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Integrating Spatial & Temporal Dynamics in Ecological Modeling: Issues & Directions Michael Barton School of Human Evolution and Social Change

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Page 1: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Integrating Spatial & Temporal

Dynamics in Ecological Modeling:

Issues & Directions

Michael Barton

School of Human Evolution and Social Change

Page 2: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Ecosystems are dynamic

• Not just variation, but change across

space and time

• Dynamic modeling, such as GARP, offers

new ways to study human ecology

• Yet capturing the integrated dynamics of

both space and time remains elusive

Page 3: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Archaeology & paleoecology

• Focus on long-term change

• Also on human-environmental

interaction

• How to integrate these in research protocols?

Page 4: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Space-time modeling: issues for

current methods

• Look at change over time at several

localities

• Look at change across space for several

moments in time

Page 5: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Space-time modeling: issues for

current methods

Page 6: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Space-time modeling: issues for

current methods

M. M. PaleoPaleo

U. U. PaleoPaleo

EpipaleoEpipaleo

Late Late NeolNeol

Early Early NeolNeol

Page 7: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Space-time modeling: issues for

current methods

• High resolution diachronic record in one or a fewsites unwarranted regionalgeneralization across variable space

• High resolution spatial record for a few timeperiods past as a sequence of snapshotswith change happening invisibly between (orstepwise change)

• Conceptualizing rich socioecological variationacross space and complex dynamics throughtime desirable but difficult with current methods

Page 8: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Future directions in space-time

modeling

• Goals for study of long-term dynamics of human ecology

• High resolution models– spatial

– chronological

• Link dynamically so that– state of modeled ecosystem at any given time (t) is in part a

function of ecosystem at prior time (t-1) and affects future state(t+1)

– State of modeled ecosystem at any given locale is in part afunction of state in surrounding locales

• Test against archaeo-ecological record

Page 9: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Future directions in space-time

modeling: an example

• Mediterranean Landscape

Dynamics Project

• Project locations at opposite

ends of Mediterranean Basin

– Encompasses wide range of

ecological & social variation

– Tracks initial spread of

agriculture & replacement of

foraging systems

– Different trajectories to the

appearance of social

complexity and urbanism

Page 10: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Meditereranean Landscape

Dynamics Project

• Agent-based simulation of human landuse:beginning of farming to beginning of urbanism

• Surface process models of ancient landscapesand landcover

• Synoptic climate models

• All linked within a GIS framework so that changein one module can affect state variables thatserve as input to another

• Test and refine against rich archaeological andpaleoecological record

Page 11: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Dynamic space-time modeling

• 3 interlinked modelingenvironments in GISplatform– Potential landscape

model

– Reference landscapechronosequence

– Agropastoralsocioecology model

Vegetation

modeling:

multi-yr. steps

Potential

landscape

model

Terrain

modeling:

multi-yr. steps

Climate

model

(temp&precip)

Paleo-

terrains

(DEM’s)

Reference

landscape

chronoseq

.

Archeological

data

Geological

data

Paleobotanical

data

Veg. edaphic

parameters

Paleo-

vegetation

Prehistoric

settlement

& landuse

Modern

DEM

Agropasto

ral

socioecol

ogy model

Settlement

& landuse

modeling

Agent

Modeling

Terrain

modeling:

multi-yr. steps

Vegetation

modeling:

multi-yr. steps

Climate

model

(temp&precip)

Initial state

Initial state

& validation

at various stages

Page 12: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Dynamic space-time modeling

• Potential landscape model: surfaceprocesses and landcover

Vegetation

modeling:

multi-yr. steps

Potential

landscape

model

Terrain

modeling:

multi-yr. steps

Climate

model

(temp&precip)

Page 13: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Paleo-

terrains

(DEM’s)

Reference

landscape

chronoseq.

Archeological

data

Geological

data

Paleobotanical

data

Veg. edaphic

parameters

Paleo-

vegetation

Prehistoric

settlement

& landuse

Modern

DEM

Dynamic space-time modeling

• Reference landscape chronosequence: surfaceprocesses and landcover

Page 14: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Settlement

Establish

Shrink/grow

Abandon

Location

Landuse

Location/extent

Cultivation (which crops)

Pasture (which animals)

Decision

Algorithms

Information Inputs

Temp. extremes

Precip. amt & dist

Terrain characteristics

Current vegetation

Settlement &

landuse impacts

on terrain &

vegetation

Agent Modeling

Dynamic space-time modeling

• Human landuse: agent simulation

Page 15: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Dynamic space-time modeling

• Climate surface processes &landcover agent simulation

• Landscape socioecology

Settlement

& landuse

modeling

Agent

Modeling

Terrain

modeling:

multi-yr. steps

Vegetation

modeling:

multi-yr. steps

Climate

model

(temp&precip)

Polop Valley Landuse Intensity

M. Paleolithicto Neolithic II

Agropastoral

socioecology

model

Page 16: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Visualization & analyzing space-

time dynamics

• As we begin to approach the goal ofintegrating space and time in ecologicalmodeling, how can we visualize andanalyze results?

