innovations in parasite research · 2018-02-15 · gastrointestinal parasites •haemonchus...
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Joan M BurkeResearch Animal Scientist
USDA, ARS, Dale Bumpers Small Farms Research Center
Booneville, AR
Innovations in Parasite Research
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Dale Bumpers Small
Farms Research Center
Mission: To develop
scientific principles and
technologies to
enhance the
profitability of small
scale farms.
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Gastrointestinal Parasites• Haemonchus contortus or barber pole worm is the most
pathogenic, and thrives in warm, humid climates. Others include Trichostrongylus spp., Teladorsagia circumcincta; Cooperia, Oesophagostomum, Trichuris and Nematodirusare less pathogenic.
• One of greatest health issues, causing anemia, reduced weight gains, poor performance, and death.
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Gastrointestinal Parasites
• Haemonchus contortus present in most states and Canada, and survives winter conditions in northern states.
• Widespread anthelmintic resistance
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Current RecommendationsAmerican Consortium for Small Ruminant Parasite Control
(www.wormx.info)
• Selective treatment with anthelmintics – use 3-way combination
• Copper oxide wire particles – specific for H. contortus; combined with dewormer increases efficacy.
• Underlying strategy relies on anthelmintics failing many farmers, causing them to exit industry.
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Parasite Control
• Condensed tannin rich forages, fresh or dried – reduces
fecundity of worms, but not always effective, trace
mineral deficiency, reduced efficacy of ivermectin.
• Feedlot or avoidance; cut and carry.
• Grazing management.
Credit:Dean Avril, Ministries of Agriculture and Fisheries
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Year
FE
CR
, %
0
20
40
60
80
100
2008 2009 2010 2011 2012 2013 2015 2016
32
39
28
38
36
26 67
34
FEC reduction of goats entered into Western MD Pasture-based Meat Goat Performance Test
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FEC reduction of goats entered into Oklahoma Forage Based Meat Goat Buck Test
Year
FE
CR
, %
0
20
40
60
80
100
2014 2015 2016 2017
39
18
37
43
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GIN in check
Nutrition
Grazing
Biology of animal/
GIN
Stress
Genetics
Climate/
Environment
Chemical Control/COWP
System of Parasite Control
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Environmental factors that influence GI
infection
• Rainfall, humidity, temperature
• Season
• Management
• Stocking rate
• Nutrition/body condition
• Sex
• Stress
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Day of age/Month
90 120 150 180 210
Fecal
eg
g c
ou
nts
(eg
gs/g
)
0
1000
2000
3000
4000
Winter born
Fall born
AprJan
MayFeb
JunMar
JulApr
AugMay
Day of age/Month
90 120 150 180 210
Pa
cke
d c
ell
vo
lum
e (
%)
22
24
26
28
30
32
34
Winter born
Fall born
AprJan
MayFeb
JunMar
JulApr
AugMay
Effect of season of birth on GI infection
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Most worm transmission occurs during the peri-parturient period.
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Body condition of the dam, litter size, and age will influence her performance and worm
egg output, as well as the lamb’s.
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Changes in dam FEC during PPR(Notter, Burke, et al., 2017)
Days postpartum
-20 0 20 40 60 80
FE
C, eg
gs/
g
0
100
200
300
400
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Lamb age, d
30 50 70 90 110 130 150
FE
C, eg
gs/
g
0
200
400
600
800
1000
1200
Changes in lamb FEC with age(Notter, Burke, et al., 2017)
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Mandonnet et al., 2001, JAS 79:7
• Relationshipbetween FEC and sire effect – more significant as infection increased.
• Heritability as high as 0.37, but not in U.S.
Parasite resistance in goats
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Parasite resistance in sheepHeritability as high as 0.5, but likely lower
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Tools for Selection
• Performance tests
• NSIP – provides predictable, economically important genetic evaluation information to the American sheep industry by converting performance records into relevant decision-making tools.
• EBVs – estimated breeding values; inherited genetic potential from sire and dam.
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Using NSIP to select for parasite resistance
• NSIP allows recording of FEC at 3 different ages:
• Weaning (42 to 90 d)
• Postweaning (90 to 150 d)
• Yearling/adult
• Weaning FEC are generally collected at the time the lambs are first dewormed, but is influenced by anthelmintic resistance and use.
