coupled ocean-sediment model recom/medusa · medusa = layered sediment model a 1-dimensional...

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Coupled ocean-sediment model REcoM/MEDUSA Ying Ye, Guy Munhoven, Christoph Völker„ Martin Butzin, Peter Köhler Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research 17 December 2019, Bremen 1 / 15

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Page 1: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

Coupled ocean-sediment model REcoM/MEDUSA

Ying Ye, Guy Munhoven, Christoph Völker„ Martin Butzin, Peter Köhler

Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research

17 December 2019, Bremen

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Page 2: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

Why a sediment model?

I fluxes between ocean and sedimentparticularly important for more realisticparameterisation of iron source

I sediment accumulation → lithosphereI and long-term climate impact through

weathering

Heinze et al. 1999, Glob. Biogeochem. Cycles

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Page 3: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

Composition of sediment and processes regulating fluxes

Boudreau, 1996, Diagenetic Models and their Implementation

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Page 4: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

Reactions in sediment

Sarmiento & Gruber 2006

Microbial remineralization of organic matter →typical sequence of redox zones (different electron acceptors):

I oxic remineralization

I denitrification

I Fe/Mn reduction

I Sulfur reduction ...

Dissolution of CaCO3: depends on local pH, TAlk, DIC,pressure, dominant CaCO3 form

Dissolution of biogenic opal depends on lokal Si(OH)4

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Page 5: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

REcoM uncoupled with MEDUSAI sinking flux of POC, PON, calcite, opal and lithogenic particles into benthic layerI release of dissolved components: proportional to microbial degradation of POM in

benthic layer and dissolution of calcite and opal

Hauck et al. 2014

I calcite dissolution independent of ΩI bottom water O2 and different redox processes not involvedI no permanent burial

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Page 6: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

MEDUSA = layered sediment model

A 1-dimensional sediment column definedat each horizontal grid point

I diffusive boundary layer on top (optional)

I reactive layer, with prescribed porosityprofile and bioturbation depth

I consolidated sediment for recording oldstates (optional)

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Page 7: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

Components and reactions considered

Solids POM (particulate organic matter)CaCO3 (calcite only, no aragonite)SiO2 (diatom frustules)lithogenic particles

Solutes carbonate systemNO−

3 , Si(OH)4, O2

Reactions oxic remineralizationdenitrificationCaCO3 and SiO2 dissolutiondissolved chemical equilibria

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Page 8: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

Interaction between sediment and water column

REcoM → Medusa

I bottom water T, S, p

I bottom DIC, TAlk, O2, NO−3 , Si(OH)4

I sinking fluxes: CaCO3, SiO2, POC, PON, dust

Medusa → REcoM

I diffusive fluxes: DIC, TAlk, O2, NO−3 , Si(OH)4

To close the system

I permanent burial of CaCO3 and SiO2→ terrestrial input (e.g. riverine)

I denitrification and PON burial→ nitrogen fixation/atmospheric N input

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Page 9: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

Coupled run

I at time step 0, MEDUSA first calculating until equilibrium

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Page 10: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

First results: CaCO3

left: Seiter et al. 2004, right: REcoM/Medusa

I mainly distributed in Atlantic,Indian Ocean and part of South Pacific

I lower fraction in dust regions

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Page 11: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

First results: opal

left: Seiter et al 2004, right: REcoM/Medusa

I mainly in high latitudes and equatorial Pacific

I data: also elevated in Indian Ocean

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Page 12: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

First results: particulate organic matter

left: Seiter et al 2004, right: REcoM/Medusa

I model: too high in coastal regions and too low in open ocean

I sinking and remineralisation in water column? degradation in sediment?

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Page 13: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

First results: oxygen utilization in sediment

left: Jahnke 1996, right: REcoM/MEDUSA

I high in coastal regions

I data: higher in open ocean e.g. Atlantic and equatorial Pacific →sinking?

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Page 14: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

First results: oxygen utilization in sediment

left: Jahnke 1996, right: REcoM (increased sinking)

I clear change in high latitudes, EP and small change in northern IOI nutrients and DIC in water column also affected → NPPI sediment model provides additional constraints and requires more tests

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Page 15: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

Next steps

I Further analysis of the first simulation, e.g. comparing with uncoupled model runI other components and processes, e.g. C isotopes and Fe, balancing denitrification

and burialI validation for present-day and then LGM and transition runI coupling with FESOM

Thanks for your attention!

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Page 16: Coupled ocean-sediment model REcoM/MEDUSA · MEDUSA = layered sediment model A 1-dimensional sediment column defined at each horizontal grid point I diffusive boundary layer on top

Next steps

I Further analysis of the first simulation, e.g. comparing with uncoupled model runI other components and processes, e.g. C isotopes and Fe, balancing denitrification

and burialI validation for present-day and then LGM and transition runI coupling with FESOM

Thanks for your attention!

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