discriminating shapes: on violins and the latent morphology of grape leaves

168
Discriminating shapes: On violins and the latent morphology of grape leaves Dan Chitwood Donald Danforth Plant Science Center Seminar at Missouri Sta March 4, 2016

Upload: danchitwood

Post on 12-Jan-2017

352 views

Category:

Science


1 download

TRANSCRIPT

Page 1: Discriminating shapes: On violins and the latent morphology of grape leaves

Discriminating shapes

On violins and thelatent morphology of

grape leaves

Dan Chitwood

Donald DanforthPlant Science Center

Seminar at Missouri StateMarch 4 2016

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

How to quantify shapeAn example using violins

Photos from auctiongt9000 instrumentsgt400 violin makersgt400 years of history

Chitwood (2014) Imitation genetic lineages and time influenced the morphological evolution of the violin PLOS ONE

How to measure shape

Shape = xn yn

How to measure shapeCoordinates landmarks pseudo-landmarks

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 2: Discriminating shapes: On violins and the latent morphology of grape leaves

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

How to quantify shapeAn example using violins

Photos from auctiongt9000 instrumentsgt400 violin makersgt400 years of history

Chitwood (2014) Imitation genetic lineages and time influenced the morphological evolution of the violin PLOS ONE

How to measure shape

Shape = xn yn

How to measure shapeCoordinates landmarks pseudo-landmarks

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 3: Discriminating shapes: On violins and the latent morphology of grape leaves

How to quantify shapeAn example using violins

Photos from auctiongt9000 instrumentsgt400 violin makersgt400 years of history

Chitwood (2014) Imitation genetic lineages and time influenced the morphological evolution of the violin PLOS ONE

How to measure shape

Shape = xn yn

How to measure shapeCoordinates landmarks pseudo-landmarks

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 4: Discriminating shapes: On violins and the latent morphology of grape leaves

Photos from auctiongt9000 instrumentsgt400 violin makersgt400 years of history

Chitwood (2014) Imitation genetic lineages and time influenced the morphological evolution of the violin PLOS ONE

How to measure shape

Shape = xn yn

How to measure shapeCoordinates landmarks pseudo-landmarks

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 5: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shape

Shape = xn yn

How to measure shapeCoordinates landmarks pseudo-landmarks

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 6: Discriminating shapes: On violins and the latent morphology of grape leaves

Shape = xn yn

How to measure shapeCoordinates landmarks pseudo-landmarks

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 7: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 8: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

How to measure shapeChain code

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 9: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 10: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 11: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 12: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 13: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 14: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 15: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 16: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 17: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 18: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 19: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 20: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 21: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 22: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 23: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 24: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 25: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 26: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 27: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 28: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 29: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 30: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 31: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 32: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 33: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 34: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 35: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 36: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 37: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 38: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 39: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 40: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 41: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 42: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 43: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 44: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 45: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 46: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 47: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 48: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 49: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 50: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 51: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 52: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 53: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 54: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 55: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 56: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 57: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 58: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 59: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 60: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 61: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 62: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 63: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 64: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 65: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 66: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 67: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 68: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 69: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 70: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 71: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 72: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 73: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 74: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 75: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 76: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 77: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 78: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 79: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 80: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 81: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 82: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 83: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 84: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 85: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0

12

3

4

56

7

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 86: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape = Chain code is lossless

perfect reconstructionfrom compressed data

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 87: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 88: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Graphic Christine Daniloff Graphic Cardiff University

Graphic Workshop Mizzotti

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 89: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 90: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

Kuhl and Giardina Computer Graphics amp Image Processing (1982)

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 91: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

0 0 0 7 0 6 0 6 6 66 6 6 6 4 6 6 6 6 60 0 6 6 6 7 6 6 5 66 4 6 4 4 6 4 4 4 44 4 3 4 3 3 3 2 2 22 0 2 2 2 0 0 2 2 22 2 3 2 2 2 2 2 2 02 0 1 0

Shape =

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 92: Discriminating shapes: On violins and the latent morphology of grape leaves

How to measure shapeChain code + Fourier = Elliptical Fourier Descriptors

a1 a2 a3 hellip an

b1 b2 b3 hellip bn

c1 c2 c3 hellip cn

d1 d2 d3 hellip dn

Shape = Harmonic coefficients

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 93: Discriminating shapes: On violins and the latent morphology of grape leaves

The morphological evolution of violins

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 94: Discriminating shapes: On violins and the latent morphology of grape leaves

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 95: Discriminating shapes: On violins and the latent morphology of grape leaves

The morphological evolution of violinsThe effects of time space amp people on violin shape

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 96: Discriminating shapes: On violins and the latent morphology of grape leaves

The morphological evolution of violinsLinear Discriminant 1 is especially correlated with time

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 97: Discriminating shapes: On violins and the latent morphology of grape leaves

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 98: Discriminating shapes: On violins and the latent morphology of grape leaves

The morphological evolution of violinsWhy does shape correlate with time Violin makers

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 99: Discriminating shapes: On violins and the latent morphology of grape leaves

