method for combining unfold with sense or smashdir.nhlbi.nih.gov/labs/lce/staffpages/kellmanp/...[2]...

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0 5 10 15 20 25 30 35 0 50 100 150 FOV 0 +1 -1 +2 -2 +3 -3 0 δk k k=0 1/∆k Theory The Fourier pair relationship between sampled k-space and image data for the i-th coil may be written as: F i (k x , k y , t) × (1/ k) comb[( k -δk) / k] f (x,y,t) s i (x,y) * {comb ( k y ) e –j 2 π δky }, where the asterisk denotes convolution, s i (x,y) is the coil sensitivity for coil i, k is the sample spacing, and δk is the sampling phase, as illustrated in Fig 1(a). Figure 1. (a) k-space sampling and (b) corresponding point spread function illustrating the phase of aliased components for general case, (c) point spread function for k=FOV/4. The phase of the n-th aliased image, φ n =nδk/k, is a linear function of the k-space sampling offset, δk. The UNFOLD method [1] for R=2 fold interleaving uses δk= k/2 and sets the sample spacing k = 2/FOV, with FOV defined as the full, unaliased field-of-view. In this way, the phase of the alias component alternates between 0 and π, thereby alternating the sign of the undesired component. The sequence of reconstructed images (within FOV) may be written as: Σ n (-1) n t [f(x, y+nFOV/2,t) s i (x,y+nFOV/2)] , where t=0,1,2,… is a discrete time index. If the highly dynamic region is restricted to the center ½ FOV, then the relatively static top ¼ FOV and bottom ¼ FOV which alias into the center can be eliminated with a temporal low pass filter. UNFOLD (R=2) may be combined with SENSE (R=2) to achieve a 4x reduction in phase encodes by choosing a phase encode spacing k=4/FOV, and interleave even and odd time frames by shifting phase encodes by k/2=2/FOV. The image reconstructed from the i-th coil will be the sum of aliased images: Σ n (-1) n t [f(x, y+nFOV/4,t) s i (x,y+nFOV/4)] . The alias components with odd n have alternating sign, therefore these components can be effectively temporally lowpass filtered, provided that the highly dynamic portion of the image is restricted to the central ¼ FOV. The remaining alias components, f(x,y±FOV/2), can be separated using the SENSE method with 2 or more coils, with additional coils increasing the SNR. This specific case is illustrated in Fig 1(c) where the blue aliased images, corresponding to odd n, are rejected using UNFOLD, and the red aliased images, corresponding to even n, are rejected using SENSE. METHODS METHODS Method for Combining UNFOLD with SENSE or SMASH Peter Kellman and Elliot R. McVeigh Laboratory of Cardiac Energetics, National Heart Lung and Blood Institute, Bethesda Maryland 20892 USA The purpose of this study was to develop a method for increasing the speed of MR imaging by combining the existing methods of UNFOLD with either SENSE or SMASH. The UNFOLD technique [1] is based on time interleaving of k-space lines in sequential images and exploits the property that the outer portion of the field of view is relatively static. The SENSE [2] and SMASH [3] techniques exploit the differences in spatial sensitivity of multiple receiver coils to eliminate the aliased component that results from undersampling. We have shown in theory that the UNFOLD method may be combined with either SENSE or SMASH to achieve an overall speed increase of 4:1 (2 from each method). We have shown