epitope mapping and characterization of a neutralizing monoclonal antibody against human adenovirus...

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Accepted Manuscript Title: Epitope mapping and characterization of a neutralizing monoclonal antibody against human adenovirus type 3 Author: Xingui Tian Chenyang Li Chunyan Xue Xiao Li Zhichao Zhou Rong Zhou PII: S0168-1702(13)00292-X DOI: http://dx.doi.org/doi:10.1016/j.virusres.2013.08.013 Reference: VIRUS 96056 To appear in: Virus Research Received date: 4-7-2013 Revised date: 28-8-2013 Accepted date: 29-8-2013 Please cite this article as: Tian, X., Li, C., Xue, C., Li, X., Zhou, Z., Zhou, R., Epitope mapping and characterization of a neutralizing monoclonal antibody against human adenovirus type 3, Virus Research (2013), http://dx.doi.org/10.1016/j.virusres.2013.08.013 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain.

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Accepted Manuscript

Title: Epitope mapping and characterization of a neutralizingmonoclonal antibody against human adenovirus type 3

Author: Xingui Tian Chenyang Li Chunyan Xue Xiao LiZhichao Zhou Rong Zhou

PII: S0168-1702(13)00292-XDOI: http://dx.doi.org/doi:10.1016/j.virusres.2013.08.013Reference: VIRUS 96056

To appear in: Virus Research

Received date: 4-7-2013Revised date: 28-8-2013Accepted date: 29-8-2013

Please cite this article as: Tian, X., Li, C., Xue, C., Li, X., Zhou,Z., Zhou, R., Epitope mapping and characterization of a neutralizingmonoclonal antibody against human adenovirus type 3, Virus Research (2013),http://dx.doi.org/10.1016/j.virusres.2013.08.013

This is a PDF file of an unedited manuscript that has been accepted for publication.As a service to our customers we are providing this early version of the manuscript.The manuscript will undergo copyediting, typesetting, and review of the resulting proofbefore it is published in its final form. Please note that during the production processerrors may be discovered which could affect the content, and all legal disclaimers thatapply to the journal pertain.

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Epitope mapping and characterization of a neutralizing monoclonal 1

antibody against human adenovirus type 32

3

Xingui Tian, Chenyang Li, Chunyan Xue, Xiao Li, Zhichao Zhou, Rong Zhou*4

State Key Lab of Respiratory Disease, Guangzhou Institute of Respiratory Disease, The5

First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China6

7

*Corresponding author: Dr Zhou, State Key Lab of Respiratory Disease, The First 8

Affiliated Hospital of Guangzhou Medical University, 151 Yan Jiang Road, 9

Guangzhou 510120, China. Phone: +86 20 34281614. Fax: +86 20 34281614. Email: 10

[email protected]

E-mail addresses: [email protected] (X. Tian), [email protected] (C. Li), 12

[email protected] (C. Xue), [email protected] (X. Li), [email protected] (Z. Zhou), 13

[email protected] (R. Zhou)14

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Abstract15

Human adenovirus serotype 3 (HAdV-3) has occurred as a global epidemic in recent 16

years causing serious diseases such as pneumonia in pediatric and adult patients.17

Development of reliable diagnostic reagents and identification of neutralizing epitopes18

is important for the surveillance and control of infection. In this study, a neutralizing 19

monoclonal antibody (MAb) MAb 1B6 was generated using the HAdV-3 virion. MAb 20

1B6 specially recognized the HAdV-3 virus particles and the HAdV-3 hexon protein, 21

but not the virus particles or the hexon protein of HAdV-7 and HAdV-4 by western-blot 22

analysis and indirect enzyme-linked immunosorbent assay (ELISA). Analysis using a23

series of peptides from the hexon protein and chimeric adenovirus (Ad) particles of 24

epitope mutants revealed that MAb 1B6 bound to the exposed region (amino acid 25

positions 414-424 of hexon) in hypervariable region 7 (HVR7). ELISA demonstrated 26

that MAb 1B6 could recognize the corresponding regions of other HAdV-3 genotypes 27

that have some residues substituted. The identification of the neutralizing epitope and 28

the generation of MAb 1B6 may be useful for clinical serotype-specific diagnosis, 29

subunit vaccine construction for HAdV-3 infection, and virion structural analysis.30

