electron density properties and interaction: quantum chemical topology investigation on aurn n 2+...
TRANSCRIPT
ORI GIN AL PA PER
Electron Density Properties and Interaction: QuantumChemical Topology Investigation on AuRnn
2+(n 5 1–6)
Li Xinying • Cao Xue
Received: 2 December 2013
� Springer Science+Business Media New York 2014
Abstract Quantum chemical calculations of the structures, stabilities and inter-
actions of the AuRnn2?(n = 1–6) series at the CCSD(T) theoretical level are per-
formed. The analyses of binding energies and average binding energies indicate that
the n = 1 and 2 systems are more stable than its neighbors. Topological analysis of
the natural bond orbital, electron density deformation, integrated charge transfer,
bond critical point properties, electron localization function, reduced density gra-
dient analysis are performed to explore the nature of the interaction. The results
show that the present Rn–Au2? interactions belong the covalent type for n = 1 and
2 systems and fall into intermediate interaction type with a pronounced covalent
character for the others.
Keywords Interaction � Electron density property � Covalent � Structure
and stability
Introduction
In recent years great effort has been expended to characterize systems in which
coinage metal (M = Cu, Ag and Au) is bound to a rare gas (RG) [1–15]. Interactions of
coinage metal ions with RG are truly remarkable since it proves the existence of a
stable compound between both types of elements considered in the past to be
archetypes of chemical inertia. Contrary to the suggestion, the chemistry of RG and
coinage metal (Cu, Ag and Au) is nowadays recognized to be broad and rich. The
features are manifestations of relativistic effects that contracts and stabilize the s and
p shells, but expanding and destabilizing the d and f shells. But what is the nature of the
L. Xinying (&) � C. Xue
School of Physics and Electronics, Institute for Computational Materials Science, Henan University,
Kaifeng 475004, People’s Republic of China
e-mail: [email protected]
123
J Clust Sci
DOI 10.1007/s10876-014-0694-4
bond between coinage metal and RG? Pyykko co-workers [16, 17] suggested that most
of the bonding (BD) interaction is covalent in character and strengthens along the Ar–
Kr–Xe series based on Mulliken and natural bond analysis by performing highly
correlated CCSD(T) calculations. While the interpretation was questioned by Read
and Buckingham [18] who considered higher order multipoles to describe induced
polarization effects on the Ar atom by saying that ‘‘covalency within the RGAu?
species appears to be unproven’’. To animate the dispute, a recent review of Bellert and
Breckenridge suggested [19], using an electrostatic model and parameters, that the
XeAu? system is described by a covalent bond in which the RG acts as electron donor,
while the nature of the bond in other RGAu? ions was left undecided. Recent
investigations show that there is clearly a covalent component in the BD of Xe(Kr/
Ar)–Au? [20, 21]. Belpassi et al. [20] investigated the electron density changes upon
formation of the Ng–Au bond in detail and characterize the typical covalent bond by
the pronounced charge accumulation in the middle of the Ng–Au inter-nuclear region.
In 2001, Walker et al. [22] reported the unexpected experimental and theoretical
determination of stable MArn2? clusters and it clearly shows the pronounced
interaction between Ar and doubly charged coinage metal cations M(II), M2?
(M = Cu, Ag and Au). The results show that the binding energy of the doubly charged
Ar–Au2? is greater than that of the singly charged Ar–Au? [23]. The interactions
between RG and Au? strengthen along the He–Xe series [23], we may infer that the
interaction between RG and Au(II) would also strengthen along the RG series. Radon,
element 86, is the heaviest experimentally known RG, it is expected that Rn can
directly bonded to the doubly charged Au cation, Au(II), with considerable bond
energy, which is in fact generally regarded as the element whose chemistry is most
affected by relativistic effects [24]. Given the large differences between the second
ionization energy of Au (Au??Au2?, 20.51 eV) and that of an Rn atom (11.71 eV),
considerable charge transfer might have been expected. In particular, Rn is the largest
radiation risk in many countries such as Finland [25]. Its diffusion in air, water, and
building materials is related to its size and binding energy, thus understanding its
interaction properties is of fundamental interest. However, the theoretical investiga-
tions including geometrical structures, electronic structures, especially the roles of
interactions of small AuRnn2? clusters are less reported. Understanding of their
interaction mechanism leaves much room for improvement, and detailed theoretical
investigations are desired.
