list, 169

summary, 169

Errata, 125, 210, 312, 314

361

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362 Index

Errors

errata, 312–314

galley proofs, 209

grant proposal writing, 261–262

review article, 158–159

systematic, 346, 351

Ethical issues

author qualification, 137–138

conflict-of-interest problem,

133–134

duplicate publication, 138–139

ghost authorship, 137

honorary authors, 136–137

ICMJE, 135

JAMA, 134

plagiarism, 135–136

project-specific industry financial

and material support,

134–135

spin, 139

Evidence-based clinical review

American Family Physician

journal, 157–158

attention, quality, 157

EBM sources, 157

sites list, 156, 157

Evidence-based medicine (EBM),

156, 157

F

Fellowships, 318

Figures

algorithms

clinical reasoning, 103–104

construction, 104

decision tree, 103

description, 102–103

submission, manuscript, 104

article, 96

construction tips, 97

description, 95–96

graphs

computers, 102

types, 100, 102

ICMJE instructions, 96

line drawings

computer, 100, 101

illustration, 99

JAMA and NEJM, 99–100

medical illustrator, 100

photographic images

color art, 97–98

construction tips, 97

half tone art, 97

prints, 98

x-rays, 98

First draft beginning

delaying tactics, 74

getting stuck

early draft writing, 76

unstuck methods, 76–77

stage setting, 72–73

starting, diverse ways, 73–74

type first words, 73

words, 74–75

FOIA. See Freedom

of Information Act

Formal tables, 92, 93

Freedom of Information Act (FOIA),

245

G

Grant proposal

appendix/supplementary items

affiliation agreement, 254

consent form and biographical

summaries, 255

references, 255

support letters, 254

awards, 240

budget and justification, 252–253

components, 248, 249

errors, 261–262

executive summary, 249–250

funding sources

government, 241–242

non-governmental, 243–244

future funding plans, 253–254

getting grants, 262–263

grantsmanship, 259

information sources, 263

institution overview, 250

methods, 251–252

money, 239

National Institutes of Health

(NIH), 239–240

362

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Index 363

objectives/research question, 251

principles, 255–257

problem/background, 250–251

rejection, 260–261

research protocol, 240–241

review process, 257–258

timeline, 252

“tournament” model, 240

writing applications

ACE program, 248

budget planning, 247–248

intent letter, 246–247

program officer, 245–246

review, past, 245

RFP, 244–245

title, 248

Grantsmanship, 259

H

HAGS. See Hypocupremia after

gastric surgery

Harrison’s Principles of Internal

Medicine, 16, 177, 198

Health Resources and Services

Administration (HRSA),

241, 242

HRSA. See Health Resources and

Services Administration

Hypocupremia after gastric surgery

(HAGS), 223–224

I

ICMJE. See International

Committee of Medical

Journal Editors

Idea incubation, 33–34

ILSCLAGS. See Incidence of low

serum copper levels after

gastric surgery

IMRAD model. See Introduction,

methods, results and

discussion model

Incidence of low serum copper

levels after gastric surgery

(ILSCLAGS), 223–225

“Informal refereeing”, 86

Information sources, grant

seeking, 263

Institutional Review Board (IRB)

consent form, poorly written, 236

ethical issues, 232

research protocol template, 220

International Committee of Medical

Journal Editors (ICMJE)

instruction, authors, 277–278

instructions, 95, 96

member journals, 234

model, 112

Uniform Requirements, 23, 284

Introduction, methods, results and

discussion (IMRAD) model

abstract

authors instructions, JAMA, 273

described, 272

technical basis, 273

Uniform Requirements, 272

well-written structured,

272–273

acknowledgments, 282–283

authors

inflation, 271

issues, 270–271

listing, 271–272

rank order, 271

discussion

biased collection, 280–281

generalizability, 280

phrase, 280

summary, conclusions, 281

elements, 269

introduction

background, 275

problem, 274–275

research question, 275–276

technical issues, 276

key words, 274

methods

description, statistics, 277

headings, 276

ICMJE instruction, 277–278

publications, 278, 279

reproducibility, 276–277

subjects, 277

survey instruments, 277

original research report, 37

references

363

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364 Index

Introduction, methods, results and

discussion (IMRAD) model

(Continued)