31

Key words: human adenovirus type 3, neutralizing monoclonal antibody, epitope 32

identification33

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1. Introduction 34

Human adenoviruses (HAdV) belong to the Mastadenovirus genus and cause a broad 35

spectrum of diseases in pediatric and adult patients, including epidemic 36

keratoconjunctivitis, acute respiratory illnesses, and acute gastroenteritis (1, 2). To 37

date, 51 human adenovirus serotypes have been identified and classified into six groups 38

(A to F). HAdV species C (HAdV-1, -2, -5, and -6), species B (HAdV-3, -7, and -14) 39

and species E (HAdV-4) are most commonly found in patients with respiratory40

infection (3, 4). Among these, the major epidemic strains are HAdV-3 of subspecies B141

that have caused severe respiratory diseases, such as acute respiratory disease and lethal42

pneumonia epidemics and outbreaks in Asia, Europe, and America (5-10). 43

Currently, there is no effective medicine or vaccine against HAdV-3. Neutralizing 44

monoclonal antibodies (MAb) may be a promising prophylactic or therapeutic 45

medicine against virus disease. Neutralizing MAbs also could be useful for identifying 46

neutralizing epitopes, which is of great importance in the molecular design of vaccines. 47

For diagnosis and therapy, the typing of HAdV infection is valuable and essential 48

because of the numerous serotypes present. Thus, type-specific MAbs against HAdV-3 49

may be used to develop rapid and reliable immunological tests for HAdV-3 infection. 50

The adenovirus capsid is an icosahedron composed of three structural proteins: hexon, 51

penton base and fiber. The hexon protein is the major antigenic determinant (11). 52

Type-specific neutralizing epitopes of hexons have been proposed to reside within 53

seven high variable regions (HVRs) of the hexon, in which HVR7 could be further 54

subdivided into three highly variable regions (12). Our previous study demonstrated 55

that HVR1, 2, 5 and 7 regions of HAdV-3 containing neutralizing epitopes (13). 56

However, the HVR7 of HAdV-3 is long (30 amino acids) and requires further detailed 57

study. 58

To understand the neutralization epitopes of HAdV-3 better, we produced a 59

neutralizing MAb termed MAb 1B6 against the HAdV-3-gz01 viruses. Epitope 60

mapping revealed that MAb 1B6 recognized the HVR7 of HAdV-3 hexon. The data 61

show that MAb 1B6 cross-detected the HVR7s of other HAdV-3 strains but not 62

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HAdV-7 and HAdV-4. The findings of this study will be useful for the reliable and 63

stable serotype-specific diagnosis of adenovirus type 3 infection, and adenovirus 64

structural analysis.65

66

2. Methods and materials67

2.1 Virus strains and cells68

The following strains of adenoviruses used in this study were obtained as previously 69

described or maintained in our laboratory (11, 13): HAdV-3 GZ01 strain (GenBank 70

accession no. DQ099432), HAdV-4 GZ01 strain (GenBank accession no. KF006344), 71

HAdV-7 GZ08 strain (GenBank accession no. GQ478341), recombinant HAdV-5, 72

recombinant adenovirus Ad3EGFP encoding a HAdV-3 GZ-01 genome and enhanced 73

green fluorescent protein (eGFP) with an E3 region deletion, hexon chimeric 74

adenovirus rAd3egf/H7 with the hexon gene from HAdV-7 replacing the HAdV-3 75

hexon gene of the Ad3EGFP, and epitope mutants (rAdH7R1, rAdH7R2, rAdH7R3, 76

rAdH7R4) from rAd3egf/H7 replaced with corresponding HAdV-3 epitopes. All 77

adenoviruses were cultured in HEp-2 cells or AD293 cells. The cells were maintained 78

in Dulbecco’s modified Eagle’s medium (DMEM)(Gibco, USA) supplemented with 79

100 IU/ml penicillin, 100 mg/ml streptomycin, and 10% fetal bovine serum. 80

Adenovirus particles were purified by standard CsCl gradient centrifugation, as 81

previously described (14). The virus particle (VP) titers were determined by 82

spectrophotometry using a conversion factor of 1.1 × 1012 VPs per absorbance unit at 83

