anmar khadra...khadra ral fellow ological modeling itutes of healthitutes of health ay 23, 2011. 1....

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Mathematical M Receptor Receptor Gat Anmar Postdocto Laboratory of Bi National Insti National Insti Monday, M odeling of P2X7 r/Channel r/Channel ting r Khadra oral Fellow iological Modeling itutes of Health itutes of Health May 23, 2011

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  • Mathematical MReceptorReceptor

    Gat

    Anmar

    PostdoctoLaboratory of Bi

    National InstiNational Insti

    Monday, M

    Modeling of P2X7 r/Channelr/Channelting

    r Khadra

    oral Fellowiological Modeling itutes of Healthitutes of Health

    May 23, 2011

  • 1. An Overview

    P2X7Rs are ATP-gated nonseon various cellson various cells.

    Activation of these receptors cagrowth and differentiation.growth and differentiation.

    lective cation channels expressed

    an either cause cell death or cell

  • 1. An Overview

    There are 3 ATP-bindinggNegative cooperativity inReceptor sensitization (ATP b dATPs are bound.

    g sites on P2X7Rs.gn ATP binding is observed.pore dilation) occurs when 3

  • 1. Gating Propertie

    P2X7Rs activate/deactivate eithalmost constant amplitude, or bcurrent amplitude and slowed de

    es of P2X7R

    her monophasically (I1), with iphasically (I1+ I2), with increased 1 2eactivation.

  • 1. Gating Propertie

    I1 rise was best fitted with a monoexponential pfunction. The rate of I1 growth increased with elevation in agonistelevation in agonist.

    4-parameter logistic function was the best fitfunction was the best fit for I2 growth.

    B i i fBest approximation for current deactivation was achieved using gmonoexponential or biexponential fittings.

    es of P2X7R

  • 1. Gating Propertie

    Repetitive agonistRepetitive agonist stimulation led to receptor sensitization

    d dil tiand pore dilation.

    During repetitive stimulation, current amplitude increased pand the deactivation component slowed downdown.

    es of P2X7R

  • 2. Ca2+-Dependenc

    Free-intracellular Ca2+ allosteric

    ce

    cally inhibited receptor activation.

  • 2. Ca2+-Dependenc

    Free-intracellular Ca2+ also facilated receptor pdeactivation.

    ce

  • 3. Modeling of P2X

    Markov state model describingunbinding and sensitization/losP2X7Rs in a cell was used.

    X7R Gating

    g the sequence of binding and ss-of-sensitization events of

  • 3. Modeling of P2X

    F β2/(β2F=αβ2/(β2

    X7R Gating

    2 [DC] 2)2+[DC]e2)

  • 3. Modeling of P2X

    Monophasic and biphasic rMonophasic and biphasic r

    X7R Gating

    responses were generated.responses were generated.

  • 3. Modeling of P2X

    Receptor sensitization was also obtained during repetitive stimulation.

    X7R Gating

  • 4. Understanding

    Ca2+ inhibits BzATP bCa2 inhibits BzATP-b

    Ca2+ effects

    binding to the receptorbinding to the receptor.

  • 4. Understanding

    Ca2+ facilitates receptor deactivation due to increased backward rates.

    Ca2+ effects

  • 5. Conclusions The two current phases may bcontradictory outcomes (apopt

    Receptor sensitization (dilation)phase of the current. Supportedphase of the current. Supported

    Negative cooperativity in ATP biti tisensitization.

    Ca2+ acts as an allosteric inhibitCa acts as an allosteric inhibitforward rates and increasing th

    e responsible for the seemingly osis vs cell differentiation).

    ) is responsible for the second d by the model.d by the model.

    binding is lost during receptor

    tor to P2X7R by slowing down thetor to P2X7R by slowing down the e backward rates.

  • 5. Conclusions The two current phases may bcontradictory outcomes (apopt

    Receptor sensitization (dilation)phase of the current. Supportedphase of the current. Supported

    Negative cooperativity in ATP biti tisensitization.

    Ca2+ acts as an allosteric inhibitCa acts as an allosteric inhibitforward rates and increasing th

    e responsible for the seemingly osis vs cell differentiation).

    ) is responsible for the second d by the model.d by the model.

    binding is lost during receptor

    tor to P2X7R by slowing down thetor to P2X7R by slowing down the e backward rates.

  • 5. Conclusions The two current phases may bcontradictory outcomes (apopt

    Receptor sensitization (dilation)phase of the current. Supportedphase of the current. Supported

    Negative cooperativity in ATP biti tisensitization.

    Ca2+ acts as an allosteric inhibitCa acts as an allosteric inhibitforward rates and increasing th

    e responsible for the seemingly osis vs cell differentiation).

    ) is responsible for the second d by the model.d by the model.

    binding is lost during receptor

    tor to P2X7R by slowing down thetor to P2X7R by slowing down the e backward rates.

  • 5. Conclusions The two current phases may bcontradictory outcomes (apopt

    Receptor sensitization (dilation)phase of the current. Supportedphase of the current. Supported

    Negative cooperativity in ATP biti tisensitization.

    Ca2+ acts as an allosteric inhibitCa acts as an allosteric inhibitforward rates and increasing th

    e responsible for the seemingly osis vs cell differentiation).

    ) is responsible for the second d by the model.d by the model.

    binding is lost during receptor

    tor to P2X7R by slowing down thetor to P2X7R by slowing down the e backward rates.

  • 6. Current/Future W

    Use MCMC method to generategto describe the gating propertie

    Extend this approach to other pExtend this approach to other pP2X2a and P2X2b receptors.

    Estimate the number of binding

    Work

    e the best fit and the best scheme s of P2X7R.

    purinergic receptors including thepurinergic receptors including the

    g sites for Ca2+.

  • AcknowledgemenC ll b tCollaborators:-Arthur Sherman (Laboratory of B

    - Zonghe Yan (Endocrinology andNICHD, NIH)

    -Stanko Stojilkovic (EndocrinologBranch, NICH

    Funding:

    nts

    Biological Modeling, NIDDK, NIH)

    d Reproduction Research Branch,

    gy and Reproduction ResearchHD, NIH)

    ITBITB