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Chemistry 328N Lecture 6 Infrared spectroscopy February 4, 2016

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Page 1: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Lecture 6

Infrared spectroscopy

February 4, 2016

Page 2: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

D2O in H2O

D2O ice in H2O D2O ice in D2O

Page 3: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Chemical Exchange

Hydrogens on electronegative atoms such as

Oxygen and Nitrogen

– Undergo rapid “exchange” and often give only

a relatively broad singlet due to “averaging”

– These hydrogens also exchange (equilibrate)

with Deuterium in D2O and “disappear” from

the spectrum

Page 4: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Common 1H-nmr Solvents

DCCl3

CCl4

(CD3)2SO

D2O

C6D6

Page 5: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5

0

1

2

3

4

5

6

4.700.00

0.10

0.20

0.30

0.40

0.50

0.60

0.70

0.80

0.90

1.00

1.10

1.20

1.30

1.40

3.70 3.600

1

2

3

4

5

ClOCH3

H H

a

b c

2680 2675 2670 2665 2660 2655 2650 2645 2640 2635 2630 26250.00

0.10

0.20

0.30

0.40

0.50

0.60

0.70

0.80

0.90

1.00

1.10

1.20

2643.652647.85

2649.932654.132656.232660.43

2662.552666.75

Page 6: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

2680 2675 2670 2665 2660 2655 2650 2645 2640 2635 2630 26250.00

0.10

0.20

0.30

0.40

0.50

0.60

0.70

0.80

0.90

1.00

1.10

1.20

2643.652647.85

2649.932654.132656.232660.43

2662.552666.75

ClOCH3

H H

a

b c

Whats with what??

Page 7: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

2680 2675 2670 2665 2660 2655 2650 2645 2640 2635 2630 26250.00

0.10

0.20

0.30

0.40

0.50

0.60

0.70

0.80

0.90

1.00

1.10

1.20

2643.652647.85

2649.932654.132656.232660.43

2662.552666.75

ClOCH3

H H

a

b c

bc

ab

Coupling Constants

Page 8: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

OCl

CH3

HH

6.0 5.5 5.0 4.5 4.0 3.5 3.00.0

0.5

1.0

1.5

Chemical Shift additivity estimates

Caution…..estimates only!!

Table structure Shift

-CH2-CI 3.3

-CH2-O- 3.6

total 6.9

Subtract -CH2-CH3 1.2

Crude Estimate 5.7

Page 9: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

0

Type of H d

1.6-2.6

2.0-3.0

0.9

1.2-1.4

1.4-1.7

2.1-2.3

0.5-6.0

2.2-2.6

3.3-4.0

2.2-2.5

2.3-2.8

0.5-5.0

RC CH

O

O

RCH2 OR

(C H3 ) 4 Si

ArC H3

RCH3

RCCH3

ROH

ArC H2 R

RCH2 R

R3 CH

R2 NH

RCCH2 R

R2 C=CRC HR2

Type of H d

Chemical Shift - 1H-NMR

Page 10: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

1H Chemical Shifts

Page 11: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

13C Chemical Shifts

Page 12: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Page 13: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

13C NMR Spectra

C-H: “decoupled”

c

c

d

d

b

b

a

a

C-H “coupled”

Page 14: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Page 15: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

13C-nmr Spectroscopy

Each nonequivalent 13C gives a

different, resolved signal

Page 16: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

The DEPT Experiment

In the hydrogen-decoupled mode, information on spin-

spin coupling between 13C and attached hydrogens is

lost

Distortionless Enhancement by Polarization Transfer

(DEPT) is an NMR technique for determining whether 13C signals are from CH3, CH2, CH, or quaternary

carbons

DEPT is an instrumental trick that provides the means

to acquire this information

Page 17: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

The DEPT method

DEPT uses a complex series of pulses in

both the 1H and 13C ranges, with the result

that CH3, CH2, and CH signals exhibit

different phases;

– signals for CH3 and CH carbons are recorded as

positive signals (odd numbers of H)