• How can we represent n-dimensional datain 2 dimensional media?

• How can we compare and evaluate resultsquantitatively?

Page 17: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Middle PaleolithicUpper PaleolithicLate Upper PaleolithicNeolithic INeolithic II

Polop Valley

Landuse Intensity

Visualizing ecological dynamics

• Animation

Page 18: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Visualizing ecological dynamics

• Animation

– Looks dynamic

– Realistically portrays change through time

– Difficult to evaluate change, similarities, and

differences—visually or quantitatively

• Alternative methods of visualization and

analysis to complement animation

Page 19: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Visualizing ecological dynamics

• Example fromthe PenaguilaValley, Spain

• Terra ASTERimagery for2000-2004– Decorrelation

stretch of bands1-3

– Landcoverchange

• Analysis withGRASS GIS

Page 20: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Visualizing ecological dynamics

• Stacked surfaces/landscapes– Can evaluate change better than with animation

– Good for major changes

– Visual alignment (cell to cell) difficult for detailed evaluation

– Problematic with high temporal resolution--I.e., many stackedlandscapes

Page 21: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Visualizing ecological dynamics

• Stacked surfaces with a

cutting plane. Color

blends from each surface

into next

– Solves alignment problem

– Allows detailed

visualization of change

across multiple time

intervals

– Can only show a space-

time transect (i.e., one

dimensional space)

Page 22: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Visualizing ecological dynamics

• Stacked surfaces with movable cutting plane

• Permits interactive viewing of multiple transects

Page 23: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Visualizing ecological dynamics

• Space-time

volumes (STVs)

• Produced through

3D interpolation

• 4D shapes that

simultaneously

show…

– 2D space (x,y)

– Time (z)

– Socioecological

variable (w)

X (space)

Y (s

pace

)

Z

(tim

e)

Page 24: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Visualizing ecological dynamics

• STVs showing

dynamics in

component 1 of PCA

(Terra ASTER vnir

bands 1-3)

• Values ! 200

• Proxy for barranco

vegetation, mostly

pine space

tim

e

Page 25: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Visualizing socioecological

dynamics

• STVs for landuse change in the Polop Alto

Valley, Spain: M. Paleolithic - Late Neolithic

landuse

intensity

+

-

Page 26: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Analysis of spatial-temporal

dynamics

• Robust suite of methods exist for time

series analysis and spatial patterns

• Comparative lack of quantitative protocols

for characterizing and evaluating dynamics

across space and time together

• Brief survey of potential directions

Page 27: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Analysis of spatial-temporal

dynamics

• Basic change analysis. Normally for

surface pairs

2004

- =

2000

red=positive, blue=negative

Page 28: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Analysis of spatial-temporal

dynamics

• Time series analysis for landscapes

Coefficient of variation (2000-2004). Terra

ASTER PCA component 1. Red=high, blue=low

Page 29: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Analysis of spatial-temporal

dynamics

• Change analysis for STVs

red=2000-2001, green=2002-2004

Page 30: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Analysis of spatial-temporal

dynamics

• Change analysis for STVs (STV[2002-2004]-STV[2000-2001])

2002-2004 > 2000-2001 2002-2004 < 2000-2001

Page 31: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Analysis of spatial-temporal

dynamics

• Representing space-time dynamics as volumesoffers potential for new methods of analysis– Extension of map algebra to volumes already

available

– Regression, trend analysis, and other methods nowapplied to surfaces and point distributions canpotentially be applied to volumes

• Example of ways to address new challengesposed by modeling human ecology across spaceand time

Page 32: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

GRASS as platform for eco-

cultural modeling• Open source

– Modifiable, scriptable

– Multi-platform

– GPL licensing for access and dissemination

– Internationalization

• Rich suite of modeling tools (e.g., r.le, r.neighbors, r.mapcalc)

• 3D volumetric tools

• Visualization tools

Page 33: Integrating Spatial & Temporal Dynamics in Ecological ... · Dynamics Project ¥Project locations at opposite ends of Mediterranean Basin ÐEncompasses wide range of ecological &

Support & collaboration

• NSF: ERE Biocomplexity in the Environment Program,grant BCS-0410269

• ASU: School of Human Evolution and Social Change,School of Earth and Space Exploration, School ofComputing and Informatics, Geographical Sciences,International Institute for Sustainability

• Partners: Universitat de València, Universidad deMurcia, University of Jordan, North Carolina StateUniversity, University of Wisconsin, Hendrix College,Geoarchaeological Research Associates, GRASS GISDevelopment Team.