from natural diversity to better cultivars 10 january 2013 san diego, california
TRANSCRIPT
From Natural Diversityto Better Cultivars
10 January 2013San Diego, California
Evaluation of needs and priorities has been ongoing in the current RosBREED project: • Information of trait values from stakeholders
(Obj. 1 of RB1)
• Information of MAB breeding needs and opportunities from breeders (Obj. 5 of RB1)
• Input from Advisory Panel Members(Obj. 5 of RB1)
Direction from Feedback
Feedback Received
• Industry:Risks and opportunities indicate a need to broaden the scope of traits while making sure that fruit quality is still a top priority
• Breeders:MAB adoption has begun, but breeders need help (access to routine accurate genotyping services, genetic knowledge for other traits, implications of trait locus clusters, and knowledge of genotype × environment interaction)
Planning Activities in 2012
• Advisory Panel Members: recommendation to consider a second project
• U.S. Rosaceae Executive Committee: participation in conference calls and meetings
• U.S. Rosaceae breeders and interested colleagues: written input solicited, involved in planning process
• Planning group: developed Logic Model
• Planning group: identified scope, desired outcomes, and objectives
• Advisory Panel members: provide input on scope, desired outcomes, and objectivesTO
DAY
More rapid availability of new
cultivars with genetically superior
fruit quality
Improved profitability and sustainability of
U.S. rosaceous fruit, nut, and floral crops
with increased consumption and
enjoyment
RosBREED’s Long Term Outcomes
RosBREED Approach
Improve the efficiency and successof U.S. Rosaceae crop breeding programs
through the use of DNA diagnostic tests
RosBREED #2
IMPLEMENTATION
DISCOVERYPre-breeding
Post-breeding
Breeding
Plant diversity identified to
address risks & opportunities
Risks mitigated, opportunities
realized
Wild germplasm
Elite germplasm
Cultivar release & adoption
Objectives Structure
Obj. 1. Central breeding support
Obj. 2. New trait locus discovery
Obj. 3. Pre-breeding
Obj. 4. Post-breeding
Obj. 5. Communicate project outcomes & impacts
WA2
Which wild germplasm to use?
Which parents & combinations to create?
Which seedlings to progress?
Which selections to trial?
Which advanced selections to commercialize?
Supporting Breeding Decisions
Obj. 1: Central Breeding Support
Goal: Expand support tools Rosaceae-wide for efficient processing of new cultivar-generating plant populations addressing production and market risks and opportunities
Success: Valuable & superior new genetic combinations efficiently, accurately, rapidly, and creatively developed and identified; Massive complex breeding data managed efficiently for routine implementation of DNA-informed breeding
RosBREED #2
Demonstration Breeding Programs
Opportunities Addressed
• Advances in comparative genomics will allow for more efficient genetic discovery across crops
• A new statistical approach (Genome-wide selection) has potential to
increase the precision of marker-assisted breeding
• Advances by international groups/projectswill be leveraged
Challenges Addressed
• Access to accurate, cost effective genotyping services
• Database resources and tools to support MAB
• Polyploidy: definingfunctional alleles &
allele dosage
Obj. 2: New trait locus discovery
Goal: Ensure known trait loci are available for high-priority traits addressing production and market risks and opportunities
Success: All U.S. Rosaceae breeding programs have access to promising known trait loci addressing high value traits
WA2
Which wild germplasm to use?
Which parents & combinations to create?
Which seedlings to progress?
Which selections to trial?
Which advanced selections to commercialize?
Supporting Pre-Breeding Decisions
Obj. 3: Pre-breeding
Goal: Provide access to genepools of wild and novel germplasm for rosaceous crop breeders
Success: Valuable alleles from wild or novel germplasm are routinely identified and incorporated into cultivar-generating populations more efficiently, accurately, rapidlyand creatively
WA2
Which wild germplasm to use?
Which parents & combinations to create?
Which seedlings to progress?
Which selections to trial?
Which advanced selections to commercialize?
Supporting Post-Breeding Decisions
Obj. 4: Post-breeding
Goal: Enable and optimize use of DNA information for elite selection advancement and cultivar adoption decisions
Success: Breeders and industry sectors will make confident elite selection advancement and cultivar adoption decisions, thereby mitigating risks and realizing opportunities
Obj. 5: Communicate project outcomes and impacts
Goal: Communicated project outcomes and impacts to all stakeholders
Success: Breeders, allied scientists, industry sectors, and the public have an increased understanding of how genetics knowledge is being used to more efficiently and rapidly develop and commercialized new rosaceous cultivars that provide increased consumption, enjoyment, profitability, and sustainability
U.S.-Wide and Multi-Disciplinary
BREEDING
Genetics
Genomics
Bioinformatics
Computer Programming
Socio Economics
Evaluation
Communication
Technology Transfer
Plant Research International, NetherlandsEast Malling Research, UKCRA-FRU, Rome, ItalyIASMA, Trento, ItalyINRA (Bordeaux, Avignon, Angers), France
Andres Bello University, Chile Plant & Food Research, New Zealand
ARC, South Africa
RosBREED participant
location
International Collaborators
+ 2 Scientific Advisory Panel members (Spain, New Zealand)
AcknowledgementContributors to Logic Model
Cameron Peace Amy Iezzoni Robert ShuppNahla Bassil Sook Jung Eric van de WegRex Bernardo Jim Luby Gayle VolkMichael Coe Dorrie Main Vance WhitakerTom Davis Chris Maliepaard Chengyan YueKate Evans Vicki McCrackenGennaro Fazio Jim McFersonKarina Gallardo Jay NorelliKsenija Gasic Mercy OlmsteadCraig Hardner Brad Rickard
Advisory Panel Members
RosBREED I First Annual Meeting, 7-8 Jan 2010
RosBREED II Annual Advisory Panel Meeting, 13 Jan 2011
Thank you