converting dart hapmap to hapmap acceptable by...
TRANSCRIPT
ConvertingDartHapmaptoHapmapacceptablebyTassel1. Openyourfileinexcelanfocustothebelowcolumns
2. Inthe#rscolumnfillitwithmarkerIDensurethattheyuniquenumbersseebelow
3. Fillinthechromosomeandpositioninformationasasbelow
4. Forthechromosomeandpositionsthosethataremissingputdummypositions
seebelow
putdummypositionsasbelow
5. Removeallothercolumnsbeforethe#rs
6. Removethefirstsixrowsthathavemostlyasteri7.
8. Ensurethatyoursamplenamesdonothavespacesbetweenthecharactersyou
canfindareplacetoremoveforspaces.
9. Saveyourfileastxtformat
10. Importthedatatotasselyouwillgetthebelowerror
11. TosortitgotothetasselmenuandselectData–sortgenotypefile(selectyourfileandanoutputfile)seebelow.