Reported here are the results of the calculations undertaken on the small
AuRnn2?(n = 1–6) series using the coupled cluster method with single and double
excitation and a non-iterative correction for triple excitations (CCSD(T)) [26, 27],
with the aim of not only understanding the behavior of the systems, but also to give
an insight into the nature of the interaction mechanism between Rn atom(s) and
coinage metal cations, Au2?.
Computational Details
Interactions of the RG containing compounds often require high angular momentum
functions for accurate description [28]. For the present clusters, the relativistic
L. Xinying, C. Xue
123
effects are very important, such as gold, has a very rich and unusual chemistry with
varying physicochemical properties due to the strong relativistic effects, which
considerably decrease the size of the valence 6s orbital and lead to the expansion of
the 5d orbital resulting in this kind of unusual behavior. Our previous results
indicate that both electron correlation effects and relativistic effects play an
important role for the coinage metal-RG clusters [29], and accounted for using the
CCSD(T) method and the relativistic pseudo-potentials and the corresponding basis
sets. The 19-valence electron relativistic pseudo-potential and its matching basis
sets (37s33p22d2f1g)/[5s5p4d2f1g] are employed for the Au atom [30]. The
26-valence electron basis sets (24s18p11d2f1g)/[6s6p4d2f1g] are employed for Rn
atom(s) [31].
The calculations were performed with the Gaussian 03 W program [32]. The
basis set superposition error (BSSE) is corrected by using the counterpoise
procedure of Boys and Bernardi [33]. To explore the nature of the interactions, the
natural bond orbital (NBO) analysis is used [34, 35]. The NBO analysis is
performed with the NBO program as implemented in the Gaussian 03W.
Results and Discussion
The equilibrium structural parameters, binding energies and average binding
energies calculated at the CCSD(T) theoretical level are given in Table 1. The
nature of the optimized structures with lowest total energy as potential energy
minima have been established in all cases by verifying that all the corresponding
frequencies are positive. The binding energy is referenced to the separated atom
limit consisting of the ground state Rn atoms and Au(II) s0d9 ground states. The
global minimum energy structures of AuRnn2?(n = 1–6) are shown in Fig. 1.
Structures and Stabilities
For n = 1 system, the CCSD(T) method obtained the equilibrium Rn–Au2?
distance of 269.4 pm, and binding energies of 5.2379 eV, respectively. The similar
bond distance and greatly enhanced stability compared to the singly charged Rn–Au?
calculated at the same theoretical level with the same basis sets (265.4 pm; 1.3945 eV)
were obtained [36]. For n = 2 system, any attempt starting from bent triangular
geometries with C2v symmetry after the geometry optimization ends up as the linear
configuration with D?h symmetry. We note that the Rn–Au2? distance, 248.1 pm, is
shortened considerably compared to that of the present AuRn2? system (269.4 pm)
and the previous reported value of the singly charged AuRn2? system (264.5 pm) [36].
For n = 3 system, all pyramidal, three-dimensional initial geometries, after the
geometry optimization, end up planar structures with C2v symmetry. While the
symmetry of the singly charged AuRn3? is D3h [36], and the structural difference may
be resulted from the electronic structure of the present doubly charged Au2? (6s05d9)
and the previous singly charged Au? (6s05d10). The present structures accords with
Walker et al. [22] results of MArn2? of D?h(Linear), C2v(Planar), D4h(Planar),
Electron Density Properties and Interaction
123
C4v(Pentahedron) and D4h(Octahedron) for n = 2–6, respectively, calculated at MP4/
LANL2DZ theoretical level, while we obtained the greatly enhanced stabilities.
One can see from Fig. 1 that the AuRnn2? system can be formed by adding one Rn
atom to the stable AuRnn-12? structures without obvious changes of its structural
parameters. For n = 2, 4, and 6 systems, their D?h(Linear), D4h(Planar), and
D4h(Octahedron) symmetries arranged Au and Rn atoms in linear coordination.
While for the n = 3 and n = 5 systems, they can be formed by adding one Rn atom
to the stable n = 2 and n = 4 structures, respectively; without obvious changes of
its structural parameters thus the Rn atoms and Au are also approximately arranged
in linear coordination. It is well known that coinage metal in the valence state ?I,
M?, very much prefer linear coordination [37]. The present results indicate that the
Au(II) valence state also prefer linear coordination.
