basic chemistry chapter 2. atoms matter all matter is made of atoms all matter is made of atomsatoms...
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Basic ChemistryBasic Chemistry
Chapter 2Chapter 2
AtomsAtomsMatterMatter All matter is made of atomsAll matter is made of atoms
AtomsAtoms Atoms consist of electrons, protons, and neutronsAtoms consist of electrons, protons, and neutrons
ElementsElements Elements are pure substances made of only one kind of atomElements are pure substances made of only one kind of atom
Chemical Chemical BondingBonding
Covalent BondsCovalent Bonds Molecules are groups of Molecules are groups of
atoms linked by covalent atoms linked by covalent bondsbonds
Hydrogen BondsHydrogen Bonds Hydrogen bonding Hydrogen bonding
occurs between polar occurs between polar moleculesmolecules
Ionic BondsIonic Bonds An ion is a charged An ion is a charged
atom or molecule. Ions atom or molecule. Ions of opposite charge may of opposite charge may form an ionic bondform an ionic bond
Water in Living ThingsWater in Living Things
Storage of WaterStorage of Water Water, which is essential for life, stores heat Water, which is essential for life, stores heat
efficiently and binds to itself and other efficiently and binds to itself and other substancessubstances
Cohesion – sticks to itselfCohesion – sticks to itself
Adhesion – different substances stick Adhesion – different substances stick togethertogether
Aqueous SolutionsAqueous SolutionsPolarityPolarity Water dissolves polar Water dissolves polar
molecules and ionic molecules and ionic compoundscompounds
Acids and BasesAcids and Bases Acids increase the Acids increase the
hydrogen ion hydrogen ion concentration of a concentration of a solution. Bases solution. Bases decrease the hydrogen decrease the hydrogen ion concentration of a ion concentration of a solution. The pH scale solution. The pH scale measures the strength measures the strength of acids and basesof acids and bases
Carbon CompoundsCarbon CompoundsCarbohydratesCarbohydrates Carbohydrates, such as glucose, are a source of Carbohydrates, such as glucose, are a source of
energy and are used as structural materials in energy and are used as structural materials in organismsorganisms
LipidsLipids Lipids are nonpolar molecules that store energy and Lipids are nonpolar molecules that store energy and
are an important part of cell membranesare an important part of cell membranesProteinsProteins Proteins are chains of amino acids. The sequence of Proteins are chains of amino acids. The sequence of
amino acids determines a protein’s shape and amino acids determines a protein’s shape and specific functionspecific function
Nucleic AcidsNucleic Acids Nucleic acids store and transmit hereditary Nucleic acids store and transmit hereditary
informationinformationATPATP ATP is the main energy currency of cellsATP is the main energy currency of cells
Molecular ChainsMolecular Chains
Carbon chains can be 1 or 2 carbon atoms Carbon chains can be 1 or 2 carbon atoms or thousands of carbon atomsor thousands of carbon atomsSmaller molecules bond together and are Smaller molecules bond together and are known as a polymerknown as a polymerMany polymers are formed by Many polymers are formed by condensation = H removed from one, OH condensation = H removed from one, OH removed from another so Hremoved from another so H22O is pulled outO is pulled out
Opposite is called HydrolysisOpposite is called Hydrolysis
CondensationCondensation
HydrolysisHydrolysis
CarbohydratesCarbohydrates
Made of Carbon, Hydrogen, and Oxygen Made of Carbon, Hydrogen, and Oxygen only in a ratio of 1:2:1only in a ratio of 1:2:1 CC66HH1212OO66, ,
Provide energyProvide energy
Monosaccharide = Monosaccharide = building blockbuilding block Called Simple Sugars Called Simple Sugars
(Glucose, Fructose)(Glucose, Fructose)
Disaccharide = 2 monosaccharidesDisaccharide = 2 monosaccharides Fructose + Glucose Fructose + Glucose → → SucroseSucrose
Polysaccharide = polymer of many Polysaccharide = polymer of many monosaccharidesmonosaccharides Starch, Glycogen, and CelluloseStarch, Glycogen, and Cellulose
LipidsLipids
Mostly Carbon and Hydrogen, small Mostly Carbon and Hydrogen, small amount of Oxygenamount of Oxygen
Nonpolar molecules so don’t dissolve in Nonpolar molecules so don’t dissolve in waterwater
Energy storage, protection, insulationEnergy storage, protection, insulation Major component of membranesMajor component of membranes
Fatty Acids Fatty Acids and Glycerol and Glycerol = building = building blockblock
If all Carbons have single bonds = If all Carbons have single bonds = saturatedsaturated Fats from animals; solids at room temp.Fats from animals; solids at room temp.
