methods and challenges in ocean acidification monitoring

1
Methods and Challenges in Ocean Acidification Monitoring in Puget Sound KING COUNTY MARINE MONITORING METHODS WHAT ARE SOME CHALLENGES? WHY MONITOR OCEAN ACIDIFICATION? Ocean acidification (OA) refers to the process of oceans absorbing increasing CO2 from the atmosphere, resulting in decreased pH and potentially corrosive conditions to organisms like shellfish. In late 2015, the marine monitoring program at King County added OA indicators in order to begin to understand baseline conditions and trends in in Central Puget Sound (King County, 2015), and contribute to sound-wide efforts. This region can be particularly vulnerable due to processes such as upwelling of high CO2 Pacific waters that enter Puget Sound, as well as inputs of local nutrients and organic matter that can potentially exacerbate the problem (Feely, et al., 2010). Also, pH is a key property due to impact on rates of chemical reactions and thresholds of biological toxicity, such as changing toxicity of ammonia to fish and crustaceans with changing pH, with higher vulnerability at larval and juvenile stages (Eddy, 2005). R/V Sound Guardian King County Marine Monitoring Webpage and data access: http://green2.kingcounty.gov/marine Stephanie Jaeger King County Dept. of Natural Resources and Parks, Seattle, Washington [email protected] Offshore Waters Sampled bi-weekly at 14 sites (monthly Jan & Dec) Full CTD profiles (temperature, salinity, density, DO, fluorescence, PAR, transmissivity, nitrate) Discrete samples for dissolved nutrients (ammonia, nitrate+nitrite, silica, orthophosphate),TSS, fecal indicator bacteria, chlorophyll-a Beach Waters Sampled monthly Analyzed for dissolved nutrients, fecal indicator bacteria, temperature, and salinity Moorings Near-surface depths (1 to 10m) at 4 sites Temperature, salinity, dissolved oxygen, fluorescence, turbidity, and pH SeaFET pH at 2 sites, SUNA nitrate at one site, Met station at two sites Discrete samples for total alkalinity and dissolved inorganic carbon (DIC) at 2 sites Phytoplankton Sampled bi-weekly at 10 sites (monthly Jan & Dec) FlowCAM analysis of 10-300 μm size range Species list for each sample compiled by microscopy Zooplankton Sampled bi-weekly at 3 sites (monthly Jan & Dec) Full water column vertical tows and Bongo net tows SUMMARY In partnership with the UW Northwest Environmental Moorings and PMEL Carbon Groups, total alkalinity and DIC collection and preservation methods were compared in August 2016 at the Point Wells ORCA mooring, in order to ground truth an alternative method. Three treatments completed at three depths: RESULTS Mean and one std. deviation of total alkalinity and DIC results by treatment method and depth (n = 3). No significant difference between each method (p = 0.5 and 0.4; respectively); however, in general, more variability is observed in the filtered and delayed poisoning method. Salinity vs. measured total alkalinity for all samples (n=76). Red dots are from a nearshore site in inner Quartermaster Harbor, near creek drainages. Blue triangles are from Pt. Williams and Pt. Wells in the Central Basin. The black line represents the equation derived in the Fassbender study. Components currently used for OA indicators In-situ moorings measure pH and other variables at 15-minute intervals. Total alkalinity and DIC collected monthly supplement and quality control pH data, analyzed by the PMEL Carbon Group at NOAA following the methods of Dickson et. al (2007). King County Environmental Lab prohibits use of mercury, so alternative preservation is used. Samples filtered (0.45 μm) using a peristaltic pump from a Niskin bottle, following Bockmon and Dickson (2014) methods, and later poisoned with mercuric chloride at PMEL to extend holding times. External pH data from the SeaFET corrected with salinity, as internal pH has been more susceptible to biofouling Mooring pH is corrected by calculated total pH (derived from TA/DIC samples) if needed, preferably during well-mixed conditions (Bresnahan et. al, 2014). Inner Quartermaster Harbor on Vashon Island, one of the OA monitoring sites. Location of offshore marine program stations in the Central Basin. OA monitoring sites are starred. Retrieval of the Quartermaster Harbor SeaFET instrument. Preparing the zooplankton bongo net tow, pictured with the CTD rosette. I. Prior to characterizing long-term trends in pH such as due to processes like ocean acidification, it is important to understand the uncertainty of pH measurements and the variability on short time scales, such due to interplay of photosynthesis and respiration. Accurately measuring pH is limited by (Bresnahan, et al., 2014).: Initial calibration approach and quality of validation samples Sensor performance, conditioning and drift Quality of auxiliary measurements (e.g. temperature and salinity) II. In order to better understand OA dynamics and ecosystem impacts, it is important to measure other carbonate parameters besides pH alone (Newton, et al., 2015). The biological process of shell formation of organisms like shellfish is related to the aragonite saturation state ( Ω Aragonite ). Values less than one indicate this mineral has a higher potential to dissolve, with some variability based on species and habitat distribution. E.g., the concentration of human-caused CO2 has been linked to the dissolution of one species zooplankton (pteropods) off the Pacific coast (Feely et al., 2016). In order to derive Ω Aragonite , at least two properties of the carbonate system must be characterized. OBJECTIVE 1: HOW DO ALTERNATIVE SAMPLE PRESERVATION METHODS COMPARE? OBJECTIVE 2: CAN SALINITY BE USED TO EMPIRICALLY DERIVE T OTAL A LKALINITY IN CENTRAL PUGET SOUND? OBJECTIVE 3: CAN THIS LEAD TO IMPROVEMENTS IN PH TIME SERIES AND UNDERSTANDING CARBONATE DYNAMICS? ORCA water column profiles at Pt. Well on 8/8/2016. Solid lines show profiles after TA/DIC water sampling; dotted lines show earlier profiles. Green diamonds show discrete salinity results and sample depths. 