260 nm.84

85

2.2 Western blot analysis86

HAdV-3 virions were used to immunize BALB/c mice and screen MAbs. Production 87

and selection of mouse monoclonal antibodies against HAdV-3 were performed as 88

described previously (24). To analyze the reactivity of MAbs with the adenovirus 89

capsid proteins, total protein from purified adenoviruses was separated by 10% SDS 90

polyacrylamide gels. The proteins were transferred onto PVDF membranes using a wet 91

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blotter. The membranes were blocked with 5% skim-milk in phosphate buffered saline92

(PBS) and then incubated with the MAb at final dilutions of 1:10,000, washed and93

exposed to a 1:10,000 dilution of goat anti-mouse IgG (H+L)-horseradish peroxidase94

(HRP) conjugate affinity-purified secondary antibody (Bio-Rad, China). The blot was 95

developed using Immobilon Western chemiluminescence HRP substrate (Millipore, 96

USA).97

98

2.3 Virus neutralization test99

For in vitro adenovirus neutralization experiments, purified MAbs were serially diluted 100

2-fold in DMEM, and 50 µl aliquots of each dilution were mixed with 50 µl 101

recombinant adenoviruses (Ad3EGFP or rAd3egf/H7) with 2 × 105 VPs. The 102

antibody-virus mixtures were incubated for 1 h at 37°C and then transferred to 96-well 103

plates containing 85–95% confluent monolayers of HEp-2 cells. Monolayers were104

cultured in RPMI Medium 1640 without phenol red (Gibco, USA) and serum for 72 h. 105

Infected cells were analyzed using a Varioskan Flash Multimode Reader (Thermo 106

Scientific) to measure the EGFP expression. Neutralizing titers were defined as the 107

minimum concentration of MAb that inhibited 90% of EGFP expression.108

109

2.4 Expression of recombinant protein fragments110

A pQE30 expression vector was used to express different serotype hexon peptides with 111

a hexahistidine (His) tag, and a pGEX-4T-3 vector was used to produce short peptides 112

(HVRs) with an N-terminal glutathione of S-transferase (GST) tag. The primers used 113

for cloning these fragments are shown in Table 1. Each primer contained an engineered 114

restriction enzyme site to facilitate the cloning. The three HIS fusion proteins were 115

purified by Ni-NTA beads affinity chromatography (Novagen, USA) according to the 116

manufacturer’s instructions, and the GST fusion peptides were purified by affinity 117

chromatography using GST-Bind Resin (Novagen, USA) under native conditions. The 118

control protein GST was purified under the same conditions.119

120

2.5 Indirect Enzyme-linked immunosorbent assay (ELISA) analysis121

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For ELISA, 96-well plates (Nunc Maxisorp) were coated overnight at 4°C with fusion 122

peptides (about 2 µg/ml) or virus particles (about 1010 VPs/ml) in PBS (pH 7.4) and 123

were washed one time with 0.05% Tween-20 in phosphate-buffered saline (PBST) and124

blocked for 2 h with 2% bovine serum albumin (BSA) in PBST. Then, 100 µl/well 125

MAb ascites was added to each well and incubated at a dilution of 1:5000 for 1 h at 126

37°C. The plates were washed three times with PBST and incubated for 1 h with a 127

1:10,000 dilution of goat anti-mouse IgG (H+L)-HRP conjugate affinity-purified 128

secondary antibody (Bio-Rad, China). After washing four times with PBST, the plates129

were developed with tetramethylbenzidine (TMB) substrate, stopped with 2M H2SO4, 130

and analyzed at 450 nm using an ELISA plate reader (Thermo Scientific Multiskan131

MK3).132

133

2.6 Peptide competition ELISA134

The epitope detected by MAb was confirmed by competitive inhibition ELISA. 135

Optimized concentrations of the MAbs were determined by serial dilution. Briefly, the 136

