lab diagnosis of hiv · 2 the role of proviral dna tests • hiv-1 proviral dna can be detected by...

2
1 Dr Sarah Sasson Immunopathology Registrar HIV, Immunology and Infectious Diseases Department and SydPath, St Vincent's Hospital HIV: Basic Virology Courtesy of Philip Cunningham HIV testing @ SydPath 1) Architect 4 th generation chemiluminescence assay Detects p24 Ag and Ab to HIV-1 and HIV-2 2) (if +) Genscreen Detects Ab to HIV-1 and HIV-2 3) (if +) p24 ELISA & HIV Western Blot Courtesy Philip Cunningham, St Vincent's Hospital Sydney Evolution of HIV Western Blot Highly Specific Less Sensitive Expensive $$$ Results may be: POSITIVE NEGATIVE INDETERMINATE DNA PCR RNA PCR p24 Ag 1wk 2wk 3wk 2mo 6mo 1yr 2yr 3yr +8yr early recent/established late Evolution: antibody/ antigen testing response Courtesy of Philip Cunningham The role of proviral DNA tests Detection of HIV-1 proviral DNA by PCR can provide early evidence of HIV-1 infection (approximately 10-14 days after infection), when results of routine diagnostic assays are inconclusive. The linear cDNA transcripted prior to integration is the “proviral” DNA.

Upload: others

Post on 10-Oct-2020

1 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: Lab diagnosis of HIV · 2 The role of proviral DNA tests • HIV-1 proviral DNA can be detected by a PCR that targets a segment of the highly conserved HIV-1 gag gene or LTR region.Clinical

1

Dr Sarah Sasson Immunopathology Registrar

HIV, Immunology and Infectious Diseases Department and SydPath, St Vincent's Hospital

HIV: Basic Virology

Courtesy of Philip Cunningham

HIV testing @ SydPath

1)  Architect 4th generation chemiluminescence assay

•  Detects p24 Ag and Ab to HIV-1 and HIV-2

2)  (if +) Genscreen

•  Detects Ab to HIV-1 and HIV-2

3)  (if +) p24 ELISA & HIV Western Blot

Courtesy Philip Cunningham, St Vincent's Hospital Sydney

Evolution of HIV Western Blot

•  Highly Specific

•  Less Sensitive

•  Expensive $$$

•  Results may be:

  POSITIVE

  NEGATIVE

  INDETERMINATE

DNA PCR RNA PCR

p24 Ag

1wk 2wk 3wk 2mo 6mo 1yr 2yr 3yr +8yr

early recent/established late

Evolution: antibody/ antigen testing response

Courtesy of Philip Cunningham

The role of proviral DNA tests

•  Detection of HIV-1 proviral DNA by PCR can provide early evidence of HIV-1

infection (approximately 10-14 days after infection), when results of routine

diagnostic assays are inconclusive.

•  The linear cDNA transcripted prior to integration is the “proviral” DNA.

Page 2: Lab diagnosis of HIV · 2 The role of proviral DNA tests • HIV-1 proviral DNA can be detected by a PCR that targets a segment of the highly conserved HIV-1 gag gene or LTR region.Clinical

2

The role of proviral DNA tests

•  HIV-1 proviral DNA can be detected by a PCR that targets a segment of the highly

conserved HIV-1 gag gene or LTR region. Clinical studies have indicated this is

highly sensitive (>95%) and specific (>98%).

•  Currently SydPATH is the only site licensed in Australia for this test

•  The limit of detection is 10 copies/μL

•  Research assays can detect 0.3 copies/ μL

HIV Monitoring and management tests

•  CD4 count and percentage

•  HIV VL

•  Viral genotype

•  Viral resistance

•  Viral tropism

•  HLA B57