biowire progress report week four orr ashenberg, patrick bradley, connie cheng, kang-xing jin, danny...

12
BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang- Xing Jin, Danny Popper, Sasha Rush

Upload: brenda-benson

Post on 23-Dec-2015

217 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush

BioWire Progress ReportWeek Four

Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush

Page 2: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush

Photolithography Process

Design a CAD image of the shapes we want to make.

Page 3: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush

Our Mask

Page 4: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush

Our Mask with labels

Page 5: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush

Photolithography Process

Design a CAD image of the shapes we want to make.

Dr. Lu makes the CAD into a mask.– He estimates 30 minutes ($50)

Page 6: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush

Photolithography Process

Design a CAD image of the shapes we want to make.

Dr. Lu makes the CAD into a mask.– He estimates 30 minutes ($50)

Someone from Kit’s lab makes the mask into a positive master mold in the cleanroom.

Page 7: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush
Page 8: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush

Photolithography Process

Make a negative PDMS from the master. Make positive agar stamps from the PDMS negative. Pour cell culture onto stamp and let sit for 24 hours. (Optional) Stamp down a perimeter of cells around

the stamping area and grow for 24 hours. Stamp the cells onto the agar plate.

Page 9: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush
Page 10: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush

Progress

Design has been approved by Dr. Lu. High gel strength agar will arrive later today.

Find someone from Kit’s lab to make the master.

Get an XY motor for visualization. Get an XYZ motor for possible use in precise

stamping for the 50m stamp (150m depth).

Page 11: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush

Future Designs

Different feature sizes. Once line signaling works, move to shapes. Possibility of controlling cell density by

making lines out of small checkerboards.

Page 12: BioWire Progress Report Week Four Orr Ashenberg, Patrick Bradley, Connie Cheng, Kang-Xing Jin, Danny Popper, Sasha Rush

Updated Schedule

Week 1 (6/6): Project Choice and Design Week 2 (6/13): Got parts and set up tests Week 3 (6/20): Began building test constructs, finished sender Week 4 (6/27): Parts building continues; Experiments with aTc sender;

completed CAD design. Week 5 (7/4): More parts building; Pour stamps and test stamping Week 6 (7/11): Test cell signaling density Week 7 (7/18): Construct IFFL Week 8 (7/25): Test it Week 9 (8/1): “ Week 10 (8/8): “ Week 11 (8/15): “ Week 12 (8/22): “