Table 1 Structures and stabilities performed at CCSD(T) theoretical level
n R1 (pm) R2 (pm) A (�) Eb (eV) Eb-ave (eV)
1 269.4 5.2379 2.6190
2 248.1 A312 = 180.0 7.6466 2.5489
3 289.2 263.2 A314 = 144.7 8.2329 2.0582
4 276.4 A213 = 90.0 11.4294 2.2859
5 306.5 278.2 A214 = 168.4 11.9555 1.9926
6 323.4 278.5 A214 = 180.0 12.3970 1.7710
Fig. 1 CCSD(T) structures for AuRnn2? clusters. Details of structures are given in Table 1
L. Xinying, C. Xue
123
In cluster physics, the binding energy (Eb) and average binding energy (Eb-ave)
are sensitive quantities that reflect the relative stability of clusters. Here they are
defined as:
EbðnÞ ¼ EðAu2þÞ þ nEðRnÞ � EðAuRn2þn Þ ð1Þ
Eb�aveðnÞ ¼ ½EðAu2þÞ þ nEðRnÞ � EðAuRn2þn Þ�=nþ 1 ð2Þ
where E(….) is the total energy of the corresponding system.
The results collected in Table 1 clearly show that the binding energies increase
monotonically as the size of n increase, which means that the clusters can
continuously gain energy during the growth process. One can see from Fig. 1 that
the Au atom was found to be located between the Rn atoms, thus the number of Au–Rn
interaction increases monotonically as the size of n increase while the Rn–Rn
interaction does not have the same behavior; thus it results in the monotonically
increase of binding energies and irregular variable trend of the average binding
energies. The results collected in Table 1 clearly shows the enhanced stabilities of
the n = 1 and 2 systems.
NBO Analysis
To understand the interaction mechanism, we performed the NBO analysis of the
stable species, AuRn2? and AuRn22?. The NBO’s are a set of localized orbitals that
fulfill the requirements of orthonormality and maximum occupancy on the grounds
of the calculated MO’s after diagonalizing the corresponding electron density
matrices. The transformation to NBO produces both highly occupied and nearly
empty localized orbital. The former can be classified as lone pairs (LP) or BD pairs.
For AuRn2? system, the NBO results show that there are one alpha r-bond and
one beta r-bond. Each BD (rAu–Rn) can be written in terms of two directed valence
hybrids, hAu and hRn, on the bonded centers Au and Rn, respectively.
The alpha BD orbital can be expressed as
rAu�Rn ¼ 0:9329hRn þ 0:3602hAu ð3aÞThe hRn and hAu can be described as linear combination of the natural atomic
orbital on its center as follows:
hAu ¼ �0:9249ð6sÞ � 0:3586ð6pzÞ ð3bÞhRn ¼ �0:2241ð6sÞ þ 0:9706ð6pzÞ ð3cÞ
For the beta BD:
rAu�Rn ¼ 0:7164hRn þ 0:6977hAu ð4aÞhAu ¼ �0:4412ð6sÞ � 0:1663ð6pzÞ � 0:8767ð5dz2Þ ð4bÞ
hRn ¼ 0:9932ð6pzÞ ð4cÞFor alpha orbital, the Au–Rn r-BD is resulted from the overlap of a 6s6pz
(mainly 6s) hybrid on Au and 6s6pz (mainly 6pz) hybrid on Rn atom; it can be seen
from the natural atomic orbital occupancies, 6s0.1226pz0.018 for Au and 6s0.9916pz
0.870
Electron Density Properties and Interaction
123
for Rn. For beta orbital, the 5d orbital plays an important role. The interaction
comes from the overlap of the 6s6p5d (mainly 5dz2) hybrid on Au and the 6pz orbital
of Rn atom. The corresponding orbital occupancies are 6s0.0956pz0.0155dz2
0.375 for Au
and 6pz0.506 for Rn.
