adding a new dimension to the study ... - membership.agu.org€¦ · a adding a new dimension to...

1
Adding a New Dimension to the Study of Calcareous Plankton Response to Ocean Acidification Rosie L. Oakes 1 , Jeffrey M. Urbanski 2 , and Timothy J. Bralower 1 1 Department of Geosciences, The Pennsylvannia State University, University Park, PA, USA 2 GE Measurement & Control, Lewistown, PA, USA PP11A - 1323 Anthropogenic activities are increasing atmospheric carbon dioxide levels at unprecedented rates • It is thought that, since 1800, ~30% of this carbon dioxide has been absorbed into the oceans (Sabine et al., 2004) • The dissolution of carbon dioxide into the ocean affects ocean chemistry by decreasing the concentration of carbonate ions and decreasing the pH • Pteropods are holoplaktonic gastropod molluscs which live in the surface oceans and form their shells out of aragonite, the more soluble form of calcium carbonate. • Because pteropods form aragonite shells, they will be among the first organisms to be impacted by ocean acidification. • Culture and incubation experiments have shown that elevated carbon dioxide levels and decreased carbonate ion concentrations (or saturation) are detrimental to pteropod calcification (Comeau et al., 2009, 2010, Bednaršek et al., 2012a, 2012b). There are even some pteropods in the modern ocean feeling the effects of these changing conditions (Bernaršek et al., 2014). The Question 3000 2500 2000 1500 1000 500 0 60 O 40 O 20 O 0 O 20 O 40 O 60 O 30 O E 60 O E 90 O E 120 O E 150 O E 180 O 150 O W 120 O W 90 O W 60 O W 30 O W 0 O JR271 Cariaco JR274 We are interested in how plankton reacted to past change and therefore be able to predict how they may respond to future change. In order to do this, we first need to understand what their condition is in the modern ocean. How does the shell thickness and shell volume of pteropods vary with varying ocean chemistry in the modern ocean? Thus far the conditions of modern pteropods and cultured pteropods have been assessed using light microscopy and SEM imagery (e.g. Gerhardt and Henrich, 2001, Bednaršek et al., 2012a, 2012b, 2014). Future changes in pteropod shell morphology are likely to be small and non-lethal (Bednaršek et al., 2012b). Advances in computer tomography mean that it is now possible to image these shells in 3D at micron scale resolution, adding a new dimension to the study of modern pteropods. We are working towards making a high resolution, modern day baseline dataset to which future changes can be compared. Introduction Methods • Pteropods were studied from three locations: the Arctic Ocean (JR271) (Leaky et al., 2012), the Cariaco Basin (Thunell lab), and the Southern Ocean (JR274) (Tarling et al., 2013). • Individual pteropods were weighed on a Mettler Toledo microbalance (accurate to +/- 0.1μg) and imaged in two dimensions on a Zeiss Stemi 2000-C light microscope using a Canon Powershot G9. • Individual specimens were then mounted onto carbon tape and scanned using a phoenix v|tome|x m at GE Measurement & Control in Lewistown, PA (Figure 2d, e). • Each scan takes ~1 hour and the data is ~2 GB. The voxel size is 1 – 2 μm depending on the size of the pteropod. • Data was reconstructed using GE Datos and VG Studio Max 2.2 software. Figure 1: Sample locations for this study overlain on a map aragonite compensation depth adapted from Feeley et al, (2004) Results • A total of 51 pteropods were scanned from three locations. There is no trend between the normalised shell volume and omega aragonite (Figure 3). The scan images show shells condition doesn’t seem to correlate with omega aragonite. • Shell volume is calculated as the sum of voxels which fall within a selected greyscale range. The selected greyscale range is different for each sample and is designated using the automatic surface determination module in VG Studio Max 2.2 software. • The diameter of the shell is measured across the widest part of the whorl, parallel to the bottom of the shell using the measurement tool in VG Studio Max 2.2 software. Discussion • All pteropod samples came from areas of the ocean which are currently supersaturated (Ω aragonite >1). There seems to be no trend in normalised shell volume with increasingly supersaturated waters. • There are some changes in shells which are visible by eye (Figure 3) that don’t correlate to changes in Ω aragonite. • The calcification depth of pteropods is still unknown. We focused on the water chemistry at 5 m and 100 m as pteropods are known to be dominant in the top hundred metres (Bathmann et al., 1991; Soils and von Westernhagen, 1978). However, pteropods are known to have a strong vertical migration patterns and have been found as deep as 1000 m (Bernaršek et al., 2012c). • If pteropods calcify deeper than 100 m, we will miss the chemical signal that is driving this change as Ω aragonite does not decrease linerly with depth. • Pteropods have an annual lifecycle and therefore we may be looking at shell change effects which were caused by a water mass that the pteropod was in contact with months before. Conclusions • There is no significant quantifiable effect of Ω aragonite at 5m or 100m on pteropods shells from supersaturated waters. • Shell thickness distributions could be used to highlight specimens which are at risk of being damaged. • Specimens from undersaturated regions need to be measured to complete this study. • CT scanning will be an essential tool enabling us not only to measure change but to pinpoint the location of this change. Figure 3: Volume of aragonite in the shell normalised to shell diameter from three sites compared to the omega aragonite at 5m (open symbols) and 100m (filled symbols). The 3D images show a gradient in speciment quality at these omega aragonite values. Figure 2: Sample preparation a) light microscope image; b) mount on carbon tape; c) raw 2D data from CT scanner; d) internal set up of scanner; e) external image of phoenix v|tome|x m Figure 4: Shell thicknesses in samples from the Arctic Ocean (Limacina helecina) and the Cariaco Basin (Limacina inflata). The mode values between these two sample are statistically different. Figure 5: Shell thickness distribution in one sample. Shells with higher mode values (purple box) look more pristine than those with lower mode values (red box). • Within each sample, there is variation between different specimens. • Pteropods with higher mode values (purple box) look more pristine than those with lower mode values (red box). • This technique seems to be more diagnostic at highlighting vunerable specimens than the normalised volume measurements. Shell thickness analysis We need your help! We want to make a global database of the state of pteropods in the modern ocean Do you have: • Pteropod samples from older collections? • Pteropod samples from upwelling zones? If so, please get in touch! a b c d e Acknowledgements The authors would like to thank B. Marshall and R. Thunell (USC) for samples from the Cariaco Basin, and C. Manno, V. Peck and G. Tarling (BAS) for the Arctic and Southern Ocean samples. Volume Analysis

