aternative candida albicans lifestile
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Alternative Candida albicansLifestyles: Growth onSurfaces
Carol A. Kumamoto and Marcelo D. Vinces
Department of Molecular Biology and Microbiology, Tufts University, Boston,Massachusetts 02111; email: [email protected], [email protected]
Annu. Rev. Microbiol.2005. 59:11333
First published online as aReview in Advance on
May 2, 2005
The Annual Review ofMicrobiology is online atmicro.annualreviews.org
doi: 10.1146/annurev.micro.59.030804.121034
Copyright c 2005 byAnnual Reviews. All rightsreserved
0066-4227/05/1013-0113$20.00
Key Words
biofilm, tissue invasion, invasive growth, thigmotropism, hyphae
Abstract
Candida albicans, an opportunistic fungal pathogen, causes a widevariety of human diseases such as oral thrush and disseminated can-
didiasis. Many aspects of C. albicans physiology have been studied
during liquid growth, but in its natural environment, the gastroin-testinal tract of a mammalian host, the organism associates with
surfaces. Growth on a surface triggers several behaviors, such asbiofilm formation, invasion, and thigmotropism, that are important
for infection. Recent discoveries have identified factors that regulatethese behaviors and revealed the importance of these behaviors for
pathogenesis.
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Contents
INTRODUCTION.. . . . . . . . . . . . . . . . 114
SURFACES COLONIZED BYCANDIDA ALBICANS. . . . . . . . . . . 1 1 5
MECHANISMS OF BIOFILMFORMATION AND
DEVELOPMENT.. . . . . . . . . . . . . . 115Biofilm Formation on Implanted
Medical Devices Results in
Drug Refractory Infections . . . . 115Numerous Parameters Influence
Biofilm Formation andStructure . . . . . . . . . . . . . . . . . . . . . . 116
Multiple Mechanisms Contributeto the High Drug Resistance
of Biofilm Cells . . . . . . . . . . . . . . . 116
High Levels of Amino AcidBiosynthesis and Protein
Synthesis in BiofilmC e l l s . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 7
Defective Biofilm DevelopmentCaused by Mutations that
Alter the Cell Surface and
Compromise Adherence .. . . . . . 118Development of Animal Models
for Biofilms . . . . . . . . . . . . . . . . . . . 118
MECHANISMS OF INVASIVEGROWTH . . . . . . . . . . . . . . . . . . . . . . 119
Tissue Invasion byC. albicans
Hyphae Occurs on Epithelial,Epidermal, and Endothelial
Surfaces DuringCandidiasis . . . . . . . . . . . . . . . . . . . . 119
Protease and PhospholipaseActivities Contribute to
Invasion of Host
Tissue . . . . . . . . . . . . . . . . . . . . . . . . 119Filamentation During Invasive
Growth is Promoted byPhysical Contact .............. 120
Transcription Factors RegulatingInvasive Growth by Embedded
C e l l s . . . . . . . . . . . . . . . . . . . . . . . . . . 1 2 0
Signaling Pathways RegulatingInvasive Growth by Embedded
C e l l s . . . . . . . . . . . . . . . . . . . . . . . . . 1 2 3Models for Invasion of Tissue
Surfaces . . . . . . . . . . . . . . . . . . . . . . . 124
GUIDANCE OF HYPHAE BYTHIGMOTROPISM . . . . . . . . . . . . 125
C ONC LUS IONS .. . . . . . . . . . . . . . . . . . 1 2 6
Nosocomial: aninfection thatdevelops within ahospital and isproduced by aninfectious organismacquired during thestay of the patient
INTRODUCTION
In the fourth century B.C., growth ofthe opportunistic fungal pathogen Candidaalbicans on the surface of human tissue wasnoted and the oral infection it causes, thrush,
was described by Hippocrates. Since that
time, the incidence of candidiasis has in-creased and C. albicans has become a sig-
nificant nosocomial pathogen. The modern
AIDS epidemic has created a population ofpatients susceptible to candidiasis; oral thrushis one of the most common opportunistic in-
fections in AIDS patients (4).
As an opportunist, C. albicans does notusually cause serious disease in immunocom-
petent hosts, but immunodeficient hosts aresusceptible to infections ranging from su-
perficial mucosal infections to invasive, life-threatening disease. Candida spp. rank among
the four most common causes of bloodstreaminfections and cardiovascular infections in
U.S. hospitals (18, 41). In neonatal intensivecare units, Candida spp. are an even more fre-
quent cause of bloodstream infections (95).
The advances of modern medicine have ledto larger populations of compromised patients
susceptible to candidiasis, increasing the im-portance of C. albicans as a pathogen and
providing impetus for the detailed study ofC. albicansbiology.
As is typical for many microorganisms,C. albicans physiology has been frequentlystudied during growth in liquid culture. How-
ever, in their natural environment, C. albicans
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cells are commonly found in association
with surfaces. Therefore, it is important tounderstand how C. albicans cells interact
with surfaces and how the unique aspects ofgrowth on surfaces contribute to C. albicans
pathogenicity. Several distinct C. albicans
behaviors occur on surfaces, including
biofilm formation, invasive growth, andthigmotropism. In this review we describethese behaviors and discuss the mechanisms
that regulate them. Each behavior occursunder specific environmental conditions and
is mediated and controlled by specific fungalproteins.
