copyright © 2001 college of american pathologists sample hierarchy for tularemia disorder zoonotic...

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Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Sample Hierarchy for Tularemia Disorder Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia Cryptogeni c tularemia Generalized tularemia Tularemia About SNOMED Relationships Typhoida l tularemi a Pulmonary tularemia

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Page 1: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

Sample Hierarchy for Tularemia DisorderSample Hierarchy for Tularemia Disorder

Zoonotic bacterial disease

Enteric tularemia

Glandular tularemiaCryptogenic

tularemia

Generalized tularemia

TularemiaAbout SNOMED

Relationships

Typhoidal tularemia

Pulmonary tularemia

Page 2: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

Relationships for TularemiaRelationships for Tularemia

(23002003)Zoonoticbacterialdisease

(51526001)Francisellatularensis

(19265001)Tularemia

Descriptions

Is a

Has causativeagent

Page 3: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

Relationships for Pulmonary Relationships for Pulmonary TularemiaTularemia

(19265001)Tularemia

(51526001)Francisellatularensis

(39607008)Lung

structure

(45556008)Pulmonarytularemia

Descriptions

(53084003)Bacterial

pneumonia

(23583003)Inflammation

Associatedmorphology

Is a Is a

Hasfinding site

Has causativeagent

Page 4: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

Subclass Gram-Negative Aerobic Rods

Hierarchy for Francisella Tularensis Hierarchy for Francisella Tularensis (Organism)(Organism)

Francisella tularensis(Living organism)

Francisella

Gram-negative bacterium

Gram-negative coccobacillus

Class Scotobacteria

Page 5: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

Concept Inter-relationships for Concept Inter-relationships for Disorders Disorders

• SNOMED CT uses relationships between concepts to provide logical, computer readable definitions of medical concepts. These relationships, which can be hierarchical or non-hierarchical, enable health data to be re-used for decision support, outcomes analysis and clinical research. Follow this link to see the relationship types applicable to finding and disorders.

Page 6: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

Relationship Types for DisordersRelationship Types for Disorders

Clinical Attributes

• Finding Site

• Causative Agent

• Associated Morphology

• Laterality

Hierarchical

• Is a

Page 7: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

The “Is a” RelationshipThe “Is a” Relationship

• The “Is a” relationship is used to create a hierarchical relationships between concepts, relating specific concepts to a more general category. For example:

“Pulmonary tularemia” “Is a” (kind of) “Tularemia”

Page 8: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

The “Finding site” RelationshipThe “Finding site” Relationship

• The “Finding site” relationship identifies the part of the body affected by the specific disorder or finding. For example:

“Pulmonary tularemia” (has) “Finding site” “Lung structure”

Page 9: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

The “Causative agent” RelationshipThe “Causative agent” Relationship

• The “Causative agent” relationship identifies the direct cause of the disorder or finding. The causative agent is the bacterium, virus, toxin or environmental agent that causes the disorder. For example:

“Tularemia” (has) “Causative agent” “Francissella tularensis”

Page 10: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

The “Associated morphology” The “Associated morphology” RelationshipRelationship

• The “Associated morphology” relationship identifies the abnormal physical condition that is characteristic of a given disorder or finding. For example:

“Pneumonia” (has) “Associated morphology” “Inflammation”

Page 11: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

The “Laterality” RelationshipThe “Laterality” Relationship

• The laterality relationship specifies the side of the body that applies to an anatomy concept.  Procedures, findings and disorders can have laterality by qualifying their site (procedure-site or finding-site). For example:

“Left kidney” (has) “Laterality” “Left”

“Cyst of left kidney” (has) “Finding site” “Left Kidney”

“Biopsy of left kidney” (has) “Procedure site” “Left Kidney”

Page 12: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

Descriptions for TularemiaDescriptions for Tularemia

Term Description TypeTularemia (disorder) Fully specified nameTularemia Preferred TermDeer fly fever SynonymInfection byFrancisella tularensis

Synonym

Ohara's disease SynonymPahvant Valley fever SynonymPahvant Valleyplague

Synonym

Rabbit fever SynonymYatobyo Synonym

Page 13: Copyright © 2001 College of American Pathologists Sample Hierarchy for Tularemia Disorder Zoonotic bacterial disease Enteric tularemia Glandular tularemia

Copyright © 2001 College of American Pathologists

Descriptions for Pulmonary TularemiaDescriptions for Pulmonary Tularemia

Term Description TypePulmonary tularemia(disorder)

Fully specified name

Pulmonary tularemia Preferred TermBronchopneumonictularaemia

Synonym

Bronchopneumonictularemia

Synonym