For AuRn22? system, NBO results show that there are one alpha r-bond, one
beta r-bond and one beta p-bond between Au and each Rn atom. Both r-bonds are
also resulted from the overlap of 6s6p (alpha)/6s6p5d (beta) hybrid on Au and 6s6pz
hybrid on Rn atom. While for the p-bond, it can be expressed as:
pAu�Rn ¼ 0:9132hRn þ 0:4076hAu ð5aÞhAu ¼ 0:3241ð6pxÞ þ 0:6121ð6pyÞ þ 0:3285ð5dxzÞ þ 0:6204ð5dyzÞ ð5bÞ
hRn ¼ 0:4659ð6pxÞ þ 0:8797ð6pyÞ ð5cÞThe present p-bond is resulted from the overlap of a 6px6py5dxz5dyz hybrid on Au
and 6px6py hybrid on Rn atom; it can be seen from the natural atomic orbital
occupancies, 6px0.0286py
0.0405dxz0.8535dyz
0.481 for Au and 6px0.9456py
0.840 for Rn. For a
p-bond, the orbital share a nodal plane which passes through both of the involved
nuclei (Au and Rn). Since the overlap of the orbital to form a p-bond is not as great
as the overlap obtained from r-bond (which is directed along the bond axis.
Figure 2), p-bond in general is weaker than the r-bond. A p-bond, along with an
r-bond forms a ‘‘double’’ bond. We note that the p-bond could not be found for
other systems (n = 1, 3–6). The existence of the p-bonds greatly shortens the
Rn–Au distance, therefore the n = 2 system has the smallest Rn–Au distance
among the present n = 1–6 systems (Table 1).
As mentioned above, considerable charge transfer from Rn atom(s) to Au might
have been expected due to the great difference of ionization energies between Au
and Rn. The natural population analysis (NPA) and occupancies of valence orbital
of Au and Rn clearly show the charge transfer mechanism. From Fig. 3 we note
that, for Rn atom, the occupancy changes of the 6s orbital, 2.0-Occ6s, are \0.1 for
all the systems while considerable changes can be found for the 6p orbital. It
indicates that the electron transferred mainly from the 6p orbital of Rn atom to the
Au atom. For Au atom, the NPA values (the 2.0-NPA value gives the amount of
electrons transferred from Rn atom(s) to Au atom) decreased monotonically with
cluster size n and it indicates that more and more electrons transferred to the Au
atom. Note that for n = 5 and 6 systems, the NPAs of Au are negative; it indicates
that more than 2.0 electrons transferred to Au atom. The occupancies of the 6s (Au)
increase rapidly from n = 1–2 and then reach a plateau for n = 2–6 systems. The
occupancies of 5d orbital decrease from n = 1–3 and then increase to a plateau for
n = 4–6 systems. While for 6p orbital, the occupancy increase monotonically with
the cluster size n and it indicates that more and more charge transferred to the 6p
orbital and thus they play an important role in the interaction. It should be pointed
out that the small values of occupancy changes of the 5d orbital of Au for n = 2 and
3 systems do not indicate that the 5d orbital play the trivial role. For example for
n = 2 system, the occupancy changes of the 5d orbital, 0.24, is very small, while the
NBO analyses show that the 5dz2 orbital is involved in the r-bond and the 5dxz5dyz
L. Xinying, C. Xue
123
orbital is involved in the p-bond, and they play very important role in the
interaction, as can be seen from the occupancy, 5d1:999xy 5d1:851
xz 5d1:479yz 5d1:999
x2�y2 5d1:918z2 .
Electron Density Properties
Topological analysis of the electron density deformation, integrated charge transfer,
bond critical point (BCP) properties, electron localization function (ELF) and
reduced density gradient (RDG) are performed on AuRn2? and AuRn22? to explore
the nature of interaction. The results were calculated by Multiwfn and plotted by
VMD program [38, 39].
Electron Density Deformation Analysis
We look at a graphical representation of the electron density deformation upon the
formation of the interactions between the fragments (Au2? and Rn) to take a
qualitative and insightful approach to understand the nature of the Rn–Au2?
interaction. The electron density deformation function, Dq(r), is defined as the
difference between the total electron density of the system and the promolecule
Fig. 2 The r-bond and p-bondof AuRn2
2?. The isosurfacevalue is 0.05
Fig. 3 Occupancies of valence orbital and NPA of Au and Rn. For Rn atom, the value of occupancychanges of 6s and 6p are, 2.0-Occ6s and 6.0-Occ6p. The occupancy change of 5d of Au: Occ5d-9.0. Forn = 3 system, three Rn atoms are arranged in different position and labeled 2, 3 and 4 (Fig. 1), they havedifferent NPAs and orbital occupancies
Electron Density Properties and Interaction
123
density of the non-interacting fragments (in the same positions); this function is
regarded as a deformation density associated with the redistribution of the electron
charge when the system forms from the constituent fragments [40]. In Fig. 4, the
contours of the electron density difference between the complexes and the non-
interacting fragments (in the same positions) for AuRn2? and AuRn22? are plotted,
the blue contours refer to positive differences (density accumulation) and the red
contours are negative ones (density depletion). Obvious changes of the electron
density distribution can be seen in Fig. 4, there is electron accumulation in the
Rn–Au2? interaction region, and it enhances the stability of the species.