citation, 281

description, 281

“merit badge”, authors, 281

suggestions and comments,

281–282

results

findings, logical sequence,

278–279

tables and figures, 279–280

title

description, 269

instructions, authors, 270

JAMA article and phrases, 270

misunderstanding, author’s

intent, 269–270

as newspaper headline, 270

trial registration, 274

IRB. See Institutional Review Board

J

JAMA. See Journal of the American

Medical Association

Journal of the American Medical

Association (JAMA)

articles, 99

described, 266

instruction

graph and chart requirements, 102

line drawings, 99

photographic images, 97

reference citations, 112

table construction and

submission, 94–95

tables submission, 95

title, 270

K

Keytlaw, 109

L

Laboratory reference values, adults

blood gases, 344

lipid panel, 344

tests

clinical chemistry, 343, 344

hematology and coagulation,

344–345

thyroid function, 344

The Lancet

description, 266

editor of, 285

Impact Factor, 120

Letter to editor

early stage, 169

instruction list

and submission, 174

journal editors, 169

publication option, 170

readers and publishers, 169

types

add new idea, 170–171

Attaboy, 170

disagreement, 171

Gotcha, 172

issue, standard of care, 172

perspective, 171

review article transform,

172–173

sharing, 172

“sounding off”, 172

statement, 171–172

writing letter

cite reference, 174

identify paper, 173

literature-based evidence, 174

reason, 173

successful letter, 173

summary statement, 174

think of, 173

Literature review

difficulties, 153–154

Journal of General Internal

Medicine (JGIM), 153

long list references, 152

medical writing, useful

purposes, 152–153

modern technology, 153

recent article, 153

state of art, 152, 153

“The Little Red Book”, 115

M

Manuscript submission

364

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Index 365

checklist, 295–296

electronic

advantages, 296

vs. old method, 296–297

online composing, 297

mistakes

spell checker, 297–298

touting and perfection seeking,

298

Medical abbreviations, 340–342

Medical books, thoughts

effort, 214–215

market rules, 215–216

professional and trade

description, 213–214

publishing companies, 214

publishing and personal

relationships, 216

serendipity and chance, 215

Medical journals

broad-based peer-reviewed

definition, 116

NEJM, BMJ and JAMA, 116–117

clinicians

grazing habit, 121–122

hunting and gorging, 122–123

controlled-circulation

indexing and impact factor,

118–119

“throw-aways”, 117–118

impact factor

clinicians, 121

description, 119–121

The Lancet, 120

variables, 121

index databases, 119

overstatement and hubris, 128–129

“right”

abbreviations, 126–127

accuracy and precision, 125

acronyms, 127–128

medical jargon and slang,

123–124

stance problem, 128

specialty oriented

peer-reviewed, 117

understatement and waffling,

129–130

Medical subject headings (MeSH),

21, 274

MeSH. See Medical subject headings

Methodological and statistical terms

absolute risk, 346

bias, 346

case-control study, 346

Cochrane collaboration, 347

confidence interval (CI), 347

cross-sectional study, 348

hazard ratio (HR), 348

likelihood ratio (LR), 348–349

post-test probability, 349

precision, 350

pre-test probability, 350

prevalence, 350

primary outcome, 351

prospective study, 351

qualitative research, 351

relative risk reduction (RRR), 352

retrospective cohort study, 352

statistical significance, 353

stratification, 353

systematic review, 353

Microsoft (MS) Word program, 7,

17, 18, 280, 287

Mistakes

article structure, 38

long article, 159

outline, major heading, 158

references, 159

stale rehash, 158

submission, wrong journal, 158

timely topic, 158

unimportant topic, 158

Misuse words, 62

MS. See Microsoft

N

NEJM. See New England

Journal of Medicine

New England Journal

of Medicine (NEJM)

electronic document, 296

error notice, 125

instructions, 100, 104

JAMA and, 99–100

medical students teaching, 170

365

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366 Index

New England Journal of Medicine

(NEJM) (Continued)

online publishing, 321

presubmission inquiries/fast

track, 291

requirements, 105–106

research report, 167

O

Occam’s razor principle, 83

Onomatopoeic words, 58

Open access (OA) publishing

advantages, 323–324

BMJ, 322–323

commercial and non-profit

publishers, 324

described, 322

P

Paragraph development

exception, classic format, 39–40

meaning, 38

organizing, 40

reader consideration, 42–43

small essay, 38–39

steps, 39

topic sentence, 39

using concrete examples, 41–42

Peer review, 299–301

PI. See Primary investigator;