SURFACES COLONIZED BYCANDIDA ALBICANS
C. albicans is generally found as a commen-sal organism in association with a human or
animal host. In one study, 7.1% of infants were colonized by Candida or other yeasts
on the day of birth and 96% of infants wereorally colonized by approximately one month
of age (94). In adults, gastrointestinal car-riage of Candida spp. is common (78). For
example, fungi were found in 80% of fecal
samples from healthy adults (37). Soll et al.(104) showed that several surfaces in the body
can be colonized, including the vaginal wall,surfaces in the oral cavity, and the anorectal
surface.Individuals carry a particular strain for
long periods, but changes in the colonizing
strain over time can also be detected (78). Asingle individual may carryunrelatedstrains at
different sites (104), and changes in the colo-nizing C. albicansstrain have been observed in
HIV-positive patients (109). Thus, coloniza-tion byC. albicansis not fixed and changes may
occur during an individuals lifetime. Within the host, a population of com-
mensal organisms is probably bound to mu-
cosal surfaces. In mice orally inoculated withC. albicans, binding of yeast-form C. albicans
cells to epithelial surfaces in the gastrointesti-nal tract was detected within 3 (82) or 72 h
(51) postinoculation. Another yeast species,
Biofilm: acommunity ofmicroorganismsattached to a surface,formingthree-dimensional
structures containingexopolymeric matrixand cells thatexhibit distinctivephenotypicproperties
Thigmotropism:the directionalresponse of a cell ortissue to touch, orphysical contact witha solid object
Epithelial:pertaining to tissuethat forms the outersurface of the bodyand lines the bodycavities, and to maintubes andpassageways that leadto the exterior, suchas the lining of thegastrointestinal tract
Torulopsis pintolopesii, naturally colonizes mice.
This organism is found in layers bound tothe secreting epithelium of the stomach (97).
These findings demonstrate the ability ofcommensal fungal organisms to adhere to tis-
sue surfaces within the host.In summary, growth on a biological sur-
face, especially in the mammalian gastroin-testinal tract, is part of the natural lifestyleof C. albicans. We discuss below how the in-
teraction of C. albicans with a surface altersC. albicansbehavior andhow these effects con-
tribute to disease.
MECHANISMS OF BIOFILMFORMATION ANDDEVELOPMENT
Biofilm Formation on ImplantedMedical Devices Results in DrugRefractory Infections
A biofilm is a three-dimensional commu-nity of microorganisms embedded in an ex-
opolymeric matrix and attached to a surface.Upon attachment, microorganisms undergo a
change to a sessile (attached) lifestyle. Dental
plaque is a well-known natural example of abacterial biofilm found in humans. C. albicans
also forms a biofilm on dental enamel (61) aswell as on human heart valves, causing endo-
carditis (29).From a human health perspective, biofilms
areimportantbecause they form on implanted
medical devices and result in infections thatare unusually refractory to antimicrobial ther-
apy. Medical device infection contributes toabout half of all nosocomial infections (for
review see Reference 54). Several million vascular and urinary catheters and tens of
thousands of prosthetic heart valves are usedannually in the United States; approximately10% of infections linked to these devices are
due to Candida spp. (54). For example, of theestimated80,000 bloodstream infections asso-
ciatedwith central venouscatheters that occurannually in U.S. intensive care units, 11.5%
are due to Candida spp. (54). The mortality
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Quorum sensing:cell-density-dependentcommunication andcoordination ofmicrobial behavior
via signalingmolecules
rate for device-associated Candida infection is
approximately 30% (54).Cells in a biofilm characteristically exhibit
high resistance to antimicrobial drugs, andtherefore infected devices must usually be re-
moved to cure the infection (54). For somedevices, removal necessitates major surgery
and exposes patients to significant risks. As aresult, the ability of C. albicans to adhere toa medical device and form a biofilm resistant
to antifungal agents represents an importantmedical challenge.
Numerous Parameters InfluenceBiofilm Formation and Structure
Studies have demonstrated that C. albicans
biofilms form in several stages (21, 29). First,
cells, typically yeast form, attach to a surface.Second, cells proliferate on the surface, form-ing microcolonies. Third, growth of cells,
production of hyphae (filamentous forms of
the organism), and secretion of exopolymericmatrix result in elaboration of the characteris-
tic three-dimensional structure that is typicalof a biofilm. The exopolymeric matrix, com-
posed of carbohydrates, proteins, and other
unidentified components, surrounds the cellsin a mature biofilm (11).
Numerous materials and growth mediasupport the growth of biofilms in the labo-
ratory. The structure of the resulting biofilm,especially the proportions of yeast-form and
hyphal-form cells, is strongly influenced by
parameters such as medium composition,temperature, and the nature of thesubstratum
(59). Mutants unable to form hyphae or yeast-form cells can nevertheless produce a biofilm,
demonstrating that a specific morphology isnot strictly essential for biofilm formation
(10). Because the proportions of the differ-ent morphological forms vary depending onenvironmental conditions, biofilm structure is
highly adaptable.The content of exopolymeric matrix is also
influenced by biofilm incubation conditions.Biofilms incubatedstatically contain relatively
low amounts of matrix, whereas biofilms in-
cubated with shaking produce higher lev-els of matrix (42). This effect of medium
flow is also seen with bacterial biofilms (28).
Thus, flow of the medium above the sur-face is another variable that influences biofilm
structure.Quorum sensing alsoregulatesbiofilm for-
mation. The quorum-sensing molecule far-nesol is produced continuously by growingC. albicanscells, accumulating to levels corre-
lated with cell number, andacts as an inhibitorof germination, i.e., the yeast-to-hypha tran-
sition (44). Incubation of cells in the presenceof farnesol leads to reduced biofilm formation
(86). Farnesol also has deleterious effects on
mature biofilms (86), suggesting that farnesolregulates biofilm stability as well as biofilm
formation. Similar effects of quorum sensing
on mature bacterial biofilms have been noted(106).
A two-componenthistidinekinase, Chk1p,
plays a role in the response of cells to far-
nesol. chk1 mutant cells are insensitive to theeffects of farnesol on both germination and
biofilm formation (58). Chk1p is a cytoplas-mic protein that probably functions together
with currentlyunknown proteins to detect thefarnesol signal and produce the appropriate
response.
Thus, biofilms vary in themorphology andorganization of their cells and in their con-
tent of extracellular matrix. The plasticity inbiofilm structure in response to medium com-
position, the substratum, flow conditions, andquorum sensing suggests that biofilms located
in different sites within the host or in associa-
tion with different types of devices or surfacesare likely to differ in their properties.