To make the picture of the BD which emerges from the density difference plots
more quantitative, we plot the curve representing the partial integral of the electron
density difference Dq along the inter-nuclear (z) axis, integrated charge transfer
Q(z), and it can measures the actual electronic charge fluctuation with respect to the
isolated fragments, as it moves along the inter-nuclear axis (from -? to z) and is
defined as follows:
QðzÞ ¼Z�1
�1
dx
Z�1
�1
dy
Z�1
�1
Dqðx; y; zÞdz ð6Þ
Imagining a point, z = z0, on the inter-nuclear z axis to identify a perpendicular
plane passing through that point, the corresponding value of Q(z0) measures the
amount of charge has moved from the right side to the left side of the plane, with
respect to the situation in the non-interacting fragments. Therefore the negative
Fig. 4 Integrated charge transfers as a function of the inter-nuclear distance and contour plots of theelectron density difference of AuRn2? and AuRn2
2?. The Q values are calculated with the followinglower and upper limit: x = [-6, 6], y = [-6, 6], z = [-6, 6]. AuRn2?: Au (0, 0, 0), Rn (0, 0, -2.694);AuRn2
2?: Au (0, 0, 0), Rn (0, 0, -2.481), Rn (0, 0, 2.481). Contour levels are 2m 9 10n a.u., with m = 1,2, 3 for every n of set n = -3, -2, -1, 0
L. Xinying, C. Xue
123
value indicates charge from left to right. The difference between two Q values,
Q(z1) and Q(z2), shows the net electron influx into the region delimited by the two
planes (z = z1 and z = z2). The regions of the Q(z) curve with a negative slope
correspond clearly to zones of charge depletion (red contours), while charge
accumulates where Q picks up (blue contours). The first thing we note that the Q is
negative everywhere in the left molecular region (z \ 0), indicating that, at each
point, there has been a net shift of charge toward the Au atom. The plots make clear
the pronounced electron depletion around the Rn site and charge transfer to the
Rn–Au inter-nuclear region.
For AuRn2? (Black curve in Fig. 4), from z = -6 to -2.69 A, left side of the Rn
atom, the Q curve has the negative slope and it indicates the net electron charge loss.
The loss takes place until 1.64 A, z = -1.64, from the Au site, and there is an
inversion and charge starts to re-accumulate rapidly until about 0.51 A, z = -0.51,
when part of the lost charge is recovered, it (from z = -1.64 to -0.51) corresponds
to the blue contour regions, the interaction region of AuRn2?. We can estimate the
amount of charge accumulate to the interaction inter-nuclear region, Q(-0.51) to
Q(-1.64) = 0.297 a.u., and it enhances the stability and appears to be an indicator
of the interaction strength. In addition, we note that around the Au nuclear a narrow
zone (about z = -0.25 to 0.25) where Q picks up rapidly and becomes zero,
implying a corresponding considerable net electron accumulation on this zone. It
indicates that the charge is transferred not only to the interaction inter-nuclear
region but also to the region surrounding the Au atom itself, which may be
interpreted as the partial filling of the empty valence 6s6p orbital and accords
qualitatively with the occupancies analysis results (see ‘‘NBO Analysis’’ section).
For AuRn22? (Green curve in Fig. 4), we can estimate that about 0.301 a.u.
[Q(-0.524) to Q(-1.679) = 0.301] charges accumulate to the interaction inter-
nuclear region. We note that, around the Au nuclear, the Q picks up more rapidly
than that of n = 1 system, it indicate that the occupancies of 6s6p for n = 2 system
are greater than those of n = 1 system, as can be seen from Fig. 3.
There are two r-bonds (one alpha bond and one beta bond) in Au–Rn interaction
region for n = 1 system, while there are three bonds (one alpha r-bond, one beta
r-bond and one p-bond) in the region for n = 2 system. About 0.30 electrons
transferred to the interaction region for both systems. One can infer that the amount
of electrons, engaged in the r-bonds, in n = 2 system are smaller than those of
n = 1 system; namely, the r-bonds in n = 2 system are weaker than those of n = 1
system. In general, the p-bond is weaker than the r-bond. Therefore both systems
have similar stability according to the average binding energies analysis.
