emergent or otherwise? cmsc/biol 361 emergence 1/22/08

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Emergent or Emergent or Otherwise? Otherwise? CMSC/BIOL 361 Emergence CMSC/BIOL 361 Emergence 1/22/08 1/22/08

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Page 1: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

Emergent or Otherwise?Emergent or Otherwise?

CMSC/BIOL 361 EmergenceCMSC/BIOL 361 Emergence

1/22/081/22/08

Page 2: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

(From Goldstein 1999)

Page 3: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

ViscosityViscosity

(From www.chemistryexplained.com/Kr-Ma/Liquids.html)

Page 4: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

Möbius StripMöbius Strip

(From Barrow 2007)

(From Polthier 2003)

Page 5: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

ClimateClimate

(From http://scijinks.jpl.nasa.gov/en/educators/gallery/oceans/NinoNina_L.jpg)

Page 6: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

TornadoTornado

Page 7: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

EarthquakesEarthquakes

(from the TERASHAKE simulation)

Page 8: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

NetworksNetworks

(From http://www-personal.umich.edu/~mejn/networks/)

Page 9: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

The World Wide WebThe World Wide Web

(From Barrow 2007)

Page 10: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

Food WebsFood Webs

Page 11: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

The BrainThe Brain

(From www.alz.org)

Page 12: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

Brownian MotionBrownian Motion

Page 13: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

FractalsFractals

Page 14: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

AllotropesAllotropesDiamond Graphite Lonsdaleite

Buckyball Fullerines

Amorphous Nanotube

Page 15: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

Chemical CompoundsChemical Compounds

(from Wikipedia)

Page 16: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

MineralsMinerals

Page 17: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

ProteinsProteins

N

O H

RH

N

O H

R H

N

O H

RH

N

O H

R H

N

OH

R H

N

OH

R H

N

OH

R H

N

OH

R H

Side chain

H-bond

Backbone

Amino acid

Proteins consist of a long chain ofamino acids, the primary structure

Page 18: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

ProteinsProteinsThe constituent amino acids may encourage hydrogen bonding that form regular structures, called secondary structures

The secondary structures fold together to form a compact 3-dimensional shape, called the tertiary structure

-helix -sheet

Page 19: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

ProteinsProteins

(From http://www.lbl.gov/Publications/Currents/Archive/Apr-01-2005.html)

Page 20: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

CellsCells

Page 21: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

FlockingFlocking

Page 22: Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

EmergentEmergentNon-linearNon-linear

CoherentCoherent

DynamicDynamic

Self-OrganizationSelf-Organization

ComplexityComplexity

Collective BehaviorCollective Behavior

UnexpectedUnexpected

UnpredictableUnpredictable

CommunitiesCommunities