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Page 1: Adding a New Dimension to the Study ... - membership.agu.org€¦ · a Adding a New Dimension to the Study of Calcareous Plankton Response to Ocean Acidification Rosie L. Oakes 1,

a

Add

ing

a N

ew D

imen

sion

to th

e S

tudy

of C

alca

reou

s P

lank

ton

Res

pons

e to

Oce

an A

cidi

ficat

ion

Ros

ie L

. Oak

es1 ,

Jeffr

ey M

. Urb

ansk

i2 , an

d Ti

mot

hy J

. Bra

low

er1

1 Dep

artm

ent o

f Geo

scie

nces

, The

Pen

nsyl

vann

ia S

tate

Uni

vers

ity, U

nive

rsity

Par

k, P

A, U

SA

2 GE

Mea

sure

men

t & C

ontro

l, Le

wis

tow

n, P

A, U

SA

PP

11A

- 132

3

• A

nthr

opog

enic

act

iviti

es a

re in

crea

sing

at

mos

pher

ic c

arbo

n di

oxid

e le

vels

at

unpr

eced

ente

d ra

tes

• It

is th

ough

t tha

t, si

nce

1800

, ~30

% o

f th

is c

arbo

n di

oxid

e ha

s be

en a

bsor

bed

into

the

ocea

ns (

Sabi

ne e

t al.,

200

4)•

The

dis

solu

tion

of c

arbo

n di

oxid

e in

to

the

ocea

n af

fect

s oc

ean

chem

istr

y by

de

crea

sing

the

conc

entr

atio

n of

car

bona

te

ions

and

dec

reas

ing

the

pH•

Pter

opod

s ar

e ho

lopl

akto

nic

gast

ropo

d m

ollu

scs

whi

ch li

ve in

the

surf

ace

ocea

ns

and

form

thei

r sh

ells

out

of

arag

onite

, the

m

ore

solu

ble

form

of

calc

ium

car

bona

te.

