microbiology 1 (micr v01) summer 2010 sec. 50284 lecture: dr. marta d. de jesus (ph.d.)

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Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.) TuWTh 3:00 - 5:50 PM (SCI-313) Lab: Prof. Eden Bellenson TuWTh 12:00 - 2:50 PM (SCI-311) Please pick up all handouts.

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Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.) TuWTh 3:00 - 5:50 PM (SCI-313) Lab: Prof. Eden Bellenson TuWTh 12:00 - 2:50 PM (SCI-311) Please pick up all handouts. Introduction What is MICR V01? Nuts & bolts Roll Syllabus Comments - PowerPoint PPT Presentation

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Page 1: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Microbiology 1 (MICR V01)Summer 2010

Sec. 50284

Lecture: Dr. Marta D. de Jesus (Ph.D.)

TuWTh 3:00 - 5:50 PM (SCI-313)

Lab: Prof. Eden Bellenson

TuWTh 12:00 - 2:50 PM (SCI-311)

Please pick up all handouts.

Page 2: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

IntroductionWhat is MICR V01? Nuts & bolts

RollSyllabusComments

Helps & Hints

Page 3: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

College Website

http://www.venturacollege.edu

Your District Website:

http://my.vcccd.edu

Page 4: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Course Syllabus

A. COURSE DESCRIPTION

B. METHOD OF INSTRUCTION

C. STUDENT LEARNING OBJECTIVES

D. COURSE OBJECTIVES

E. COURSE TOPICS/UNITS

F. CORE COMPETENCIES

G. TEXTBOOK(S) AND REQUIRED SUPPLIES

Page 5: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Who is this class for?

Nursing: RN and beyond (BSN, MSN, PhD)

other pre-health: PharmD, OD, PA, etc. (possibly DVM)

other interests (bioengineering, chemical engineering, biotechnology, etc.)

Note: not usually recommended for MD or DO (not accepted as units by medical schools in general) or Microbiology majors.

Page 6: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Pre-requisites for Microbiology

CHEM V20 & V20L/V30 or V30 L/V 01 & V01L (requires beg. algebra) AND

PHSO V01 (requires ANAT V01 which requires BIOLV 01 & V01L) or BIOL V04

What topics did you get from those courses that you will use here?

Scientific method Metric system & conversions Subatomic particles, periodic table, element descriptions , chemical symbols & formulas Acids, bases/alkalis & buffers

Basic microscopy Prokaryotic & eukaryotic cells (plant & animal) Cell division Biological molecules (carbohydrates, lipids, proteins, nucleic acids)

Basic enzyme function DNA replication, RNA transcription & protein synthesis

Glycolysis, aerobic respiration, photosynthesis Basic taxonomy

Human anatomy & physiology (including an intro to the immune system)

If you don’t remember or are shaky on a number of these, this class will be very difficult.

Page 7: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Textbook

Also available:

1) CD-ROM & access to microbiologyplace website (comes with new texts or go to publisher website to purchase)

2) Study Guide (optional)

Page 8: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Course Syllabus

H. GRADING PLAN (p3)

(lecture %).75 + (lab %).25 = final %

Guaranteed grades

90-100% -> A

80-89% -> B

70-79% -> C

60-69% -> D

Below -> F

Page 9: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Course Syllabus

I. COURSE COMPONENT SPECIFICS

Quizzes: 10% (daily)

Lecture Tests: 40% (weekly)

Lecture Final: 25%

Please sit in the front half of the classroom for these

Lab: 25%

Page 10: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

For Tests: 883

For Quizzes: 815

Page 11: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

For Final Exam: 886

Page 12: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Course Syllabus

J. CLASSROOM RULES OF CONDUCT

http://www.venturacollege.edu/honesty/

1) Academic Dishonesty

2) Disruption/Obstruction of class

K. Some of the On-Campus Student Help

pg 29 & 49 Sched. Of Classes

http://www.assist.org

L. EMERGENCY PROCEDURES

Page 13: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Course Syllabus

M. Other miscellaneous helps

DISCLAIMER

Bloom’s Taxonomy (types of questions on college exams) p7

N. PLANNED SCHEDULE

AFFIDAVIT & Student Information Sheet - due tomorrow

Page 14: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

IntroductionWhat is MICR V01? Nuts & bolts

RollSyllabusComments

Helps & Hints

Page 15: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Learning preferences/styles - 4 popular models

So what works? Everyone can/does use these different modes

VA(R)K (sensory)

Kolb

Sternberg

Page 16: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Dale’s Cone of Experience-

the more you’re involved, the more you get

Page 17: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Guaranteed: S+Q+3R+P Method of Studying

Survey

Question

Read

Recite

Review

PracticeHitch?

