methods to analyse the economic benefits of a pharmacogenetic (pgt) test to predict response to...
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![Page 1: Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test to Predict Response to Biologic Therapy in Rheumatoid Arthritis, and to Prioritise](https://reader036.vdocuments.net/reader036/viewer/2022062421/56649d445503460f94a21681/html5/thumbnails/1.jpg)
Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test
to Predict Response to Biologic Therapy in Rheumatoid Arthritis,
and to Prioritise Further Research
Alan Brennan1, Nick Bansback1, 1ScHARR, University of Sheffield, England.
Kip Martha2, Marissa Peacock2, Kenneth Huttner2
2Interleukin Genetics, Inc.
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“Biologics”Anakinra ($12,697), Etanercept ($18,850), Infliximab ($24,112)*
*Costs include monitoringAnakinra 100mgEtanercept 25mg eowInfliximab 3mg/kg 8 weekly
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“Biologics”Anakinra ($12,697), Etanercept ($18,850), Infliximab ($24,112)*
Cytokines
Interleukin 1 TNF alpha TNF Alpha
*Costs include monitoringAnakinra 100mgEtanercept 25mg eowInfliximab 3mg/kg 8 weekly
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“Biologics”Anakinra ($12,697), Etanercept ($18,850), Infliximab ($24,112)*
Is Response Genetic?
91 patients, 150mg Anakinra, 24 week RCT1,2, gene = IL-1A +4845Positive response = reduction of at least 50% in swollen joints
1 Camp et al. American Human
Genetics Conf abstract 1088, 1999
2 Bresnihan
Arthritis & Rheumatism, 1998
*Costs include monitoringAnakinra 100mgEtanercept 25mg eowInfliximab 3mg/kg 8 weekly
![Page 5: Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test to Predict Response to Biologic Therapy in Rheumatoid Arthritis, and to Prioritise](https://reader036.vdocuments.net/reader036/viewer/2022062421/56649d445503460f94a21681/html5/thumbnails/5.jpg)
“Biologics”Anakinra ($12,697), Etanercept ($18,850), Infliximab ($24,112)*
Is Response Genetic?
24 week RCT1,2 , 91 patients, 150mg Anakinra,, gene = IL-1A +4845Defined response = reduction of at least 50% in swollen joints
1 Camp et al. American Human
Genetics Conf abstract 1088, 1999
2 Bresnihan
Arthritis & Rheumatism, 1998
*Costs include monitoringAnakinra 100mgEtanercept 25mg eowInfliximab 3mg/kg 8 weekly
![Page 6: Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test to Predict Response to Biologic Therapy in Rheumatoid Arthritis, and to Prioritise](https://reader036.vdocuments.net/reader036/viewer/2022062421/56649d445503460f94a21681/html5/thumbnails/6.jpg)
“Biologics”Anakinra ($12,697), Etanercept ($18,850), Infliximab ($24,112)*
Is Response Genetic?
91 patients, 150mg Anakinra, 24 week RCT1,2, gene = IL-1A +4845Positive response = reduction of at least 50% in swollen joints
1 Camp et al. American Human
Genetics Conf abstract 1088, 1999
2 Bresnihan
Arthritis & Rheumatism, 1998
0%
20%
40%
60%
80%
100%
Placebo Anakinra Gene+ve
Gene -ve
% a
ch
iev
ing
"S
wo
llen
50
"
0 .0 %
1 0 .0 %
2 0 .0 %
3 0 .0 %
4 0 .0 %
5 0 .0 %
6 0 .0 %
7 0 .0 %
8 0 .0 %
9 0 .0 %
1 0 0 .0 %
*Costs include monitoringAnakinra 100mgEtanercept 25mg eowInfliximab 3mg/kg 8 weekly 50% 50%100%