1) No filter and samples immediately poisoned with HgCl2 after collection (most common method) 2) Filtered (0.45 μm) and 24-hour delay in poisoning with HgCl2 upon arrival at PMEL lab (King County method) 3) Filtered and immediately poisoned with HgCl2 Results: All methods fall within ± 2 μmol/kg specification for both DIC and total alkalinity, with the exception of the 90-m total alkalinity samples with the filtered and delayed treatment (± 4 μmol/kg). The relative std. deviation for all samples is < 0.2%. Organic matter can contribute to alkalinity, and may lead to some differences between the filtered and unfiltered samples, though not significantly shown here. If possible, best to directly measure at least two properties of the carbonate system to understand ocean acidification (OA) In lieu of a 2 nd carbonate property, it is possible to empirically derive other OA indicators, as long as measurement errors are minimal and data are carefully quality controlled and validated with water samples The alternative filtration method may be used, as long as samples are preserved with HgCl 2 in a reasonable timeframe. Replicate samples are recommended for better accuracy. Further work is needed prior to using a different preservative such as ZnCl 2 Empirically-derived total alkalinity results support the Fassbender study (2016) but further stresses the need for a different calculation at low salinities (<26 PSU) More work is needed in order to successfully predict aragonite saturation state in Central Puget Sound, with the goal of using as a gauge of ocean acidification impacts to local species and ecosystems REFERENCES Only one in-situ carbonate variable (pH) is currently measured, so exploring whether a 2 nd variable can be derived is central to understanding OA dynamics like aragonite saturation state. All of King County’s discrete salinity results are compared to total alkalinity (TA) samples analyzed by PMEL, and compared to the empirical salinity/TA relationship shown by Fassbender et. al (2016). Results: This comparison follows a similar pattern to the Fassbender study, where the tightest relationship between salinity and TA occurs at salinities > 26 PSU. This suggests the need for development of a stepwise relationship for lower salinities commonly found in Puget Sound. Also, the median residual between measured TA and empirical TA for the higher salinity samples is -14 μmol/kg, which may be attributed to different collection methods, where filtration can remove some of the organic alkalinity component to TA. Residuals are calculated from measured TA minus empirically-derived TA, where negative values indicate that the measurements are lower than predication by the TA/S relationship. Dotted lines show ± 2σ for all data. Beach site on Vashon Island, looking over Puget Sound (S. Jaeger) King County’s Point Williams monitoring buoy in Central Puget Sound near Lincoln Park Example of time series at Point Williams mooring (1m) from Sept. Nov. 2016. Temperature, salinity, and DO are from a YSI 6600 V2 sonde co- located with a SeaFET instrument. In the bottom panel, Ω aragonite (blue) Is empirically derived from external pH and salinity. Error bounds (pink) are calculating assuming a combined error up to ±0.02 pH and ±30 μmol/kg total alkalinity uncertainties. Zooming in to one-week of the time series at Point Williams in mid-October, when multiple methods were used for pH water sample analysis on Oct. 18. External pH (salinity corrected) falls within 0.02 pH of all the water samples, while internal pH has drifted out of spec, likely due to biofouling. Note also the large error bounds in derived Ω aragonite. . Data collected at 15-minute intervals at moorings is helpful for understanding temporal dynamics in the carbonate system, where daily and seasonal swings in pH can far exceed changes in long-term trends. One goal is to use existing data to empirically calculate Ω aragonite , an ecologically-relevant OA indicator. Results: Initial results capture fluctuations and patterns in pH and Ω aragonite over time; however, more work is needed to understand uncertainties in these relationships. For example, a measurement error of -0.02 pH and -30 μmol/kg TA leads to close to 0.1 Ω aragonite error, which could push the calculation below the threshold of 1, and may not represent natural conditions. Bockmon & Dickson (2014). Limnol. and Oceanogr: Methods, 12, 191-195. Bresnahan, Martz, Takeshita, Johnson, & LaShomb. (2014). Methods in Oceanography, 9, 44 - 60. Dickson, Sabine, & Christian (Eds.). (2007). PICES Special Publication 3:191. Eddy. (2005). Review, J. of Fish Biology, 67(6), 1495-1513. Fassbender, Alin, Feely, Sutton, Newton, & Byrne (2016). Estuaries and Coasts, 1-15. Feely, Alin, Newton, Sabine, Warner, Devol, et al. (2010). Estuarine, Coastal and Shelf Science, 88, 442-449. Feely, Alin, Carter, Bednarsek, Hales, Chan, Hill, et. al (2016). Estuarine, Coastal and Shelf Science,183, 260-270. Newton, Feely, Jewett, Williamson, & Mathis. (2015). Global Ocean Acidification Network: Requirements and governance plan. 2nd ed., GOA-ON. Acknowledgments: Data from the Point Wells ORCA mooring provided by W. Ruef and the UW Northwest Environmental Moorings Group. Thanks for B. Krueger, D. Hutchens, and D. Robinson from KCEL for all the field sampling. Thanks to the PMEL Carbon Group for lab sample analysis. Thanks to A. Fassbender for helpful discussion about impacts on total alkalinity and salinity relationship.

