clarice j. coyne, rebecca j. mcgee, d. scott mattinson, sam fuchs, john fellman

15
Genetic diversity of Pisum sativum wrinkled seed collection for seed sugar composition and concentration Clarice J. Coyne, Rebecca J. McGee, D. Scott Mattinson, Sam Fuchs, John Fellman

Upload: carl

Post on 24-Feb-2016

46 views

Category:

Documents


0 download

DESCRIPTION

Genetic diversity of Pisum sativum wrinkled seed collection for seed sugar composition and concentration . Clarice J. Coyne, Rebecca J. McGee, D. Scott Mattinson, Sam Fuchs, John Fellman. Objective. Genetic diversity of oligosaccharides in USDA pea germplasm - PowerPoint PPT Presentation

TRANSCRIPT

Page 1: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

Genetic diversity of Pisum sativum wrinkled seed

collection for seed sugar composition and

concentration

Clarice J. Coyne, Rebecca J. McGee, D. Scott Mattinson, Sam Fuchs, John

Fellman

Page 2: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

Objective Genetic diversity of oligosaccharides in

USDA pea germplasm› Set I: wrinkled green pea germplasm› Harvested at green processing stage

Identify diversity for breeders› Soybean (Dierking & Bilyeu 2008)

Page 3: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

Pea carbohydrates significance

Pea : inexpensive source of protein, carbohydrate, vitamins and minerals.

Probiotic: summary by Ekvall et al. 2006 Food Chemistry 94: 513–519.

Antinutritional factors Frost tolerance Desiccation protection Carbohydrate transport in the phloem

Page 4: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

Introduction to pea LMWC Low molecular weight carbohydrates in

pea seed include:› Sucrose› Fructose› Glucose› Sorbitol› Raffinose› Stachyose› Verbascose

Page 5: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

MATERIALS AND M

ETHODS I

Wrinkled pea from the USDA pea core collection and from the VIR collection

Six plants per accession grown in potting mix under greenhouse conditions

Experiment IHarvested at the green pea stage (estimated maturity as no tenderometer available)

Experiment IIHarvest green pea stage using same days after flowering for all accessions (in progress)

Page 6: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

MATERIALS AND M

ETHODS II

Green pods were harvested and stored at -20 C until prepared for gas chromotography analysis

TechnicianSam Fuchs

Page 7: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

SAMPLING THE ACCESSIONS

Pea seed removed from pod

Uniform seed selectedNote: Ekvall et al 2003

Three subsamples of 1 gram each of uniform color and size pea

Samples ground with a Terex Grinder

Page 8: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

ETHANOL EXTRACTION

Page 9: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

Samples dried down

Page 10: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

CARBOHYDRATES DERIVATIZED

Seed extracts were taken to dryness under reducedpressure.

Derivatized with a mixture of trimethylsilyl imidazole:pyridine(1:1, v/v).

Page 11: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

GAS CHROMOTOGRAPHY

Soluble carbohydrates were converted into trimethylsilylderivatives and separated by capillary gas chromatography as described previously (Peterbauer et al .1998).

For quantification, ratios of peak areas to that of the internal standard (phenyl b-D-glucopyranoside) were compared with those of external standards (Sigma).

Page 12: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

Results from Experiment I

#574510-USA

#411143-New Zealand

#356974-India

#413684-Hungary

#164971-Turkey

#244150-Netherlands

0.1

1

10

100

1000

10000

Fructose Glucose Sorbitol B-pheyl-Gluco. Sucrose Raffinose Stachyose Verbascose

USDA World Pea Gerplasm Analysis of CarbohydratesC

arbo

hydr

ate,

ug/

g (F

W),

Log 10

Page 13: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

Summary Germplasm rich source of diversity in

low molecular weight carbohydrates Methods yield high quality data with on

low standard errors Experiment II: use DAP for uniform

maturity (100 accessions) Experiment III: dry pea accessions

Page 14: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

Many thanks USDA Pisum CGC Evaluation funding Greenhouse helpers Landon Charlo,

Alison Hitchcock, Nancy Nydegger-Paulitz

Collaborators Rebecca J. McGee, D. Scott Mattinson, Sam Fuchs, and….

Page 15: Clarice J.  Coyne,  Rebecca J.  McGee,  D. Scott  Mattinson,  Sam  Fuchs,  John  Fellman

Post-harvest chemist:Professor John Fellman