• B

ecau

se p

tero

pods

for

m a

rago

nite

sh

ells

, the

y w

ill b

e am

ong

the

firs

t or

gani

sms

to b

e im

pact

ed b

y oc

ean

acid

ific

atio

n.•

Cul

ture

and

incu

batio

n ex

peri

men

ts

have

sho

wn

that

ele

vate

d ca

rbon

dio

xide

le

vels

and

dec

reas

ed c

arbo

nate

ion

conc

entr

atio

ns (

or s

atur

atio

n) a

re

detr

imen

tal t

o pt

erop

od c

alci

fica

tion

(Com

eau

et a

l., 2

009,

201

0, B

edna

ršek

et

al.,

2012

a, 2

012b

). T

here

are

eve

n so

me

pter

opod

s in

the

mod

ern

ocea

n fe

elin

g th

e ef

fect

s of

thes

e ch

angi

ng c

ondi

tions

(B

erna

ršek

et a

l., 2

014)

.

The

Que

stio

n30

00

2500

2000

1500

1000

500

0

60O

40O

20O

0O 20O

40O

60O

30OE

60OE

90OE

120O

E15

0OE

180O

150O

W12

0OW

90OW

60OW

30OW

0O

JR27

1

Caria

co

JR27

4

• W

e ar

e in

tere

sted

in h

ow p

lank

ton

reac

ted

to p

ast c

hang

e an

d th

eref

ore

be a

ble

to p

redi

ct h

ow th

ey m

ay

resp

ond

to f

utur

e ch

ange

. In

orde

r to

do

this

, we

firs

t nee

d to

und

erst

and

wha

t the

ir c

ondi

tion

is in

the

mod

ern

ocea

n.H

ow d

oes

the

shel

l thi

ckne

ss a

nd s

hell

volu

me

of p

tero

pods

var

y w

ith

vary

ing

ocea

n ch

emis

try

in t

he

mod

ern

ocea

n?•

Thu

s fa

r th

e co

nditi

ons

of m

oder

n pt

erop

ods

and

cultu

red

pter

opod

s ha

ve b

een

asse

ssed

usi

ng li

ght

mic

rosc

opy

and

SEM

imag

ery

(e.g

. Ger

hard

t and

Hen

rich

, 200

1, B

edna

ršek

et a

l., 2

012a

, 201

2b, 2

014)

. •

Futu

re c

hang

es in

pte

ropo

d sh

ell m

orph

olog

y ar

e lik

ely

to b

e sm

all a

nd n

on-l

etha

l (B

edna

ršek

et a

l., 2

012b

).

• A

dvan

ces

in c

ompu

ter

tom

ogra

phy

mea

n th

at it

is n

ow p

ossi

ble

to im

age

thes

e sh

ells

in 3

D a

t mic

ron

scal

e re

solu

tion,

add

ing

a ne

w d

imen

sion

to th

e st

udy

of m

oder

n pt

erop

ods.

We

are

wor

king

tow

ards

mak

ing

a hi

gh r

esol

utio

n, m

oder

n da

y ba

selin

e da

tase

t to

whi

ch f

utur

e ch

ange

s ca

n be

com

pare

d.

Intr

oduc

tion

Met

hods

• Pt

erop

ods

wer

e st

udie

d fr

om th

ree

loca

tions

: the

Arc

tic O

cean

(JR

271)

(L

eaky

et a

l., 2

012)

, the

Car

iaco

Bas

in

(Thu

nell

lab)

, and

the

Sout

hern

Oce

an

(JR

274)

(Ta

rlin

g et

al.,

201

3).

• In

divi

dual

pte

ropo

ds w

ere

wei

ghed

on

a M

ettle

r To

ledo

mic

roba

lanc

e (a

ccur

ate

to +

/- 0

.1μ

g) a

nd im

aged

in

two

dim

ensi

ons

on a

Zei

ss S

tem

i 20

00-C

ligh

t mic

rosc

ope

usin

g a

Can

on

Pow

ersh

ot G

9.•

Indi

vidu

al s

peci

men

s w

ere

then

m

ount

ed o

nto

carb

on ta

pe a

nd s

cann

ed

usin

g a

phoe

nix

v|to

me|

x m

at G

E

Mea

sure

men

t & C

ontr

ol in

Lew

isto

wn,

PA

(Fi

gure

2d,

e).