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Page 1: Methods and Challenges in Ocean Acidification Monitoring

Methods and Challenges in Ocean Acidification Monitoring in Puget Sound

KING COUNTY MARINE MONITORING

METHODS

WHAT ARE SOME CHALLENGES? WHY MONITOR OCEAN ACIDIFICATION? Ocean acidification (OA) refers to the process of oceans absorbing increasing CO2 from

the atmosphere, resulting in decreased pH and potentially corrosive conditions to

organisms like shellfish. In late 2015, the marine monitoring program at King County added

OA indicators in order to begin to understand baseline conditions and trends in in Central

Puget Sound (King County, 2015), and contribute to sound-wide efforts. This region can be

particularly vulnerable due to processes such as upwelling of high CO2 Pacific waters that

enter Puget Sound, as well as inputs of local nutrients and organic matter that can

potentially exacerbate the problem (Feely, et al., 2010). Also, pH is a key property due to

impact on rates of chemical reactions and thresholds of biological toxicity, such as

changing toxicity of ammonia to fish and crustaceans with changing pH, with higher

vulnerability at larval and juvenile stages (Eddy, 2005).

R/V Sound Guardian

King County Marine Monitoring Webpage and data access:

http://green2.kingcounty.gov/marine

Stephanie Jaeger King County Dept. of Natural Resources and Parks, Seattle, Washington

[email protected]

Offshore Waters

Sampled bi-weekly at

14 sites (monthly Jan &

Dec)

Full CTD profiles

(temperature, salinity,

density, DO,

fluorescence, PAR,

transmissivity, nitrate)

Discrete samples for

dissolved nutrients

(ammonia,

nitrate+nitrite, silica,

orthophosphate),TSS,

fecal indicator bacteria,

chlorophyll-a

Beach Waters

Sampled monthly

Analyzed for dissolved

nutrients, fecal

indicator bacteria,

temperature, and

salinity

Moorings

Near-surface depths

(1 to 10m) at 4 sites

Temperature, salinity,

dissolved oxygen,

fluorescence, turbidity,

and pH

SeaFET pH at 2 sites,

SUNA nitrate at one

site, Met station at two

sites

Discrete samples for

total alkalinity and

dissolved inorganic

carbon (DIC) at 2 sites

Phytoplankton

Sampled bi-weekly at

10 sites (monthly Jan

& Dec)

FlowCAM analysis of

10-300 µm size range

Species list for each

sample compiled by

microscopy Zooplankton

Sampled bi-weekly at

3 sites (monthly Jan &

Dec)

Full water column

vertical tows and

Bongo net tows

SUMMARY

In partnership with the UW Northwest Environmental Moorings and PMEL Carbon Groups, total alkalinity

and DIC collection and preservation methods were compared in August 2016 at the Point Wells ORCA

mooring, in order to ground truth an alternative method. Three treatments completed at three depths:

RESULTS

Mean and one std. deviation of total alkalinity and DIC results by

treatment method and depth (n = 3). No significant difference between

each method (p = 0.5 and 0.4; respectively); however, in general, more

variability is observed in the filtered and delayed poisoning method.

