growth and purification of human growth hormone...what is human growth hormone (hgh )? protein for...
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Growth and Purification of Human Growth Hormone
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Presenter Info:
Nathan Jones Cary, NC Senior Physics Major at North Carolina
State University
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What is Human Growth Hormone (hGH )?
Protein for pharmaceutical interest 191 Amino Acids Mw 22KD Alpha-helixes mostly Study stability in different environments Use neutron scattering
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Hard sphere fitting: estimate interaction peak
)()()()( 22 qSqPVVNqI p
ρ∆=
where
depends on particle shape
average structure factor:
d ~ λ/θ 1nm-1μm
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2)()( qFqP =
Small Angle Neutron Scattering
Q=(4π/λ)sin(θ/2)
Neutron Scattering
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10
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hydrogen deuterium nitrogen carbon oxygen
Cro
ss S
ecti
on (
in B
arns
) Scattering Cross Sections
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Working at IBBR and BL2
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The Process
Making a plasmid Grow cells Express the protein Lysing the cells ◦ Unfolding and Refolding
Purifying protein
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Making the Plasmid •Gh2 gene •2.1 kb •Replicates at single position
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Cell Growth
•Inoculate 50 mL LB 50 μL Ampicillin (AMP) and 100 μL Chloramphenical media with 200 μL E. Coli cells •Let cells grow to an OD of roughly 3 and inoculate in larger 1.5 L of LB •Why 3?
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Spectrophotometry
Optical Density
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LB growth curves
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00.5
11.5
22.5
33.5
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0 5 10 15 20 25 30 35
OD
Time (in hrs)
OD growth 6/14
OD…
0
1
2
3
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0 1 2 3 3.5 4 4.5 5 5.5 6 6.5 7 7.5 8
OD
OD
100 mL LB inoculated
100 mL LB inoculated into 1.5 L LB
OD Standardization
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0
1
2
3
4
5
6
0 1 2 3 4 5 6 7 8
OD
Time (in hrs)
Left Induction Curve 6-15
Todd's
Induced
Other
Induced
-1
0
1
2
3
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0 1 2 3 4 5 6 7 8
OD
Time (in hrs)
Right Induction Curve 6-15
Todd's
Induced
Other
Induced
100 mL LB inoculated into 2 X 1.5 L LB
Protein Expression
Isopropyl β-D-1-thiogalactopyranoside
Viral promoter that allows for expression of genes
Not metabolized by cell
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IPTG
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0.5
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1.5
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2.5
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3.5
0 5 10 15 20 25 30
OD
Time (in hrs)
Induction Curve 6/14
100 mL LB inoculated into 1.5 L LB
IPTG Induction
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0
0.05
0.1
0.15
0.2
0.25
0.3
50μM .1 mM 1 mM Sample1 Sample2 Sample3 Sample4 Sample5 Sample6
Con
c. In
mg/
ml
Sample name
Protein Concentrations
Series1
Sample1 Normal M9 media Sample2 M9 media + 2X Glucose Sample3 M9 media + 2X Thiamine Sample4 M9 media +2X Glucose + 2X Thiamine Sample5 M9 media + 3X Glucose Sample6 M9 media + 5X Glucose
50 μM
50 μM IPTG concentration
.1 mM
.1 mM IPTG concentration
1 mM
1 mM IPTG concentration
Protein Purification
Cell lyse ◦ Sonication ◦ French Press ◦ Chemical Lysing
Unfolding/ Refolding ◦ High urea and cysteine ◦ Low urea and more cysteine
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Protein Purification-1
B-Per ◦ Bacterial Protein Extraction Reagents
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Protein Purification-2
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Different chromatography columns Ion exchange column (IEX) Hydrophobic column (HIC) Size exclusion column
Characterization
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SDS-PAGE
•Separates proteins by molecular weight •Applies negative charge to each protein by mass. •Tracking dye added.
Where the protein is?