that the restriction of using the UNFOLD technique combined with either SENSE or SMASH is that the highly dynamic portion of the field of view must be constrained to the center ¼ of the FOV. Results are presented for using combined SENSE and UNFOLD to image the flow in the aorta using phase contrast. A segmented k-space acquisition was used to achieve the desired temporal resolution. By combining SENSE and UNFOLD, the breath-hold was reduced from 40 sec to 10 sec. INTRODUCTION INTRODUCTION REFERENCES REFERENCES 1. Madore, B, Glover, GH, Pelc, NJ. Magn Reson Med 42(5):813-828, 1999. 2. Pruessmann, KP, Weiger, M, Scheidegger, MB. Boesiger, P. Magn Reson Med 42(5):952-962, 1999. 3. Sodickson, DK, Manning, W. Magn Reson Med 38(4):591-603, 1997. 4. Epstein, FH, Wolff, SD, Arai AE. Magn Reson Med 41(3):609-613, 1999. CONCLUSIONS CONCLUSIONS UNFOLD (R=2) and SENSE (R=2) may be combined to achieve overall R=4 rate factor Highly dynamic field of view is constrained to central ¼ of unaliased FOV Demonstrated combined SENSE and UNFOLD for aortic flow application using gated, segmented k-space acquisition of phase contrast images. Breath-hold time was reduced from 40 sec to 10 sec. Figure 3. Magnitude Image Reconstructions: (A) aliased images without UNFOLD or SENSE (B) using UNFOLD temporal filter without SENSE (C) using SENSE without UNFOLD) (D) using combined SENSE and UNFOLD. Figure 6. Mean velocity within aorta (axial slice) versus cardiac phase with 26 msec temporal resolution. The breath-hold time was reduced from 40 sec to 10 sec using combined SENSE and UNFOLD. SENSE-UNFOLD (10 sec breath-hold) Normal (40 sec breath-hold) RESULTS RESULTS Table 1 Imaging Parameters Scanner: GE Signa 1.5T Echo Train Length: 4 Pulse Seq: Fast Gradient Recalled Echo Train [4] Bandwidth: ±62.5 kHz K-space acq: ECG Gated, Segmented, Interleaved TR: 13 msec Coils: 4-element cardiac phased array FOV: 240x240 mm (192 freq x 160 phase) # phase breath-hold Resolution: 1.25 mm x 1.5mm encodes time Phase Contrast: z-axis (thru plane) acquired: (sec) Venc: 150 cm/sec full k-space 160 40 Flip angle: 15 degrees UNFOLD 80 20 Slice thickness: 10 mm SENSE/UNFOLD 40 10 A C B D Figure 2. ECG gated, segmented k-space acquisition for phase contrast imaging with combined SENSE and UNFOLD Figure 5. Phase image of axial slice showing aortic flow using combined SENSE and UNFOLD. Figure 4. Sagital localizer image showing axial slice location. time 1 41 81 121 1 41 81 121 3 43 83 123 3 43 83 123 5 45 85 125 5 45 85 125 7 47 87 127 7 47 87 127 1 2 1 2 3 4 1 2 3 4 1 2 3 4 1 2 3 4 1 2 3 4 1 1 41 81 121 1 41 81 121 3 43 83 123 3 43 83 123 2 5 45 85 125 5 45 85 125 7 47 87 127 7 47 87 127 3 9 49 89 129 9 49 89 129 11 51 91 131 11 51 91 131 4 13 53 93 133 13 53 93 133 15 55 95 135 15 55 95 135 5 17 57 97 137 17 57 97 137 19 59 99 139 19 59 99 139 6 21 61 101 141 21 61 101 141 23 63 103 143 23 63 103 143 7 25 65 105 145 25 65 105 145 27 67 107 147 27 67 107 147 8 29 69 109 149 29 69 109 149 31 71 111 151 31 71 111 151 9 33 73 113 153 33 73 113 153 35 75 115 155 35 75 115 155 10 37 77 117 157 37 77 117 157 39 79 119 159 39 79 119 159 cardiac phase heartbeat echo# flow encode velocity (cm/sec) cardiac phase φ 0 -φ -ACKNOWLEDGEMENT ACKNOWLEDGEMENT The authors would like to thank Dr. Fredrick Epstein for his assistance in imaging and pulse sequence design.

