biob111 - tutorial activities for session 7 i. tutorial ... · biob111 - tutorial activities for...
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BIOB111 - Tutorial activities for session 7
I. Tutorial Organic Chemistry
II. Vitamin C Experiment General topics for the week 4 Session 7
Structure of organic compounds
Students are given the molecular models to explore and learn about organic compounds
Useful links:
Log on to the following site and learn about organic chemistry
https://www.youtube.com/watch?v=nMTQKBn2Iss
General tutorial questions:
1. Which of the following statements concerning organic compounds is correct?
a) Organic compounds are found only in non-living systems
b) Organic compounds are always soluble in water
c) Organic compounds cannot be found in nature; they must be synthesized in the
laboratory
d) Organic compounds always contain the element carbon
2. The distinction between a saturated hydrocarbon and an unsaturated hydrocarbon
relates to:
a) Boiling points
b) Volatility
c) Number of carbon atoms present
d) The number of carbon to carbon bonds present
Conceptual multiple choice questions: 3. Concept: Organic compounds
Context: Organic compounds are wide spread in nature. In fact important compounds for
our health like carbohydrates, lipids and proteins are all classed as organic compounds.
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Question: Which of the following is correct for organic compounds?
a) Organic compounds can only be derived in the laboratory
b) An organic compound will always contain at least one carbon atom
c) Organic compounds can only be derived in nature
d) An organic compound may or may not contain carbon atoms
4. Concept: Organic vs inorganic compounds
Context: There are two broad classes of compounds, organic and inorganic. Organic
compounds are much more numerous, making up about 85% of all compounds. Inorganic
compounds are much fewer, making up 15% of all compounds.
Question: Which of the following provides the best explanation to why organic compounds
are more numerous than inorganic compounds?
a) All organic compounds contain carbons, with each carbon forming four separate
covalent bonds, meaning there is great diversity in the possible combinations of
atoms to create different compounds
b) Organic compounds are made up of metal and non-metal atoms, whereas organic
compounds are made up of only metal atoms
c) All inorganic compounds contain carbons, with each carbon forming four separate
covalent bonds, meaning there is great diversity in the possible combinations of
atoms to make different compounds
d) Organic compounds are made up of non-metal atoms, whereas organic compounds
are made up of only metal atoms
5. Concept: Individual atoms vs atoms within a compound
Context: Multiple atoms come together to form compounds. Within a compound there are
multiple atoms are attached to each other via chemical bonds. For example, to form a H2O
molecule, an oxygen atom forms a covalent bonds to two separate hydrogen atoms.
Question: Are the oxygen and hydrogen atoms more stable within the H2O compound or
as separate atoms and why?
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a) The atoms are more stable as individual atoms, as all of their electrons are paired,
whereas as within compounds the atom are more reactive as some of the electrons
are unpaired
b) The atoms are equally stable when in the compounds and as individual atoms
c) The atoms are more stable within the compound, as all of their electrons are paired,
whereas as within the individual atoms some of the electrons are unpaired and
reactive
d) The atoms are more stable as individual atoms as they can move about more freely
than when they are a part of a compound
6. Concept: Covalent bonding of a carbon atom
Context: The outer shell of a carbon atom contains four unpaired valence electrons. The
number of unpaired valence electrons an atom contains is equal to the number of covalent
bonds the atom is capable of forming.
Question: Which of the following accurately describes the covalent bonding of a carbon
atom?
a) Each of the four unpaired valence electrons must form a covalent bond with another
carbon atom to become more stable
b) Each of the four unpaired valence electrons within the carbon atom can covalent
bond to each other to become more stable
c) Each of the four unpaired valence electrons of a carbon atom can form a covalent
bond via electron sharing with other atoms such as hydrogen and carbon
d) Each of the four unpaired valence electrons of a carbon atom can covalent bond to
more than one different atom simultaneously
7. Concept: Saturated vs unsaturated hydrocarbons
Context: Compounds composed of carbon and hydrogen are referred to as hydrocarbons.
Hydrocarbon derivatives can also have additional atoms such as nitrogen and oxygen.
Hydrocarbons are grouped into those that are saturated and those that are unsaturated.
Question: Which of the following best describes the difference between a saturated and an
unsaturated hydrocarbon?