The New York Times

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 100: Discriminating shapes: On violins and the latent morphology of grape leaves

The morphological evolution of violinsInnovators and copiers of shape

Unique

Copierscopied

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 101: Discriminating shapes: On violins and the latent morphology of grape leaves

The morphological evolution of violinsDoes violin shape have a ldquogeneticrdquo basis

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 102: Discriminating shapes: On violins and the latent morphology of grape leaves

House GaglianoGiuseppe (Joseph)Gennaro (Januarius)NicoloacuteFerdinando

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 103: Discriminating shapes: On violins and the latent morphology of grape leaves

House TestoreCarlo GiuseppeCarlo Antonio

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 104: Discriminating shapes: On violins and the latent morphology of grape leaves

House DeganiGiulioEugenio

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 105: Discriminating shapes: On violins and the latent morphology of grape leaves

House GuarneriGiuseppe (del Gesuacute)Giuseppe (filius Andrea)Pietro (of Venice)Pietro (of Mantua)Andrea

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 106: Discriminating shapes: On violins and the latent morphology of grape leaves

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 107: Discriminating shapes: On violins and the latent morphology of grape leaves

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 108: Discriminating shapes: On violins and the latent morphology of grape leaves

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 109: Discriminating shapes: On violins and the latent morphology of grape leaves

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 110: Discriminating shapes: On violins and the latent morphology of grape leaves

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 111: Discriminating shapes: On violins and the latent morphology of grape leaves

Landmark-based Procrustes analysisSuperimposed homologous coordinates

Kerschbaumer and Sturmbauer (2011)International Journal of Evol Biol

Translate

Scale

Rotate

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 112: Discriminating shapes: On violins and the latent morphology of grape leaves

Species effects

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 113: Discriminating shapes: On violins and the latent morphology of grape leaves

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 114: Discriminating shapes: On violins and the latent morphology of grape leaves

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 115: Discriminating shapes: On violins and the latent morphology of grape leaves

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 116: Discriminating shapes: On violins and the latent morphology of grape leaves

Stephen Hales Vegetable staticks 1727

Developmental stageAllometric expansion

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 117: Discriminating shapes: On violins and the latent morphology of grape leaves

Chitwood and Sinha 2015

Leaf numberThe heteroblastic series

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 118: Discriminating shapes: On violins and the latent morphology of grape leaves

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 119: Discriminating shapes: On violins and the latent morphology of grape leaves

Species developmental stageamp leaf number effects

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 120: Discriminating shapes: On violins and the latent morphology of grape leaves

Species developmental stageamp leaf number effects

Shootbase

Shoottip

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 121: Discriminating shapes: On violins and the latent morphology of grape leaves

Species developmental stageamp leaf number effects

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 122: Discriminating shapes: On violins and the latent morphology of grape leaves

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 123: Discriminating shapes: On violins and the latent morphology of grape leaves

Species developmental stageamp leaf number effects

S1S2S9S10 S3S4S5S6S7S8

L1 L2

L1

L3 L4 L5 L6 L7 L8 L9 L10

DevelopmentalStage

S1 -gt S10

LeafNumberL1 -gt L10

Shootbase

Shoottip

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 124: Discriminating shapes: On violins and the latent morphology of grape leaves

Species developmental stageamp leaf number effects

Shootbase

ShoottipLeaf number

Developmental stage

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 125: Discriminating shapes: On violins and the latent morphology of grape leaves

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 126: Discriminating shapes: On violins and the latent morphology of grape leaves

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 127: Discriminating shapes: On violins and the latent morphology of grape leaves

Evolutionary vs developmental pathsin the Vitis leaf morphospace

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 128: Discriminating shapes: On violins and the latent morphology of grape leaves

Species identity can be predictedindependently from development

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 129: Discriminating shapes: On violins and the latent morphology of grape leaves

Species identity can be predictedindependently from development

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 130: Discriminating shapes: On violins and the latent morphology of grape leaves

Developmental stage can be predictedindependently from species identity

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 131: Discriminating shapes: On violins and the latent morphology of grape leaves

Leaf number can be predictedindependently from species identity

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 132: Discriminating shapes: On violins and the latent morphology of grape leaves

A morphometrics primer

The evolution of violin shape

Leaves as composites of latentdevelopmental amp evolutionary shapes

Outline

The shape of climate changeInterannual variability in grape leaf shape

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 133: Discriminating shapes: On violins and the latent morphology of grape leaves

Landmarks sensitive to allometry

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 134: Discriminating shapes: On violins and the latent morphology of grape leaves

Blade expands faster than vein

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 135: Discriminating shapes: On violins and the latent morphology of grape leaves

Blade expands faster than vein

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 136: Discriminating shapes: On violins and the latent morphology of grape leaves

Blade expands faster than vein

>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 137: Discriminating shapes: On violins and the latent morphology of grape leaves
>

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 138: Discriminating shapes: On violins and the latent morphology of grape leaves

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 139: Discriminating shapes: On violins and the latent morphology of grape leaves

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 140: Discriminating shapes: On violins and the latent morphology of grape leaves