Principal investigator

Prewriting

article concept and structure, 69

copyeditor work, 67

pick area, 67

sinusitis, general topic, 66–67

topic thinking, 65

Primary investigator (PI), 225

Principal investigator (PI)

experience and resources, 262

grant proposal, components,

248, 249

The Principles and Practice of

Medicine, 8, 189

Proofreader’s marks, 339

Proofreading

copyeditor’s role, 310–311

galley and page proofs, 311

marks, 312

reference list, 311–312

Publication models

egalitarian, 185

irony and humor, 186

medicine history, 184

movie reviews, 184–185

newspaper column, 186–187

poetry, 183

practical pointers, 33–34

practice tips, 185–186

publication opportunities, 183

x-ray/photo quiz, 184

Publisher

“Clinician’s Corner”, 145–146

contact information list, 146–148

contacting, 146

Elsevier, 117

favor, new author, 146

MedReviews, 146

New England Journal of Medicine

(NEJM), 145

prestigious journals, 145

regular article, 145

Springer, 106, 216

supply, review papers, 146

Punctuation

commas, 48

periods and question marks,

49–50

semicolons, 49

R

Random thoughts, medical writing

history, 7–9

reading

diverse items and various

reasons, 9

latest known advances, 9

regular and constant, 9

seek information and general

knowledge, 9

structure, 9

style and nonmedical books, 10

time-capsule items collection, 10

writing

career topics, 12–14

creativity, 11–12

professionals, 13

story telling, 11

366

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Index 367

Readers

attention, 143

clinicians, experts and attorneys,

148

content thinking, 143

nationally known specialists, 149

referring physicians, 149

relaxation readers, 148

Rejection letter

appealing the decision, 302–303

causes, article, 302

examples, 304–305

reviewers’ remarks, 303

second submission, 303–304

RePORT. See Research portfolio

online reporting tools

Request for proposal (RFP)

description, 244–245

font and margin, document, 256

instructions

curriculum vitae,

investigators, 234

writing, research protocol,

219–220

language, 255

project

budget, 233

summary, 226

signals, 261

Research portfolio online reporting

tools (RePORT), 245

Research protocol

background and rationale, 226

budget and grant, 233

characteristics, 234–235

clinical trial registration and

appendix, 234

collaborations, 233

“critical-reader” colleague, 236

dissemination, results, 231

draft title

acronym-named randomized

trials, 224–225

reader’s perspective, 223

ethical considerations, 232

expected outcomes, 231

follow-up and data

management, 230

format, 222–223

hypothetical study, 223

investigators

activity, 234

curriculum vitae, 234

IRB, 220

links, projects, 233–234

PI and co-investigators, 225

possible problems, 231–232

problems, 235–236

project management, 232

project summary

PICO model, 225

quality, questions, 225–226

RFPs and language, 226

vs. proposal, 219

quality assurance, 230–231

RFP, 219–220

safety considerations, 228, 230

serum copper levels, 224–225

study

control groups and sample

size, 227–228

design, 227

goals and objectives, 227

statistical tests, 228

timeline, 228, 229

team assembling, 221

Resources assembling

books

dictionaries, 15

inter-specialty reference, 16–17

specific reference, 16

computer programs

drug reference, 18

electronic medical dictionary,

17–18

spell check, 18

thesaurus, 17

web sites

BioMedLib.com, 21–22

book list and information, 18

charge subscription fee, 18

Google and Google Scholar,

19–20

MDConsult, 22

MEDLINE/PubMed, 20–22

MS uniform requirements,

biomedical journal, 23

professionals information, 18

367

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368 Index

Resources assembling (Continued)

search Boolean, 19

UpToDate, 22–23

writing area, 14–15, 17–18

Review article writing

clinical presentation and current

status, 145

combine categories, 145

concept and structure,

143–144

evidence-based clinical review

(see Evidence-based

clinical review)

journal’s impact factor, 143

learning disorders, epilepsy, 145

literature review

(see Literature review)

management, 145

material, 144–145

mistakes (see Mistakes)