HAdV-3 GZ01 virions in PBS (pH 7.4) were used to coat 96-well plates overnight at137

4°C. In separate tubes, constant concentrations of MAb at a final dilution of 1:1000 138

were added to increasing concentrations of competitor peptide (0.1, 1, 10, or 100 139

µg/ml) in blocking buffer and incubated for 30 min at 37°C. The virion-coated plates 140

were washed one time with washing buffer and incubated with blocking buffer for 2 h 141

at 37°C. Then each of the MAb-peptide mixtures was added to duplicate wells, and the 142

plates were incubated for 1 h at 37°C. A control MAb in blocking buffer without 143

peptide was included in each plate. The subsequent processes were performed as 144

described for indirect ELISA (section 2.5). 145

146

2.7 Immunocytochemistry147

To test whether 1B6 could be used to detect adenovirus-infected cells, 148

immunocytochemistry was performed. Briefly, the AD293 cells were infected with 2 × 149

105 VP Ads in 24-well plates and were cultured for 2 days at 37°C. After removal of the 150

media, the plates were rinsed once with PBS, and immediately fixed with methanol 151

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containing 0.3% H2O2 for 5 min in a −20°C freezer. They were then blocked with 152

blocking buffer, goat sera (5%) in PBST for 1 h, with gentle rocking, and then cells 153

were incubated with MAb at a final dilution of 1:1000 in blocking buffer for 1 h at 154

37°C, washed and exposed to a 1:2000 dilution of goat anti-mouse IgG (H+L)-HRP 155

conjugate affinity-purified secondary antibody (Bio-Rad, China). The cells were 156

developed using DAB reagent and observed by microscopy.157

158

2.8 Statistical Analysis159

The data are presented as the mean ± standard error. Statistical significance was 160

determined using Prism 5.0 software. Comparisons among groups were performed by 161

ANOVA with Bonferroni’s test to account for multiple comparisons. P values of less 162

than 0.05 were considered statistically significant.163

3. Results164

3.1 Generation and identification of neutralizing MAb 1B6 directed against 165

HAdV-3 hexon166

Purified HAdV-3 GZ01 was used to immunize mice and a monoclonal IgG1 isotype 167

antibody, MAb 1B6, was obtained. The ascites fluid titer by ELISA was 160,000.168

ELISA analysis indicated that MAb 1B6 reacted with its parental antigen, whole 169

HAdV-3 GZ01 virus particles, which suggested the epitope recognized by MAb 1B6170

was presented on the surface of the virion. 171

Western blotting demonstrated that MAb 1B6 specifically detected the hexon protein 172

of the HAdV-3 GZ01 capsid (Fig. 1A), which was also confirmed by indirect-ELISA 173

using the truncated hexon peptide expressed in Escherichia coli (Fig. 1B). MAb 1B6 174

did not react with the HAdV-4 GZ01 or HAdV-7 GZ08 hexon (Fig. 1A and B), and 175

showed a lack of reactivity with the negative control (data not shown). 176

MAb 1B6 neutralized Ad3EGFP but not rAd3egf/H7, and the neutralizing titer of 177

MAb 1B6 was 10μg/ml (Fig. 1C). Immunocytochemistry analysis using MAb 1B6 178

specifically detected cells infected with HAdV-3 GZ01 virus, but not those infected 179

with HAdV-4 GZ01 or HAdV-7 GZ08 viruses (data not shown). Thus, the epitope 180

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recognized by MAb 1B6 was serotype 3-specific and located within the region of the 181

truncated hexon protein containing all 7 HVRs, which are thought to be continuous 182

based on their reactivity with the denatured protein and native virion.183

184

3.2 Mapping of the epitope recognized by MAb 1B6185

The hexon crystallographic and phylogenetic analysis revealed that seven 186

hypervariable regions (HVRs) might contain serotype-specific residues (21, 25). 187

Sequence alignment between the Ad3 and Ad7 hexon protein clearly demonstrated 188

variation of one or more amino acids in HVR-1, -2, -4, -5, -6 and -7, in which HVR7189

was further subdivided into three highly variable regions named HVR7s, HVR8 and 190