• E

ach

scan

take

s ~1

hou

r an

d th

e da

ta

is ~

2 G

B. T

he v

oxel

siz

e is

1 –

2 μ

m

depe

ndin

g on

the

size

of

the

pter

opod

. •

Dat

a w

as r

econ

stru

cted

usi

ng G

E

Dat

os a

nd V

G S

tudi

o M

ax 2

.2 s

oftw

are.

Fig

ure

1: S

ampl

e lo

catio

ns f

or th

is s

tudy

ove

rlai

n on

a m

ap a

rago

nite

com

pens

atio

n de

pth

adap

ted

from

F

eele

y et

al,

(200

4)

Res

ults

• A

tota

l of 5

1 pt

erop

ods w

ere

scan

ned

from

thre

e lo

catio

ns.

• Th

ere

is n

o tre

nd b

etw

een

the

norm

alis

ed sh

ell v

olum

e an

d om

ega

arag

onite

(Fig

ure

3).

• Th

e sc

an im

ages

show

shel

ls c

ondi

tion

does

n’t s

eem

to c

orre

late

with

om

ega

arag

onite

.

• She

ll vo

lum

e is

cal

cula

ted

as th

e su

m o

f vo

xels

whi

ch f

all w

ithin

a s

elec

ted

grey

scal

e ra

nge.

• T

he s

elec

ted

grey

scal

e ra

nge

is d

iffe

rent

for

eac

h sa

mpl

e an

d is

des

igna

ted

usin

g th

e au

tom

atic

su

rfac

e de

term

inat

ion

mod

ule

in V

G S

tudi

o M

ax 2

.2 s

oftw

are.

• The

dia

met

er o

f the

shel

l is m

easu

red

acro

ss th

e w

ides

t par

t of t

he w

horl,

par

alle

l to

the

botto

m o

f th

e sh

ell u

sing

the

mea

sure

men

t too

l in

VG

Stu

dio

Max

2.2

softw

are.

Dis

cuss

ion

• A

ll pt

erop

od sa

mpl

es c

ame

from

are

as

of th

e oc

ean

whi

ch a

re c

urre

ntly

su

pers

atur

ated

(Ω a

rago

nite

>1)

. The

re

seem

s to

be n

o tre

nd in

nor

mal

ised

shel

l vo

lum

e w

ith in

crea

sing

ly su

pers

atur

ated

w

ater

s.•

Ther

e ar

e so

me

chan

ges i

n sh

ells

whi

ch

are

visi

ble

by e

ye (F

igur

e 3)

that

don

’t co

rrel

ate

to c

hang

es in

Ω a

rago

nite

. •

The

calc

ifica

tion

dept

h of

pte

ropo

ds is

st

ill u

nkno

wn.

We

focu

sed

on th

e w

ater

ch

emis

try a

t 5 m

and

100

m a

s pte

ropo

ds

are

know

n to

be

dom

inan

t in

the

top

hund

red

met

res (

Bat

hman

n et

al.,

199

1;

Soils

and

von

Wes

tern

hage

n, 1

978)

. H

owev

er, p

tero

pods

are

kno

wn

to h

ave

a st

rong

ver

tical

mig

ratio

n pa

ttern

s and

hav

e be

en fo

und

as d

eep

as 1

000

m (B

erna

ršek

et

al.,

201

2c).

• If

pte

ropo

ds c

alci

fy d

eepe

r tha

n 10

0 m

, w

e w

ill m

iss t

he c

hem

ical

sign

al th

at is

dr

ivin

g th

is c

hang

e as

Ω a

rago

nite

doe

s no

t dec

reas

e lin

erly

with

dep

th.

• Pt

erop

ods h

ave

an a

nnua

l life

cycl

e an

d th

eref

ore

we

may

be

look

ing

at sh

ell

chan

ge e

ffect

s whi

ch w

ere

caus

ed b

y a

wat

er m

ass t

hat t

he p

tero

pod

was

in

cont

act w

ith m

onth

s bef

ore.

