mycorrhizal fungi for sustainable agriculture-a review · 2018. 5. 15. · mycorrhiza are the rule...
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AGRICULTURAL RESEARCH COMMUNICATION CENTREAgric Rev 31 (2) 93 - 1042010 wwwarccjournalscom indianjournals com
MYCORRHIZAL FUNGI FOR SUSTAINABLE AGRICULTURE-A REVIEW
Shiv Ram Singh Ummed Singh AK Chaubey and M1 Bhat
Regional Research Station Sher-e- Kashmir University of Agricultural Sciences and
Technology of Kashmir Wadura Sopore (JampK)-193 201 India
ABSTRACT
Mycorrhizal fungi are species of Glomalean fungi that intimately associated with plant
roots forming a symbiotic relationship with plant providing sugars for the fungi and the fungi
providing nutrients such as P Zn Cu etc to the plant protection from drought stress conditions
toxic effect of heavy metals and infection of some soil born diseases with increased plant growth
Further this association enhances the formation of stable soil aggregates that improves the
stability of soil structure especially under course grain soil condition and restricts soil erosion
The mycorrhizal fungi also offer a great potential for sustainable agriculture The production of
mycorrhizal fungal inocula is laborious and cost-consuming due to its obligate biotrophic nature
Spores of arbuscular mycorrhizal (AM) fungi in soil can be collected by wet sieving and decanting
method and pure culture of mycorrhizal fungi produced either by Soil Trap Culture or Single
Spore methods Thereafter spores were characterized on the basis of their shape size colours
and hyphal attachment and classified on the basis of their morphology Each genus of mycorrhizal
fungi has specific cell wall characters that may be used for identification
Key Words Mycorrhizal fungi Sustainable agriculture
One of the ecological and economically
important activities of soil fungi is the mutually
beneficial association (symbiosis) between certain
fungi and the roots of higher plants This association
is called mycorrhizae a term meaning fungi root
A mycorrhizae is formed when the appropriate
fungus invades a plant root in a process superficially
similar to infection by pathogenic fungi (Hodge
2000) However in the mycorrhizal association the
fungus and the plant have appropriately co-evolved
so that both are benefited from the relationship In
fact in natural ecosystem many plants are quite
dependent on mycorrhizal relationship and cannot
survive without them Mycorrhiza are the rule not
the exception for most plant species including the
majority of economically important plants (more
than 80 of land plant families) included in these
Emailshivramsingh22 gmail com
are many species though crops in the Brasicaceae
Chenopodiaceae Cyperaceaa Juncaceae
Urticaceae and Caryophyllaceae families generally
do not form mycorrhizal associations (Newman and
Reddell 1987) Mycorrhizal structures have been
found in fossils of plants that lived some 400 million
years ago indicating that mycorrhizal infection may
have played a role in the evolutionary adaptation of
plants to the land environment Mycorhizal fungi
derive an enormous surv ival advantage from
teaming up with plants Instead of having to compete
with all the other soil heterotrophs for decaying
organic matter the mycorrhizal fungi obtain sugars
directly from the plants root cells This represents
an energy cost to the plant which may lose as much
as 5-30 of its total photosynthates production to
its mycorrhizal fungi symbionts
94 AGRICUTURAL REVEWS
Importance of mycorrhizae 1 Mycorrhizal fungi greatly enhanced the ability
of plants to take up phosphorus and other
nutrients those are relatively immobile and exist
in low concentration in the soil solution
Arbuscular mycorrhizal fungi can playa significant role in P nutrition of crop increasing total uptake and in turn P use efficiency This might be associated with increased growth and
crop yield (Koide et aI 2004) Where
colonization by arbuscular mycorrhizal fungi is
disrupted either by cultural operation or suppressed due to high concentration of soil available P uptake of p growth and in some
cases yield can be significantly reduced even
some times crops fail to response to colonization
by native mycorrhizal fungi (Sorensen et ai 2005) Though P uptake in mainly translocated
by the arbuscular mycorrhizal association it has
become increasingly apparent that arbuscular
mycorrhizal fungi can be important in the uptake
of other nutrients by the host plant Zinc nutrition
is most commonly reported as being influenced
by the association although uptake of copper
(Cu) iron N K Ca and Mg has been reported
to be enhanced (Clark and Zeto 2000)
Arbuscular mycorrhizal fungi may also enhance
plant uptake of N from organic sources (Hodge
et ai 2001)
2 Water uptake may be improved by mycorrhizal
association making more resistant to drought
condition Several mechanisms have been
proposed to explain the effect including