– signals for CH2 carbons are recorded as

negative signals (even numbers of H)

– quaternary carbons give no signals in the DEPT

method (zero H)

OPEN ?? ☺

Page 18: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Broadband decoupled 13C nmr spectrum

From Dept

Page 19: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Even

Even

Odd

Odd

Odd

Page 20: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

An Unknown Empirical formula C4H9, MW =114

70 60 50 40 30 20 10 0 -100

5

10

15

20

25

30

35

40

45

50

55

60

65

70

75

80

85

90

95

100

105

110

115

120

0.00 TMS

25.60

35.00

35.0

25.6

Positive in DEPT

Disappears in

DEPT

TMS

Page 21: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Whatzit??

Page 22: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

13C-NMR Spectroscopy review

Each nonequivalent 13C gives a different signal

Low abundance means weak signals

C-C splitting is insignificant

C-H splitting is big and complex so it is “turned

off” by “decoupling”

Range of Chemical Shifts is large compared to H

Some Coupling info can be recovered by DEPT

Integrals of 13C spectra are not useful except under

very special circumstances

Mnemonic device…. PONE???

Page 25: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Molecular Vibrations For a molecule to absorb IR radiation, the bond

undergoing vibration

– must be polar (change dipole moment)

Covalent bonds that do not meet this criterion are

said to be IR inactive

– the C-C double and triple bonds of symmetrically

substituted alkenes and alkynes, for example, do not

absorb IR radiation because they are not polar bonds

H2 N2 CO2 ??????

Page 26: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

THE ENERGY OF ELECTROMAGNETIC WAVES

• (nu-bar) represents wavenumber, the

number of wavelengths in 1 cm

• This is a unit of frequency!

• units are 1/cm or cm-1 (Kaysers)

lu

luluc ==

1

10 microns (micrometers) = 1000 cm-1

ln hc

chhE ===

Page 27: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Harmonic Oscillator Model

μ

K

1

m1

m2

ν =

mm

)m)(m(μ

21

21

=

Eν = h νo (ν + 1/2)

quantized

vibrational

energy

h = Planck’s constant

νo = characteristic frequency

ν = 0, 1, 2, 3,….In real molecules,

oscillation is anharmonic.

Page 28: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Energy quantization of the oscillator

classical and quantum behavior are very different:

energy

classical: all possible values of total

energy are allowed

quantum: only certain ‘energy levels’ allowed

note that although the energy levels are equally spaced for the harmonic oscillator this is not true for all QM systems

note also that it is not possible for the quantum harmonic oscillator to have zero energy – it must have some energy even at 0 K

0 01234

n. . . .

‘quantum number’

Page 29: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

The IR Chart

4000 400

2.5 20

0

100 Micrometers

Wavenumber (cm -1 )

Tra

nsm

itta

nce

(%

)

Page 30: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Infrared Spectrum

Page 31: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Functional group absorptions

=>=>

Page 32: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Structural unit Frequency, cm-1

Stretching vibrations (single bonds)

sp C—H 3310-3320

sp2 C—H 3000-3100

sp3 C—H 2850-2950

sp2 C—O 1200

sp3 C—O 1025-1200

Infrared Absorption Frequencies

Page 33: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

Stretching vibrations (multiple bonds)

Structral unit Frequency, cm-1

Infrared Absorption Frequencies

C C 1620-1680

—C N

—C C— 2100-2200

2240-2280

Page 34: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

IR Spectra of chloroformand deuterochloroform

Mode of vibration CHCl3 CDCl3

C-H stretching 3020 2256

C-H bending 1219 912

C-Cl stretching 773 737

C-Cl bending 671 652* Spartan ’02 AM1 minimization

Shift of peak due to replacement of H with D (2x mass)

Incr

eas

ing

abso

rban

ce

Page 35: Lecture 6 Infrared spectroscopywillson.cm.utexas.edu/Teaching/Chem328N/Files/Lecture 06-16.pdfMolecular Vibrations For a molecule to absorb IR radiation, the bond undergoing vibration

Chemistry 328N

IR Group Correlation Tables