The main feature of the interaction is a pronounced charge accumulation in the
middle of the region between the Rn and Au nuclei, this feature is a clear indication
of the formation of a covalent bond.
Atoms in Molecules (AIM) Analysis
According to the AIM theory of Bader [41], the chemical BD can be characterized
by the existence of a (3, -1) type of BCP and the corresponding bond path. Its
nature is revealed by descriptors at the BCP such as the electron density q(r) and
Electron Density Properties and Interaction
123
Laplacian r2q, which is the sum of three curvatures of the electron density Hessian
matrix, k1, k2, and k3. Chemical BDs can be divided into two groups according to
the Laplacians: shared interactions and closed shell interactions, which correspond
to the negative and positive Laplacian. It is also suggested that local energy density
E(r) at the BCP, the sum of the kinetic energy density and the potential energy
density, to distinguish between covalency and ionicity [42]. Chemical BD
characterized by positive Laplacian r2q(r) and negative E(r) is referred as
‘‘intermediate type’’ [43]. Note that, for n = 1 and 2 systems, the Laplacian values,
0.046 and 0.054, are very small; moreover, the values of energy densities and k2 are
more negative than others, taking the binding energies into consideration, the
interaction can be classfied in the covalent type. While interactions in n = 3–6
systems (negative E(r) and positive Laplacian value, Table 2) all fall into the
intermediate type.
ELF Analysis
The ELF introduced by Becke and Edgecombe has been widely used as a
convenient descriptor of the chemical bond in a great variety of systems [44]. It is
conveniently mapped on the interval (0, 1) and provides a rigorous basis for the
analysis of the interaction. A region of the space with a high ELF value is
interpreted as a region where is more probable to find an electron or a pair
of localized electrons. ELF = 0 correspond to a delocalized system, 1 to a
completely localized situation, and 0.5 is the value one should obtain for the
homogenous electron gas. The concept of basin (domain) was first introduced by
Bader in AIM theory [41], and it was transplanted to the analysis of ELF by Savin
and Silvi [45] and Savin et al. [46]. Topological analysis of the ELF provides a
partition of the molecular space into basins of attractors which have a clear chemical
signification: (i) core basins are located around nuclei, and (ii) valence basins are
characterized by their synaptic orders: monosynaptic basins represent the LP,
whereas disynaptic basins belong to the covalent interaction.
The reduction of the localization domains obtained by the ELF approach (Fig. 5)
yields important information about electron localization processes. It was previously
Table 2 BCP properties at CCSD(T) level
n BCP (A–B) q (10-2) k2 (10-2) Lap(10-1) E (10-2)
1 (Au–Rn2) 7.8220 -6.7815 0.4584 -2.7014
2 (Au–Rn2, 3) 10.1294 -6.7503 0.5406 -4.3102
3 (Au–Rn2) 4.9809 -3.4451 0.9605 -1.0418
(Au–Rn3, 4) 6.9468 -6.2500 1.4062 -2.7075
4 (Au–Rn2, 3, 4, 5) 6.3717 -4.8657 0.9344 -1.7669
5 (Au–Rn6) 3.5660 -2.3126 0.7979 -0.4779
(Au–Rn2, 3, 4, 5) 6.1454 -4.6719 0.9385 -1.6326
6 (Au–Rn6, 7) 2.6666 -1.6288 0.6379 -0.2172
(Au–Rn2, 3, 4, 5) 6.1062 -4.6386 0.9366 -1.6127
L. Xinying, C. Xue
123
adopted as a tool for the understanding the chemical BD [47]. For the ELF value
equal to 0.5—corresponding to a totally delocalized electron density—there are
only distinguishable valence basins of the Rn atom(s) and one pseudo-valence
domain of gold V(Au1). For AuRn2?, a further bifurcation occurs at ELF = 0.58,
giving rise to BD point attractors disynaptic domain V(Rn2, Au1). The ELF = 0.80
map clearly shows the non-BD ring attractor domain V(Rn2) and core basin C(Rn2).