Genetic amp developmental shapes are independent

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 141: Discriminating shapes: On violins and the latent morphology of grape leaves

Genetic amp developmental shapes are independent

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 142: Discriminating shapes: On violins and the latent morphology of grape leaves

Discriminating leaves from different yearsSame vines same stages

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 143: Discriminating shapes: On violins and the latent morphology of grape leaves

Discriminating leaves from different yearsSame vines same stages

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 144: Discriminating shapes: On violins and the latent morphology of grape leaves

Climate interannual variability201415 was colder amp drier than 201213

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 145: Discriminating shapes: On violins and the latent morphology of grape leaves

Climate interannual variability201415 was colder amp drier than 201213

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 146: Discriminating shapes: On violins and the latent morphology of grape leaves

Extant and geologic historyLeaf shape amp size correlate with climate

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 147: Discriminating shapes: On violins and the latent morphology of grape leaves

Extant and geologic historyLeaf shape amp size correlate with climate

Paleomap scotesecom

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 148: Discriminating shapes: On violins and the latent morphology of grape leaves

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 149: Discriminating shapes: On violins and the latent morphology of grape leaves

The future (hopefully)To California wine grapes and rootstocks

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 150: Discriminating shapes: On violins and the latent morphology of grape leaves

The future (hopefully)To California wine grapes and rootstocks

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168
Page 151: Discriminating shapes: On violins and the latent morphology of grape leaves

ThanksGrapes

Laura KleinAllison MillerJason LondoSusan RundellQuaneisha WoodfordDarren LiTommy YuJose LopezDanny GreenblattJulie Kang

CaulerpaTomatoesGrafting

Viktoriya ConevaMargaret Frank

>
  • Slide 1
  • Slide 2
  • Slide 3
  • Slide 4
  • Slide 5
  • Slide 6
  • Slide 7
  • Slide 8
  • Slide 9
  • Slide 10
  • Slide 11
  • Slide 12
  • Slide 13
  • Slide 14
  • Slide 15
  • Slide 16
  • Slide 17
  • Slide 18
  • Slide 19
  • Slide 20
  • Slide 21
  • Slide 22
  • Slide 23
  • Slide 24
  • Slide 25
  • Slide 26
  • Slide 27
  • Slide 28
  • Slide 29
  • Slide 30
  • Slide 31
  • Slide 32
  • Slide 33
  • Slide 34
  • Slide 35
  • Slide 36
  • Slide 37
  • Slide 38
  • Slide 39
  • Slide 40
  • Slide 41
  • Slide 42
  • Slide 43
  • Slide 44
  • Slide 45
  • Slide 46
  • Slide 47
  • Slide 48
  • Slide 49
  • Slide 50
  • Slide 51
  • Slide 52
  • Slide 53
  • Slide 54
  • Slide 55
  • Slide 56
  • Slide 57
  • Slide 58
  • Slide 59
  • Slide 60
  • Slide 61
  • Slide 62
  • Slide 63
  • Slide 64
  • Slide 65
  • Slide 66
  • Slide 67
  • Slide 68
  • Slide 69
  • Slide 70
  • Slide 71
  • Slide 72
  • Slide 73
  • Slide 74
  • Slide 75
  • Slide 76
  • Slide 77
  • Slide 78
  • Slide 79
  • Slide 80
  • Slide 81
  • Slide 82
  • Slide 83
  • Slide 84
  • Slide 85
  • Slide 86
  • Slide 87
  • Slide 88
  • Slide 89
  • Slide 90
  • Slide 91
  • Slide 92
  • Slide 93
  • Slide 94
  • Slide 95
  • Slide 96
  • Slide 97
  • Slide 98
  • Slide 99
  • Slide 100
  • Slide 101
  • Slide 102
  • Slide 103
  • Slide 104
  • Slide 105
  • Slide 106
  • Slide 107
  • Slide 108
  • Slide 109
  • Slide 110
  • Slide 111
  • Slide 112
  • Slide 113
  • Slide 114
  • Slide 115
  • Slide 116
  • Slide 117
  • Slide 118
  • Slide 119
  • Slide 120
  • Slide 121
  • Slide 122
  • Slide 123
  • Slide 124
  • Slide 125
  • Slide 126
  • Slide 127
  • Slide 128
  • Slide 129
  • Slide 130
  • Slide 131
  • Slide 132
  • Slide 133
  • Slide 134
  • Slide 135
  • Slide 136
  • Slide 137
  • Slide 138
  • Slide 139
  • Slide 140
  • Slide 141
  • Slide 142
  • Slide 143
  • Slide 144
  • Slide 145
  • Slide 146
  • Slide 147
  • Slide 148
  • Slide 149
  • Slide 150
  • Slide 151
  • Slide 152
  • Slide 153
  • Slide 154
  • Slide 155
  • Slide 156
  • Slide 157
  • Slide 158
  • Slide 159
  • Slide 160
  • Slide 161
  • Slide 162
  • Slide 163
  • Slide 164
  • Slide 165
  • Slide 166
  • Slide 167
  • Slide 168