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FEC and PCV of offspring sired by Katahdin rams A or B (Year 2004, 2005) at 120 d of age (Burke & Miller, 2008
Vet. Parasitol. 153, 85)
Year
2004 2005
FE
C,
eg
gs
/g
0
2000
4000
6000
8000
10000
12000
Ram B
Ram A
Year
2004 2005
PC
V,
%
15
20
25
30
35
40
Ram B:
WWEC = +178
PWEC = +119
Ram A:
WWEC = -21
PWEC = -3
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The effect of sire's PFEC EBV on PCV of offspring at 120 d
PFEC
-100 0 100 200 300
PC
V, %
20
21
22
23
24
25
26
27
y = (25.2 – 0.67) – 0.016x
P < 0.001
(twin ram)
• Similar relationship at 90 d of age (P < 0.02)
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The effect of sire's PFEC EBV on FAMACHA of offspring at 120 d
PFEC
-100 0 100 200 300
FA
MA
CH
A
3.1
3.2
3.3
3.4
3.5
3.6
3.7
3.8
3.9
y = (3.42 – 0.04) + 0.0016x
P < 0.001
(twin ram)
• Similar relationship at 90 d of age (P < 0.001)
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Parasite resistance in sheep
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Genetic trends for other traits
WWT PWWT
MWWTNLW
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Points to consider
• For some traits, there are some slight antagonisms with FEC, but likely not to cause disruptions in breeding goals.
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Variable
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
BWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT 0.150.53 0.45 0.10 0.25 0.16 0.12 -0.10 0.01
WWT0.44
0.160.85 -0.29 0.10 0.18 0.07 0.08 0.04
PWWT0.37 0.81
0.20-0.38 0.01 0.20 0.11 -0.03 0.29
WFEC0.01 -0.07 -0.10
0.190.82 0.27 0.32 0.56 0.77
PWFEC0.07 -0.01 -0.02 0.29
0.240.38 0.40 0.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06
0.090.88 0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74
0.060.14 0.14
PPR0-0.03 -0.02 -0.13 0.15 0.16 0.02 0.02
0.350.96
PPR300.00 0.00 -0.06 0.19 0.19 0.02 0.02 0.46
0.24
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Variable
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
BWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT0.15 0.53 0.45 0.10 0.25 0.16 0.12
-0.10 0.01
WWT0.44 0.16 0.85 -0.29 0.10 0.18 0.07
0.08 0.04
PWWT0.37 0.81 0.20 -0.38 0.01 0.20 0.11
-0.03 0.29
WFEC0.01 -0.07 -0.10 0.19 0.82 0.27 0.32 0.56 0.77
PWFEC0.07 -0.01 -0.02 0.29 0.24 0.38 0.40 0.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06 0.09 0.88 0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74 0.06 0.14 0.14
PPR0-0.03 -0.02 -0.13 0.15 0.16 0.02 0.02 0.35 0.96
PPR300.00 0.00 -0.06 0.19 0.19 0.02 0.02 0.46 0.24
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Variable
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
BWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT0.15 0.53 0.45 0.10 0.25
0.16 0.12-0.10 0.01
WWT0.44 0.16 0.85 -0.29 0.10
0.18 0.070.08 0.04
PWWT0.37 0.81 0.20 -0.38 0.01
0.20 0.11-0.03 0.29
WFEC0.01 -0.07 -0.10 0.19 0.82 0.27 0.32 0.56 0.77
PWFEC0.07 -0.01 -0.02 0.29 0.24 0.38 0.40 0.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06 0.09 0.88 0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74 0.06 0.14 0.14
PPR0-0.03 -0.02 -0.13 0.15 0.16 0.02 0.02 0.35 0.96
PPR300.00 0.00 -0.06 0.19 0.19 0.02 0.02 0.46 0.24
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Variable
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
BWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT0.15 0.53 0.45 0.10 0.25 0.16 0.12 -0.10 0.01
WWT0.44 0.16 0.85
-0.29 0.100.18 0.07 0.08 0.04
PWWT0.37 0.81 0.20
-0.38 0.010.20 0.11 -0.03 0.29
WFEC0.01 -0.07 -0.10 0.19 0.82 0.27 0.32 0.56 0.77
PWFEC0.07 -0.01 -0.02 0.29 0.24 0.38 0.40 0.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06 0.09 0.88 0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74 0.06 0.14 0.14
PPR0-0.03 -0.02 -0.13 0.15 0.16 0.02 0.02 0.35 0.96
PPR300.00 0.00 -0.06 0.19 0.19 0.02 0.02 0.46 0.24
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Variable