If there is a double bond = unsaturatedIf there is a double bond = unsaturated Oils from plants; Liquids are room temp. Oils from plants; Liquids are room temp.
(Healthier?)(Healthier?)
More than 1 double bond = More than 1 double bond = polyunsaturatedpolyunsaturated
ProteinsProteins
Contain Carbon, Hydrogen, Oxygen, Contain Carbon, Hydrogen, Oxygen, Nitrogen, and sometimes SulfurNitrogen, and sometimes Sulfur
Amino Acids = building blockAmino Acids = building block 20; Combine using condensation and form a 20; Combine using condensation and form a
peptide bondpeptide bond Sequence determines proteinSequence determines protein
Tissue and organ structure and cell Tissue and organ structure and cell metabolismmetabolism
Protein ExamplesProtein ExamplesHemoglobinHemoglobin Carries oxygen in your bloodCarries oxygen in your blood Made in bone marrowMade in bone marrow Contains iron; too little iron = anemicContains iron; too little iron = anemic
Protein ExamplesProtein ExamplesInsulinInsulin Hormone that regulates the amount of sugar in your Hormone that regulates the amount of sugar in your
blood; treats diabetesblood; treats diabetes Secreted by pancreasSecreted by pancreas Tells other cells to absorb glucose (no insulin = no Tells other cells to absorb glucose (no insulin = no
energy absorbed)energy absorbed)These cells (liver, muscle, and fat) then store it as glycogen These cells (liver, muscle, and fat) then store it as glycogen and stop using fat as energyand stop using fat as energyNo or low Insulin, no glucose uptake, fat used as energyNo or low Insulin, no glucose uptake, fat used as energy
Type I Diabetes – Insulin deficiency; shotsType I Diabetes – Insulin deficiency; shotsType II – Insulin resistance; other methodsType II – Insulin resistance; other methods
Special Protein = EnzymesSpecial Protein = Enzymes
Protein that changes the rate of a chemical Protein that changes the rate of a chemical reaction (may speed up)reaction (may speed up)
Many lower the Activation EnergyMany lower the Activation Energy
Activity depends on temperature, enzyme Activity depends on temperature, enzyme concentration, and pHconcentration, and pH
Specific to certain substratesSpecific to certain substrates
Works like a lock and keyWorks like a lock and key
Amino acids make proteins (enzyme) folded in a Amino acids make proteins (enzyme) folded in a certain way which determines jobcertain way which determines job
Energy for Life ProcessesEnergy for Life ProcessesEnergy in Chemical ReactionsEnergy in Chemical Reactions Chemical Reactions absorb or release energyChemical Reactions absorb or release energy
Activation EnergyActivation Energy Starting a chemical reaction requires activation energyStarting a chemical reaction requires activation energy
Enzyme-Substrate ComplexEnzyme-Substrate Complex
Nucleic AcidsNucleic Acids
Stores cellular information in the form of a Stores cellular information in the form of a codecode DNA and RNADNA and RNA
Nucleotides = building blocksNucleotides = building blocks Carbon, Hydrogen, Nitrogen, and Carbon, Hydrogen, Nitrogen, and
Phosphorous in 3 partsPhosphorous in 3 partsNitrogenous BaseNitrogenous Base
Simple SugarSimple Sugar
Phosphate GroupPhosphate Group
How to IdentifyHow to IdentifyProteins turn a blue Biuret solution to pink-Proteins turn a blue Biuret solution to pink-purplepurple
Starches (carbohydrates) show up Starches (carbohydrates) show up bluish/black when drops of iodine are bluish/black when drops of iodine are addedadded
Sugars (carbohydrates) turn a blue Sugars (carbohydrates) turn a blue Benedict’s solution an orange-brownBenedict’s solution an orange-brown
Lipids leave a grease spot on brown paperLipids leave a grease spot on brown paper