Multiple Mechanisms Contributeto the High Drug Resistanceof Biofilm Cells
One of the most vexing characteristics ofbiofilms is their high-level resistance to an-
timicrobial drugs (28, 29, 59). Drug resistancereflects a property of individual biofilm cells,
since C. albicanscells released from disrupted
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biofilms still exhibit substantial levels of resis-
tance (8, 9, 85). In C. albicansbiofilms, resis-tance is probably not due to poor penetration
of drugs into the biofilm structure (1); mu-tants that form structurally defective biofilms
nonetheless exhibit high drug resistance (87).In the early stages of biofilm forma-
tion, changes in gene expression contributeto resistance. Resistance to the antifungalfluconazole can be detected as soon as 2 h
after adherence of C. albicans cells (71). Atthis early time point, resistance is strongly de-
pendent on MDR1, which encodes a flucona-zole efflux facilitator. That is, an mdr1 null
mutant biofilm is 16-fold more sensitive to
fluconazole than is a wild-type biofilm. Dele-tion of CDR1 and CDR2, which encode ho-
mologous drug efflux pumps, also decreases
the resistance of adherent cells (71). Simi-lar results were obtained after 6 h of ad-herent growth, and increased efflux activity
in biofilm cells was detected (74). Thus, the
drug-resistant phenotype of biofilm cells atearly times after adherence results from ex-
pression of drug efflux determinants. Over-expression of MDR1, CDR1, and CDR2 is
also important for drug resistance in drug-resistant clinical strains (83).
In mature biofilms (e.g., after 48 h of incu-
bation) the mechanisms that confer drug re-sistance are different. Mature biofilms formed
from mdr1 cdr1 cdr2 triple null mutantsor the various single and double mutants
are highly resistant to drugs (74, 85). Con-
sistent with these observations, expressionof the drug efflux determinants in mature
biofilms is not high (34, 74) and efflux ac-tivity of mature biofilms is not higher than
the activity in planktonic cells (74). Theseresults argue against a role for the efflux
determinants in drug resistance in maturebiofilms.
Decreased membrane ergosterol content
(74) and altered expression of ergosterolbiosynthetic genes (34) in mature biofilm cells
have been noted. Therefore, increased drugresistance in mature biofilms may be related
to an alteration in membrane sterol content.
Altered membrane composition could resultin changes in membrane properties such as
decreased permeability to drugs, leading to
higher drug resistance. An alternative model has proposed that
most Pseudomonas aeruginosa cells in abiofilm exhibit similar antibiotic resistance as
stationary-phase planktonic cells but that thebiofilm also contains a population of highly
resistant persister cells. The persister cells
are not mutants but rather wild-type cellswhose physiological state allows them to sur-
vive antibiotic treatment (64, 105). By sur-viving antibiotic treatment, the persister cells
allow recovery of the population after an-tibiotic treatment is discontinued. Although
the existence of persister cells in C. albicans
biofilms has not been tested directly, there is
evidence of cellular heterogeneity in C. al-bicans biofilms (108), and thus this mecha-nism could also contribute to biofilm drug
resistance.In summary, multiple mechanisms con-
tribute to the increased drug resistance ex-
hibited by biofilms. Because drug resistancemechanisms seen in early biofilms differ
from those conferring resistance in maturebiofilms, strategies designed to block early
biofilm formation may differ from strategies
that would be effective for eliminating maturebiofilms.
High Levels of Amino AcidBiosynthesis and Protein Synthesisin Biofilm Cells
To understand the distinctive biofilm lifestyleat the molecular level, microarray studies of
gene expression in C. albicans biofilm cellshave been conducted (34). Results revealed
that, in comparison to postlogarithmic plank-tonic cells that had been grown for thesame length of time, cells in biofilms express
higher levels of genes involved in amino acidand nucleotide metabolism, protein synthe-
sis, other metabolic functions, and subcellularlocalization. Garcia-Sanchez et al. (34) pro-
posed that biofilms require high-level protein
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biosynthesis, necessitating increased amino
acid biosynthesis.Interestingly, analyses of gene expression
or protein composition in bacterial biofilmcells compared with postlogarithmic plank-
tonic cells grown for the same length of timeshowed some similarities to the results ob-
tained with C. albicans biofilms (98, 111).Among the proteins or transcripts of genespresent at higher concentration in bacterial
biofilm cells were several gene products in-volved in the synthesis of amino acids and
nucleotides or in protein translation. How-ever, when bacterial biofilm cells were com-
pared with planktonic cells that were in the
exponential growth phase, these differencesin gene expression were not observed (98).
These results imply that biofilms contain cells
whose protein synthesis machinery is func-tioning at the level seen in exponential-phasecells, even though the biofilm has been devel-
oping for a long period.
Defective Biofilm DevelopmentCaused by Mutations that
Alter the Cell Surface andCompromise Adherence
Several mutations that reduce biofilm devel-
opment by compromising the first step inbiofilm formation, adherenceto surfaces, have
been studied. One of these mutations affectsEFG1, a major regulator of hyphal develop-
ment (107). Efg1p regulates numerous genes
whoseproducts include many cell surface pro-teins (62, 77, 103). As a result of the cell
surface defect and the defect in productionof hyphae, it is not surprising that efg1 null
mutants are defective in biofilm development(87). On polystyrene, the defect is evident
during the earliest stages of biofilm develop-ment, i.e., adherence and microcolony forma-tion (87). efg1 null mutants are also defective
in adhering to polyurethane central venouscatheter material (65). TheEAP1 gene, which
encodes a predicted cell wall, GPI-anchoredprotein, is dependent on Efg1p for expres-
sion and may be a critical target of Efg1p.
Expression of EAP1 in nonadherent Saccha-
romyces cerevisiae cells resulted in increased ad-
herence to polystyrene, suggesting that this
surface protein can mediate attachment topolystyrene (66). Therefore, the failure ofefg1 mutants to initiate biofilm formation onpolystyrene may reflect the absence of Eap1p.
