lassa virus haemorragic fever in benin diagnostic ......• lassa fever disease ++ sub-district...

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LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic- bioSecurity-perspectives Dr Yadouléton Anges, PhD Dr Accrombessi Manfred, MD, PhD Dr Attinsounon Angelo, MD, PhD

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Page 1: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

LASSA VIRUS HAEMORRAGIC FEVER IN BENIN

Diagnostic- bioSecurity-perspectives

Dr Yadouléton Anges, PhDDr Accrombessi Manfred, MD, PhDDr Attinsounon Angelo, MD, PhD

Page 2: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

BNITM• Prof. Dr. Stephan Günther• Prof. Dr. Jonas Schmidt-

Chanasit• Meike Pahlmann• Beate Becker• Durrafour Sophie• Martin Gabriel• Prof . Dr. Michael Ramather Uniervsity of Tubingen• Prof. Dr. Peter Kremsner

Ministry of Health• Pr KINDE-GAZARD Dorothée• Dr DOSSOU-TOGBE PascalWHO representation Prof Issifou Saadou, CEO FORS Prof Adegnika Akim, CERMEL IRCB DPMED • Prof. Gbagudi Fernand• Prof. LOKO Frédéric

Acknowledgments

Page 3: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Lagos

IRRUAGerman collaboration withBernarhd Nocht Institut,Hamburg

Department de virology Bernarhd Nocht Institut, Hamburg, German

Institut Pasteur de Lyon

• 83 samples were received from different parts of Benin in 2016 and sent in the 4 external laboratories (Lagos, IRRUA, Hamburg, Lyon)

• 16 confirmed cases of Lassa fever.

Page 4: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Outbreak of Lassa in Benin2014 ; 2016; 2017; 2018

9 deaths15 suspected cases

28 deaths84 suspected cases

2 deaths8 suspected cases

8 deaths , 7 suspected cases

Page 5: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Situation very sad…, …,

Response of the International communityImplementation of laboratory of haemorragic fever in Benin

German-Benin collaboration (BNITM-MoH)

Page 6: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

350 blood samples were brought from Benin to BNITM for Lassa diagnostic.

80 from the outbreak areaTchaorou

150 from the suspected areaTanguieta

120 Blood bank service

Page 7: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

• All samples were negative on Lassa fever from the suspected area• Some were positive on dengue fever, Dengue II

Page 8: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Surveillance of haemorrhagic fever in Benin (1)

– SMIR (Integreated Disease Surveillance and Response)• Diseases with epidemic potential or early warning system• Lassa fever disease ++

Sub-district level

District level

Departmentallevel

National level

• Head of health sub-district center• Community health workers & CV (in each village of sub-district)• Reporting of common diseases with epidemic potential• Notification of any non malaria fever case non repond to ATB

• Head of district center• Summarize of data from sub-district centers

Regional level• Head of regional centers• Summarize of data from district centers

• Departmental director of health• Summarize of data from regional centers

• MoH (Epidemiology and health department)• Summarize of data from department

Page 9: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Surveillance of haemorrhagic fever in Benin (3)

– SMIR (Global view)

SD1

District level 1

Departmentallevel 1

National level(MoH)

Regional level1

Departmentallevel 2

Regional level3

Regional level4

District level 2

Regional level2

District level 3

District level 4

District level 5

District level 6

District level 7

District level 8

SD2 SD3 SD4 SD5 SD6 SD10SD7 SD8 SD9 SD11 SD12 SD13

Page 10: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Surveillance of haemorrhagic fever in Benin (2)

– SMIR (Periodicity of reporting)

• Non-outbreak period (Per month)• Outbreak period (Per day)

– SMIR/Communication canal

• Telephone (whatsaap)• Paper report +++• Internet (only at departmental level to MoH)

– Based-hospital surveillance (monthly collection from hospital)

• Persistent fever > 38°C non respond to malaria drug and antibiotic• Sample addressed to the MoH laboratory• Diagnostic : Lassa (GPC-S Gene RT-PCR); Lassa-L; Altona

Diagnostic kit-Lassa; Nikkison

Page 11: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Surveillance of haemorrhagic fever in Benin (5)

Page 12: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

– SMIR strength• Peripheral level:

– Good involving of community health workers (CHW)– Good participation of local authorities and leaders

• Central level– Quick alert during the outbreaks– Rapidity of funding mobilization

– SMIR Weakness• Delay of report transmission (> 3-4 month of delay)• Delay of sample transmission to the central laboratory-Cotonou• High fee of communication (SMS, internet)• Lake of health staff and CHW training (< 1 training/year)• Lake of sensitization out of outbreak periods• No compensation of community health workers

Surveillance of haemorrhagic fever in Benin (4)

Page 13: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Implementation of laboratory of Haemorrhagic Fever in Benin (Lazare site)

Room receiving-samples Inactivation-room

Room-extraction de l’ARN, Master Mix Salle de revelation

1

3

2

4

Page 14: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Laboratory-Diagnostic-qPCR

Page 15: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Diagnostic of Lassa Fever

Lassa virus : RT- PCR.

Protocole 1KB_PCR S-gene Panarena_PCR

Same protocole with BNITM from German: comparaison of results

Page 16: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Ongoing research : cartography of mastomysrodents

− Main Hypothesis

• The Lassa fever virus reservoirs are native or imported?

• If native in Benin, where?

• No data currently available

− High probability of future outbreaks in Benin

• Poor surveillance system

• High migration flow between Benin and Nigeria

• Low reactivity of health system

• Need to be ready for the next outbreak

• Develop and assess preventive strategy

Page 17: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Mastomys--DistributionMastomys Ecology,

Distribution and habitatationof rodentsField, HomeAll locality from Benin

Natural predatorsPython regiusBitis arietansOther locations

Frequently used as traditionalmedication

Page 18: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Research reservoirs

Page 19: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

P3 Laboratory on the field

Page 20: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

Results

• Some positive cases results of Lassa feverfound among the sample from people and rodents in Benin.– Need of further investigations in the all country

• The sequency results found that Benin has itsown viral strain different to Nigeria

• Benin has his own viral reservoir? • Result is currently ongoing (Yadouleton et al.,

2018)

Page 21: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

CTE of CHUD BA• Under construction : a small arranged space

• Sanitation, water

• 1 Ambulance + 1 Pick-up

• Team: 2 MD, 2 Nurses, 2 midwives, 3

hygienists, 2 biotechnologists, 2 drivers

• Average 2 confirmed / 10 suspected cases per

outbreak

Page 22: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district
Page 23: LASSA VIRUS HAEMORRAGIC FEVER IN BENIN Diagnostic ......• Lassa fever disease ++ Sub-district level. District level. Departmental level. National level • Head of health sub-district

MANY THANKS FOR YOUR ATTENTION