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a) The carbons within saturated hydrocarbons are connected to other carbons by
single bonds, whereas at least one carbon in an unsaturated hydrocarbon connects
to another carbon atom through a double or triple bond
b) Saturated hydrocarbons contain only single carbon-carbon bonds, whereas
unsaturated hydrocarbons contain only double or triple carbon-carbon bonds
c) The carbons within unsaturated hydrocarbons are connected to other carbons by
single bonds, whereas at least one carbon in an saturated hydrocarbon connects to
another carbon atom through a double or triple bond
d) Unsaturated hydrocarbons contain only single carbon-carbon bonds, whereas
saturated hydrocarbons contain only double or triple carbon-carbon bonds
8. Concept: Straight chain vs ring structured hydrocarbons
Context: Hydrocarbons that contain only carbon and hydrogen atoms can adopt either
straight chain-like structures or ring-like structures. For example, a six carbon containing
hydrocarbon can exist in both the straight chain or ring form (below).
Question: Which of the following correctly describes the major difference between the
straight chain (acyclic) and ring structured (cyclic) hydrocarbons?
a) Cyclic hydrocarbons have carbons at the end of the structure that bond to only one
other carbon atom, whereas all of the carbons in an acyclic structure bond to two
other carbon atoms
b) All of the carbons in a cyclic hydrocarbon are connected to only one other carbon
atom, whereas all of the carbons in an acyclic structure connect to two carbon atoms
c) Acyclic hydrocarbons have carbons at the end of the structure that bond to only one
other carbon atom, whereas all of the carbons in a cyclic structure bond to two other
carbon atoms
d) All of the carbons in an acyclic hydrocarbon are connected to only one other carbon
atom, whereas all of the carbons in an acyclic structure connect to two carbon atoms
9. Concept: Straight chain vs ring structured hydrocarbons
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Context: Both straight chain (acyclic) and ring structured (cyclic) hydrocarbons can form
structures that contain the same number of carbon atoms. However, these acyclic and
cyclic compounds contain different numbers of hydrogen atoms, even though they have
the same number of carbon atoms.
Question: Which of the following best describes why acyclic and cyclic versions of
hydrocarbons contain different numbers of hydrogen atoms?
a) Acylcic hydrocarbons have more hydrogen atoms than cyclic hydrocarbons, as
acyclic hydrocarbons have defined end carbons which attach to three hydrogen
atoms
b) Cyclic hydrocarbons have carbons that always attach to two other carbons,
meaning they have more hydrogen atoms in total than acyclic hydrocarbons
c) Cyclic hydrocarbons have more hydrogen atoms than acyclic hydrocarbons, as
cyclic hydrocarbons have defined end carbons which attach to three hydrogen
atoms
d) Acyclic hydrocarbons have carbons that always attach to two other carbons,
meaning they have more hydrogen atoms in total than cyclic hydrocarbons
10. Concept: Properties of a functional group
Context: A functional group is a characteristic set of atoms used to distinguish one set of
atoms from another. For example, the thiol functional group is R-SH (R = connection to
other atoms). There are a variety of functional groups that compounds may contain such
as the ester, amide and aldehyde.
Question: Once you’ve identified that a compound contains a certain functional group,
what do you now know about the compound?
a) The compound will only react with other compounds that contain the same functional
group
b) The compound is stable and unreactive, so it won’t participate in chemical reactions
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c) The compound will react similarly to other compounds with the same functional
group
d) The compound will have a specific function that is the same as all other compounds
that contain the same functional group
11. Concept: Number of functional groups in a compound
Context: Compounds can be divided into different groups based on the functional groups
that they contain. For example, each amino acid (many of which connect to make up
proteins) contains a carboxylic acid and amide functional group.
Question: Which of the following is true about the number of functional groups a
compound can contain?
a) Each compound only contains one functional group
b) A compound may either contain many or very few functional groups
c) Each compound only contains two functional groups
d) Compounds may either contain one or two functional groups
12. Concept: Stereoisomers
Context: There are two distinct classes of isomers, structural isomers and stereoisomers.
Two compounds that are structural isomers have the same type and number of atoms but
have different bonding arrangements, which gives the compounds a different shape. In
contrast, two compounds that are stereoisomers have the same type and number of
atoms with the same bonding arrangements. However, stereoisomers have differences in
the spatial arrangement of their atoms.
