milestone ms6 work package 2, milestone 6: engagement …...a virtual research environment to...

9
Milestone MS6 Work Package 2, Milestone 6: Engagement plan Outline plan and schedule for engagement approved and published on the website. Work Package 2, Task 2.3 Dissemination and outreach Engaging all sectors from the public to research specialists and communicating the power of a virtual research environment to provide a seamless resource for the management, analysis, interpretation, archiving and protection of data acquired from structural biology methods (Objective 2.3). Engagement Plan In agreement with WP2 of the Technical Annex, plans of actions for the engagement with different communities have been outlined, as detailed in the sections below. This allowed to define the “Engagement plan” reported in Appendix 1. This plan is published in the West-Life web site, and will be continuously updated. Engagement with the structural biology community West-Life VRE provides a platform offering variety of services and information on the services. Having an overview of experiments performed through an operational pipeline accessing different facilities in sequence would be extremely beneficial for the already well- informed community. This can be further publicised by West-Life presence at structural biology conferences, workshops and meetings. Flyers (Appendix 3), presentations and posters at external meetings have already been made and will be continued. The project website has news items that is updated with the latest structural biology happenings and is linked to the Structural Biology Research Infrastructure (Instruct). The project website also has an overview of the latest events in the community thus promoting collaboration and further engagement. Embracing the social networks, West-Life has an active twitter account which is in constant interaction with the different partners in the community. West-Life will also have a LinkedIn page, thus helping the community in facilitating movement of talents and jobs in the network. Action points Continued presence of West-Life at conferences and distribution of flyers, brochures etc. o Participants of the project, attending conferences/workshops, are strongly encouraged to use West-Life logos, namecheck project partners and distribute business cards. LinkedIn page with all the details Addition of West-Life in the Instruct networks, thus providing a forum where people from different communities can interact Continued update of project website with news and events

Upload: others

Post on 21-May-2020

3 views

Category:

Documents


0 download

TRANSCRIPT

Page 1: Milestone MS6 Work Package 2, Milestone 6: Engagement …...a virtual research environment to provide a seamless resource for the management, analysis, interpretation, archiving and

MilestoneMS6WorkPackage2,Milestone6:EngagementplanOutlineplanandscheduleforengagementapprovedandpublishedonthewebsite.WorkPackage2,Task2.3DisseminationandoutreachEngagingallsectorsfromthepublictoresearchspecialistsandcommunicatingthepowerofavirtualresearchenvironmenttoprovideaseamlessresourceforthemanagement,analysis,interpretation,archivingandprotectionofdataacquiredfromstructuralbiologymethods(Objective2.3).

EngagementPlanInagreementwithWP2oftheTechnicalAnnex,plansofactionsfortheengagementwithdifferentcommunitieshavebeenoutlined,asdetailedinthesectionsbelow.Thisallowedtodefinethe“Engagementplan”reportedinAppendix1.ThisplanispublishedintheWest-Lifewebsite,andwillbecontinuouslyupdated.EngagementwiththestructuralbiologycommunityWest-LifeVREprovidesaplatformofferingvarietyofservicesandinformationontheservices.Havinganoverviewofexperimentsperformedthroughanoperationalpipelineaccessingdifferentfacilitiesinsequencewouldbeextremelybeneficialforthealreadywell-informedcommunity.ThiscanbefurtherpublicisedbyWest-Lifepresenceatstructuralbiologyconferences,workshopsandmeetings.Flyers(Appendix3),presentationsandpostersatexternalmeetingshavealreadybeenmadeandwillbecontinued.TheprojectwebsitehasnewsitemsthatisupdatedwiththelateststructuralbiologyhappeningsandislinkedtotheStructuralBiologyResearchInfrastructure(Instruct).Theprojectwebsitealsohasanoverviewofthelatesteventsinthecommunitythuspromotingcollaborationandfurtherengagement.Embracingthesocialnetworks,West-Lifehasanactivetwitteraccountwhichisinconstantinteractionwiththedifferentpartnersinthecommunity.West-LifewillalsohaveaLinkedInpage,thushelpingthecommunityinfacilitatingmovementoftalentsandjobsinthenetwork.Actionpoints

• ContinuedpresenceofWest-Lifeatconferencesanddistributionofflyers,brochuresetc.

o Participantsoftheproject,attendingconferences/workshops,arestronglyencouragedtouseWest-Lifelogos,namecheckprojectpartnersanddistributebusinesscards.