Con

clus

ions

• Th

ere

is n

o si

gnifi

cant

qua

ntifi

able

effe

ct

of Ω

ara

goni

te a

t 5m

or 1

00m

on

pter

opod

s sh

ells

from

supe

rsat

urat

ed w

ater

s.•

Shel

l thi

ckne

ss d

istri

butio

ns c

ould

be

used

to h

ighl

ight

spec

imen

s whi

ch a

re a

t ris

k of

bei

ng d

amag

ed.

• Spe

cim

ens f

rom

und

ersa

tura

ted

regi

ons

need

to b

e m

easu

red

to c

ompl

ete

this

stud

y.

• C

T sc

anni

ng w

ill b

e an

ess

entia

l too

l en

ablin

g us

not

onl

y to

mea

sure

cha

nge

but

to p

inpo

int t

he lo

catio

n of

this

cha

nge.

Fig

ure

3: V

olum

e of

ara

goni

te in

the

shel

l nor

mal

ised

to s

hell

diam

eter

fro

m th

ree

site

s co

mpa

red

to th

e om

ega

arag

onite

at 5

m (

open

sym

bols

) an

d 10

0m (

fille

d sy

mbo

ls).

The

3D

imag

es s

how

a

grad

ient

in s

peci

men

t qua

lity

at th

ese

omeg

a ar

agon

ite v

alue

s.

Fig

ure

2: S

ampl

e pr

epar

atio

n a)

ligh

t m

icro

scop

e im

age;

b)

mou

nt o

n ca

rbon

tape

; c)

raw

2D

dat

a fr

om C

T s

cann

er;

d) in

tern

al

set u

p of

sca

nner

; e)

ext

erna

l im

age

of

phoe

nix

v|to

me|

x m

Fig

ure

4: S

hell

thic

knes

ses

in s

ampl

es f

rom

the

Arc

tic O

cean

(L

imac

ina

hele

cina

) an

d th

e C

aria

co

Bas

in (

Lim

acin

a in

flat

a). T

he m

ode

valu

es b

etw

een

thes

e tw

o sa

mpl

e ar

e st

atis

tical

ly d

iffe

rent

.

Fig

ure

5: S

hell

thic

knes

s di

stri

butio

n in

one

sam

ple.

Sh

ells

with

hig

her

mod

e va

lues

(pu

rple

box

) lo

ok m

ore

pris

tine

than

thos

e w

ith lo

wer

mod

e va

lues

(re

d bo

x).

• W

ithin

eac

h sa

mpl

e, th

ere

is v

aria

tion

betw

een

diffe

rent

spec

imen

s.•

Pter

opod

s with

hig

her m

ode

valu

es (p

urpl

e bo

x)

look

mor

e pr

istin

e th

an th

ose

with

low

er m

ode

valu

es (r

ed b

ox).

• Th

is te

chni

que

seem

s to

be m

ore

diag

nost

ic a

t hi

ghlig

htin

g vu

nera

ble

spec

imen

s tha

n th

e no

rmal

ised

vol

ume

mea

sure

men

ts.

Shel

l thi

ckne

ss a

naly

sis

We

need

you

r hel

p!W

e w

ant t

o m

ake

a gl

obal

dat

abas

e of

the

stat

e of

pte

ropo

ds in

the

mod

ern

ocea

nD

o yo

u ha

ve:

• Pt

erop

od sa

mpl

es fr

om o

lder

co

llect

ions

?•

Pter

opod

sam

ples

from

upw

ellin

g zo

nes?

If so

, ple

ase

get i

n to

uch!

a b c

d e

Ack

now

ledg

emen

tsTh

e au

thor

s wou

ld li

ke to

than

k B

. M

arsh

all a

nd R

. Thu

nell

(USC

) for

sam

ples

fr

om th

e C

aria

co B

asin

, and

C. M

anno

, V.

Peck

and

G. T

arlin

g (B

AS)

for t

he A

rctic

an

d So

uthe

rn O

cean

sam

ples

.

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