Salinity vs. measured total alkalinity for all samples (n=76). Red dots are from a nearshore site in inner

Quartermaster Harbor, near creek drainages. Blue triangles are from Pt. Williams and Pt. Wells in the

Central Basin. The black line represents the equation derived in the Fassbender study.

Components

currently used for

OA indicators

• In-situ moorings measure pH and

other variables at 15-minute

intervals.

• Total alkalinity and DIC collected

monthly supplement and quality

control pH data, analyzed by the

PMEL Carbon Group at NOAA

following the methods of Dickson et.

al (2007).

• King County Environmental Lab

prohibits use of mercury, so

alternative preservation is used.

• Samples filtered (0.45 µm) using a

peristaltic pump from a Niskin bottle,

following Bockmon and Dickson

(2014) methods, and later poisoned

with mercuric chloride at PMEL to

extend holding times.

• External pH data from the SeaFET

corrected with salinity, as internal pH

has been more susceptible to

biofouling

• Mooring pH is corrected by

calculated total pH (derived from

TA/DIC samples) if needed,

preferably during well-mixed

conditions (Bresnahan et. al, 2014).

Inner Quartermaster Harbor

on Vashon Island, one of the

OA monitoring sites.

Location of offshore marine program stations in the

Central Basin. OA monitoring sites are starred.

Retrieval of the

Quartermaster Harbor

SeaFET instrument.

Preparing the zooplankton

bongo net tow, pictured with

the CTD rosette.

I. Prior to characterizing long-term trends in pH such as due to processes like ocean acidification, it is

important to understand the uncertainty of pH measurements and the variability on short time scales, such

due to interplay of photosynthesis and respiration.

Accurately measuring pH is limited by (Bresnahan, et al., 2014).:

• Initial calibration approach and quality of validation samples

• Sensor performance, conditioning and drift

• Quality of auxiliary measurements (e.g. temperature and salinity)

II. In order to better understand OA dynamics and ecosystem impacts, it is important to measure other

carbonate parameters besides pH alone (Newton, et al., 2015). The biological process of shell formation of

organisms like shellfish is related to the aragonite saturation state (ΩAragonite). Values less than one indicate

this mineral has a higher potential to dissolve, with some variability based on species and habitat distribution.

E.g., the concentration of human-caused CO2 has been linked to the dissolution of one species zooplankton

(pteropods) off the Pacific coast (Feely et al., 2016). In order to derive ΩAragonite, at least two properties of the

carbonate system must be characterized.

OBJECTIVE 1: HOW DO ALTERNATIVE SAMPLE PRESERVATION

METHODS COMPARE?

OBJECTIVE 2: CAN SALINITY BE USED TO EMPIRICALLY DERIVE TOTAL

ALKALINITY IN CENTRAL PUGET SOUND?

OBJECTIVE 3: CAN THIS LEAD TO IMPROVEMENTS IN PH TIME

SERIES AND UNDERSTANDING CARBONATE DYNAMICS?

ORCA water column profiles at Pt. Well on 8/8/2016.

Solid lines show profiles after TA/DIC water sampling;

dotted lines show earlier profiles. Green diamonds

show discrete salinity results and sample depths.

1) No filter and samples immediately poisoned

with HgCl2 after collection (most common

method)

2) Filtered (0.45 µm) and 24-hour delay in

poisoning with HgCl2 upon arrival at PMEL lab

(King County method)

3) Filtered and immediately poisoned with HgCl2

Results: All methods fall within ± 2 µmol/kg specification for both DIC and total alkalinity, with the exception

of the 90-m total alkalinity samples with the filtered and delayed treatment (± 4 µmol/kg). The relative std.

deviation for all samples is < 0.2%. Organic matter can contribute to alkalinity, and may lead to some

differences between the filtered and unfiltered samples, though not significantly shown here. • If possible, best to directly measure at least two properties of the carbonate system to

understand ocean acidification (OA)

• In lieu of a 2nd carbonate property, it is possible to empirically derive other OA indicators, as

long as measurement errors are minimal and data are carefully quality controlled and

validated with water samples

• The alternative filtration method may be used, as long as samples are preserved with HgCl2 in

a reasonable timeframe. Replicate samples are recommended for better accuracy.