planning

begin work, 149

consulting, journal editor,

151–152

organize topic, 149–151

publisher (see Publisher)

readers (see Readers)

respect and organizing data, 143

review paper, 144

splenomegaly, 145

systematic review

and meta-analysis

(see Systematic review

and meta-analysis)

traditional types, 145

types, 144

Review process

archival author

and evaluations, 301

editor’s role, 298

journal editor’s decision

acceptance letter, 306

rejection letter, 302–305

revision letter, 305–306

role and duties

editor, 300–301

peer reviewer, 299–300

secrets

authors and affiliations,

308–309

editorial conflict, interest, 310

journal space and industry-

sponsored studies, 309–310

native language, 307–308

peer review, 306–307

Revision letter, 305–306

Revision work

clarity

crystal-clear, 79–80

meaning, 79

misuse, Thesaurus, 82

MS Word Thesaurus, 80

neophyte, 80–81

plural words, 82

weighty words and sentences, 80

words and constructions, 80

“wrote of” and “referred to”, 81

critical reader, 86–87

danger signs

cuteness, 85

red-flag phrases, 84

statement, 85

stuff removing

critical reader, 86–87

danger signs, 84

edit, 77

editing vs. revision, 78

meaning, 82

Occam’s razor principle, 83

paragraphs and sections, 83–84

pre-final drafts, 78–79

removing stuff, 82–83

time to make, 77

words, 83

style

description, 79

straightforward and unadorned

writing, 79

RFP. See Request for proposal

S

Self-publication

agent and publisher, 319–320

described, 319

Erbonia Books, 320–321

vanity vs. subsidy press, 320

368

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Index 369

Sentences

active vs. passive voice, 43–45

construction

cadence, 48

density, 46–47

variation, beginning, type and

length, 46

verbs, 56

words per sentence, 45

misplaced phrases, 50

punctuation

commas, 48–49

periods and question marks,

49–50

semicolons, 49

verbose phrases, 50–51

SERR. See Systematic evaluation of

research risks

SMART. See Specific, measurable,

achievable, relevant and time

Specific, measurable, achievable,

relevant and time

(SMART), 227

Start-up ideas and handling

data collection and organization

basic research tools, 68

data phase, 67

notes, 68–69

outlines, 69–71

over-prepare, 72

references, 71–72

final draft, 87–88

first draft, beginning

stage setting, 72–73

stuck, 76–77

tactics delaying, 74

where and how to begin, 73–74

words, 74–75

prewriting

article concept and structure, 69

copyeditor work, 67

pick area, 67

sinusitis, general topic, 66–67

topic thinking, 65

revision work

critical reader, 86–87

danger signs, 84

edit, 77

editing vs. revision, 78

pre-final drafts, 78–79

removing stuff, 82–83

style and clarity, 79–80

time to make, 77

Stedman’s Electronic Medical

Dictionary, 15, 17

Stops, 48

Stuff removal

first draft, 82

Occam’s razor principle, 83

paragraphs and sections, article,

83–84

words, 83

Submission letter, 293, 294

Systematic evaluation of research

risks (SERR), 230

Systematic review and meta-

analysis

data-oriented, 154–155

qualitative, 154

safety and efficacy, 156

scientific investigation, 154

systematic review, 155–156

value, 154

T

Tables

advantages, 92

borrowing, 93–94

construction tips, 94

description, 91–92

journal editor’s expectation

footnotes and submission, 95

JAMA, 94–95

types and characteristics,

92, 93

Taylor’s rules, medical writers,

325–326

Technical issues

borrowed materials and

permissions

author’s responsibility, 111

description, 107

illustrations and permissions

cost, 111

legal issue, 109

necessity, 108

369

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370 Index

Technical issues (Continued)