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Health Outcomes• ACR20 response
-20% in swollen, and tender joints, and in 3 other measures
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Health Outcomes• ACR20 response
-20% in swollen, and tender joints, and in 3 other measures
ACR20 = 0.88 * Swollen50 score (trial data)
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Health Outcomes• ACR20 response
-20% in swollen, and tender joints, and in 3 other measures
ACR20 = 0.88 * Swollen50 score (trial data)
Response ==> symptom relief and delayed progression long term
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Health Outcomes• ACR20 response
-20% in swollen, and tender joints, and in 3 other measures
ACR20 = 0.88 * Swollen50 score (trial data)
Response ==> symptom relief and delayed progression long term
• “Years in ACR20 Response” = primary outcome
3 Kobelt et al. Economic Conseque of Progression of RA in Swe. A&R 1999
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Health Outcomes• ACR20 response
-20% in swollen, and tender joints, and in 3 other measures
ACR20 = 0.88 * Swollen50 score (trial data)
Response ==> symptom relief and delayed progression long term
• “Years in ACR20 Response” = primary outcome• ACR 20 Response 0.8 reduction in HAQ (0 to 3 scale)
• Utility 0.86 - 0.2 * HAQ 3
3 Kobelt et al. Economic Conseque of Progression of RA in Swe. A&R 1999
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Existing Uncertainty
0%
20%
40%
60%
80%
100%
Placeb
o
Anakin
ra
Gene
+ve
Gene
-ve
Etane
rcep
t
Inflix
imab
% a
chie
vin
g A
CR
20
0 .0 %
1 0 .0 %
2 0 .0 %
3 0 .0 %
4 0 .0 %
5 0 .0 %
6 0 .0 %
7 0 .0 %
8 0 .0 %
9 0 .0 %
1 0 0 .0 %
50% 50%
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2 Year Treatment Sequence Pathway
• Initial Response Longer term discontinuation
AE or AE or lose efficacy?
Respond? No Drug 1 …..
Yes Drug 1
Yes Drug 2 …..
Drug 1
Respond?
Yes Drug 2 …..
No Drug 2
No Drug 3 …..
0 - 6 months 6 - 12 months 12-18 months
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Respond ?
Gene +ve? Yes …..
Yes Anakinra
No …..
PGt
Respond?
Yes …..
No Etanercept
No …..
Respond?
Yes
Anakinra
No
Before 0 - 6 months
Before 0 - 6 months
A Pharmaco-Genetic Strategy
Strategy 1
Strategy 2
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Strategy Sequences to Compare
A AnakinraPGt GeneticE EtanerceptI Infliximab-
Maintenance
1st 2nd 3rd 4thPGt sister strategy
1 PGt - - - 32 A - - -3 E - - -4 I - - -5 E A - -6 I A - -7 E I - -8 I E - -9 PGt E - - 7
10 PGt I - - 811 A E - -12 A I - -13 A E I -14 A I E -15 E I A -16 E A I -17 I E A -18 I A E -19 PGt E I - 720 - - - -
1
2
3
0
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Existing Uncertainty (2)
0%
20%
40%
60%
80%
100%
Anakin
ra
Gene
+ve
Gene
-ve
Etane
rcep
t
Inflix
imab
E afte
r I
E afte
r A
I afte
r E
I afte
r A
A afte
r E
A afte
r I% a
ch
iev
ing
AC
R2
0
0 .0 %
1 0 .0 %
2 0 .0 %
3 0 .0 %
4 0 .0 %
5 0 .0 %
6 0 .0 %
7 0 .0 %
8 0 .0 %
9 0 .0 %
1 0 0 .0 %
Trials Sequence "priors"
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Cost Assumptions• Drugs and Monitoring
