heritability – “the fraction of the total variation in a trait that is due to variation in...
TRANSCRIPT
Heritability – “the fraction of the total variation in a trait that is due to variation in genes.” (Freeman and Herron, 2007)
Vp – the total variance in the phenotypic trait of a population.
Typically, this variation is considered as the phenotypic variation.
VP = VG + VE
VG = Genetic variationVE = Environmental variation
Broad Sense Heritability h2 or H2
The problem? VG represents all of the genetic variation as a single value.
Real genetic variation is complicated.
VA = additive genetic varianceVD = dominance genetic varianceVI = variance due to epistatic interactions
Additive Variation –VA
• Important because it is why relatives resemble each other.
• Alleles act independently.• The phenotype of an organism is the sum of the
effect of each allele, hence additive. • Additive alleles are not affected by the presence of
other alleles.• The effect of additive alleles allow biologists to follow
evolution in a predictable way.
Additive Variation –VA
A1 = 0.5, A2 = 0.5
Note: The best fit line (far right) explains all of the genetic variation. VG = VA.
Dominance Variation –VD
• The addition of alleles is not additive.• Dominance is one type of variation where alleles interact
(between sister alleles on other chromosome). • The effect of an allele depends upon what it is paired with. • Because of this dependence, the outcome of dominance
variation is not entirely predictable - it is context dependent.
• This context disappears every generation because of meiosis. The pairing of an allele with a sister allele on another chromosome in forming a zygote is unpredictable.
• Because of this , the effects of dominance variation change every generation, and are not predictable.
Dominance Variation –VD
A1 = 0.5, A2 = 0.5
Note: Adding a second copy of A2 does not change the phenotype. The Dominance Variation (VD) does not explain all of the Genetic Variation (VG). VG = VA + VD
Epistatic Effects –VI
• The effect of an allele at a locus is dependent the presence of an allele at another locus.
• The phenotype is dependent upon the allele at one locus interacting with an allele at another locus. Not a predictable outcome.
• Allele X may affect the phenotype one way in the presence of allele A, and affect the phenotype another way in the presence of allele B.
• Because of this dependence, the outcome of epistasis is not entirely predictable - it is context dependent.
• This context disappears every generation because of meiosis. When chromosomes independently assort and recombine, the pairings of alleles change.
• Because of this , the effects of epistasis change every generation, and are not predictable.
Narrow-Sense Heritability h2 or H2
In determining heritability, only narrow-sense heritability is used, because only the variation due to additive effects permits predictions due to selection.