Other mutations affect adherence andbiofilm formation. Mutants lacking ACE2,
which encodes a transcription factor that
regulates expression of chitinase and cellwall proteins, exhibit reduced adherence to
polystyrene and reduced biofilm formation(50). Mutants lacking the NOT4 gene, which
encodes a putative E3 ubiquitin ligase, fail to
attach firmly to a serum-coated plastic surfaceand are defective in biofilm formation (57). As
with the efg1 mutant, the absence of Not4p
or Ace2p may alter the surface properties ofC. albicans, leading to the observed defects inadherence and biofilm development.
Adherence ofCandida glabrata leading to
biofilm formation is mediated in part byEpa6p, a cell surface protein. Expression of
EPA6isactivatedunderconditionsthatleadtobiofilm developmentthrough alterationof the
subtelomeric silencing machinery (48). Takentogether, these results demonstrate that alter-
ation of the cell surface by any one of several
mechanisms results in reduced adherence andreduced biofilm development.
Development of Animal Modelsfor Biofilms
Although model systems make analysis of the
structure and development of biofilms acces-sible to study, animal models are necessary
to understand the pathogenesis of biofilm-related disease. Two animal models have been
recently described, one utilizing rabbits (100)and one using rats (5). Both systems involveplacement of a central venous catheter fol-
lowed by direct inoculation ofC. albicanscellsinto the lumen of the catheter. The resulting
biofilms arestructurallysimilar to biofilms de-scribed in laboratory model systems, except
for the possible presence of host cells in the
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biofilm (5). The catheter biofilms also exhibit
drug resistance and express the CDR2 gene,consistent with results obtained in laboratory
model systems (5, 100). In the rat model,biofilm development leads to seeding of the
kidneys with C. albicans, demonstrating dis-seminated disease. These animal models offer
the potential for evaluation of new treatmentsfor biofilm infections based on insights fromlaboratory model systems.
In summary, recent developments haverevealed molecular activities required for
biofilm development. Expression of appropri-ate cell surface molecules for adhesion and
expression of genes needed for high levels
of protein synthesis are critical for successfulbiofilm formation. Mechanisms underlying
antifungal resistance differ in early biofilms
and mature biofilms, indicating that differentstrategies are needed to circumvent this prop-erty of biofilms.
MECHANISMS OF INVASIVEGROWTH
Tissue Invasion byC. albicansHyphae Occurs on Epithelial,Epidermal, and Endothelial
Surfaces During CandidiasisIn superficialcandidiasis, epidermalor epithe-
lial surface invasion by C. albicans hyphae iscommonly observed (79). When fungi colo-
nize an epithelial or epidermal surface, they
adhere to host cells and create depressionsin the surface of the host cells (45, 51, 60,
88). Fungal yeast-form cells also convert tofilamentous hyphae, which penetrate into the
surface.During invasion and traversal of an
endothelial surface, the initial entry of yeast-form cells into endothelial cells is by an endo-cytotic process (22). Damage to the endothe-
lial surface (33, 52) results in exposure of theunderlying basement membrane, which may
then be invaded by hyphal-form cells.In specimens scraped from human oral or
cutaneous lesions, most C. albicans cells are
Endothelial:pertaining to tissuecomposed of a layerof flat squamouscells, such as thoselining blood and
lymphatic vessels andthe heart
found within host cells (20, 70, 73). Access to
the interior of host cells is probably achievedby a combination of enzymatic activities (e.g.,
proteases and phospholipase) and mechani-cal force. Ultrastructural observations reveal
areas of clearing around penetrating hyphae,supporting a role for lytic enzymes during in-
vasion (73, 99, 109). In addition, in samplescollected from cutaneous candidiasis cases,the corneocytes appear deformed as a result
of their interactions with C. albicans, support-ing the notion that C. albicansuses mechani-
cal force to aid penetration (99). Studies withmodel systems using explanted tissue, animal
infection, or cells in culture confirm these fea-
tures of invasion by C. albicans and demon-stratethat C. albicanshyphae may enter or pass
completely through host epithelial or epider-
mal cells with minimal damage to the host cell(16, 32, 46, 88, 114).
In summary, hyphal penetration is a key
component of invasive growth, the process of
penetrating the substratum. Invasion of theepithelial surface allows infecting organisms
to reach thebloodstream,andpenetration anddisruption of endothelial surfaces allow or-
ganisms to escape from the bloodstream andinfect deep tissues. Thus, the invasive behav-
ior ofC. albicanson a biological surface con-
tributes to disease pathogenesis.
Protease and PhospholipaseActivities Contribute toInvasion of Host Tissue
Degradative enzymes secreted by C. albicans
cells are important for tissue invasion. Inhibi-tion of the secreted aspartyl protease (SAP)
class of enzymes with the inhibitor pep-statin decreases tissue invasion (76). Pepstatin
treatment also enhances survival followingintranasal challenge in mice by C. albicans
(31). In addition, several mutants lacking SAP
genes showed decreased invasion (76). Simi-larly, secreted phospholipase activity has been
implicated in tissue invasion. In invading hy-phae, phospholipase activity is concentrated
at the hyphal tip (35, 84); a mutant lacking
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secreted phospholipase B1 exhibits reduced
ability to penetrate cell monolayers (63) ortissue (75). These data strongly implicate se-
creted proteases and phospholipases in suc-cessful invasion.