• LinkedInpagewithallthedetails• AdditionofWest-LifeintheInstructnetworks,thusprovidingaforumwherepeople

fromdifferentcommunitiescaninteract• Continuedupdateofprojectwebsitewithnewsandevents

Page 2: Milestone MS6 Work Package 2, Milestone 6: Engagement …...a virtual research environment to provide a seamless resource for the management, analysis, interpretation, archiving and

MilestoneMS6

• LeveragemailinglistswithineachpartnertosendcommunicationsandachievementsoftheVRE.Tableofmailinglistsandthemembersineachforumbelow.

Partner Mailinglistlink Numberof

registeredmembers

Contactperson

Instruct n/a(Contentmanagementsystem,usecontact)

4443 [email protected]

STFC http://www.jiscmail.ac.uk/lists/ccp4bb.html

6226 [email protected]

NKI-AVL PDB_REDOregisteredusers(onlyrestrictedmailinguntilamailinglistisadded)

>1000 [email protected]

EMBL newsletter >3000 MU CSIC 3DEMlist

(http://3dem.ucsd.edu/mailinglist.shtm)Scipionlist(https://lists.sourceforge.net/lists/listinfo/scipion-users)

[email protected]

CIRMMP ItalianChemicalSociety;Bio-NMRusersmailinglist

>2000 [email protected]

UU HADDOCKwebportalregisteredusers(onlyrestrictedmailingfornowuntilweimplementamechanismforuserstooptoutofthemailinglist)

>7700 [email protected]

WeNMR Newsitemscanbepostedonthewenmr.euwebsite

>2600 [email protected]

Luna INFN enmr.euVOusersmailinglist:enmr-

[email protected]>500 [email protected]

EngagementwithnewusercommunitiesWest-Life,throughitsparticipants,aredeeplyinvolvedinmultiplecollaborationswithotherBio-MedicalSciencesResearchInfrastructures(BMSRIs)throughdifferentprojectslikeCORBEL,BioExcel,RDAetc.Thishelpsinestablishingcontactswithnewusercommunities.

Page 3: Milestone MS6 Work Package 2, Milestone 6: Engagement …...a virtual research environment to provide a seamless resource for the management, analysis, interpretation, archiving and

MilestoneMS6Collaborations

Project Collaboratingpartners NatureofcollaborationResearchDataAlliance STFC,EUDAT OrganisationalmembersBioExcel UU ConsortiumpartnerAARC2 STFC,Instruct PartnersCORBEL EMBL,Instruct,CIRMMP,

CSICPartners

West-LifewillcontinuetointeractwithdifferentusercommunitiesthroughTwitterandothersocialnetworks.West-Lifewillcontinuetoberepresentedbyitspartnersinthemeetings,conferencesandworkshopswhichinvolvenewusercommunities,fromverydifferentscientificbackgrounds.EventswhereWest-Lifewasrepresented

Event Date EngagementComputationalBiotechnologyattheNanoscale,Faridabad,India

February15-202016 Workshop

14thInternationalSchoolofBiologicalMagneticResonance,Erice,Italy

7-17May2016 Talk

CECAMworkshop2016“StructuralandFunctionalAnnotationofBioinorganicSystems:PerspectivesandChallengesfromTheoryandExperiments",Pisa,Italy

