chatila-bry sample
DESCRIPTION
Chatila-Bry Sample. August 15, 2012 Hao Zheng , Petrosino Lab [email protected] Molecular Virology & Microbiology Baylor College of Medicine. Analysis Specifics. Mothur , CloVR , in-house scripts 19 samples Normalization to 3,507 reads/sample. Alpha Diversity-Rarefaction Curves. - PowerPoint PPT PresentationTRANSCRIPT
![Page 1: Chatila-Bry Sample](https://reader030.vdocuments.net/reader030/viewer/2022012908/56815265550346895dc09954/html5/thumbnails/1.jpg)
Chatila-Bry Sample
August 15, 2012Hao Zheng, Petrosino Lab
[email protected] Molecular Virology & Microbiology
Baylor College of Medicine
![Page 2: Chatila-Bry Sample](https://reader030.vdocuments.net/reader030/viewer/2022012908/56815265550346895dc09954/html5/thumbnails/2.jpg)
Analysis Specifics
• Mothur, CloVR, in-house scripts• 19 samples• Normalization to 3,507 reads/sample
![Page 3: Chatila-Bry Sample](https://reader030.vdocuments.net/reader030/viewer/2022012908/56815265550346895dc09954/html5/thumbnails/3.jpg)
Alpha Diversity-Rarefaction Curves
![Page 4: Chatila-Bry Sample](https://reader030.vdocuments.net/reader030/viewer/2022012908/56815265550346895dc09954/html5/thumbnails/4.jpg)
Beta Diversity-PCoA Plots
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Mean Relative Abundance of Phyla
![Page 6: Chatila-Bry Sample](https://reader030.vdocuments.net/reader030/viewer/2022012908/56815265550346895dc09954/html5/thumbnails/6.jpg)
Mean Relative Abundance of Phyla
![Page 7: Chatila-Bry Sample](https://reader030.vdocuments.net/reader030/viewer/2022012908/56815265550346895dc09954/html5/thumbnails/7.jpg)
Mean Relative Abundance of Class
![Page 8: Chatila-Bry Sample](https://reader030.vdocuments.net/reader030/viewer/2022012908/56815265550346895dc09954/html5/thumbnails/8.jpg)
Mean Relative Abundance of Class
![Page 9: Chatila-Bry Sample](https://reader030.vdocuments.net/reader030/viewer/2022012908/56815265550346895dc09954/html5/thumbnails/9.jpg)
Mean Relative Abundance of Genus
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Mean Relative Abundance of Genus
![Page 11: Chatila-Bry Sample](https://reader030.vdocuments.net/reader030/viewer/2022012908/56815265550346895dc09954/html5/thumbnails/11.jpg)
Taxonomy-based sample clustering
![Page 12: Chatila-Bry Sample](https://reader030.vdocuments.net/reader030/viewer/2022012908/56815265550346895dc09954/html5/thumbnails/12.jpg)
Analysis Result Path
/stornext/snfs3/cmmr/Share/ChatilaBry/Processing