Filamentation During InvasiveGrowth is Promoted by PhysicalContact
As discussed above, hyphae that are capa-ble of exerting mechanical force on host
cells are characteristically seen in specimenstaken from infected tissue and probably con-
tribute to invasion. Several experimental reg-
imens stimulate hyphal growth in the labora-tory including the use of special media, high
temperature, or microaerophilic conditions
(30, 39). To study invasive hyphal development
specifically, we have used an agar model sys-
tem that mimics some of the features of tissue
invasion.Growth ofC. albicanscells embedded
Figure 1
Invasive growth ofC. albicanswithin host tissue. Sections of fixed tonguetissue from gnotobiotic immunosuppressed piglets orally inoculated with(panel a) wild-type C. albicansor (panel b) efg1 cph1 double null mutantcells. Immunohistochemical analysis with anti-C. albicansantibody isshown. From Reference 91 with permission.
within agarmedium stimulatesthe conversion
of yeast-form cells to filaments that invade themedium (17). Control experiments indicate
that the important cue for hyphal productionis not reduced oxygen levels or gradients of
nutrients but rather physical contact of cellswith agar or other matrixmaterial (17). Unlike
hyphal development stimulated by other cues,invasive filamentation of cells in agar mediumis readily observed in rich medium at low or
high temperature.Studies of immunosuppressed gnotobi-
otic piglets orally inoculated with C. albicans
suggest that contact-dependent filamentation
contributes to invasion of tissue. Theefg1/efg1
cph1/cph1 double mutant strain, which lackstwo transcription factors that regulate fila-
mentation, forms filaments and invades the
tongue of the piglet (91) (Figure 1) or agarmedium (36, 91), but it is defective in fil-amentation under all other conditions (68).
These results suggest that filamentation in re-
sponse to contact with a surface contributesto invasion of epithelial tissue and is de-
pendent on factors other than Efg1p andCph1p.
Transcription Factors Regulating
Invasive Growth by Embedded CellsTo date, many genes that differentially affect
filamentous growth depending on whethercells are grown in liquid or on agar medium
have been identified. These genes and their
phenotypes are summarized in Table 1. Tofocus specifically on the molecular mecha-
nisms underlying the filamentous responseto growth within agar medium, the follow-
ing sections summarize the results of stud-ies that make use of the embedded growth
condition (suspending cells within rich agarmedium).
Of the genes known to regulate inva-
sive growth, several are thought to encodetranscription factors (Table 1). The putative
transcription factor CZF1 plays a key role inregulating the response of cells to embed-
ded conditions. Deletion of CZF1 results in
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Table 1 C. albicansgenes influencing filamentous growth within or on agar media
Gene Filamentation phenotype Putative function Reference(s)
Transcription factors
CPH1 Defective on Spider and SLAD
agar; mild defect within agar
Transcription factor 24, 67
CZF1 Defective within agar Transcription factor 17
EFG1 Hyperfilamentous within agar Transcription factor 36
EFH1 efh1 efg1double mutant
hyperfilamentous within agar
Transcription factor 27
MCM1 Hyperfilamentous when
overexpressed on agar
Transcription factor 93
Signaling components
CEK1 Defective on Lees and Spider agar MAPK 24, 53
CHK1 Defective on serum agar Histidine kinase 117
COS1 Defective on serum and Spider agar Histidine kinase 2, 117
CPP1 Hyperfilamentous and
hyperinvasive on agar
Phosphatase 23
CST20 Defective on Spider agar MAPKKK kinase 24, 53
GAP1 Defective on solid Spider and
SLAD
Amino acid permease 12
GPA2 Defective within agar G-protein -subunit 69a, 72, 96
GPR1 Defective within agar G-protein-coupled receptor 69a, 72
HOG1 Defective in liquid and agar;
hyperinvasive on SLAD agar
MAPK 3
HST7 Defective on Spider and SLAD
agar; hyperfilamentous when
overexpressed within agar
MAPK kinase 24, 53, 96
RAS2 Active allele and mutant defective
within agar
Small G-protein 69a, 96
SLN1 Defective on serum agar Histidine kinase 117
SSK1 Defective on agar; hyperinvasive on
SLAD agar
Two-component response regulator 19
TPK1 Defective on agar PKA catalytic subunit 15
TPK2 Defect in invasive growth of yeast
cells on agar
PKA catalytic subunit 15
Other genes
BMH1 Defective in liquid and within agar;
one allele defective only in liquid
14-3-3 protein 92
FAB1 Defective on Spider and serum agar Phosphatidylinositol 3-phosphate
5-kinase
7
PLD1 Defective on Spider agar;
hyperfilamentous on
cornmeal/Tween agar
Phosphatidylcholine-specific
phospholipase D1
47
RBR1 Defective on acidic M-199 soft agar pH-regulated putative cell wall
protein
69
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MAPK:mitogen-activatedprotein kinase
PKA: protein kinaseA
reduced invasive filamentation. Ectopic CZF1
expression results in accelerated filamenta-tion (17) (Figure 2). Czf1p does not affect
morphogenesis under other conditions, sug-gesting that a unique pathway is stimulated in
embedded cells.Mutation ofCPH1, the C. albicanshomo-
logue of the S. cerevisiae STE12 transcriptionfactor, results in defective filamentous growthin certain media (24, 62, 67) and mildly de-
fective filamentous growth within agar (36).The czf1 cph1 double null mutant is more de-
fective than either single mutant, indicatingthat the two genes have partially overlapping
functions (17).EFG1 encodes a basic helix-loop-helix
transcription factor that is required for hy-
phal development under most laboratory con-
ditions (68, 107). However, C. albicans efg1mutant cells are more filamentous than wild-type cells when embedded (36) (Figure 2a,b).
Thus, underembedded conditions,EFG1 acts
as a negative regulator of filamentous growth.The relatedEFH1 geneisalsobelievedtoplay
a negative role in regulating filamentation inthe embedded condition, perhaps in conjunc-
tion with Efg1p (27). The effects of the efg1
mutation are epistatic to the effects of the czf1
mutation and partially epistatic to the effects
of the cph1 mutation (36), and therefore, theefg1 cph1 double null mutant filaments duringgrowth within agar medium, as noted above.
CZF1 affects filamentation during growthin agar (17). The effects of a CZF1 mutation,
however, are not observed in the absence ofEFG1 (36), which suggests that CZF1 pro-motes filamentation by antagonizing EFG1-
mediated repression. Yeast two-hybrid datasuggest that this effect may involve phys-
ical interaction between Czf1p and Efg1p(36).