increased root hydraulic conductivity improved
stomatal regulation osmotic regulation osmotic adjustment of the host and improved contact with soil particles through the binding effect of
hyphae enabling water to be extracted from
smaller pores (Auge 2004) Often both water
and nutrient uptake are higher in drought stressed mycorrhizal plants than in nonshymycorrhizal plants (Al-Karaki and Clark 1990) Increased phosphorus levels generally increase
drought resistance calculations made from
arbuscular mycorrhizal fungi indicate that the
amount of water that could travel through the
mycelia to the plant is not large enough to influence plant growth or survival However work with ectomycorhizae showed that the
fungal strands are capable of altering the water
potential of plants Seedlings were maintained
in a healthy state for at least 10 week period
when the only source of water was through
mycelia strands growing in moist peat However
arbusculpr mycorrhizal fungi can only alleviate
moderate drought stress and in more severe
drought conditions they become ineffective (Bryla and Duniway 1997)
3 Though nutrient uptake has been the focus of
much research on the mycorrhizal association
there is evidence that mycorrhizal also play a
role in the suppression of crop pest parasitic
nematodes and diseases particularly soil borne
fungal diseases by producing antibiotics
altering the root epidemics and compacting with
fungal pathogens for infection sites (Borowicz
2001) Some of the soil borne diseases which
have been experimentally suppressed using
Table 1 Selected soil borne fungal diseases controlled by AMF
Pathogen Disease Crop Reference
Aphanomces euteiches Root rot Pea (Pisum sativum) Bodker et al(2002) Fusarium oxsporum Fusarium root rot Asparagus (Asparagus ofjcinalisFrench Matsubara et al (2002)
bean (Phaseolus vulgaris) Helicobasidium mompa Violet root rot Asparagus (Asparagus officinalis Kasiamdari et al (2002) Rhizoctonia solani Root and stem rots Mung bean ( Vigna radiate) Kjoller and Rosendahl (1996) Sclerotium cepivorum White rot Onion (Allium cepa) Torres-Barragan et al (1996) Verticillium dohliae Verticilium wilt Tomato(Lycopersicon esculentum) Karagiannidis et al(2002) Pythium aphanidermatum Damping off Tomato(Lycopersicon esculentum) Jallali and Chand (1987)
95 Va 31 No 2 2010
arbuscular mycorrhizal fungi (AMF) are given
in Table 1 This reduction in the severity of
diseases occurs rather than total inhibition This
can still result in a significant increase in yield
over plants and inoculated with AMF and occurs
despite the fact that pathogen infection generally
reduces AM colonization In some cases the
apparent resistance of a plant to a pest or disease
may be simply the result of improved nutrition
(Karagiannidis et al 2002) Once colonization
of a root cell by AMF occurs the pathogens are
excluded from that cell as a result the most
effective control is achieved when colonization
by mycorrhizal fungi takes place before attack
by pathogen (Sylvia and Chellemi 2001) Other
type of pest and diseases causing organisms
which may be suppressed by arbuscular
mycorrhizal fungi include pathogenic nematodes
((Talavera et ai 2001) above ground fungal
disease and herbivores (Gange et ai 2005) Though the mechanisms involved are complex
change in nutritional status resulting in changes
to leaf defensive chemicals are likely to be
involved in above ground interactions with
herbivores (Gange and West 1994)
4 Mycorrhizal fungi have an important role in
stabilizing soil aggregates which is especially
important in an agricultural context where
cultivation trafficking and low level of soil
organic matter all tend to result in damaged soil
structure The host plant transfers as much as
20 of all fixed C to the fungal partner and in
agricultural soils AMF can produce Significant
biomass Like other soil fungi AMF can produce
significant micro-aggregates into larger macroshy
aggregates through the enmeshing effect of there
hyphae In addition AMF produce an
extracellular glycoprotein (gooey protein)
glomalin which sticks hyphae to soil and is very
effective as a cementing agent (Rilling et al 2001) Whether glomalin is important or not
general hyphae exudation and rapid hyphae
turnover provide carbon to other soil
microorganisms indirectly promoting aggregate
stability The over all effect of hyphae
enmeshment and inputs can be significant
increase in soil structural stability (Piotrowski
eta 2004)
5 The soils contaminated with high levels of metals
or salts mycorrhizal protect the plants from
excessive uptake of there potential toxins It has
been thought that the heavy metals are bound
by carbonyl groups in the pectic compounds
(hemicelluloses) of the interfacial between the
fungus and the host cells It has also been
demonstrated that plants growing in mine spoils
with heavy metals
6 As well as interacting with disease causing soil