23-25May2016 Talk

FEBS–IUBMBWorkshoponBiointeractomics,Seville,Spain

17-20May Talk

GordonResearchConferencesFrontiersofScience,lesDiablerets,Switzerland

26June-1July2016 Talk

EMBOGlobalExchangeLectureCourse,Suwon,Korea

19-26June2016 Talk

Euromar2016,Aarthus,Denmark

3-7July2016 Talk

27thInternationalConferenceonMagneticResonanceinBiologicalSystems,Kyoto,Japan

21-26August2016 Talk

Page 4: Milestone MS6 Work Package 2, Milestone 6: Engagement …...a virtual research environment to provide a seamless resource for the management, analysis, interpretation, archiving and

MilestoneMS658thRockyMountainConferenceonMagneticResonance(RMCMR),Colorado,USA

17-21July2016 Talk

XLVNationalCongressonMagneticResonance,Modena,Italy

5-7September2016 Talk

EMBOMeeting,Mannheim,Germany

September10-132016 Stand

DigitalInfrastructuresforEU,Krakow,Poland

September28–302016

Talk

pNMRandGIDRMsymposium"EuropemeetsItalywithparamagneticNMR",Venice,Italy

28September2016 Talk

JointInternationalConferenceoftheHeCrAandtheHSCCB,Athens,Greece

October7-92016 Talk

X-RayMethodsinStructuralBiology,ColdSpringHarbour,NY,USA

October10-152016 Workshop

iNEXTAllHandsMeeting,Madrid,Spain

October19-202016 Dedicationsession

Actionpoints

• Continuedpresenceatbroaderscopedmeetings,conferencesandotherevents• TechnicaldisseminationwithinfrastructureslikeEUDAT,EGIEngageetc.• Publishinginscientificjournalsofvariedreach• BuildbridgeswithotherVREprojectsandshareknowledge• RepresentationofWest-LifeinResearchGate

EngagementwithindustrialusersThefocusofengagementwiththeindustryshallbeontwolevels–asusersofVREservicesandasadvisersintailoringthedevelopments.Overdifferentyears,manyWest-LifepartnershaveforgedgoodrelationshipswithindustryandtheywillbeutilisedovertheperiodoftheprojectforthebenefitofWest-Life.Industrialconnections(throughcourses,workshopsetc.)

Contact TypeFirstI2PC-FEI“handson”courseonimageprocessingappliedtothestructuralcharacterizationofbiological

Course(October17-20,2016)

Page 5: Milestone MS6 Work Package 2, Milestone 6: Engagement …...a virtual research environment to provide a seamless resource for the management, analysis, interpretation, archiving and

MilestoneMS6macromolecules,Madrid,Spain(Partner:CSIC)ProposedEMCourseatDiamond,Oxford,UnitedKingdom

Course

West-Lifewillproduceanindustrytailoredwebsite.TheindustryspecificpagesofthewebsitewillhavedirectinformationofthetoolsandservicesofferedthroughWest-LifeVRE,informationontheleadingscientistsinvolvedintheprojectandclearinformationonhowtoaccesstheVRE.Thisisimportantbecausethereisdocumentedevidenceofcommunicationgapbetweenindustrialusersandserviceprovidersfromacademicbackgrounds.West-Lifewillalsotailorthecurrentflyerspecificallytotheindustrialcommunity.Theforesightmeetingplannedtoengagenewusercommunitieswillincludeusersfromindustrialsector.Actionpoints

• Continuedpresenceatconferencesinvolvingindustry• Tailoredwebsiteforindustrialcommunity• Industrytargetedflyer• Foresightmeetingwithdifferentpartnersandrepresentativesfromindustry