• Further work is needed prior to using a different preservative such as ZnCl2

• Empirically-derived total alkalinity results support the Fassbender study (2016) but further

stresses the need for a different calculation at low salinities (<26 PSU)

• More work is needed in order to successfully predict aragonite saturation state in Central

Puget Sound, with the goal of using as a gauge of ocean acidification impacts to local species

and ecosystems

REFERENCES

Only one in-situ carbonate variable (pH) is currently measured, so exploring whether a 2nd variable can be

derived is central to understanding OA dynamics like aragonite saturation state. All of King County’s discrete

salinity results are compared to total alkalinity (TA) samples analyzed by PMEL, and compared to the empirical

salinity/TA relationship shown by Fassbender et. al (2016).

Results: This comparison follows a similar pattern to the Fassbender study, where the tightest relationship

between salinity and TA occurs at salinities > 26 PSU. This suggests the need for development of a stepwise

relationship for lower salinities commonly found in Puget Sound. Also, the median residual between measured TA

and empirical TA for the higher salinity samples is -14 µmol/kg, which may be attributed to different collection

methods, where filtration can remove some of the organic alkalinity component to TA.

Residuals are

calculated from

measured TA minus

empirically-derived

TA, where negative

values indicate that

the measurements

are lower than

predication by the

TA/S relationship.

Dotted lines show

± 2σ for all data.

Beach site on Vashon Island, looking over Puget Sound (S. Jaeger) King County’s Point Williams monitoring buoy in Central Puget Sound near Lincoln Park

Example of time series at Point Williams mooring (1m) from Sept. – Nov.

2016. Temperature, salinity, and DO are from a YSI 6600 V2 sonde co-

located with a SeaFET instrument. In the bottom panel, Ωaragonite (blue) Is

empirically derived from external pH and salinity. Error bounds (pink) are

calculating assuming a combined error up to ±0.02 pH and ±30 µmol/kg

total alkalinity uncertainties.

Zooming in to one-week of the time series at Point Williams in

mid-October, when multiple methods were used for pH water

sample analysis on Oct. 18. External pH (salinity corrected) falls

within 0.02 pH of all the water samples, while internal pH has

drifted out of spec, likely due to biofouling. Note also the large

error bounds in derived Ωaragonite.

.

Data collected at 15-minute intervals at moorings is helpful for

understanding temporal dynamics in the carbonate system,

where daily and seasonal swings in pH can far exceed

changes in long-term trends. One goal is to use existing data

to empirically calculate Ωaragonite, an ecologically-relevant OA

indicator.

Results: Initial results capture fluctuations and patterns in pH

and Ωaragonite over time; however, more work is needed to

understand uncertainties in these relationships. For example,

a measurement error of -0.02 pH and -30 µmol/kg TA leads

to close to 0.1 Ωaragonite error, which could push the

calculation below the threshold of 1, and may not represent

natural conditions.

• Bockmon & Dickson (2014). Limnol. and Oceanogr: Methods, 12, 191-195.

• Bresnahan, Martz, Takeshita, Johnson, & LaShomb. (2014). Methods in Oceanography, 9, 44

- 60.

• Dickson, Sabine, & Christian (Eds.). (2007). PICES Special Publication 3:191.

• Eddy. (2005). Review, J. of Fish Biology, 67(6), 1495-1513.

• Fassbender, Alin, Feely, Sutton, Newton, & Byrne (2016). Estuaries and Coasts, 1-15.

• Feely, Alin, Newton, Sabine, Warner, Devol, et al. (2010). Estuarine, Coastal and Shelf

Science, 88, 442-449.

• Feely, Alin, Carter, Bednarsek, Hales, Chan, Hill, et. al (2016). Estuarine, Coastal and Shelf

Science,183, 260-270.

• Newton, Feely, Jewett, Williamson, & Mathis. (2015). Global Ocean Acidification Network:

Requirements and governance plan. 2nd ed., GOA-ON.

Acknowledgments: Data from the Point Wells ORCA mooring provided by W. Ruef and the UW Northwest Environmental Moorings

Group. Thanks for B. Krueger, D. Hutchens, and D. Robinson from KCEL for all the field sampling. Thanks to the PMEL Carbon Group for

lab sample analysis. Thanks to A. Fassbender for helpful discussion about impacts on total alkalinity and salinity relationship.