organisms AMF also interact with a whole range
of other microorganisms in soils Bacterial
communities and specific bacterial strains
promote germination of AM fungal spores and
can increase the rate and extent of root
colonization by AM fungi (Johansson et a 2004) Once the arbuscular symbiosis has
developed AM hyphae influence the surrounding
soil which has been termed the
mycorrhizosphere resulting in the development
of distinct microbial communities relative to the
rhizosphere and bulk soil Within the
mycorrhizosphere free living N fixing bacteria
and general plant growth promoting
rhizobacteria (PGPR) (Biro et a 2000) The legume-Rhizobium symbiosis is greatly
influenced by AMF and there is some evidence
to suggest that legume nodules contain AMF
communities quite distinct from those found in
the roots of legume (Scheublin eta 2004) The
Rhizobium symbiosis is dependent on high
concentration of P and so the enhanced P
nutrition arising from the AM colonization can
result in an increase in nodulation and N2 fixation (Vazquez et al2002)
7 It can be used together with other agricultural
chemicals to some extent Mycorrhizae are
endurable to several chemical substances eg
96 AGRICUTURAL REVlEWS
I hr n notlets
Figl Ectomycorrhizal association with plant roots Fig2 Endomycorrhizal association with plant roots
Source The Nature and Properties of Soils (lOthEd) by Nyle C Brady Prentice-Hall of India Private limited New Delhi
pesticides such as endrin chlorodane methyl
parathion methyl carbofuran herbicide such
as glyphosate fuazifopbutyl chemical agents for
plant disease elimination such as captan
benomyle maneb triforine mancozed and
zineb However the effect of biocides on the
arbuscular mycorrhizal association is complex
and not easily predictable Even the effect of
fungicides is not straight forward Sreenivasa and Bagyaraj (1989) tested the effect of nine fungicides on Glomus fasciculatum in pot trails
At their recommended application rates all fungicides reduced root colonization of Rhodes grass (Chloris gayana) by 12 to 25 and spore
production by 19 to 25 but at half the recommended rate Captan (Nshy
(trichloromethylthio) cyco-hex-4-ene-l2shydicarboximide) increased all measured
mycorrhizal parameters Udaiyan et a (1990) looked at the effect of six fungicides on
arbuscrlar mycorrhizal fungal colonization and
sporolation in three types of millet (Eleusine coracana Pankum miljaceum and Paspalum scrobiculatum) under field conditions At their
recommended application rates some reduced
root colonization and sporolation while others
had no effect or increased arbuscular
mycorrhizal colonization and sporolation
depending on the species of millet involved
However when applied for control of leaf fungal
diseases at their recommended rates they had
no effect on mycorrhizal colonization Indeed
paradoxically some fungicides are regularly
shown to have no deleterious effect on arbuscular
mycorrhizal fungi and in some cases increase
mycorrhizal colonization and nutrient uptake
especially at reduced application rate (Hwang
et a 1993)
Kinds of mycorrhizae- Two types mycorrhizal
associations are of considerable practical
importance
1 Ectomycorrhiza- Ectomycorhizae covers
roots and rootlets with a thick mantel of hyphae
The fungal sheath spreads between the cortical
cells of roots Their hyphae penetrate the roots
and develop in the free space around the cells of the cortex to form a complex intercellular system
called the harting net (Harley and Smith 1983)
but do not penetrate the cortex cell wall (hence
the term ecto meaning outside) Ectomycorhizae
cause the infected root system to consist primarily
of stubby white rootlets with a characteristics Y
shape (Fig 1)These might be due to the
production of auxins that are responsible for some
of the morphological differences between
97 Vol 31 No 2 2010
mycorrhizal and non-mycorrhizal roots
Ectomycorrhizae consists of septet fungal cells
belonging to the Basidiomycetes are dependent
on carbohydrates which are supplied by the root It has been shown that C14labelled photosynthates
are rapidly translocated not only to the roots but
also into the sheath and hyphae of mycorrhizal fungi Carbohydrates mainly in the form of
sucrose obtained from the host root are rapidly
converted into typical fungal sugars such
astrehalose or mannitol In this way the organic
carbon is trapped because these sugars are only
poorly reassimilated by the piant root It has been shown that the transport of assimilates from the
aerial plant parts towards the roots is higher in
mycorrhizal infected plants than in non infected
plants The mycorrhiza is thus a sink for
photosynthates
The ectomycorrhizae group includes
hundreds of different fungal species associated
primarily with temperate or semiarid region trees
and shrubs such as pine birch hemlock beech
oak spruce and fir Further research has shown
that some of the trees and in even some tree
