lecture-30 - pennsylvania state university · 2012-12-13 · release notes for developers bugs and...
TRANSCRIPT
2012$%$BMMB$597D:$Analyzing$Next$Genera;on$Sequencing$Data$
$$Week$15,$Lecture$30$
István'Albert''
Biochemistry$and$Molecular$Biology$$and$Bioinforma;cs$Consul;ng$Center$
$Penn$State$
Discussion$on$the$project$
• Some$observa;ons$on$the$project$
• What$went$well$and$what$went$wrong$
• Assembly$is$not$well$defined$%$small$changes$in$hash$sizes$!$different$results$
Assembly$on$forward$strand$
Assembly$on$reverse$strand$
Heng$Li’s$bioawk$
git$clone$hVps://github.com/lh3/bioawk.git$