While for AuRn22?, four attractors around the Rn2 atom (ELF1 = ELF2 = 0.717,
ELF3 = ELF4 = 0.823) were found, therefore there are four valence domains,
Vi(Rn2), i = 1–4, as shown in Fig. 5, and volumes of the V1(Rn2) and V2(Rn2) are
very small. The Rn3 atom has the same trend. According to the NBO analysis, the
disynaptic basins V(Rn2, Au1) clearly corresponds to the r-bond of n = 1 system,
while the V1(Rn2) and V2(Rn2) correspond to the p-bond for AuRn22? system.
After the basins were generated, some analyses based on the basins can be
conducted to extract information of chemical interest. One can integrate electron
density in the basins to acquire electron population numbers in the basins
�NXi¼Z
Xi
qðrÞdv ð7Þ
and investigate the localization index (LI) in the basins and delocalization index
(DI) between basins. LI measures how many electrons are localized in a basin in
average, while DI is a quantitative measure of the number of electrons delocalized
(or say shared) between two basins. The results are given in Table 3. The near-grid
method [48] is utilized in calculation by Multiwfn program [38].
For n = 1 system, AuRn2?, the C(Rn2) and V(Au1) domains contain 17.466 and
17.408 electrons, which is in line with the fact that the Rn atom has 18 (5s25p65d10)
electrons in its pseudo-core and Au atom has 17.636 (the NPA of Au is 1.364)
electrons. Also, the average population number in V(Au1, Rn2) is 0.708,
approximately reflecting that in average there is 0.708 electron shared between
Au and Rn and thus it enhanced the stability. Between C(Rn2) and V(Au1), namely
DI(C(Rn2), V(Au1)), 0.076, the value is trivial, reflecting that the electron
delocalization of atomic core of Rn atom is rather difficult, which is in accord with
the NBO analysis that the interaction come mainly from the 6s6p hybrid of Rn atom.
DI(C(Rn2), V(Rn2)) and DI(C(Rn2), V(Au1, Rn2)) are 3.936 and 0.215,
representing that the electrons in C(Rn2) have more pronounced probability to
exchange with the ones in V(Rn2) compared to V(Au1, Rn2) since the C(Rn2) was
surrounded by V(Rn2). The DI(V(Rn2), V(Au1)) is 0.628, it quantitative indicate
that there are 0.628 electrons delocalized (shared) between the two basins and
accords with the average population in V(Au1, Rn2). LI value of V(Rn2) and
V(Rn2, Au1), 4.880 and 0.135, is less than their average electron population
numbers distinctly, 7.416 and 0.708, revealing that the electrons in these basins do
not express very strong localization character.
For n = 2 system, AuRn22?, between Rn and Au region, one can not find any
disynaptic basins. While the small domain V1,2(Rn2) give evidence of the p-bond
and its average population number, 0.490, is less than that of V(Au1, Rn2) in n = 1
system. We note that the average populations of the V(Au1), 17.408 and 17.456 for
Electron Density Properties and Interaction
123
n = 1 and n = 2 systems, are similar; while the LI of the latter, 16.276, is smaller
than that of the former, 16.840. It indicates that the valence electrons of Au of n = 2
system express stronger localization character. NBO analysis shows that for n = 2
Fig. 5 The reduction of the localization domains in AuRn2? and AuRn22?
Table 3 The DI and LI of AuRn2? and AuRn22?
DI V(Au1) V(Rn2) V(Au1,Rn2) C(Rn2) LI
AuRn2? V(Au1) 1.128 0.628 0.424 0.076 16.840 (17.408)
V(Rn2) 0.628 5.071 0.507 3.936 4.880 (7.416)
V(Au1, Rn2) 0.424 0.507 1.146 0.215 0.135 (0.708)
C(Rn2) 0.076 3.936 0.215 4.228 15.352 (17.466)aAuRn2
2? DI V(Au1) V3(Rn2) V1(Rn2) C(Rn2) LI
V(Au1) 2.359 0.374 0.179 0.077 16.276 (17.456)
V3(Rn2) 0.374 3.934 0.209 1.902 1.707 (3.674)
V1(Rn2) 0.179 0.209 0.836 0.185 0.072 (0.490)
C(Rn2) 0.077 1.902 0.185 4.261 15.308 (17.439)
The electron population numbers are given in parenthesesa For AuRn2
2?, there are 11 basins, V(Au1), four valence basins and one core basin for each Rn atom.
