characterization and clustering analysis - acd/labs · 2014-06-20 · michael boruta industrial...

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Characterization and Clustering Analysis Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager

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Page 1: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Characterization and Clustering Analysis

Michael BorutaIndustrial Solutions Manager

Optical Spectroscopy Product Manager

Page 2: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Outline

• Background

• Algorithm

• Analysis & Review

• Examples

Page 3: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Background

• The most common use of cluster analysis is classification.

• Several assumptions– No prior judgments used to organize the data (un-supervised

clustering)

– Each member belongs to one and only one group

• Several questions– What will be used to measure the similarity

– How are classes formed & defined

– What inferences can be drawn regarding their significance

Page 4: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

???

Page 5: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Euclidean Distance

Total area = 369

Total area = 927

HQI = 54.4

Page 6: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

1st Derivative Euclidean Distance

Total area = 7.46

Total area = 6.83HQI = 97.96

Page 7: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Gap Analysis

Gap= 4.3; Gap % = 11.5

Gap= 11.8; Gap % = 31.1

Gap= 3.4; Gap % = 9.0

CH3

CH3

CH3

CH3

CH3

PVA sample

Page 8: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Example 1: XRPD Polymorphs

Page 9: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Example 1: XRPD Polymorphs

Page 10: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Data Review

Spectral Overlays

Graph

Overlay Legend

Nearest Neighbors Table

DSC curve

TGA curve

Image

Page 11: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Analysis/Review

Page 12: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Example 2: C-13 NMR Polymers

Page 13: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Example 3: IR Polymers

Page 14: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Example 3: IR Polymers

Page 15: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Example 3: IR Polymers

Page 16: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Example 4: IR Oils

All spectra

Page 17: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Example 4: IR Oils

Groups 1 and 2

Page 18: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Example 4: IR Oils

Page 19: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •

Summary

• Clustering available for several spectroscopy types; IR, Raman, C13, H1, & XRPD

• Clustering assumes each member can be in only one cluster

• Data analysis/review can merge or split clusters, or move members from one cluster to another

• Clustering can be used for many types of classification problems;

– Comparing competitive products

– Salts and polymorphs

– Classifying polymer types

– Chemical imaging analysis

• Once classifications exist, new samples can be compared to existing clusters

Page 20: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •
Page 21: Characterization and Clustering Analysis - ACD/Labs · 2014-06-20 · Michael Boruta Industrial Solutions Manager Optical Spectroscopy Product Manager. Outline • Background •