1: LB/ Bper/s
2: LB/ B-per/p
3: M
4: Enriched /B-per/s 5: Enriched /B-per/p
7: hGH 0.25mg/ml 8: hGH 0.5 mg/ml 9: hGH 1 mg/ml 10: hGH 2 mg/ml
4 5 6 7 8 9 10 1 2 3
M9 Optimization
Be able to have labeled protein for neutron scattering
Slower growth rates than other media Contains: ◦ Na2HPO4
◦ KH2PO4
◦ NaCl ◦ NH4Cl ◦ 1M MgSO4
◦ 1M CaCl2
◦ 20% Glucose
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To enrich: •1% Thiamine hydrochloride •1.38 mg/ml FeCl2
Growth
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OD-1 Normal M9 media
OD-2 M9 media + 2X Glucose
OD-3 M9 media + 4X Glucose
OD-4 M9 media +2X Glucose+ 2X Vitamins
Inoculated 50 ml M9 with 10 ml LB
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1
2
3
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0 5 10 15 20 25 30 35
OD
Time (hrs)
M9 OD Growth
OD-1
OD-2
OD-3
OD-4
Protein Expression
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Sample1 Normal M9 media
Sample2 M9 media + 2X Glucose
Sample3 M9 media + 4X Glucose
Sample4 M9 media +2X Glucose + 2X Vitamins
-0.2
0
0.2
0.4
0.6
0.8
1
1.2
0 1 2 3 4 5 6 7
Con
cent
rati
on (
mg/
ml)
Time (hrs)
Protein Concentration
Sample1
Sample2
Sample3
Sample4
Inoculated 50 ml M9 with 10 ml LB
M9 media
4 5 6 7 8 9 10 1 2 3
1: hGH 1.3 mg/ml 2: M 3: 1-Bper/P 4: 2-Bper/P 5: 3-Bper/P 6: 4-Bper/P 7: 1-Bper/s 8: 2-Bper/s 9: 3-Bper/s 10: 4-Bper/s
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Sample1 Normal M9 media
Sample2 M9 media + 2X Glucose
Sample3 M9 media + 4X Glucose
Sample4 M9 media +2X Glucose + 2X Vitamins
Where the protein is And which media to choose!
1 2 4 | 1 2 4 | M | hGH
Supernatant | pellet | Marker | purified hGH
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1 M9 media +2X Glucose+ 2X vitamins+2.5% glycerol
2 M9 media+ different inoculants
4 M9 media+2X Glucose+ 2X vitamins
0
0.2
0.4
0.6
0.8
1
1.2
1.4
1.6
1.8
1s 1p 2s 2p 4s 4p
Con
c. (
mg/
ml)
Sample
Protein Concentration
Further Research
Use of D2O for growth and optimization Continued optimization Protein decay improvements SANS of hGH and d-hGH in different
pharmaceutical relevant formulations
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Acknowledgements
•NIST •Julie Borchers
•SURF Program
•Sheila Khodadadi
•IBBR •Todd Hoopes
•John Marino
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IXC (1)
1: B10 2: B12 3: C2 4: C4 5: C6 6: M 7: E8 8: E10 9: Refolding (2 day old) 10: hGH 0.5 mg/ml
Pooled B8-B12 4 5 6 7 8 9 10 1 2 3
IXC (2)
10: Load 9: Wash 8: M 7: A8 6: A10 5: A12 4: B2 3: B4 2: B6 1: B8
4 5 6 7 8 9 10 1 2 3
HIC (1)
1: Load 2: P-column (after 1 day) 3: Wash 4: M 5: A2 6: A10 7: B1 8: B4 9: B6 10: B8
4 5 6 7 8 9 10 1 2 3
HIC (2)
1: M 2: B10 3: B12 4: C1 5: X1 6: X2 7: Q- column (after 3 days) 8: spill!! 9: Std/ 0.3 mg/ml 10: Std/ 0.6 mg/ml
Pooled B8-B12
4 5 6 7 8 9 10 1 2 3