The DI should be an 11 9 11 matrix. Here the DI of the V(Au1), V3(Rn2), V1(Rn2) and C(Rn2) are
given. The diagonal terms are the sums of the elements in corresponding row/column of the 11 9 11
matrix
L. Xinying, C. Xue
123
system the 5dz2 and 5dxz5dyz orbitals are involved in the r-bonds and p-bonds,
respectively; while for n = 1 system only the 5dz2 orbital engages in the interaction.
RDG Analysis
Yang and co-workers [49] developed an approach to detect the weak interactions in
real space based on the electron density and its derivatives. The RDG is a
fundamental dimensionless quantity coming from the density and its first derivative
RDG ¼ 1=ð2ð3p2Þ1=3Þ rqj j=q4=3 ð8ÞThe weak interactions can be isolated as regions with low electron density and
low RDG value. To understand the interaction in more detail, the sign of k2 (the
second eigenvalue of the electron density Hessian matrix) is utilized to distinguish
the bonded (k2 \ 0) from nonbonded (k2 [ 0) interactions. The plot of the RDG
versus the electron density q multiplied by the sign of k2 can analyze and visualize a
wide range of interactions types. As can be seen in Fig. 6, spikes are found in the
low-density, low-gradient region, indicative of weak interactions in the system and
the electron density value at the RDG versus sign(k2)q peaks (electron density of
BCP) itself provides the information about the strength of interaction. Large,
negative values of sign(k2)q are indicative of stronger attractive interactions (spikes
in the left part in Fig. 6), while if it is large and positive, the interaction is repulsion
(spikes in the right part) [49]. RDG analysis can discriminate between different
types of interactions: (1) very low density values (i.e., q\ 0.005 a.u.) generally
map to weaker dispersion interactions, (2) slightly higher density values (i.e.,
0.005 \ q\ 0.05 a.u.) map to stronger noncovalent interactions.
Fig. 6 Plots of the RDG versus sign(k2)q and RDG isosurface (RDG = 0.3 and 0.5) for AuRn2? andAuRn2
2?
Electron Density Properties and Interaction
123
From Fig. 6 we find that the RDG = 0.3 line crosses only the attractive
interaction spikes while the RDG = 0.5 line crosses not only the attractive but also
the repulsive spikes. In the first case (RDG = 0.3 isosurface), the low-density, low-
gradient region corresponds to the region between Au and Rn atom(s), indicative the
interaction region, the blue region clear shows the stronger attractive interaction
between Au and Rn. The RDG = 0.5 isosurface clearly shows the steric repulsion
(Red annulus).
For n = 1 and 2 systems, the integrated charge transfer and considerable qBCP
show clear evidence of covalent character, the Laplacian values are trivial, and the
interactions belong to the covalent type. In particular, the existence of the disynaptic
basin V(Rn2, Au1) enhances the covalent character. For n = 3–6 systems, the
positive Laplacian values of BCP do not reveal any strong covalent interactions, and
it falls into the intermediate type with the negative energy density. While electron
density deformation Dq(r), integrated charge transfer Q and NPA analysis clearly
show that there are considerable electron transferred from Rn atom(s) to the
interaction inter-nuclear region and around Au atom, taking the binding energy and
RDG analysis into account; it suggests that the interactions between the Au and Rn
of n = 3–6 systems fall into intermediate interaction type with a pronounced
covalent character.
Conclusion
Investigations of the AuRnn2? (n = 1–6) series at the CCSD(T) theoretical level
with extended basis sets provide reliable structures and stabilities as well as insights
into its nature of interaction mechanism. The Au2? valence states prefer linear
coordination and the stable structures are of D?h, C2v, D4h, C4v and D4h for
n = 2–6, respectively. The average binding energies clearly show that the n = 1
and 2 systems are more stable than its neighbors.
The NBO analysis shows the r-bond in all the systems, and the p-bonds were
found in the n = 2 system. Topological analysis on electron density properties
(Laplacian values, energy density electron density deformation analysis, integrated
charge transfer Q, BCP properties, ELF, RDG) clearly show that the interactions of
n = 1 and 2 systems belong to the covalent type and those of n = 3–6 systems
prefer the intermediate type with pronounced covalent character.
Acknowledgments Supports from the Program for Innovative Research Team (in Science and
Technology) in University of Henan Province (No. 13IRTSTHN017) and Projects for Youth Key Teacher
by Henan Province (No. 2011GGJS-029) are gratefully acknowledged.
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