HVR9.191

To identify the region of the HAdV-3 hexon bound with MAb 1B6, we expressed 192

recombinant HVR peptides with GST tag. Indirect-ELISA revealed that MAb 1B6193

reacted with R7-GST and R7s-GST but not others (Fig. 2A), suggesting MAb 1B6194

recognized HVR7s of the hexon. To access the epitope on a native virion, we used a 195

previously constructed series of recombinant adenoviruses with chimeric hexon to react 196

with MAb 1B6 by indirect-ELISA. This analysis also confirmed HVR7 as the region 197

bound with MAb 1B6 (Fig. 2B). 198

Further peptide competitive inhibition ELISA was performed to demonstrate the 199

accuracy of the identified epitope for MAb 1B6. Increasing concentrations of peptides 200

were incubated with MAb 1B6. The R1-GST fragment was used as a negative control. 201

The mixtures were then assayed by ELISA with HAdV-3 virus particle-coated plates. 202

The fragments R7 and R7sn competed with virions for MAb 1B6 binding in a 203

dose-dependent manner, while the control peptide R1 did not. Higher concentrations of204

peptide R7s could partly compete with virions for MAb 1B6 binding compared with R7 205

(Fig. 2C). Thus, R7sn was the epitope recognized by MAb 1B6.206

207

3.3 Characterization of the identified epitope for MAb 1B6208

MAb 1B6 showed unique reactivity to the hexon of adenovirus serotype 3, therefore, it 209

is necessary to determine the distribution of the epitope among different groups/types 210

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of human adenovirus. Alignment of the hexon protein sequences available from 211

GenBank revealed that the epitope was unique for serotype 3 adenovirus (13), but212

global HAdV-3 strains showed amino acid substitutions in the region (Fig. 3A). Three 213

variants (M1 [GPGNRYQGIK], M2 [GPGHTYQGIK] and M3 [GPGHTFQGVK]) 214

that represented all variants from HAdV-3 strains were also constructed to detect the215

reactive range of MAb 1B6. ELISA demonstrated that MAb 1B6 bound to all the 216

variants, but not the control peptide of adenovirus serotype 7 (Fig. 3B). Therefore, 217

MAb 1B6 could be a useful tool for distinguishing human adenovirus serotype 3 from218

other adenoviruses. 219

220

4. Discussion221

In this study, we generated MAb 1B6, which neutralized HAdV-3 (Ad3EGFP) but not 222

HAdV-7 (rAd3egf/H7) and specifically detected the HAdV-3 hexon protein (Fig. 1). 223

Epitope mapping on HAdV-3 hexon revealed that MAb 1B6 recognized the exposed 224

region (amino acid positions 414-424 of the hexon) corresponding to the HVR7 (Fig. 225

2). 226

Hexon crystallographic and phylogenetic analysis revealed seven HVRs might contain 227

serotype-specific residues that are exposed to the capsid surface (15). However, to our 228

knowledge, among the 52 adenoviruses, few type-specific neutralization antibody 229

recognition sites have been identified (13, 16-19). In our previous study, we identified 230

HVR3 as the only epitope shared by HAdV-3 and HAdV-7 using MAb 5D4 (20).231

Although HVR7 of HAdV-3 is a neutralizing region, the precise neutralizing epitope 232

was not clear (13). In this paper, HVR7 was further subdivided into three fragments by 233

sequence alignment, of which HVR7sn (GPGHRYQGIK) was detected by the 234

neutralizing MAb 1B6 (Fig. 2B). The reactivity of MAb 1B6 with the peptide 235

“GPGHRYQG” was reduced, demonstrating that the amino acids “IK” affected MAb 236

1B6 binding (Fig. 2B). However, the epitope “GPGHRYQGIK” is not included in the 237

predicted neutralizing regions for HAdV-3 by homology modeling (18, 21). This 238

indicates the structural complexity of HAdV-3 HVR7, which may contain several 239

