coarse-to-fine image reconstruction rebecca willett in collaboration with robert nowak and rui...

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Coarse-to-Fine Coarse-to-Fine Image Reconstruction Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

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Page 1: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Coarse-to-FineCoarse-to-FineImage ReconstructionImage Reconstruction

Rebecca Willett

In collaboration with

Robert Nowak and Rui Castro

Page 2: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Haar Tree PruningMSE = 0.0033

Poisson Data~14 photons/pixelMSE = 0.0169

Wedgelet Tree Pruning

MSE = 0.0015

O(n)

O(n11/6)

Page 3: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Iterative reconstructionIterative reconstruction

QuickTime™ and aTIFF (Uncompressed) decompressor

are needed to see this picture.

E-Step: Compute conditionalexpectation of new noisy

image estimate given data and current image estimate

Traditional Shepp-Vardi M-Step: Maximum

Likelihood Estimation

Improved M-Step:Complexity Regularized

Multiscale Poisson Denoising

(Willett & Nowak, IEEE-TMI ‘03)

Page 4: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

MLE

Jeff Fessler’s PWLS Wedgelet-basedreconstruction

Shepp-Logan

Wedgelet-based tomographyWedgelet-based tomography

Page 5: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

TomographyTomography

Page 6: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

piecewise constant 2-d function with “smooth” edges

A simple image modelA simple image model

Page 7: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Access only to n noisy “pixels”

Measurement modelMeasurement model

Goal: find an estimate of the original image such that

is small.

Page 8: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Image spaceImage space

Page 9: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Kolmogorov metric entropyKolmogorov metric entropy

Page 10: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Dudley ‘74Dudley ‘74

Page 11: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

approx. err estimation err.

Minimax lower bound

Korostelev & Tsybakov, ‘93

Page 12: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Adaptively pruned partitionsAdaptively pruned partitions

Page 13: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Tree pruning estimationTree pruning estimation

Page 14: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Partitions and EstimatorsPartitions and Estimators

Sum-of-squared errors empirical risk:

Page 15: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Complexity penalized estimator:

Complexity Regularization and Complexity Regularization and the Bias-Variance Trade-offthe Bias-Variance Trade-off

set of all possible tree prunings

|P|

fidelity to data

complexity

Page 16: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

The Li-Barron boundThe Li-Barron bound

approximation error(bias)

estimation error(variance)

Li & Barron, ‘00Nowak & Kolaczyk, ‘01

Page 17: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

The Kraft inequalityThe Kraft inequality

1

1110

1 1 1 1 1000 00 0 0

0000 00000000 0000 0000

Page 18: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Decorate each partition set with a constant:

squared approximation error

This class of models is not well-matched to the class of images

Estimating smooth contours - HaarEstimating smooth contours - Haar

Page 19: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Donoho ‘99

Approximating smooth contours - wedgeletsApproximating smooth contours - wedgelets

Page 20: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Approximating smoother contoursApproximating smoother contours

Original Image Haar Wavelet Partition Wedgelet Partition

WedgeletWedgelet

> 850 terms> 850 terms < 370 terms< 370 terms

(Donoho ‘99)(Donoho ‘99)

Page 21: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

squared approximation error

Use wedges and decorate each partition set with a constant:

This is the best achievable rate!!!

Estimating smoother contours - wedgelets

Page 22: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Simple ComputationPoor approximation

Haar-based estimation Wedgelet estimation

Complex ComputationGood approximation

The problem with estimating smooth contoursThe problem with estimating smooth contours

Page 23: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Computational implicationsComputational implications

Page 24: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

space of all signal models is very large from which one is selected

A solution:A solution:Coarse-to-fine model selectionCoarse-to-fine model selection

two-step process involves search first over coarse model space

coarse model space

Page 25: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

second step involves search over small subset of models

Coarse-to-fine model selectionCoarse-to-fine model selection

Page 26: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Start with a uniform partition

C2F wedgelets: two-stage optimizationC2F wedgelets: two-stage optimization

Stage 1: Adapt partition to the data by pruning

Stage 2: Only apply wedges in the small boxes that remain

Page 27: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

C2F wedgelets: two-stage optimizationC2F wedgelets: two-stage optimization

Page 28: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Error analysis of two-stage approach:Error analysis of two-stage approach:

(Castro, Willett, Nowak, ICASSP ‘04)

Page 29: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Controlling variance in the preview stageControlling variance in the preview stage

Start with a coarse partition in the first stage:• lowers the variance of the coarse resolution estimate• with high probability, pruned coarse partition close

to optimal coarse partition• unpruned boxes at this stage indicate edges or boundaries

Page 30: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Controlling bias in the preview stageControlling bias in the preview stage

Bias becomes large if a square containing a boundary fragment is pruned in the first stage (this may happen if a boundary is close to the side of the squares)

Solution:• Compute TWO coarse

partitions - one normal, and one shifted

• Refine any region unpruned in either or both shifts

potential problem area:

not a problem after shift:

Page 31: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Computational implicationsComputational implications

Page 32: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

noisy dataMSE = 0.0052

stage 1 result MSE = 0.1214

stage 2 result O(n7/6), MSE = 0.00046

Main result in actionMain result in action

Compare with standardwedgelet denoising :

Significant computational savings and better result !

O(n11/6), MSE = 0.00073

Page 33: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

low resolution

high resolution

C2F limitations: The “ribbon”C2F limitations: The “ribbon”

Page 34: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

C2F and other greedy methods:C2F and other greedy methods:

Matching pursuit

20 Questions (Geman & Blanchard, ‘03)

Boosting

Page 35: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

More general image modelsMore general image models

platelet planar fits

(Willett & Nowak, IEEE-TMI ‘03, Willett & Nowak, Wavelets X. Nowak, Mitra, & Willett, JSAC ‘03)

Page 36: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Platelet Approximation TheoryPlatelet Approximation Theory

m-term approximation error decay rate:

• Fourier: O(m-1/2)• Wavelets: O(m-1)• Wedgelets: O(m-1)• Platelets: O(m-2)• Curvelets: O(m-2)

Twice continuously differentiable

Twice continuously differentiable

Page 37: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Confocal microscopy simulationConfocal microscopy simulation

Noisy Image

Haar Estimate

Platelet Estimate

Page 38: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

C2F limitations: complex imagesC2F limitations: complex images• “Images are edges”: many images consist

almost entirely of edges

• C2F model still appropriate for many applications:– nuclear medicine– feature classification– temperature field estimation

Page 39: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

C2F in multiple dimensionsC2F in multiple dimensions

Page 40: Coarse-to-Fine Image Reconstruction Rebecca Willett In collaboration with Robert Nowak and Rui Castro

Final remarks and ongoing workFinal remarks and ongoing work

• Careful greedy methods can perform as well as exhaustive searches, both in theory and practice

• Coarse-to-fine estimation dramatically reduces computational complexities

• Similar ideas can be used in other scenarios– Reduce the amount of data required (e.g., active learning

and adaptive sampling)– Reduce number of bits required to encode model locations

in compression schemes