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Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria Syndrome

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Page 1: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Determinants of Health and Disease (7.295)

Srunphut Pukma

Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics,

Hutchinson Gilford Progeria Syndrome

Page 2: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Introductions!

• Welcome to MIT/BOSTON!!

Page 3: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

What is this class about…?

• To better understand the current medical needs and problems.

• To understand the biological and chemical basis of multiple diseases.

• To develop a keen perception of the medical professions (doctors, nurses, PAs, ems…)

• To construct a strong sense of biological and medical research ethics.

Page 4: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Determinants…of Health Care and Disease?

What!!?? I didn’t sign up for Linear!!...

What is the definition of

Determinants..?

Page 5: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Unmet Medical Needs

Page 6: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Biochemistry Review• Inorganic Chemistry– Electronegativity– Polarity (Charged and Uncharged)

• Cell Biology– Membranes– Protein Synthesis – Protein Trafficking and Modification

• Genetics– Genotype, Phenotype, Mutation (Sporadic)

• Anatomy and Physiology

Page 7: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

General Chemistry

Periodic Table of Elements

Page 8: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

The Atom! (Protons..Neutrons..Electrons)• Atomic compositions of

elements (Carbon Atom)• Nucleus (Proton + Neutrons)

• Protons are POSITIVE• Neutrons are NEUTRAL • Electrons are NEGATIVE

• Molecules form when two or more atoms are bonded through specific chemical connection

Page 9: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

The Water Molecule (H2O)

Page 10: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Electronegativity

• The tendency for an atom to attract (take/accept) electrons onto its valence shells to gain “Stability”.

Page 11: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Hydrogen Bonding

Page 12: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Water “loving” or “hating”

• Hydrophilic ~ having functional groups to “ATTRACT” Water mol.

• Hydrophobic ~ having functional groups to “REPEL” Water mol.

Page 13: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

**Discussion Question**

• Could you think of some examples in “Nature” that you commonly see Hydrophobic/Hydrophilic interactions?

Page 14: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Amino Acids (Polar, nonPolar, Neutral)

Page 15: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria
Page 16: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria
Page 17: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Protein Structure

Page 18: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

The Human Cell

Page 19: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Membrane Bi-layers

Page 20: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Nucleus and Nuclear Membrane

Page 21: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Chromosomes

Page 22: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Rough ER and Smooth ER

Page 23: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Ribosome Units

Page 24: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Protein Synthesis

Page 25: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Genetic Transcription

Page 26: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Genetic Translation

Page 27: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria
Page 28: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

**Discussion Question**• What is the resulting PROTEIN Sequence?

DNA: A T C G A C T A A G G C A T A A T A G C A MRNA: _________________________________PROTEIN: _________________________________

Page 29: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Protein Modification

Page 30: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

**Discussion Question**

• A special brain cell is making a protein, and where is bears a ABB-SBB consensus there will be a hydrophobic group attached. How will this protein look? Note, hydrophobic groups prefers to be in hydrophobic regions of the cell.

XXX-ABB-SSB-XXX-SSB-ABB-XXX-ABB-SSB-XXX

Page 31: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Case Study: Hutchinson Gilford Progeria Syndrome

Page 32: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Hutchinson Gilford Progeria Syndrome

Page 33: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Nuclear Lamina and Envelop

Page 34: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Lamin-A Maturation

Page 35: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Progeria’s Nuclear Lamina

Page 36: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Lonafarnib (FTIs)

Page 37: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

**Discussion Question**• Drug design is a vital component of treating a disease

or illness. When considering certain therapeutic treatments, many factors must be regarded (age, weight, sex). Discuss the following phrases: Agree/Disagree? Why/Why Not?– It is important to use multiple drugs to treat a disease.– People of the same age could consume the same drugs.– Specific drugs only serves specific purposes.– Killing animals is cruel, we should not use them to test drugs

or medicine.– Famous medicines should never lose their patents. –

Page 38: Determinants of Health and Disease (7.295) Srunphut Pukma Lecture 1: Drug Development, Protein Synthesis, Cell Biology, Genetics, Hutchinson Gilford Progeria

Medicinal Treatments: Case Study• Think like a chemist! You need choose drug(s) that will help

ameliorate the conditions of Progeria. 7 year old Sally Bloom, as other progeria patients, complains of problems with her fragile bones, her lack of body fat, and too much bad cholesterol (LDL). Design a treatment plan for Sally.

Drug Name: Treatment Side Effects/Common Results.

Bone Plus 3000 Helps strengthen bones, skeletal muscle, and teeth.

Causes lost of appetite for children under 5 years old.

F-Lipid X Prevents farnesylation of Lamin-A. Decreases Subcutaneous Fats

Retinal AAA Helps improve eye sight and eye health. NO Side Effects.

Calci-MAX Improves bone health. Increases LDL (Bad Cholesterol)

Lip-Detour Prevent farnesylation of Lamin-A. Increases HDL (Good Cholesterol)

OMEGA 91K Increase Subcutaneous Fats and Decrease LDL

Causes increase in Hair Growth on head.

Gamma-Gen Improve Alzheimer’s conditions Make bones brittle and breaks.