delivering systematic information on indigenous farm animal genetic resources of developing...
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Presented by Tadelle Dessie at the National Institute of Animal Science (NIAS) Meeting on Development of Genomic Characterization Protocols for Rational Conservation and Utilization of Avian Genetic Resources, South Korea, October 2011.TRANSCRIPT
Delivering Systematic Information on Indigenous Farm Animal Genetic Resources
of Developing Countries:The concept of Country DAGRIS
Tadelle Dessie
Development of Genomic Characterization Protocols for Rational Conservation and Utilization of Avian Genetic
Resources, South Korea, October 2011
Outline• Livestock biodiversity: what is it about?
• Components of management of livestock biodiversity
• What is DAGRIS about?
• Approach in database development
• Structure of the database
• Current content
• System Demo
• Country DAGRIS
Biodiversity refers to the number, variety and variability of livestock.
Constituent hierarchical elements:• Genes (individual animals)• Breeds• Species, and• Ecosystems (production environment)
Livestock biodiversity: what is it about?
Components of management of livestock biodiversity
understanding•characterisation•documentation
conservation utilizationpriorities
approaches/strategiespolicies
prioritiesapproaches/strategies
policies
• No comprehensive source of information on developing countries Animal resources• Information on AnGR currently scanty and not much is in conventional publications• Efforts underway by researchers to identify and try to fill information gaps• Demand for systematic information is increasing• Need for a publicly accessible databases (electronic) as a tool for public awareness, research, training, genetic improvement and conservation
• Continental, Regional and National level
What are the problems?
Information on the extent of existing diversity, characteristics, use, production environment of
farm animals in Developing countries is the basis for their present as well as future sustainable
utilization
Hypothesis
• Is a public-domain electronic database of domestic AnGR designed to cater the needs of different stakeholders in developing countries
• A tool for improving understanding and management of AnGR
• An essential tool for research, training, public awareness, genetic improvement and conservation
• Developed and managed by ILRI
What is DAGRIS about?
Approach• Collect, organize and store information on animal resource and their
production environment from different sources
• Maintain integrity and validity of the stored information
• Provide easy and efficient access to information to all key stakeholders (researchers, trainers/students, extension personnel, policy makers and farmers)
• Incorporate analytical tools to support evidence based decision-making for utilization and conservation at
• country, regional and global level• Projects e.g. GEF Asia, ASARICA project countries, CRPs etc
Breed data (General)
Breed data(Country specific)
Species
Breed images
Population data
Trait data
Trait types
Trait category
Environment data
Regions
CountriesSource 2(NARS contact)
Source 1(Bibliography)
Web Link
Breed data (General)
Breed data
Species
Breed images
Population data
Trait data
Trait types
Trait category
Environment data
Regions
CountriesSource 2(NARS contact)
Source 1(Bibliography)
Web Link
Structure of the database
• breed description• breed distribution • breed status/trends• major characteristics, including performance• major uses
Current content
• production systems/environment • indigenous knowledge • bibliographic information• web links• summary tables on quantitative traits• User need based Meta analysis results• Non-curative data ????
Current content (cont’d)
Total data size: 41.13 MBTotal number of trait records: 24,536 Total number of breeds/ecotypes :
• Cattle (Africa): 176• Sheep (Africa and Asia): 170• Goats (Africa and Asia): 82• Chicken (Africa and Asia): 124• Pigs (Africa and Asia): 165• Yak (Asia-28): 30• Buffalo (Africa and Asia): 141
Current content (cont’d)
1) it provides essential bibliographic information to all breed-specific information in the database to lead users to more detailed research information;
2) it helps to identify information gaps in characterization information at breed level;
3) it makes use of available relevant breed characterization information from unpublished literature (unpublished research reports, field reports, official documentation, theses etc.);
4) it retains the original integrity of scientific information because results are captured ‘as published’; the original data is available to the user, including the source; and
5) it provides options to summarizing available documented information to facilitate decision making in research and policy formulation, which will be strengthened further in the near future through the development of decision support tools.