The transcription factors Cph1p and
Efg1p each define two distinct signalingpathways that regulate filamentous growth
under many conditions (30). Cph1p is regu-
lated by a MAPK cascade, and Efg1p is reg-ulated by the cAMP/PKA signaling cascade.
The studies described above reveal the exis-
tence of at least two different programs in
which these cascades regulate morphogene-sis (Figure 3). Under the standard condi-
tions used to promote filamentous growth,e.g., the use of inducers such as serum, neutral
pH, microaerophilicconditions, temperature,
Figure 2
Invasive growth ofC. albicanswithin agar medium. Colonies were grown on the surface of agar medium,surface cells were washed off, and the remaining cells that were embedded within the agar werephotographed from the side. White arrowhead shows the top of the agar. Panel a, WT cells; panel b, efg1null mutant cells; panel c, czf1 null mutant cells; and panel d, cells ectopically expressing CZF1 from thepromoter of the C. albicansmaltase gene.
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Figure 3
The standard and embedded programs for regulation of filamentation. Filamentation stimulated bystandard inducing conditions (e.g., serum, 37C, neutral pH, starvation, microaerophilic growth) or byembedded growth requires many of the same signaling components and transcription factors. Notabledifferences include (a) the role of Efg1p as a positive regulator in the standard program and as a negativeregulator in the embedded program, and (b) a Czf1p-dependent pathway that promotes filamentationonly in the embedded program. Bold arrows indicate the relatively greater importance of theEfg1-mediated pathways in both programs. Dashed lines indicate unclear relationships. Blunt arrowsindicate negative effects. Transcription factors are depicted as boxes. For simplicity, many factors withuncertain relationships to these pathways have been left out of the figure but are discussed in greaterdetail in the text.
and nutritional signals (30, 39), hyphal de-
velopment by the standard program requiresEfg1p as a positive regulator. Cph1p performs
a backup, positive function in the standardprogram. During embedded growth, filamen-
tation is promoted by contact with agar orother matrix material. Filamentation under
embedded conditions is controlled by the em-
bedded program, in which Efg1p acts as a
negative regulator and Czf1p functions as anantagonist of Efg1p repressor activity. Thefunction of Cph1p partially overlaps that of
Czf1p in the embedded program. The po-
tential contributions of other transcriptionalregulators of morphogenesis (25) to regula-
tion in the embedded condition are currentlyunknown.
Signaling Pathways RegulatingInvasive Growth by Embedded Cells
The C. albicansgenes GPR1, GPA2, and RAS2
regulate filamentous growth under embed-
ded conditions (69a, 72, 96). GPR1, whichencodes a G-protein-coupled receptor, andGPA2, which encodes a G-protein -subunit
homologue, probably function in transmis-sion of signals. gpr1 and gpa2 mutants are
defective in filamentous growth under vari-ous conditions, particularly during embedded
growth (69a, 72, 96). Recent studies suggestthat GPR1 and GPA2 act in the cAMP-PKA
pathway (69a, 72). These studies demonstrate
suppression of the gpa2 defect by additionof exogenous cAMP. In addition, the gpa2
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mutation is rescued by overexpression ofTPK1, a component of the cAMP-PKA path-
way, but not by overexpression ofHST7, a
member of the MAPK pathway (69a).Under standard inducing conditions, the
small G-protein-encoding RAS1 gene posi-tively regulates filamentous growth and is be-
lieved to act in both the cAMP and MAPKpathways (62a) (Figure 3). Deletion ofRAS1
causes a defect in filamentation under em-
bedded conditions, and this defect can besuppressed by addition of exogenous cAMP,
suggesting a positive role for both RAS1 andcAMP in regulating filamentous growth in
this condition (69a). Although under stan-
dard conditions exogenous cAMP acceler-ates filamentous growth, the influence of
cAMP on filamentation of embedded cells is
unclear.Takentogether, the datasuggest thatunder
embedded conditions the MAPK pathway ac-
tivates a positive regulator, Cph1p, (53) and
promotes filamentous growth, whereas thecAMP-dependent pathway, including RAS1,GPR1, and GPA2, acts on a negative regula-tor, Efg1p, (14) that suppresses filamentous
growth. The signaling components that lieupstream of Czf1p are not yet known.
The two genes encoding isoforms of cat-
alytic subunits of PKA, a component of thecAMP signaling pathway, have distinct roles
in filamentation in liquid and agar media (15).The tpk1 mutant is defective for filamentous
growth on agar media and is only slightly
affected in liquid, and the tpk2 mutant isonly partially defective on agar but is strongly
blocked for filamentation in liquid. The basisfor the differential effects ofTPK1 and TPK2
is currently unclear.Other genes that affect morphogenesis
on agar medium include SLN1, COS1, andCHK1, which encode two-component histi-dine kinases, SSK1, which encodes a response
regulator, and HOG1, which encodes an os-moregulating MAPK gene (2, 3, 19, 117).
These genes may not act within the MAPKor cAMP pathways but rather within indepen-
dent pathways.
The activities of numerous other genesthat specifically affect filamentation on agar
medium have been described, but the mech-
anisms by which they act are incompletelyunderstood. These genes are summarized in
Table 1.
Models for Invasion of TissueSurfaces
Studies of the efg1 and/or the efg1 cph1 dou-ble null mutant in different animal models of
infection reveal two mechanisms for penetra-tion of tissue surfaces. One mechanism occurs
on mucosal surfaces and involves Efg1p-
dependent adherence and proliferation on thesurface, followed by Efg1p-independent pen-
etration of the surface. A second mechanism
occurs on endothelial surfaces and involvesuptake of fungi by endocytosis, followed byintracellular, Efg1p-dependent hyphal devel-
opment that allows fungal penetration of the
surface.The extensive surface growth of wild-type
C. albicans in pseudomembranous oral can-didiasis in the immunosuppressed gnotobiotic
piglet is dependent on Efg1p and is not ob-
served with the efg1 cph1 double null mutant(6). In addition,defects in adhesion ofefg1 null
mutant or efg1 cph1 double null mutant cellsto oral epithelial cells and Caco-2 cells have
been observed (26, 112).In several systems, the overall extent of in-
vasion is reduced in the absence of Efg1p,
probably reflecting defective adherence (26,40, 56, 114). However, invasion of host ep-
ithelium by C. albicans can occur in the ab-sence of Efg1p (91) (Figure 1b). In fact,
invasive growth probably requires downregu-lation ofEFG1 function. This model is based
on the observations that efg1 null mutants arehyperfilamentous and hyperinvasive in agar(36) (Figure 2a,b) and that EFG1 transcrip-
tion is downregulated during filamentation inliquid medium (107, 110).