Page 18: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

IntroductionWhat is Microbiology?

Page 19: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Microbes are:

1. small

Page 20: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Microbes are:

1. small

Page 21: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Microbes are:

1. small

16,600x

(when image is 2 in x 2 in)

Page 22: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Microbes are:

1. small

2. ubiquitous

Page 23: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Microbes are:

1. small

2. ubiquitous

3. ecologically important

Page 24: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Microbes are:

1. small

2. ubiquitous

3. ecologically important

4. medically important

trypanosomes

antibiotics

Page 25: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Microbes are:

1. small

2. ubiquitous

3. ecologically important

4. medically important

5. economically important

Page 26: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Microbes are:

1. small

2. ubiquitous

3. ecologically important

4. medically important

5. economically important

6. often beneficial

probiotics

bioremediation

Page 27: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

& microbial ecology

(molecular biology)

(algology)

(More general: protistology)

(All kingdoms except plants)

Page 28: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)
Page 29: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

What is Science?sciens (Latin)1. process/method

Page 30: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

What is Science?sciens (Latin)1. process/method2. information

Page 31: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

What is not Science? examplesArt LiteraturePhilosophyTheology/Religion

(and some subjects are in between…)

Page 32: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Scientific Method

Page 33: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

In every experiment should have 2 groups:

experimental

control

In lab, sometimes have 2 kinds of controls:

positive

negative

Page 34: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Big Moments in the History of Microbiology

A. Diseases & microbes

1. ancient explanations, transmission

2. fermentation

3. spontaneous generation disproved (Aristotle, Redi, Needham, Spallanzani, Pasteur)

4. (in)famous diseases

a. Plague of Athens (430-25 B.C.E)

b. Black Plague (1348- outbreaks until 16th Cent. )

c. syphilis (~1500?)

d. Spanish Flu (1918)

e. HIV -> AIDS (late 20th Cent.-?)

Page 35: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

People from text (before 1850)

Robert Hooke (1665)Antoni von Leeuwenhoek (1674)Francesco Redi (1668)Carolus Linnaeus (= Carl von Linne; 1735)John Needham (1745)Lazzaro Spallanzani (1765)Edward Jenner (1789)Theodor Schwann & Matthei Schleiden (1839)Ignaz Semmelweiss (1844)

After ~1855: Golden Age of Microbiology (some say 1857-1914)

Page 36: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Florence Nightingale (1854-6) Walter Reed (1900)John Snow (1854) Paul Ehrlich (1908)Rudolf Virchow (1858) Emil von Behring & Shibasaburo Kitasato

*Louis Pasteur (1857)* Albert Kluyver & C. B. van NielSergei Winogradsky (1885-8) Alexander Fleming (1928)Eduard Buchner (1897) Gerhard Domagk (1935)Joseph Lister (1865) Oswald Avery/Colin MacLeod/Maclyn McCarty (1944)

*Robert Koch (1876)* George Beadle & Edward Tatum (1958)Charles Laveran (1880) Linus Pauling (1965) Christian Gram (1884) Carl Woese (1977)Julius Richard Petri (1887)Dmitri Iwanoski (1892)Martinus Beijerink (1898)

http://www.microbeworld.org/index.php?option=com_content&view=category&layout=blog&id=64&Itemid=61

Page 37: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

The 1950’s: electron microscopes

TEM

SEM

Page 38: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Emerging & re-emerging infectious diseases (EIDs)

http://www.niaid.nih.gov/topics/emerging/pages/list.aspx

Page 39: Microbiology 1 (MICR V01) Summer 2010 Sec. 50284 Lecture: Dr. Marta D. de Jesus (Ph.D.)

Are we in the 2nd Golden Age of Microbiology?

Many say “yes”

- Most of modern biotechnology uses microbiology or techniques first developed with microbes.

- We know more about microbes now than ever before & the information is accelerating…

Example: We now know the entire DNA coding for more than many different bacterial species & more are being added all the time.

The first bacteria to be completely DNA sequenced was Haemophilus influenzae (1995, after many years of work). We now have labs that complete equivalent work in a few months (note: making a vaccine or drug takes far, far longer).