Engagementwithpolicymakersandnon-scientificcommunitiesEngagingwithpublicbodiesandpolicymakersareofbothcriticalandstrategicimportance.Aswellasprovidingbriefingnotesforpolicymakers,West-LifewillalsopublishinEuropeanpublicdisseminationforumslikeCORDIS.ProductionofbrochureswhichexplaintheimpactofVREinstructuralbiologyandstructuralbiologyingeneralinthedailylivesofpublicwouldbekey.SocialmediaoutletslikeTwitter,LinkedInetc.willbeutilisedinexplainingtheroleoftheVREinenablingsciencetacklingimportantscientificproblems.Actionpoints

• PublicationinCORDIS• PublicationoftheVREinMERIL• Brochureforpublic

Page 6: Milestone MS6 Work Package 2, Milestone 6: Engagement …...a virtual research environment to provide a seamless resource for the management, analysis, interpretation, archiving and

MilestoneMS6

Appendix

1. EngagementPlan

Item Medium Target

West-Lifenetworksinstructuralbiology.euwebpages

StructuralBiologyCommunityandNewcommunities

LinkedInGroup,perhapslinkedtoWeNMR

Web Newcommunitiesandpublic

Technicaldisseminationwithinfrastructures

ConferenceslikeDI4R Newcommunities

Publishinginjournals Web/Print Newcommunitiesandpublic

Webpagesspecificallyaddressingindustryusers

Web Industry

FlyertargetedtoIndustryusers

Flyer Industry

PublicationinCORDIS Web Policymakersandnewcommunities

PublicationofVREinMERIL Web Industryandnewcommunities

FutureeventswhereWest-Lifewillberepresented

Event Location Date Target

PSDI2016 Malmö,Sweden

November2016

Industry

DLS-CCP4DataCollectionandStructureSolutionWorkshop

Oxford,UnitedKingdom

December 13-20 2016

StructuralBiologyCommunity

CCP4StudyWeekend2017

Nottingham,UnitedKingdom

January92017

IndustryandStructuralBiologyCommunity

CCP4CrystallographySchoolandWorkshopatSPring-8

Japan January 2017

IndustryandStructuralBiologyCommunity

NECENI2PCCryo-EMschool

Leiden,Netherlands

Jan – Mar 2017

StructuralBiologyCommunity

Page 7: Milestone MS6 Work Package 2, Milestone 6: Engagement …...a virtual research environment to provide a seamless resource for the management, analysis, interpretation, archiving and

MilestoneMS610th«NMRatoolforBiology»meeting

Paris,France January30–February12017

StructuralBiologyCommunity

42ndLorneConferenceonProteinStructureandFunction

MantraLorne,Australia

February5-9,2017

StructuralBiologyCommunity

NGP-netWinterSchoolonExperimentalMethodsforProteinDisorder&Aggregation

Marseille,France

Februay13-172017

StructuralBiologyCommunity

InternationalSymposiumonGrids&Clouds2017

Taipei,Taiwan/ChineseTaipei

March5-102017

NewCommunities

MagneticMomentsin.CentralEurope(MMCE)

Budapest,Hungary

March8-122017

NewCommunities

ExperimentalNuclearMagneticResonanceConference

California,USA March26-31,2017

IndustryandNewCommunities

FEBSCombinedPracticalandLectureCourseChemistryofMetalsinBiologicalSystems

Belgium May52017 NewCommunities

InstructBiennialStructuralBiologyMeeting2017

Brno,CzechRepublic

May21-242017

StructuralBiologyCommunity

iNEXTAllHandsMeet Brno,CzechRepublic

May212017

StructuralBiologyCommunity

GRCComputationalAspectsofBiomolecularNMR

SundayRiverME,USA

June11-16,2017

Industryandnewcommunities

CCP4/APSSchoolinMacromolecularCrystallography

Argonne,USA June 2017 IndsutryandStructuralBiologyCommunity

BiophysicalSocietyThematicMeeting

Berlin,Germany

August 25-29 2017

StructuralBiologyCommunity

Page 8: Milestone MS6 Work Package 2, Milestone 6: Engagement …...a virtual research environment to provide a seamless resource for the management, analysis, interpretation, archiving and