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neutralization epitopes. The HVR7sn also could be a candidate position for displaying 240

exogenous epitope (22). 241

MAb 1B6 detected and neutralized HAdV-3 but not HAdV-7 and HAdV-4 (Fig. 1), 242

therefore, it may be used to distinguish HAdV-3 from other serotype HAdVs. The 243

epitope was unique for HAdV-3. However, it is necessary to identify the distribution of 244

the epitope among HAdV-3 strains. Although the HAdV-3 genome is relatively stable 245

across time and geographic space, it still yields small-scale nucleotide variations (23). 246

Several studies found that the HAdV-3 hexon sequences showed a high heterogeneity 247

that affected HVRs and formed multiple genetic lineages (24-26). In these studies, the 248

amino acid changes were conserved among the genotypes, and the epitope 249

“GPGHRYQGIK” had three genotypes, “GPGHRYQGIK”, “GPGHTYQGIK” and 250

“GPGNRYQGIK” with only one substitution at position 147 H to N or at the position 251

148 R to T. This was in accordance with our result using globally known HAdV-3 252

hexon sequences from GenBank alignment. In recent years, a rare mutant with a 253

“GPGHTFQGVK” genotype was detected. Indirect-ELISA analysis demonstrated 254

reactivity of MAb 1B6 with the three variants was reduced but not abolished (Fig. 3B), 255

which suggested these substitutions may be tolerated.256

257

Acknowledgements258

This work was supported by the National Natural Science Foundation of China (NSFC, 259

31070150) and Guangdong and Macau Joint Center of Innovative Drugs for 260

Respiratory Pathogens (2010B091000018).261

262

Authors’ contributions263

TXG performed expression of recombinant protein fragments, ELISA analysis and 264

western blot assays, analyzed the data, and drafted the manuscript. LCY produced the 265

monoclonal antibody. XQY collected serum samples and performed some ELISA 266

analysis. LX and ZZC prepared the viruses particles. ZR designed and supervised the 267

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work, and edited the final version of this manuscript. All authors read and approved the 268

final version of the manuscript.269

270

Competing interests271

The authors declare that they have no competing interests.272

273

References274

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12. Rux, J.J., Kuser, P.R., Burnett, R.M., 2003. Structural and phylogenetic analysis of 308adenovirus hexons by use of high-resolution x-ray crystallographic, molecular 309modeling, and sequence-based methods. J Virol. 77(17), 9553-9566.31013. Qiu, H., Li, X., Tian, X., Zhou, Z., Xing, K., Li, H., Tang, N., Liu, W., Bai, P., 311Zhou, R., 2012. Serotype-specific neutralizing antibody epitopes of human adenovirus 312type 3 (HAdV-3) and HAdV-7 reside in multiple hexon hypervariable regions. J Virol. 