• Other Healthcare HAQ$Cost pa = $1,084 + $1,636 * HAQ 4
==> Responder = $ 2,400 pa Non Responder = $ 3,700 pa
• PGt = $200
• Excluding :Nursing Home Care, Employer Costs• No uncertainty analysis
4 Yelin and Wanke . A&R 1999………...
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2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
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2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters
![Page 20: Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test to Predict Response to Biologic Therapy in Rheumatoid Arthritis, and to Prioritise](https://reader036.vdocuments.net/reader036/viewer/2022062421/56649d445503460f94a21681/html5/thumbnails/20.jpg)
2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters1) Simulate data collection:
![Page 21: Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test to Predict Response to Biologic Therapy in Rheumatoid Arthritis, and to Prioritise](https://reader036.vdocuments.net/reader036/viewer/2022062421/56649d445503460f94a21681/html5/thumbnails/21.jpg)
2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters1) Simulate data collection: • sample parameter(s) of interest once ~ prior • (1st level)
![Page 22: Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test to Predict Response to Biologic Therapy in Rheumatoid Arthritis, and to Prioritise](https://reader036.vdocuments.net/reader036/viewer/2022062421/56649d445503460f94a21681/html5/thumbnails/22.jpg)
2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters1) Simulate data collection: • sample parameter(s) of interest once ~ prior • decide on sample size (ni) (1st level)
![Page 23: Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test to Predict Response to Biologic Therapy in Rheumatoid Arthritis, and to Prioritise](https://reader036.vdocuments.net/reader036/viewer/2022062421/56649d445503460f94a21681/html5/thumbnails/23.jpg)
2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters1) Simulate data collection: • sample parameter(s) of interest once ~ prior • decide on sample size (ni) (1st level)• sample a mean value for the simulated data | parameter of interest
![Page 24: Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test to Predict Response to Biologic Therapy in Rheumatoid Arthritis, and to Prioritise](https://reader036.vdocuments.net/reader036/viewer/2022062421/56649d445503460f94a21681/html5/thumbnails/24.jpg)
2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters1) Simulate data collection: • sample parameter(s) of interest once ~ prior • decide on sample size (ni) (1st level)• sample a mean value for the simulated data | parameter of interest
![Page 25: Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test to Predict Response to Biologic Therapy in Rheumatoid Arthritis, and to Prioritise](https://reader036.vdocuments.net/reader036/viewer/2022062421/56649d445503460f94a21681/html5/thumbnails/25.jpg)
2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters1) Simulate data collection: • sample parameter(s) of interest once ~ prior • decide on sample size (ni) (1st level)• sample a mean value for the simulated data | parameter of interest 2) combine prior + simulated data --> simulated posterior
![Page 26: Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test to Predict Response to Biologic Therapy in Rheumatoid Arthritis, and to Prioritise](https://reader036.vdocuments.net/reader036/viewer/2022062421/56649d445503460f94a21681/html5/thumbnails/26.jpg)
2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters1) Simulate data collection: • sample parameter(s) of interest once ~ prior • decide on sample size (ni) (1st level)• sample a mean value for the simulated data | parameter of interest 2) combine prior + simulated data --> simulated posterior 3) now simulate 1000 times
parameters of interest ~ simulated posteriorunknown parameters ~ prior uncertainty (2nd level)
![Page 27: Methods to Analyse The Economic Benefits of a Pharmacogenetic (PGt) Test to Predict Response to Biologic Therapy in Rheumatoid Arthritis, and to Prioritise](https://reader036.vdocuments.net/reader036/viewer/2022062421/56649d445503460f94a21681/html5/thumbnails/27.jpg)
2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters1) Simulate data collection: • sample parameter(s) of interest once ~ prior • decide on sample size (ni) (1st level)• sample a mean value for the simulated data | parameter of interest 2) combine prior + simulated data --> simulated posterior 3) now simulate 1000 times
parameters of interest ~ simulated posteriorunknown parameters ~ prior uncertainty (2nd level)
4) calculate best strategy = highest mean net benefit
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2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters1) Simulate data collection: • sample parameter(s) of interest once ~ prior • decide on sample size (ni) (1st level)• sample a mean value for the simulated data | parameter of interest 2) combine prior + simulated data --> simulated posterior 3) now simulate 1000 times
parameters of interest ~ simulated posteriorunknown parameters ~ prior uncertainty (2nd level)
4) calculate best strategy = highest mean net benefit 5) Loop 1 to 4 say 1,000 times Calculate average net benefits
