dr. eric decarlo, professor marine geology and geochemistry division dr. grieg steward, associate...

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Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret McManus, Associate Professor Physical Oceanography Division Department of Oceanography School of Ocean and Earth Science and Technology (SOEST) University of Hawaii at Manoa 7 July 2009 Water Quality Sensing

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Page 1: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Dr. Eric DeCarlo, Professor

Marine Geology and Geochemistry Division

Dr. Grieg Steward, Associate Professor

Biological Oceanography Division

Dr. Margaret McManus, Associate Professor

Physical Oceanography Division

Department of Oceanography

School of Ocean and Earth Science and Technology (SOEST)

University of Hawaii at Manoa

7 July 2009

Water Quality Sensing

Page 2: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

The economic well-being of the State of Hawaii depends upon healthy coastal ecosystems.

Public confidence in water quality and safety is crucial.

Many current monitoring approaches are labor intensive and slow.

Our integrated coastal sensor/ocean observing system will:

Boost public confidence by emphasizing the usually high quality of Hawaii’s coastal waters.

Contribute to public safety by providing early warning of water quality problems and forecasting areas likely to be affected.

Water Quality Sensing

Page 3: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Water Quality Sensor Locations

NS-03NS-03

NS-04NS-04

University of Hawaii at ManoaMoana SurfriderUniversity of Hawaii at ManoaMoana Surfrider

Page 4: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Outline

1. Near Shore Water Quality Sensors

1. Water Quality Buoys

2. Pathogen Sampling

3. The Future

Page 5: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Near ShoreWater Quality Sensors

Page 6: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Sensors

SITE INSTRUMENTS MEASUREMENTS

NS01SBE 16plus,

WETLabs FLNTUSC, T, Chlorophyll,

Turbidity

NS02SBE 16plus,

WETLabs FLNTUSC, T, Chlorophyll,

Turbidity

NS03 SBE 37 SMP C, T, P

NS04 SBE 37 SMP C, T, P

Page 7: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Data Flow DiagramData Flow Diagram

Page 8: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

StatusSITE LAT / LON INSTRUMENTS MEASUREMENTS TELEMETRY STATUS POWER

NS01

21°17′16″ N 157°50′26″ W(Waikiki Yacht

Club)

SBE 16plus, WETLabs FLNTUS

C, T, Chlorophyll, Turbidity

Raven XT (Sprint)

Deployed 6/27/2008. Streaming data to KN database & HIOOS

webpage

Shore based AC

NS02

21°17′11″ N 157°50′34″ W(Hawaii Yacht

Club)

SBE 16plus, WETLabs FLNTUS

C, T, Chlorophyll, Turbidity

Raven XT (Sprint)

Deployed 7/28/2008. Streaming data to KN database & HIOOS

webpage

Shore based DC

NS03

21°16′49″ N 157°50′17″ W

(Atlantis Adventures /

Hilton Hotels)

SBE 37 SMP C, T, P Raven XT (Sprint)

Deployed 1/15/2009. Streaming data to KN database & HIOOS

webpage

Battery

NS04

21°15′57″ N 157°49′22″ W

(Waikiki Aquarium)

SBE 37 SMP C, T, P Raven XT (Sprint)

Site assessment complete and location selected. Deploy July

2009

Shore based AC

NS05 TBDSBE 16plus,

WETLabs FLNTUSC, T, P, Chlorophyll,

TurbidityRaven XT (Sprint)

Recon sites West of Ala Wai. Expected

deployment Fall 2009

TBD

Page 9: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Water Quality Buoys

Page 10: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Sensors

SITE INSTRUMENTS MEASUREMENTS

WQ-KN

SBE 16plus, WETLabs FLNTUS

CO2 sensorSBE 43

C, T, Chlorophyll, TurbidityCO2, O2

WQ-AW

SBE 16plus, WETLabs FLNTUS

CO2 sensorSBE 43

C, T, Chlorophyll, TurbidityCO2, O2

Page 11: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

StatusSITE LAT / LON INSTRUMENTS MEASUREMENTS TELEMETRY STATUS POWER

WQ-KN 1

21° 17’ 19.35” N 157° 51’ 54.00”

W

SBE 16 V2plus WETLabs FLNTUS

SBE 43LICOR CO2 sensor

C, T, Chlorophyll, Turbidity, DO (water)

O2 (air/water) CO2, (air/water)

Cellular (SBE)

Iridium (CO2)

Deployed 6/2008. Streaming data.

Battery

WQ-AW

21° 16’ 47.50” N 157° 50’ 54.00”

W

SBE 16 V2plus, WETLabs FLNTUS

SBE 43LICOR CO2 sensor

C, T, Chlorophyll, Turbidity, DO (water)

O2 (air/water) CO2, (air/water)

Cellular (SBE)

Iridium (CO2)

Deployed 6/2008. Streaming data.

Battery

Page 12: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Data Flow Diagram Data Flow Diagram

Page 13: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret
Page 14: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret
Page 15: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret
Page 16: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret
Page 17: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Early Warning System Alert

Matlab code on SOEST server

Automatic, hourly threshold checks•NS01, NS02 – salinity and temperature•USGS – rainfall, stream height, stream flow

If threshold is exceeded, the program sends text message to

Members of the Ala Wai Research Group•cell phone or emails (depending on choice)

Triggers sampling alert Other hourly checks (sends alerts if web sites are down) 

Page 18: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Early Warning System Alert

Title: EVENT ALERT Body: Manoa rainfall is currently 0.6ft.” or “NSO1 Salinity is 15 PSU.”