31386(15), 7964-7975.31414. Wu, H., Dmitriev, I., Kashentseva, E., Seki, T., Wang, M., Curiel, D.T., 2002. 315Construction and characterization of adenovirus serotype 5 packaged by serotype 3 316hexon. J Virol. 76(24), 12775-12782.31715. Rux, J.J., Burnett, R.M., 2000. Type-specific epitope locations revealed by X-ray 318crystallographic study of adenovirus type 5 hexon. Mol Ther. 1(1), 18-30.31916. Bradley, R.R., Maxfield, L.F., Lynch, D.M., Iampietro, M.J., Borducchi, E.N., 320Barouch, D.H., 2012. Adenovirus serotype 5-specific neutralizing antibodies target 321multiple hexon hypervariable regions. J Virol. 86(2), 1267-1272.32217. Pichla-Gollon, S.L., Drinker, M., Zhou, X., Xue, F., Rux, J.J., Gao, G.P., Wilson, 323J.M., Ertl, H.C., Burnett, R.M., Bergelson, J.M., 2007. Structure-based identification of 324a major neutralizing site in an adenovirus hexon. J Virol. 81(4), 1680-1689.32518. Yuan, X., Qu, Z., Wu, X., Wang, Y., Liu, L., Wei, F., Gao, H., Shang, L., Zhang, 326H., Cui, H., Zhao, Y., Wu, N., Tang, Y., Qin, L., 2009. Molecular modeling and 327epitopes mapping of human adenovirus type 3 hexon protein. Vaccine. 27(37), 3285103-5110.32919. Toogood, C.I., Crompton, J., Hay, R.T., 1992. Antipeptide antisera define 330neutralizing epitopes on the adenovirus hexon. J Gen Virol. 73 (6), 1429-1435.33120. Qiu, H., Zhou, Z., Feng, K., Tian, X., Li, X., Li, H., Xing, K., Chen, J., Li, C., Zhou, 332R., 2009. Epitope mapping and cross-reactivity analysis of the monoclonal antibodies 333against hexon protein of human adenovirus type 3. Virus Res. 146(1-2), 58-65.33421. Yuan, X.H., Wang, Y.C., Jin, W.J., Zhao, B.B., Chen, C.F., Yang, J., Wang, J.F., 335Guo, Y.Y., Liu, J.J., Zhang, D., Gong, L.L., He, Y.W., 2012. Structure-based 336high-throughput epitope analysis of hexon proteins in B and C species human 337adenoviruses (HAdVs). PLoS One. 7(3), e32938.33822. Tian X, Su X, Li X, Li H, Li T, Zhou Z, et al. Protection against Enterovirus 71 with 339Neutralizing Epitope Incorporation within Adenovirus Type 3 Hexon. PLoS One. 3402012;7(7):e41381.34123. Mahadevan, P., Seto J., Tibbetts, C., Seto, D., 2010. Natural variants of human 342adenovirus type 3 provide evidence for relative genome stability across time and 343geographic space. Virology. 397(1), 113-118.34424. Choi, E.H., Kim, H.S., Park, K.H., Lee, H.J., 2006. Genetic heterogeneity of the 345hexon gene of adenovirus type 3 over a 9-year period in Korea. J Med Virol. 78(3), 346379-383.34725. Mizuta, K., Matsuzaki, Y., Hongo, S., Ohmi, A., Okamoto, M., Nishimura, H., 348Itagaki, T., Katsushima, N., Oshitani, H., Suzuki, A., Furuse, Y., Noda, M., Kimura, H., 349Ahiko, T., 2009. Stability of the seven hexon hypervariable region sequences of 350