Therefore, because Czf1p is a negativeregulator of Efg1p (36), Czf1p may act as a
switch that inactivates Efg1p and promotes
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the conversion from surface growth to inva-
sive growth. Activation of the Czf1p switchoccurs as a response to contact with agar or
other matrix material. Czf1p antagonism ofEfg1p is not the only mechanism that pro-
motes invasive filamentation, since there arealso high-temperature-activated mechanisms
that do not require Czf1p (17). The result ofEfg1p and Czf1p activities is the characteris-tic invasion of epithelial surfaces seen in pseu-
domembranous oral candidiasis.In contrast, other host cell types such
as endothelial cells are stimulated to takeup C. albicans cells by endocytosis, and thus
a second mechanism for invasion is promi-
nent on these surfaces. In this situation,invasion is initiated by endocytosis of yeast-
form cells. Within host cells, the fungi un-
dergo Efg1p-dependent formation of germtubes and exit from the host cell. Germina-tion within host cells is defective when efg1
mutant cells are internalized by macrophages
(68) or neutrophils (56). Defective exit by ger-mination and defective endocytosis probably
contribute to the failure ofefg1 mutants to in-vade and damage endothelial cell monolayers
(81).In summary, tissue invasion requires
degradative activities secreted by the invad-
ing C. albicanshyphae and mechanical forcesexerted by the hyphae. The mechanisms
that regulate invasion are adapted to thenature of the surface to which C. albicanscells
are bound. The mechanism for invasion of
mucosal surfaces resembles the embeddedprogram for regulation of filamentation. That
is, following Efg1p-dependent proliferationon the surface, Efg1p is downregulated and
contact-dependent hyphal development en-sues. A second mechanism involving entry of
fungi into host cells via endocytosis followedby intracellular, Efg1p-dependent filamenta-tion and exit from the host cells is important
on endothelial surfaces. In this situation,control of hyphal development resembles the
standard program for regulation of filamen-tation. The cues that promote filamentation
on the two types of surfaces are different and
the molecules involved in controlling hyphalmorphogenesis are used in different ways.
The existence of the two mechanisms for
filamentation contributes to the remarkableversatility ofC. albicansas a pathogen.
GUIDANCE OF HYPHAE BYTHIGMOTROPISM
The direction of C. albicans hyphal growth
can be determined by the topography ofthe substratum. This behavior, known as
thigmotropism, allows hyphae to be guidedby ridges in the substratum (113). In stud-
ies of this behavior, hyphae penetrate the
pores of nucleopore membranes and, afterpenetration, follow the face of the mem-
brane. During penetration, hyphae grow
both away from and toward the agar un-derneath the membrane, implying that theorientation of hyphal growth is not due
to chemotropism but to thigmotropism (38,
101). Helical growth of hyphae occurs whencells are grown on firm surfaces, such as cel-
lophane (102). These thigmotropic responsesto surface features are reminiscent of the
behavior of plant-pathogenic fungi on leaf
surfaces.Thigmotropism plays a major role in the
location of infectable sites on plants by phy-topathogenic fungi. For example, Uromycesappendiculatus, the causative agent of beanrust, produces hyphae that are guided by
the topography of the bean leaf surface to
grow toward stomata, where they differen-tiate into appressoria, specialized structures
needed for invasion of the leaf. Induction ofappressorium formation is caused by archi-
tectural features of the stomatal guard cellsand can be mimicked in the laboratory us-
ing polystyrene membranes bearing ridges ofthe appropriate height. The plant pathogens
Puccinia hordeiandMagnaporthe grisea also use
thigmotropicbehavior on thesurface of plantsto locate openings in the epidermal layer of
plant tissue and initiate invasive growth (43,89, 116). Hence, thigmotropism plays an im-
portant role in guidance of hyphal growth,
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MS:mechanosensitive
in regulation of development, and in disease
progression. Thigmotropism has also been demon-
strated in dermatophytes and in saprophytessuch as Mucor mucedo and Neurospora crassa
(80). Thus, thigmotropic behavior of hyphaeis not restricted to pathogenic fungi; it is a
general feature of fungal hyphae that mustforage for nutrients on surfaces and withinmaterials.
The thigmotropic response ofC. albicans
may be an adaptation for penetrating tissue.
Studies of cultured intestinal enterocytesinfected with C. albicans (115) and of biop-
sies of oral candidiasis taken from AIDS
patients (90) demonstrated orientation of hy-phae along ridges or grooves and penetration
into the regions between enterocytes or cor-
neocytes. The authors suggested that thig-motropism may allow hyphae to locate theintercellular regions.
MS ion channels are found in organisms
from archeans, E. coli, and yeast to higher eu-karyotes (13, 49, 55, 118) and are believed
to play roles in processes such as osmosensa-tion,topographic sensing, touch, and hearing.
MS channels are activated by stretch forceson the plasma membrane, resulting in the
opening of the channels. C. albicanspossesses
MS channel activity. Reorientation of hyphalgrowth in response to ridges is attenuated by
treatment with an inhibitor of MS channels,Gd3+, which suggests that MS channels are
responsible for sensing substrate topography
(113).
To summarize, thigmotropic behavior al-
lows C. albicans to respond with greatprecision to topographical features of the
surface. This behavior may contribute totissue invasion by directing penetrating
hyphae toward more vulnerable regions ofthe tissue. Further studies will illuminate the
details of the molecular mechanisms usedby C. albicans to sense the features of itsenvironment.