MilestoneMS6PDBeAPI-searchandentryAPIWorkshop

StructuralBiologyCommunity

DrugDiscovery2017 2017 IndustryandNewcommunities

iNEXTtrainingcourseBridgingsolutionmethods:fromNMRtoX-rayscatteringandbiophysics

Patras,Greece 2017 StructuralBiologyCommunityandNewCommunities

2. Flyer

0101101011

1010110

111101

011011

01011101101

011101

0111011110

101011101011110101101011011010110111101011011011010111

011110101

0111010

101101

1101011

0101011110101

10111101011101101011010101011011010

0101101011010101010011011010101011010110101101

0101101011010101010011011010101011010110101101101

0101101011010101010011011010101011010110101

West-Life: your virtual research environment for structural biology

View all your data in a single, coherent place

West-Life is your portal to processing data in the cloud

Connect your processing together with a single portal

0101101011

1010110

111101

011011

01011101101

011101

0111011110

101011101011110101101011011010110111101011011011010111

011110101

0111010

101101

1101011

0101011110101

10111101011101101011010101011011010

0101101011010101010011011010101011010110101101

0101101011010101010011011010101011010110101101101

0101101011010101010011011010101011010110101

Visit: west-life.eu Tweet: @WestLifeSB

Science and Technology Facilities Council, United Kindgom

Netherlands Cancer Institute - Antoni van Leeuwenhoek Ziekenhuis (NKI AVL), Netherlands

European Molecular Biology Laboratory, Germany

Masarykova univerzita, Czech Republic

Agencia Estatal Consejo Superior de Investigaciones Cientificas, Spain

Consorzio Interuniversitario Risonanze Magnetiche di Metallo Proteine, Italy

Instruct Academic Services, United Kingdom

Universiteit Utrecht, Netherlands

LUNA, France

Istituto Nazionale di Fisica Nucleare, Italy

This project receives funding from the European Union’s Horizon 2020 research and innovation programme under grant

agreement No 675858.

Participants

West-Life is a H2020 Virtual Research Environment project (EINFRA No 675858) with 10 partners from 7 EU countries.

Page 9: Milestone MS6 Work Package 2, Milestone 6: Engagement …...a virtual research environment to provide a seamless resource for the management, analysis, interpretation, archiving and

MilestoneMS6

automated pipelines to process structural biology data

automated & integrated data management

cryo-EM

X-Ray

solid-state NMR

solution NMR

training on advanced computational solutions

in structural biology

cloud & grid resources

EPR SAXS

MS

FRET

Life Sciences in the Cloud

West-Life pilots an e-infrastructure for providing data services and tools for structural biology

West-Life is a Virtual Research Environment (VRE) through which users from the life science research community can access services and tools that will advance their research in the area of structural biology. The services made available will support experimental techniques such as X-ray, cryo-EM, NMR, SAXS and some biophysical techniques and provide the means to access more generic data services developed by EUDAT and the EGI. West-Life therefore makes integrated approaches to science more accessible and provides the IT infrastructure in support. West-Life builds on the strong foundations set up by WeNMR to serve the strong and growing community of European structural biologists under the umbrella of Instruct.

West-Life is developing a pilot infrastructure for storing and processing data that are obtained using combined techniques to achieve outcomes of higher impact.

West-Life allows structural biologists to fully leverage the available European computational infrastructures and services

West-Life aims to integrate existing data management services and develop new ones. Users will benefit from having an overview of experiments performed through an operational pipeline accessing different facilities in sequence, with appropriate data stores and data processing services. The history of a project will be captured through metadata that is automatically saved through each of the pipeline steps to track your processing and record the provenance of your results.

West-Life will improve structural biology research outcomes by integrating data from complementary techniques into an enriched dataset that may provide new insights and set new paradigms in important areas of life science research.

Integrate computational tools

Integrate data management facilities

Enable provision of new data services