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  • 0 5 10 15 20 25 30 35

    0

    50

    100

    150

    FOV

    0

    +1

    -1

    +2

    -2

    +3

    -3

    0

    δk

    ∆k

    k=0

    1/∆k

    ……

    TheoryThe Fourier pair relationship between sampled k-space and image data for the i-th coil

    may be written as:Fi (kx, ky, t) × (1/ ∆k) comb[( k -δk) / ∆k] ⇔ f (x,y,t) si(x,y) * {comb ( ∆k y ) e –j 2 π δk y},

    where the asterisk denotes convolution, si(x,y) is the coil sensitivity for coil i, ∆k is the sample spacing, and δk is the sampling phase, as illustrated in Fig 1(a).

    Figure 1. (a) k-space sampling and (b) corresponding point spread function illustrating the phase of aliased components for general case, (c) point spread function for ∆k=FOV/4.

    The phase of the n-th aliased image, φn=2πnδk/∆k, is a linear function of the k-space sampling offset, δk. The UNFOLD method [1] for R=2 fold interleaving uses δk = ∆k/2 and sets the sample spacing ∆k = 2/FOV, with FOV defined as the full, unaliased field-of-view. In this way, the phase of the alias component alternates between 0 and π, thereby alternating the sign of the undesired component. The sequence of reconstructed images (within FOV) may be written as:

    Σn (-1)n t [f(x, y+nFOV/2,t) si(x,y+nFOV/2)] ,

    where t=0,1,2,… is a discrete time index. If the highly dynamic region is restricted to the center ½ FOV, then the relatively static top ¼ FOV and bottom ¼ FOV which alias into the center can be eliminated with a temporal low pass filter.

    UNFOLD (R=2) may be combined with SENSE (R=2) to achieve a 4x reduction in phase encodes by choosing a phase encode spacing ∆k=4/FOV, and interleave even and odd time frames by shifting phase encodes by ∆k/2=2/FOV. The image reconstructed from the i-th coil will be the sum of aliased images:

    Σn (-1)n t [f(x, y+nFOV/4,t) si(x,y+nFOV/4)] .

    The alias components with odd n have alternating sign, therefore these components can be effectively temporally lowpass filtered, provided that the highly dynamic portion of the image is restricted to the central ¼ FOV. The remaining alias components, f(x,y±FOV/2), can be separated using the SENSE method with 2 or more coils, with additional coils increasing the SNR. This specific case is illustrated in Fig 1(c) where the blue aliased images, corresponding to odd n, are rejected using UNFOLD, and the red aliased images, corresponding to even n, are rejected using SENSE.

    METHODSMETHODS

    Method for Combining UNFOLD with SENSE or SMASHPeter Kellman and Elliot R. McVeigh

    Laboratory of Cardiac Energetics, National Heart Lung and Blood Institute, Bethesda Maryland 20892 USA

    The purpose of this study was to develop a method for increasing the speed of MR imaging by combining the existing methods of UNFOLD with either SENSE or SMASH. The UNFOLD technique [1] is based on time interleaving of k-space lines in sequential images and exploits the property that the outer portion of the field of view is relatively static. The SENSE [2] and SMASH [3] techniques exploit the differences in spatial sensitivity of multiple receiver coils to eliminate the aliased component that results from undersampling.

    We have shown in theory that the UNFOLD method may be combined with either SENSE or SMASH to achieve an overall speed increase of 4:1 (2 from each method). We have shown that the restriction of using the UNFOLD technique combined with either SENSE or SMASH is that the highly dynamic portion of the field of view must be constrained to the center ¼ of the FOV.

    Results are presented for using combined SENSE and UNFOLD to image the flow in the aorta using phase contrast. A segmented k-space acquisition was used to achieve the desired temporal resolution. By combining SENSE and UNFOLD, the breath-hold was reduced from 40 sec to 10 sec.