CONCLUSIONS
Contact with surfaces elicits unique physio-logical responses in C. albicans. On solid sur-
faces, C. albicanscells form biofilms with char-acteristic three-dimensional structures and
high antifungal resistance. This response to
contact with a surface is significant for hu-man health because of the large numbers
of implanted medical devices used in mod-ern medicine. On tissue surfaces, C. al-
bicans initially adheres and grows on thesurface and subsequently produces invasive
filaments that penetrate the surface. Thisbehavior allows organisms to escape from
their normal niche in the gastrointestinal
tract and reach the bloodstream, settingthe stage for disseminated, life-threatening
infection. Understanding the unique physiol-ogy of C. albicans on surfaces and the adap-
tations of the organism that favor infection,researchers will be better equipped to develop
methods for interrupting the progression to
disease.
SUMMARY POINTS
1. Growth on surfaces is a natural part of the C. albicanslifestyle.
2. The unique physiology of cells growing on a surface makes an important contributionto pathogenesis.
3. Biofilm formation, a behavioral response ofC. albicanscells growing on a surface, is
associated with medical device infection.
4. The morphology and organization ofC. albicansbiofilms are influenced by numerous
parameters, and thus variability may be observed in biofilms located at different siteswithin the host.
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5. Multiple mechanisms contribute to the high resistance of biofilms to antifungal drugs.
6. Secreted degradative enzymes and the hyphal form of growth play key roles during
tissue invasion byC. albicans.
7. Mechanisms that promote invasion of epithelial surfaces differ from mechanisms usedfor invasion of endothelial surfaces.
8. EFG1 regulates several aspects of growth on surfaces, including adhesion, biofilmdevelopment, colonization, and invasion.
ACKNOWLEDGMENTS
We are grateful to Perry Riggle, Julia Kohler, and Linc Sonenshein for careful reading of the
manuscript and for helpful comments. Our research on this project was supported by grantAI38591 from the National Institute of Allergy and Infectious Diseases.
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Annual Revie
Microbiology
Volume 59, 20
Contents
Frontispiece
Georges N. Cohen p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p xiv
Looking Back
Georges N. Cohen p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 1
Signaling in the Arbuscular Mycorrhizal Symbiosis
Maria J. Harrison p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 19
Interplay Between DNA Replication and Recombination in
Prokaryotes
Kenneth N. Kreuzer p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p43
Yersinia Outer Proteins: Role in Modulation of Host Cell Signaling
Responses and Pathogenesis
Gloria I. Viboud and James B. Bliska p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p69
Diversity and Evolution of Protein Translocation
Mechthild Pohlschrder, Enno Hartmann, Nicholas J. Hand, Kieran Dilks,
and Alex Haddad p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 91
Alternative Candida albicansLifestyles: Growth on Surfaces
Carol A. Kumamoto and Marcelo D. Vinces p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 113
Yeast Evolution and Comparative Genomics
Gianni Liti and Edward J. Louis p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 135
Biology of Bacteriocyte-Associated Endosymbionts of Plant
Sap-Sucking Insects
Paul Baumannp p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p
155
Genome Trees and the Nature of Genome Evolution
Berend Snel, Martijn A. Huynen, and Bas E. Dutilh p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 191
Cellular Functions, Mechanism of Action, and Regulation of FtsH
Protease
Koreaki Ito and Yoshinori Akiyama p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 211
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Mating in Candida albicansand the Search for a Sexual Cycle
R.J. Bennett and A.D. Johnson p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 233
Applications of Autofluorescent Proteins for In Situ Studies in
Microbial Ecology
Estibaliz Larrainzar, Fergal OGara, and John P. Morrissey p p p p p p p p p p p p p p p p p p p p p p p p p p p p 257
The Genetics of the Persistent Infection and Demyelinating Disease
Caused by Theilers VirusMichel Brahic, Jean-Franois Bureau, and Thomas Michiels p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 279
Intracellular Compartmentation in Planctomycetes
John A. Fuerst p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 299
Biogenesis of Inner Membrane Proteins in Escherichia coli
Joen Luirink, Gunnar von Heijne, Edith Houben,
and Jan-Willem de Gier p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 329
Genome-Wide Responses to DNA-Damaging Agents
Rebecca C. Fry, Thomas J. Begley, and Leona D. Samson p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 357
The Rcs Phosphorelay: A Complex Signal Transduction System
Nadim Majdalani and Susan Gottesman p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 379
Translational Regulation ofGCN4 and the General Amino Acid
Control of Yeast
Alan G. Hinnebusch p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 407
Biogenesis, Architecture, and Function of Bacterial Type IV Secretion
Systems
Peter J. Christie, Krishnamohan Atmakuri, Vidhya Krishnamoorthy,
Simon Jakubowski, and Eric Cascalesp p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p
451
Regulation of Bacterial Gene Expression by Riboswitches
Wade C. Winkler and Ronald R. Breaker p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 487
Opportunities for Genetic Investigation Afforded byAcinetobacter
baylyi, A Nutritionally Versatile Bacterial Species that is Highly
Competent for Natural Transformation
David M. Young, Donna Parke, and L. Nicholas Ornston p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 519
The Origins of New Pandemic Viruses: The Acquisition of New Host
Ranges by Canine Parvovirus and Influenza A VirusesColin R. Parrish and Yoshihiro Kawaoka p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 553
Vaccine-Derived Polioviruses and the Endgame Strategy for Global
Polio Eradication
Olen M. Kew, Roland W. Sutter, Esther M. de Gourville, Walter R. Dowdle,
and Mark A. Pallansch p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 587
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INDEXES
Subject Index p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 637
Cumulative Index of Contributing Authors, Volumes 5559 p p p p p p p p p p p p p p p p p p p p p p p p p p p 675
Cumulative Index of Chapter Titles, Volumes 5559 p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 678
ERRATA
An online log of corrections to Annual Review of Microbiology chapters
may be found at http://micro.annualreviews.org/