If multiple thresholds are exceeded, the message adjusts to include all of the values, i.e. “Manoa rainfall is currently 0.6ft, NS01 Salinity is 15 PSU and NS02 Salinity is 18 PSU.”  

Page 19: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

What about Pathogens?

Current sensors great for monitoring chemical and physical properties of the water

A major issue for coastal recreational water users is the presence of pathogenic bacteria and viruses

Page 20: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

The Dream

Tem

p.

(°C

)Salin

ity

Chlo

rophyll

Tu

rbid

ity

Pathogens

Page 21: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

The Reality

No off-the-shelf sensors yet available for pathogen detection in seawater

Conventional methods are labor-intensive, slow

Page 22: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

The Reality

Page 23: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Cultivation-Based Assays

Labor-intensiveHours to days

Page 24: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Molecular & Direct Detection Methods

Molecular - extract DNA, use tools to detect specific genes of interest

Direct Detection - Capture pathogenic viruses or bacteria on a sensor surface

Page 25: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Molecular MethodsLab in a can & Lab on a chip

Environmental Sample Processor (MBARI)

Expensive, complicatedHigh maintenance

Page 26: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Direct Capture

Pathogens

Specific Antibodies

Page 27: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Sensing the CaptureQuartz CrystalMicrobalance

Surface PlasmonResonance

http://www.biosensors.pan.olsztyn.pl/images/stories/reserearchprofile/qcm-2.jpghttp://spie.org/Images/Graphics/Newsroom/Imported/0882/0882_fig1.jpg

Page 28: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

The Challenges for Automation

Biofouling

What are we looking for? Too many potential pathogens to screen for all of them

The needle in a haystack

Page 29: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Biofouling

www.d-a-instruments.com/images/

Page 30: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

What are we looking for? Sewage Pathogens

There are many possible pathogens, usually present at low levels

Indicator organisms, not pathogenic, but more abundant and come from the same source (e.g., enterococci as indicators of sewage)

Non-sewage pathogens: some pathogens are not pollutants

Page 31: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Sewage IndicatorWater quality vs. Rainfall

Exceedance data calculated from Dept of Health, Clean Water Branch web site

Page 32: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Water QualityWhen it rains, it’s Poor

Page 33: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

EnterococciNot a Reliable Indicator

Data from Dept of Health, Clean Water Branch

Page 34: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

The Needle in the Haystack Pathogens are a tiny

fraction of the microbes in seawater

Outnumbered by “good” microbes by a millions or billions to one

Page 35: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

The Future (for Pathogens)

Pathogen sensors are under development, but there are hurdles to routine deployment

In the meantime, the abundance of non-sewage pathogens, like vibrios, may be predictable using data from existing sensors and predictive models.

Page 36: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

You could also go into our plans for water quality deployments in the Pacific region and illustrate the potential linkage to the instruments Rusty has out with CRED

CRED is backbone of ecological Part of IOOS future

The Future(Automated Water Quality Sensors)

Installation of water quality monitoring systems in each of the PacIOOS jurisdictions.

Page 37: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

You could also go into our plans for water quality deployments in the Pacific region and illustrate the potential linkage to the instruments Rusty has out with CRED

CRED is backbone of ecological Part of IOOS future

CRED study areas: Ecosystem Observations~50 islands & atolls

The FuturePartnership: Coral Reef Ecosystem Division

Page 38: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret
Page 39: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

March of 2006 375,000 gallons of raw sewage were diverted

into the Ala Wai canal when a sewer main in Honolulu cracked after several days of heavy rain.

Several people who came into contact with the contaminated water became ill, and there have been suggestions that one death resulted from the incident.

For several weeks after the incident, it was unclear (1) if there were harmful bacteria in our nearshore waters as a result of the diversion, (2) if the nearshore circulation patterns were retaining Ala Wai waters nearshore.

Without an idea of the baseline biological and physical conditions in the Ala Wai and adjacent coastal waters, it was impossible to determine when and if the system had returned to baseline

An Example of the Problem

Page 40: Dr. Eric DeCarlo, Professor Marine Geology and Geochemistry Division Dr. Grieg Steward, Associate Professor Biological Oceanography Division Dr. Margaret

Ala Wai Research Group Members include:

Drs. Geno Pawlak and Sergio Jaramillo, Ms Jennifer Patterson (Ocean Resource Engineering UH Manoa)

Drs. Margaret McManus, Eric DeCarlo, and Grieg Steward, Mr. Ross Timmerman, Mr. Mike Tomlinson, and Ms. Olivia Nigro (Oceanography UH Manoa)

Dr. Marc Ericksen and Mr. Andrew Rocheleau (Sea Engineering)

Army Corps of Engineers (CH2M Hill Lisa Kettley) USGS - invited

Regular Conference calls/workshops 3 times/year Linked by ALERT system Coordinated physical and biological sampling