    INTRODUCTIONINTRODUCTION

    REFERENCESREFERENCES

    1. Madore, B, Glover, GH, Pelc, NJ. Magn Reson Med 42(5):813-828, 1999.2. Pruessmann, KP, Weiger, M, Scheidegger, MB. Boesiger, P. Magn Reson Med 42(5):952-962, 1999.3. Sodickson, DK, Manning, W. Magn Reson Med 38(4):591-603, 1997.4. Epstein, FH, Wolff, SD, Arai AE. Magn Reson Med 41(3):609-613, 1999.

    CONCLUSIONSCONCLUSIONS

    • UNFOLD (R=2) and SENSE (R=2) may be combined to achieve overall R=4 rate factor• Highly dynamic field of view is constrained to central ¼ of unaliased FOV• Demonstrated combined SENSE and UNFOLD for aortic flow application using gated, segmented k-space acquisition of phase contrast images. Breath-hold time was reduced from 40 sec to 10 sec.

    Figure 3. Magnitude Image Reconstructions: (A) aliased images without UNFOLD or SENSE (B) using UNFOLD temporal filter without SENSE (C) using SENSE without UNFOLD) (D) using combined SENSE and UNFOLD.

    Figure 6. Mean velocity within aorta (axial slice) versus cardiac phase with 26 msec temporal resolution. The breath-hold time was reduced from 40 sec to 10 sec using combined SENSE and UNFOLD.

    SENSE-UNFOLD (10 sec breath-hold)

    Normal (40 sec breath-hold)

    RESULTSRESULTS

    Table 1 Imaging Parameters

    Scanner: GE Signa 1.5T Echo Train Length: 4Pulse Seq: Fast Gradient Recalled Echo Train [4] Bandwidth: ±62.5 kHzK-space acq: ECG Gated, Segmented, Interleaved TR: 13 msecCoils: 4-element cardiac phased arrayFOV: 240x240 mm (192 freq x 160 phase) # phase breath-holdResolution: 1.25 mm x 1.5mm encodes timePhase Contrast: z-axis (thru plane) acquired: (sec)Venc: 150 cm/sec full k-space 160 40 Flip angle: 15 degrees UNFOLD 80 20Slice thickness: 10 mm SENSE/UNFOLD 40 10

    A

    C

    B

    D

    Figure 2. ECG gated, segmented k-space acquisition for phase contrast imaging with combined SENSE and UNFOLD

    Figure 5. Phase image of axial slice showing aortic flow using combined SENSE and UNFOLD.

    Figure 4. Sagital localizer image showing axial slice location.

    ……time1 4

    1 81 121

    1 41 81 121

    3 43 83 123

    3 43 83 123

    5 45 85 125

    5 45 85 125

    7 47 87 127

    7 47 87 127

    1 21 2 3 4

    1 2 3 4 1 2 3 4 1 2 3 4 1 2 3 4

    1 1 41 81 121 1 41 81 121 3 43 83 123 3 43 83 1232 5 45 85 125 5 45 85 125 7 47 87 127 7 47 87 1273 9 49 89 129 9 49 89 129 11 51 91 131 11 51 91 1314 13 53 93 133 13 53 93 133 15 55 95 135 15 55 95 1355 17 57 97 137 17 57 97 137 19 59 99 139 19 59 99 1396 21 61 101 141 21 61 101 141 23 63 103 143 23 63 103 1437 25 65 105 145 25 65 105 145 27 67 107 147 27 67 107 1478 29 69 109 149 29 69 109 149 31 71 111 151 31 71 111 1519 33 73 113 153 33 73 113 153 35 75 115 155 35 75 115 15510 37 77 117 157 37 77 117 157 39 79 119 159 39 79 119 159

    cardiac phase

    hear

    tbea

    t

    echo#flow encode

    velo

    city

    (cm

    /sec

    )

    cardiac phase

    2φφ0-φ-2φ

    ACKNOWLEDGEMENTACKNOWLEDGEMENT

    The authors would like to thank Dr. Fredrick Epstein for his assistance in imaging and pulse sequence design.