online requisition, 111–112

“public domain”, 108

qualifications, 112

sample letter, 109–110

text usage, 108–109

U.S. Copyright Office web site,

107–108

copyright

act, 105

intellectual property rights,

105–106

ownership, 106–107

protection, 104–105

description, 91

figures, 95–104

reference citations

number, 112

types, 112–113

use, 113–114

tables, 91–95

Text table, 92, 93

Trade books, 190

U

“Uniform Requirements”, 23, 95,

272, 277, 281, 284, 334, 338

W

Web sites

BioMedLib.com, 21–22

book list and information, 18

charge subscription fee, 18

Google and Google Scholar, 19–20

MDConsult, 22

MEDLINE/PubMed, 20–22

MS uniform requirements,

biomedical journal, 23

professionals information, 18

search Boolean, 19

UpToDate, 22–23

Words

basic tool, 52

choosing

annoyance, 60–61

misuse words, 62

precise manner, 59–60

right words, 59

difficulties, 52

medical words understanding

Anglo-Saxon tongues, 53

etymologic derivation, 52

Latininization, 52

literature/mythology, 53

middle English, 53

origins, medical words, 53–54

post-renaissance era, 52–53

using, clinical care, 52

short, 52

type of

eponyms, 58–59

metaphor and similes, 57–58

modifiers, 56–57

nouns and pronouns, 55

onomatopoeia and

alliteration, 58

verbs, 56

Words and phrases

author, 331

Boolean logic, 331

camera-ready copy, 331

compositor, 331

copyeditor, 332

grey literature, 333

IMRAD, 333

JPEG, 334

mark-up, 334

meta-analysis, 335

proofreader’s marks, 336

running head, 337

science citation index (SCI), 337

target journal, 337

trade book, 337

typesetting, 337

Words per sentence, 45

Writer, key questions

reader and patient, 25

requirement and publishing

author and editor, 24

refereed journals, 25

right audience, 24–25

target journal, 25

significance work and attention,

24–25

Writing and publishing

article submission plan

370

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Index 371

aiming high, 289–290

good and bad manuscripts,

291–293

journal selection, 288–289

working, journal editors,

290–291

errors

labeling, 312–314

origination, 312

publication rate vs. career age,

312–314

warning label, 314

goals, author and editor, 288

paper revision and printing,

287–288

performance and responses,

324–325

post-publication steps

AMWA, 319

contests, 318–319

criticism, 315–317

fellowships, 318

file saving, 314–315

reprints, 315

self-publication, 319–321

writing groups and courses,

317–318

proofreading, 310–312

review process

archival author and

evaluations, 301

editor’s role, 298

journal editor’s decision,

302–306

peer review, 299–301

secrets, 306–310

technical requirements

literature review update, 295

manuscript checklist, 295–296

manuscript submission,

296–298

submission letter, 293, 294

title page, 293, 295

transformation

OA, 322–324

web 2.0 and NEJM, 321

writers

task, 325

Taylor’s rules, 325–326

Writing books

authored, 190–191, 210–213

book chapters, 191–197

edited, 190–191, 197–210

medical, 189–190, 213–216

Principles and Practice of

Medicine, 189

Writing groups and courses,

317–318

Writing motivation

ability to endure rejection, 2

aspire and determination, 2

assembling resources

books, 15–17

computer programs, 17–18

early steps, 26–29

web sites, 18–23

writing area, 14–15

beginners

book reviews, 27

case report, 27

editors, 27

leading models, 27

need research data, 26

research team and senior,

26–27

topics, 27–28

develop itch writing, 2

early success, 28–29

effort and print work, 2

form and content, 2

key questions, writer, 24–26

knowledge and technical skills, 1

medical literature and articles, 2

mistakes, 28

random thoughts

history, 7–9

reading, 9–10

writing, 10–14

reasons for non writing

colleagues and secretarial help,

7

issues, 5

lack ideas, 6

self-confidence, 7

timing, 5–6

World Wide Web usage, 7

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372 Index

Writing motivation (Continued)

reasons for writing

broad generalization, 4

clinician investigators and

educators, 4–5

conducting workshops, 3

in-depth knowledge, 4

intellectual stimulation, 5

non profit making, 3

pleasant side effect, 5

reasons, 3–4

understand issues, 1

writer, clinician/faculty, 1

Writing skills

article structure, 35–38

description, 31

fundamental English 101, 31

idea development

good idea, 32–33

incubation, 33–34

topic focusing, 34–35

paragraph development, 38–43

sentences

active vs. passive voice, 43–45

construction, 45–58

misplaced phrases, 50–51

punctuation, 48–50

verbose phrases, 50–51

topic, 31

words

choosing, 59–63

medical words understanding,

52–54

type of, 55–59

Writing team

advantages, 130

guidelines, 131–132

problems, 132–133

Written Communication

in Family Medicine,

196, 198

Z

Zombie, 293

372