Question: Which of the following best describes stereoisomers?
a) H2O and CO2 are stereoisomers as they have different shapes due to the different
atoms and bonding arrangements present
b) 2-metylpropane and butane are structural isomers that have different shapes due to
the different bonding arrangements within the four carbon and 10 hydrogen atoms
present in each
c) cis-butane and trans-butane are stereoisomers that have different arrangements in
space but have the same bonding arrangements
d) Compounds that have similar spatial arrangements are classed as stereoisomers
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Vitamin C Experiment
Determination of Vitamin C Concentration
Introduction
Vitamin C is a water-soluble compound that is essential for life. It is involved in many processes
in the human body, including: the production of collagen in the connective tissue; the synthesis of
dopamine, noradrenaline and adrenaline in the nervous system; and the synthesis of carnitine,
which is important in the transfer of energy to the cell mitochondria. A deficiency in vitamin C
causes scurvy, a disease that affected sailors in the 16th - 18th centuries. It was discovered that
fresh fruit, e.g. limes and oranges, or sauerkraut (preserved cabbage) provided the sailors with
protection from scurvy. In Australia and New Zealand, the recommended daily intake (RDI) of
Vitamin C is 60 mg. Vitamin C is often used as an antimicrobial and antioxidant in foodstuffs.
Vitamin C is the L-enantiomer of ascorbic acid, as shown in Figure 1. Ascorbic acid is a stable
solid that does not react with air, however, it is rapidly oxidised on exposure to air and light when
in aqueous solution. The product of this oxidation is dehydroascorbic acid, as shown in Figure 2.
Figure 1: The two enantiomers of ascorbic acid.
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Figure 2: The oxidation of ascorbic acid to dehydroascorbic acid.
DESCRIPTION
This method determines the vitamin C concentration in a solution using a redox reaction. In the
redox reaction, iodine oxidises the ascorbic acid to dehydroascorbic acid, as the iodine is reduced
to iodide ions (below).
In the above reaction the iodine is reduced to iodide by vitamin C (ascorbic acid), which is itself
oxidised. Only when all of the ascorbic acid has been oxidised is iodine free to react with the starch
indicator to form the starch-iodine complex. The starch-iodine complex is blue/black in colour and
causes a drastic colour change in the solution. The point at which the starch-iodine complex is
formed is dependent on the amount of vitamin C in the solution, with solutions containing more
vitamin C requiring more iodine to be added before the blue/black colour change. The method is
suitable for determining the Vitamin C content in tablets, fresh or packaged fruit juices and solid
fruits and vegetables.
GOALS FOR THE EXPERIMENT.
Observe the colour change as the redox reaction proceeds
Estimate the vitamin C concentration of each sample by counting the number of drops of iodine
solution needed to create the blue-black starch-iodide complex
Present data in the format of table for each vitamin C source sample (fresh or preserve)
Materials
1. 20-mL pipette
2. 250-mL conical flasks
3. 10-mL and 100-mL measuring cylinders
4. 10-mL syringe
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5. Orange juice samples, dissolved tablet of vitamin C
6. Starch indicator
7. Iodine solution
Safety Precautions
• Always wear safety goggles and a lab apron
• Report any spills to your teacher
• Do not taste, eat, or drink any materials used in the lab
• Wash your hands after the experiments
Pre-Lab
1. What do you expect to observe when the chemical reaction between ascorbic acid and
iodine begins?
20-mL pipette
Measuring Cylinder Juice samples
Conical flask
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2. Why do we need the starch indicator in the experiment, even though it is not part of the
redox reaction?
Procedure
1. Pipette 20 ml of orange juice sample to a 250 ml conical flask
2. Add two drops of starch indicator
3. Add iodine solution to a syringe and start to add the iodine solution to the orange juice
solution one drop at a time (counting each drop)
4. Count the number of drops added until the colour of orange juice sample turns dark blue
and then record the number of drops required in the table below
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Data Table: Fill out the table for different samples.
Sample name Number of drops of iodine
needed to turn the solution blue
Conclude and Apply
1. Why does the orange juice change colour during the experiment? Does the orange juice
contain vitamin C?
2. Why does the number of drops of iodine solution required to change the colour of the
sample solution to a blue/blue black colour differ between the different samples?