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High-Throughput Screening Speeding Up CF Drug Discovery >10,000 Primary assays/day High- throughput screening CFTR Modulator Drug SAR based Medicinal Chemistry Prioritize hits Screening Assay Courtesy of Vertex Pharmaceuticals

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Page 1: High-Throughput Screening Speeding Up CF Drug Discovery >10,000 Primary assays/day High-throughput screening CFTR Modulator Drug SAR based Medicinal Chemistry

High-Throughput Screening Speeding Up CF Drug Discovery

>10,000 Primary assays/day

High-throughput screening

High-throughput screening

CFTR Modulator Drug

SAR based Medicinal Chemistry

Prioritize hitsPrioritize hits

Screening Assay

Courtesy of Vertex Pharmaceuticals

Page 2: High-Throughput Screening Speeding Up CF Drug Discovery >10,000 Primary assays/day High-throughput screening CFTR Modulator Drug SAR based Medicinal Chemistry

VX-770 Phase III Study Design

• Randomized, double-blind, placebo-controlled • Recruitment: 161 subjects• Key inclusion criteria

– G551D mutation on at least one CFTR allele– Aged ≥ 12 years– FEV1 40% to 90% predicted

Run-inScreening

Randomization(1:1)

Or 2-yr Follow-up

VX-770 150 mg q12h

Open-label rollover study

Placebo Placebo

Day -35 -14 0 48Week 24

VX-770 150 mg q12h

VX-770 150 mg q12h

Treatment period Extension period

Primary analysis

Elborn JS, 34th ECFC 2011http://clinicaltrials.gov (NCT00909532)

Page 3: High-Throughput Screening Speeding Up CF Drug Discovery >10,000 Primary assays/day High-throughput screening CFTR Modulator Drug SAR based Medicinal Chemistry

Day 15 Week 8 Week 16 Week 24 Week 32 Week 40 Week 48-60

-55

-50

-45

-40

-35

-30

-25

-20

-15

-10

-5

0

5

PlaceboVX-770

Ch

ang

e in

sw

eat

chlo

rid

e co

nce

ntr

atio

nm

mo

l/L

(m

ea

n,

95

% C

I)

Change from Baseline in Sweat Chloride

Treatment effect through Week 24– 47.9 mmol/L

P < 0.0001

Treatment effect through Week 48– 48.1 mmol/L

P < 0.0001

Elborn JS, 34th ECFC 2011Vertex press release June 10, 2011

Page 4: High-Throughput Screening Speeding Up CF Drug Discovery >10,000 Primary assays/day High-throughput screening CFTR Modulator Drug SAR based Medicinal Chemistry

Day 15 Week 8 Week 16 Week 24 Week 32 Week 40 Week 48-5

0

5

10

15PlaceboVX-770

Ab

solu

te c

han

ge

in %

pre

dic

ted

FE

V 1(m

ea

n,

95

% C

I)Absolute Change in FEV1 % Predicted

Treatment effect through Week 24

+ 10.6 % P < 0.0001

Treatment effect through Week 48

+ 10.5 % P < 0.0001

Elborn JS, 34th ECFC 2011Vertex press release June 10, 2011

Page 5: High-Throughput Screening Speeding Up CF Drug Discovery >10,000 Primary assays/day High-throughput screening CFTR Modulator Drug SAR based Medicinal Chemistry

Time to First Pulmonary Exacerbation

Week 24 Hazard Ratio

0.40 P = 0.0016

Week 48 Hazard Ratio

0.46 P = 0.0012

0.78

0.51

0.67

0.41

0.0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

0.9

1.0

0 28 56 84 112 140 168 196 224 252 280 308 336 364

Hazard Ratio: 0.45 ( 0.28, 0.73) P=0.0012

PLACEBO VX-770Event-Free Rate At Week 48 0.41 0.67

PLACEBO VX-770Event-Free Rate At Week 48

Placebo

VX-770

Pro

por

tion

of e

ven

t-fr

ee s

ubje

cts

Study day

Modified Fuchs’ criteria

Elborn JS, 34th ECFC 2011Vertex press release June 10, 2011

Page 6: High-Throughput Screening Speeding Up CF Drug Discovery >10,000 Primary assays/day High-throughput screening CFTR Modulator Drug SAR based Medicinal Chemistry

Change from Baseline in CFQ-R Respiratory Domain

Day 15 Week 8 Week 16 Week 24 Week 32 Week 40 Week 48

-10

-8

-6

-4

-2

0

2

4

6

8

10

12

PlaceboVX-770C

han

ge

in C

FQ

-R r

esp

irat

ory

do

mai

np

oin

ts (

me

an,

95%

CI)

* MCID, minimal clinically important difference (Quittner et al 2009)

MCID = 4*

Treatment effect through Week 24

+ 8.1P < 0.0001

Treatment effect through Week 48

+ 8.6P < 0.0001

Elborn JS, 34th ECFC 2011;Vertex press release June 10, 2011

Page 7: High-Throughput Screening Speeding Up CF Drug Discovery >10,000 Primary assays/day High-throughput screening CFTR Modulator Drug SAR based Medicinal Chemistry

Change from Baseline in Weight

Day 15 Week 8 Week 16 Week 24 Week 32 Week 40 Week 48

-1

0

1

2

3

4

5PlaceboVX-770

Ch

ang

e in

we

igh

tkg

(m

ea

n,

95%

CI)

Treatment effect at Week 24+ 2.8 kg

P < 0.0001

Treatment effect at Week 48+ 2.7 kg

P = 0.0001

Elborn JS, 34th ECFC 2011Vertex press release June 10, 2011See talk by M Drumm: S1 (Thursday 2:00 PM)

Page 8: High-Throughput Screening Speeding Up CF Drug Discovery >10,000 Primary assays/day High-throughput screening CFTR Modulator Drug SAR based Medicinal Chemistry

Summary of VX-770 Phase III Study in CF Patients with the G551D Mutation• Rapid onset and sustained improvement in lung function

(primary endpoint: absolute change in % predicted FEV1)

• Parallel improvement in CFTR function and lung function

• Sustained improvements in other outcomes including risk of exacerbation, respiratory symptoms and weight gain

• No important safety concerns

• KALYDECO was approved by the FDA on January 31, 2012 for patients with CF who are 6 years of age and older and who have a G551D mutation

For more information on other VX-770 studies, see posters by R Ahrens, E McKone & P Flume: #s 203, 204 & 206, respectively

Page 9: High-Throughput Screening Speeding Up CF Drug Discovery >10,000 Primary assays/day High-throughput screening CFTR Modulator Drug SAR based Medicinal Chemistry

5 Classes of CFTR Mutations

IDefective

Production

IIDefective

Processing

IIIDefective

Regulation

IVDefective

Conductance

VReducedAmounts

G542XR553XW1282X

F508del G551DN1303K

R117HR334W

3849+10kbC>T3272-26A>G

CFTR is made& in properLocation, butDoes not functionnormally

Page 10: High-Throughput Screening Speeding Up CF Drug Discovery >10,000 Primary assays/day High-throughput screening CFTR Modulator Drug SAR based Medicinal Chemistry

2011 Clinical Studies with CFTR Modulators

Rowe SM et al., New Engl J Med 2005

CFTR potentiator VX-770:Phase III study in CF patients with the G551D CFTR mutation

CFTR corrector VX-809:Phase IIa study in CF patients with the F508 CFTR mutation