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
BWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT0.15 0.53 0.45 0.10 0.25 0.16 0.12 -0.10 0.01
WWT0.44 0.16 0.85 -0.29 0.10 0.18 0.07 0.08 0.04
PWWT0.37 0.81 0.20 -0.38 0.01 0.20 0.11 -0.03 0.29
WFEC0.01 -0.07 -0.10 0.19
0.820.27 0.32 0.56 0.77
PWFEC0.07 -0.01 -0.02 0.29 0.24 0.38 0.40 0.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06 0.09 0.88 0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74 0.06 0.14 0.14
PPR0-0.03 -0.02 -0.13 0.15 0.16 0.02 0.02 0.35 0.96
PPR300.00 0.00 -0.06 0.19 0.19 0.02 0.02 0.46 0.24
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Variable
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
BWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT0.15 0.53 0.45 0.10 0.25 0.16 0.12 -0.10 0.01
WWT0.44 0.16 0.85 -0.29 0.10 0.18 0.07 0.08 0.04
PWWT0.37 0.81 0.20 -0.38 0.01 0.20 0.11 -0.03 0.29
WFEC0.01 -0.07 -0.10 0.19 0.82
0.27 0.320.56 0.77
PWFEC0.07 -0.01 -0.02 0.29 0.24
0.38 0.400.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06 0.09 0.88 0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74 0.06 0.14 0.14
PPR0-0.03 -0.02 -0.13 0.15 0.16 0.02 0.02 0.35 0.96
PPR300.00 0.00 -0.06 0.19 0.19 0.02 0.02 0.46 0.24
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Variable
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
BWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT0.15 0.53 0.45 0.10 0.25 0.16 0.12 -0.10 0.01
WWT0.44 0.16 0.85 -0.29 0.10 0.18 0.07 0.08 0.04
PWWT0.37 0.81 0.20 -0.38 0.01 0.20 0.11 -0.03 0.29
WFEC0.01 -0.07 -0.10 0.19 0.82 0.27 0.32
0.56 0.77
PWFEC0.07 -0.01 -0.02 0.29 0.24 0.38 0.40
0.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06 0.09 0.88 0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74 0.06 0.14 0.14
PPR0-0.03 -0.02 -0.13 0.15 0.16 0.02 0.02 0.35 0.96
PPR300.00 0.00 -0.06 0.19 0.19 0.02 0.02 0.46 0.24
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Variable
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
BWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT0.15 0.53 0.45 0.10 0.25 0.16 0.12 -0.10 0.01
WWT0.44 0.16 0.85 -0.29 0.10 0.18 0.07 0.08 0.04
PWWT0.37 0.81 0.20 -0.38 0.01 0.20 0.11 -0.03 0.29
WFEC0.01 -0.07 -0.10 0.19 0.82 0.27 0.32 0.56 0.77
PWFEC0.07 -0.01 -0.02 0.29 0.24 0.38 0.40 0.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06 0.09 0.88
0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74 0.06
0.14 0.14
PPR0-0.03 -0.02 -0.13 0.15 0.16 0.02 0.02 0.35 0.96
PPR300.00 0.00 -0.06 0.19 0.19 0.02 0.02 0.46 0.24
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Variable
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
BWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT0.15 0.53 0.45 0.10 0.25 0.16 0.12 -0.10 0.01
WWT0.44 0.16 0.85 -0.29 0.10 0.18 0.07 0.08 0.04
PWWT0.37 0.81 0.20 -0.38 0.01 0.20 0.11 -0.03 0.29
WFEC0.01 -0.07 -0.10 0.19 0.82 0.27 0.32 0.56 0.77
PWFEC0.07 -0.01 -0.02 0.29 0.24 0.38 0.40 0.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06 0.09 0.88 0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74 0.06 0.14 0.14
PPR0-0.03 -0.02 -0.13 0.15 0.16 0.02 0.02 0.35
0.96
PPR300.00 0.00 -0.06 0.19 0.19 0.02 0.02 0.46 0.24
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VariableBWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT0.15 0.53 0.45 0.10 0.25 0.16 0.12 -0.10 0.01
WWT0.44 0.16 0.85
-0.290.10 0.18 0.07 0.08 0.04
PWWT0.37 0.81 0.20
-0.380.01 0.20 0.11 -0.03 0.29
WFEC0.01
-0.07 -0.100.19 0.82 0.27 0.32 0.56 0.77
PWFEC0.07 -0.01 -0.02 0.29 0.24 0.38 0.40 0.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06 0.09 0.88 0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74 0.06 0.14 0.14
PPR0-0.03 -0.02 -0.13 0.15 0.16 0.02 0.02 0.35 0.96
PPR300.00 0.00 -0.06 0.19 0.19 0.02 0.02 0.46 0.24
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