What makes DAGRIS unique?
System Demo
Front page
Front page
Search page
Search by trait data: Day old body weight (g)
Bibliographic sources of information
Trait Summary
Web links
Breed distribution
DAGRIS Statistics – Visitors by countries
Start date: June. 2011
End date:Aug., 2010
Total time: 91 day (s)
Distribution of frequent users of DAGRIS (n=5400)
Responses from DAGRIS users and the implication
• The responses to the release of DAGRIS has been remarkable with 100, 000’s hits to the websites and
• Numerous feedback on DAGRIS • content, functionality and suggestion
for directions for future development• Continuous upgrading of its contents • Similarly suggestions were provided to improve
DAGRIS information contents as development/research tool,
Responses from DAGRIS users and the implication
• Based on suggestions and requests • Geo-referencing the data –PED’s• Develop a meta analysis module
• Moreover, consistent with the Convention on Biological Diversity (CBD), countries would like to have full control of technical information on their genetic/animal resources. • Thus, recognizing the utility of the framework already
developed, countries are asking to be assisted to develop their own information systems.
• In order to address these suggestions and requests in a way
that facilitates the development of the country level information system while also reinforcing the capacity of the national institutions to manage such systems once these are in place.
Why we need to collaborate on country AGRIS development?
• The challenges and the changing global environment in which we operate demand new ways of doing business and stronger partnerships– That needs to mark a paradigm shift and commitment
to embrace innovative ways of collaboration between actors
• GEF Asia project is in a strategic place in the Asia continent makes it a prime partner to dev. C-DAGRIS
Purpose
The purpose of C-DAGRIS is to enhance development and research in sustainable conservation and utilization of animal resource of countries through the building and the delivery of a systematic breed-level information system at country level
Objective
• The main objective of this mini project is development of country based DAGRIS for selected Asian and African countries
The specific activities of the project are: 1. Develop country-modules of the database
that addresses their needs in relation to the main DAGRIS
other regional database; 2. Build up local capacity of institutions to
develop and administer the country-database on farm animal genetic resources;
3. Training staff members of national project partners on collection, summary
and management of breed-level data on indigenous animal genetic
resources;
The specific activities of the project are:
4. Training staff members of national project partners on advances in
sustainable utilization and management of indigenous animal genetic
resources information for research, teaching, development and policy making
purposes;5. Development of a module for remote
capturing of uncurated breed-level research information by users of country DAGRIS;
The specific activities of the project are:
6. Development of functionalities to geo-reference breed-level information in the databases (country DAGRIS and Global DAGRIS) opening up opportunities for overlaying other categories of geographic information systems (such as climate, natural resources, disease risk, market information etc)
7. Develop customized decision support tools using available information at national, regional and
continental level
Summary on the design of the project
• Linked to the ILRI Global DAGRIS, FAO’s DAD-IS etc
• Country-databases will be developed and administered by a national institution in each project country,
• Technical backstopping from ILRI and other stakeholders.
Summary on the design of the project
• The country-database will have a strong components of:
- data compilation, verification and entry through the national partnering institutions and
- will aim to respond to the needs of the local development, research and policy making process
• Beneficiaries of the output of this project include
researchers, trainers and their students at academic institution as well as extension personnel, policy makers and farmers
• Impact will be expected both on teaching, research, animal resource development and policy making areas
Impact and beneficiaries
System Demo Sri Lanka DAGRIS
• Develop the C-DAGRIS database for four of the
project countries;• Develop (customize) data compilation sheet;• Develop data entry module;• Trainee country focal people on use and
management of the database (data compilation, validation, entry etc)
• Including photos• Handover the database to manage and use• Popularizing the database to stakeholders
Next steps
Thank You
©ILRI (2010)
http://dagris.ilri.cgiar.org/