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2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters1) Simulate data collection: • sample parameter(s) of interest once ~ prior • decide on sample size (ni) (1st level)• sample a mean value for the simulated data | parameter of interest 2) combine prior + simulated data --> simulated posterior 3) now simulate 1000 times
parameters of interest ~ simulated posteriorunknown parameters ~ prior uncertainty (2nd level)
4) calculate best strategy = highest mean net benefit 5) Loop 1 to 4 say 1,000 times Calculate average net benefits 6) EVSI parameter set = (5) - (mean net benefit | current information)
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2 Level EVSI - Research Design4, 5
4 Brennan et al Poster
SMDM 2002
5 Brennan et al Poster
SMDM 2002
0)Decision model, threshold, priors for uncertain parameters1) Simulate data collection: • sample parameter(s) of interest once ~ prior • decide on sample size (ni) (1st level)• sample a mean value for the simulated data | parameter of interest 2) combine prior + simulated data --> simulated posterior 3) now simulate 1000 times
parameters of interest ~ simulated posteriorunknown parameters ~ prior uncertainty (2nd level)
4) calculate best strategy = highest mean net benefit 5) Loop 1 to 4 say 1,000 times Calculate average net benefits 6) EVSI parameter set = (5) - (mean net benefit | current information) )NB(d,max|)NB(d,max EEE
di
dX i
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4 strategies: A, E, I and PGt
Results - 6 months
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4 strategies: A, E, I and PGt
Results - 6 months
A PGt E I6 month Cost $6,349 $8,087 $9,425 $12,056 % Responder 43% 63% 71% 50%Cost per Resp $14,764 $12,755 $13,275 $24,112
Cost per Responder
$0
$5,000
$10,000
$15,000
$20,000
$25,000
$30,000
A PGt E I
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4 strategies: A, E, I and PGt
Results - 6 months
A PGt E I6 month Cost $6,349 $8,087 $9,425 $12,056 % Responder 43% 63% 71% 50%Cost per Resp $14,764 $12,755 $13,275 $24,112
Cost per Responder
$0
$5,000
$10,000
$15,000
$20,000
$25,000
$30,000
A PGt E I
Incremental Cost per Responder Year Gained
$8,521 $10,987$17,608
$81,534
PGt DOM$0
$20,000
$40,000
$60,000
$80,000
$100,000
PGt v A
E v A
E v PGt
I v P
GtI v
A
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20 strategies: A, E, I and PGt sequences
Base-case Results - 2 years
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20 strategies: A, E, I and PGt sequences
Optimal Strategy Depends on Threshold:$10k ==> maintenance therapy (20)$20k ==> sequence of 2 biologics (11)$25k ==> PGt + 2 biologics (9) $30k ==> PGt + 3 biologics (19)
Base-case Results - 2 years
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20 strategies: A, E, I and PGt sequences
Optimal Strategy ProbDepends on Threshold: Optimal$10k ==> maintenance therapy (20) 100%$20k ==> sequence of 2 biologics (11) 42%$25k ==> PGt + 2 biologics (9) 18%$30k ==> PGt + 3 biologics (19) 43%
Base-case Results - 2 years
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Incorporating Uncertainty
• Assuming 25,000 per annum new patients starting biologics over next 5 years
Overall EVPI
$0 $0
$99$116
$138
$178
$0
$50
$100
$150
$200
$0 $10k $20k $30k $40k $50kCost per Responder Year Threshold
$million
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Partial EVPI: Key Uncertainties
$0
$10
$20
$30
$40
$50
$10 $15 $20 $25 $30 $35 $40 $45 $50
Threshold ($ 000)
EV
PI
($m
)
PGt response
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Partial EVPI: Key Uncertainties
$0
$10
$20
$30
$40
$50
$10 $15 $20 $25 $30 $35 $40 $45 $50
Threshold ($ 000)
EV
PI
($m
)
E,I after anybiologic
TNF afterAnakinra
1st Line E,I,A
TNF crossover
Anakinra afterTNF
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Partial EVSI: PGt Research onlyEVSI for PGt Research only
(for threshold = $20,000 per responder year gained)
$0.0$5.0
$10.0$15.0$20.0$25.0$30.0
10 20 50 100
200
500
1000
2000
5000
Perfe
ct
Sample Size
EV
SI
$m
Caveat: Small No.of Simulations on 1st Level
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Interleukin Genetics Inc. TARGET RA program
• Conceptual modelling identified key missing data and helped prioritise further primary data collection
1. PGt test performance (increased sample size).2. Etanercept / Infliximab performance in gene
subgroups3. Anakinra response rate in anti-TNFα failures
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Partial EVPI: TARGET RA Program
$0
$10
$20
$30
$40
$50
$60
$10 $15 $20 $25 $30 $35 $40 $45 $50
Threshold ($ 000)
EV
PI
($m
)
TARGET RA
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Conclusions• Early economic evaluation suggests potential for
a cost-effective pharmacogenetic test.
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Conclusions• Early economic evaluation suggests potential for
a cost-effective pharmacogenetic test.
• Expected value of information analysis has quantified the key research priorities.
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Conclusions• Early economic evaluation suggests potential for a
cost-effective pharmacogenetic test.
• Expected value of information analysis has quantified the key research priorities.
• EVSI can quantify the value of the specific research design