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VariableBWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT0.15 0.53 0.45 0.10 0.25 0.16 0.12 -0.10 0.01
WWT0.44 0.16 0.85 -0.29 0.10 0.18 0.07 0.08 0.04
PWWT0.37 0.81 0.20 -0.38 0.01 0.20 0.11
-0.03 0.29
WFEC0.01 -0.07 -0.10 0.19 0.82 0.27 0.32 0.56 0.77
PWFEC0.07 -0.01 -0.02 0.29 0.24 0.38 0.40 0.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06 0.09 0.88 0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74 0.06 0.14 0.14
PPR0-0.03 -0.02
-0.130.15 0.16 0.02 0.02 0.35 0.96
PPR300.00 0.00
-0.060.19 0.19 0.02 0.02 0.46 0.24
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
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VariableBWT WWT PWWT WFEC PWFEC NLB NLW PPR0 PPR30
BWT0.15 0.53 0.45 0.10 0.25 0.16 0.12 -0.10 0.01
WWT0.44 0.16 0.85 -0.29 0.10 0.18 0.07 0.08 0.04
PWWT0.37 0.81 0.20 -0.38 0.01 0.20 0.11 -0.03 0.29
WFEC0.01 -0.07 -0.10 0.19
0.820.27 0.32
0.56 0.77
PWFEC0.07 -0.01 -0.02
0.290.24 0.38 0.40
0.56 0.73
NLB-0.04 0.02 -0.06 0.04 0.06 0.09 0.88 0.13 0.11
NLW0.00 0.02 -0.06 0.04 0.05 0.74 0.06 0.14 0.14
PPR0-0.03 -0.02 -0.13
0.15 0.160.02 0.02 0.35
0.96
PPR300.00 0.00 -0.06
0.19 0.190.02 0.02
0.460.24
Estimates of heritabilities (on the diagonal) and direct additive (above the diagonal) and phenotypic (below the diagonal) correlations for measures of lamb and ewe performance in Katahdin sheep
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Variable
Additive maternal effect for:
BWT WWT PWWT
Maternal BWT 0.16 0.58 0.58
Maternal WWT 0.58 0.10 0.99
Maternal PWWT 0.58 0.99 0.12
WFEC -0.04 0.05 0.21
PWFEC -0.01 0.10 0.29
NLB -0.36 -0.07 -0.02
NLW -0.03 0.08 0.11
PPR0 0.06 -0.08 -0.08
PPR30 0.06 0.09 0.10
Estimates of maternal heritabilities for lamb BW and correlations between maternal additive effects on BW and direct additive effects on other measures of lamb and ewe performance in Katahdin sheep
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Variable
Additive maternal effect for:
BWT WWT PWWT
Maternal BWT 0.16 0.58 0.58
Maternal WWT 0.58 0.10 0.99
Maternal PWWT 0.58 0.99 0.12
WFEC -0.04 0.05 0.21
PWFEC -0.01 0.10 0.29
NLB -0.36 -0.07 -0.02
NLW -0.03 0.08 0.11
PPR0 0.06 -0.08 -0.08
PPR30 0.06 0.09 0.10
Estimates of maternal heritabilities for lamb BW and correlations between maternal additive effects on BW and direct additive effects on other measures of lamb and ewe performance in Katahdin sheep
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Variable
Additive maternal effect for:
BWT WWT PWWT
Maternal BWT0.16 0.58 0.58
Maternal WWT0.58 0.10 0.99
Maternal PWWT0.58 0.99 0.12
WFEC-0.04 0.05 0.21
PWFEC-0.01 0.10 0.29
NLB-0.36 -0.07 -0.02
NLW -0.03 0.08 0.11
PPR0 0.06 -0.08 -0.08
PPR30 0.06 0.09 0.10
Estimates of maternal heritabilities for lamb BW and correlations between maternal additive effects on BW and direct additive effects on other measures of lamb and ewe performance in Katahdin sheep
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Future Research
• Continue to examine interactions of production traits and parasite resistance.
• Development of parasite resistance genomic markers.
• Examine grazing and loafing behavior of parasitized ewes and lambs to predict need for treatment using GPS and drone technology.
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Summary
• We probably should not rely on anthelmintics to control gastrointestinal parasites in sheep and goats
• A systems approach of control should be used.
• Farmers can control nutrition, grazing management, minimize stress, and use genetics to include selection for parasite resistance.
• Farmers should understand the biology of the animal and parasite and perhaps alter management to align the two to minimize outbreaks.
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American Consortium for Small
Ruminant Parasite Control
(www.wormx.info)
Acknowledgments
• This work is supported by USDA, NIFA, OREI in addition to ARS funding.
• Contributions from D.R. Notter, and the ACSRPC.