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adenovirus types 1-6 isolated in Yamagata, Japan between 1988 and 2007. Virus Res. 351140(1-2), 32-39.35226. Biere, B., Schweiger, B., 2010. Human adenoviruses in respiratory infections: 353sequencing of the hexon hypervariable region reveals high sequence variability. J Clin 354Virol. 47(4), 366-371.355

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Table 1. Primers used for the production of recombinant truncated hexon proteins.356

aNumbers show the location of the His tag or GST-fused peptides in HAdV-3 hexon 357

protein.358

Restriction sites are underlined in the primer pairs used for PCR and cloning.359

Primer pairs without underlines were annealed to generate the cloned fragments.360

361

Clone Positiona Primer Oligonucleotide sequence (5' to 3')

pGEX-R1 136-146 R1-r ggccgcagttactgcattgtctcgattcgttgtaactatgg

R1-u aattccatagttacaacgaatcgagacaatgcagtaactgc

pGEX-R2 172-183 R2-r ggccgcaatgggcttttcttctccttcagtagtggtaatgtcgg

R2-u aattccgacattaccactactgaaggagaagaaaagcccattgc

pGEX-R4 244-254 R4-r ggccgcagtttcaacccctccttcggttgttggttttactttgg

R4-u aattccaaagtaaaaccaacaaccgaaggaggggttgaaactgc

pGEX-R5 265-278 R5-r ggccgcaatttcaggcgctaaagctcctgcaacagcatccctaccatcgg

R5-u aattccgatggtagggatgctgttgcaggagctttagcgcctgaaattgc

pGEX-R6 299-307 R6-r ggccgcatttgcatgagagttatcagacgttccgg

R6-u aattccggaacgtctgataactctcatgcaaatgc

pGEX-R7 414-443 R7-r cgatgcggccgcttcattagctgtatcaacattagc

R7-u cgtgaattccggaccagggcacaggtatcaag

pGEX-R7s 414-421 R7S-r ggccgcgccttgatacctgtgccctggtccgg

R7S-u aattccggaccagggcacaggtatcaaggcgc

pGEX-R7sn 414-423 R7Sn-r ggccgctttaatgccttgatacctgtgccctggtccgg

R7Sn-u aattccggaccagggcacaggtatcaaggcattaaagc

pGEX-R8 422-433 R8-r ggccgcttcccatccattagcgtcatcggttttaactttaatgg

R8-u aattccattaaagttaaaaccgatgacgctaatggatgggaagc

pGEX-R9 433-443 R9-r ggccgcttcattagctgtatcaacattagcatctttgg

R9-u aattccaaagatgctaatgttgatacagctaatgaagc

pQE-H 112-500 H-uSphI aaagcatgcagctttaagccctattccggcac

H-rSalI aaagtcgacttactcggccgttcatgtactcgtagg

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Figure legends361

Fig.1. Analysis of MAb 1B6 specific binding to HAdV-3 hexon. (A) Western-blot 362

indicated that MAb 1B6 reacted with the naive hexon protein of HAdV-3 but not 363

HAdV-4 and HAdV-7. Purified virions HAdV-3 (lane 1), HAdV-7 (lane 2) and 364

HAdV-4 (lane 3) were separated by SDS-PAGE and then transferred to nitro-cellulose 365

membranes and incubated with MAb 1B6. (B) ELISAs indicated that MAb 1B6 reacted 366

with the virus particles and recombinant truncated hexon fragments of HAdV-3 but not 367

HAdV-4 and HAdV-7. 96-well plates were coated with the purified naive virus 368

particles of HAdV-3, HAdV-4 and HAdV-7, and recombinant truncated hexon 369

fragments of HAdV-3, HAdV-4 and HAdV-7, and then reacted with MAb 1B6. Each 370

experiment was repeated independently at least three times, and the mean values and 371

standard deviations (indicated by the error bars) are shown. (C) In vitro neutralization 372

test indicated MAb 1B6 efficiently neutralized Ad3EGFP but not rAd3egf/H7. 373

374

Fig. 2. Identification of the epitope for MAb 1B6 by ELISA. (A) Epitope mapping was 375

performed by indirect-ELISA of MAb 1B6 with 7 HVRs fusion fragments R1 to R7. 376

The identified R7 peptide was further truncated and used for additional peptide 377

scanning. The location of the respective peptide in the hexon protein is shown in Table 378

1. (B) A series of recombinant adenovirus particles with chimeric hexons were reacted379

with MAb 1B6 by indirect-ELISA. (C) Peptide competition ELISA. Increasing 380

concentrations of the identified peptides R7s, R7sn, R7 or peptide R1 (as a negative 381

control) were pre-incubated with a constant concentration of MAb 1B6, which was then 382

used to detect HAdV-3 particles bound to microtiter plates. Each experiment was 383

repeated independently at least three times, and the mean values and standard 384

deviations (indicated by the error bars) are shown.385

386

Fig. 3. Reactivity of MAb 1B6 with GST-fused peptides from different HAdV-3 strains 387

by ELISA. (A) Sequence alignment of the epitope for MAb 1B6 in the hexon protein 388

from HAdV-3 strains available from GenBank. The following 4 peptides (R7sn, V2, 389

V3, V4) represented all known variants occurring in the HAdV-3 hexon from390

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GenBank. (B) Analysis of MAb 1B6 reactivity with GST-fused proteins R7sn, V2, V3, 391

V4 by indirect-ELISA. Recombinant HAdV-3 hexon fragment was used as a positive 392

control (H), and the GST-fused fragment Ad7R7 from the corresponding region of 393

HAdV-7 was used as a negative control (Ad7R7). Each experiment was repeated 394

independently at least three times, and the mean values and standard deviations 395

(indicated by the error bars) are shown.396

397

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Highlights397

We generated a neutralizing monoclonal antibody MAb 1B6398

MAb 1B6 specifically recognized HAdV3 but not other adenovirus serotypes399

MAb 1B6 recognized amino acid position 414-424 of the HAdV3 hexon400

The neutralization epitope is the first reported for HAdV3401

402

403