legumes viz Alnus Cupressus Juniperus Acacia and Casuarina has been found to associate with
both ecto and ectendomycorrhizas which have
some characteristics of both ecto and
endomycorrhiza The external mantle may be
much reduced or even absent in some mycorrhiza
on trees The Harting net is well developed but
hypha also penetrates into cells of the host The
same fungus that produces ectomycorrhiza may
on a different host plant or under different
conditions from ectendomycorrhiza Inoculation with Pisolithus tintorius and Telephora terrestrius which is most important species of ectomycorrhiza is greatly enhanced the growth of temperate forest
trees
2 Endomycorrhiza The most important members of
endomycorrhiza group are called arbuscular
mycorrhizae (AM) Formerly these were called
vesicular arbuscular mycorrhizae (VAM) but this
was shortened to AM since fungal hyphae actually
penetrate the cortical root cell wall and once inside
the plant cell form small hyphae branched structures
known as arbuscules Fungi of the endomycorrhizae
consist of aseptet hyphae are members of the
Phycomycetes and Basidiomycetes The hyphae of
these fUhgi penetrate the cells of the root cortex
forming an internal hyphae network Some hyphae
also extend into the soil For many plant species
including most agricultural crops the predominant
type of fungal infection is vesicular arbuscular
mycorrhizae (VAM) This name derives from the
occurrence of two types of structures characteristics
of the fungi belongs to the family Endogonaceae
(Fig 2) The fungus may be considered as a twoshy
phase system with a mycelium in the cortex
Table 2 Endomycorrhizal associated and non associated crops
Mycorrhizal associated crops Group Crops
Cereals Corn sorghum wheat oat barley dryland rice Legumes Soybean alfalfa lentil peas clovers greengram black gram cow pea beans pigeon pea chick pea
ground nut Lucerne Vegetables Potato tomato brinjal chilli cucumber onion garlic bitter gourd ladies finger round gourd carrot Fruits Apple plum pear cherry peach grapes citrus mulberry strawberry papaya Forest trees Maple yellow poplar red wood Plantation crops Cocoa coffee rubber Others Cotton sugarcane cassava
Mycorrhizal not associated crops Group Crops Cruciferae Cabbage mustarded canola broccoli radish turnip Chenopodiaceae Sugar beet red beet spinach
98 AGRICUTURAL REVIEWS
Classification of mycorrhizae shyClassification of mycorrhizal fungi according to Morton and Benny (1990) is given as follows
1 Order
2 Sub order
3 Family
4 Genus
connected to an external mycelium in the
rhizosphere and soil It also shows the presence of
structures at different stages in development with a
shrub like appearance called arbuscles (arbuscula
Latin=shrub) These structures are similar to
haustoria but are produced by dichotomous
branching of hyphae These structures serve to
transfer mineral nutrients from the fungi to host plants
and sugars from the plant to the fungus The second
type of structure the Vesicle (Vesicula Latin=small
bladder) may be formed by swelling of the hyphae
and may occur within or between cells and serve as
storage organs for mycorrhizae The AM fungi are
the most common and widespread group Nearby
100 identified species of fungi from these
endomycorrhizal associations in soils from the tropics to the arctic (Table 2)
The members of Glominae suborder forming
intraradical vesicles and branched haustoria called
Entrophosphora
arbuscles in mycorrhizal roots spores born
terminally intercalarily and laterally form one or
more subtending hyphal is known as vesicular
arbuscular mycorrhizae (VAM) while as members
of Gigasporinae sub order do not form vesicles and
hence are arbuscular mycorrhizal fungi (AM)
Mechanisms of nutrients and water uptake-The association between the host and fungus
is well co-ordinated Young feeding do not roots
show any sign of damage when infected Indeed
the living root is essential for the culture of these
fungi The host plant supplying the fungus with
organic compounds and the fungus assisting the
roots in exploiting the soil for water and inorganic
nutrients The relationship is of particular
importance for phosphorus nutrition since
phosphate depletion zones can readily occur around
plant roots The network of hyphae extending from
the roots into the soil enlarges the contact area
- --- -~
VeSicle extraradicat
spore hyphae
- (- ) --2- - Jmij] ----- g-WCmiddotm-middot-middot-shy - null_~_ ~ v~=--------
soil root
Fig3 Schematic picture of AM fungi colonizing root and their hyphaI extension into soil
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACAl March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
between the bulk soil and the fungus-host root
association around depletion zone of soil thus create
a potential gradient against high concentration zone
from bulk of soil to the less concentrated depleted
zone by diffusion and hence facilitates a greater
uptake of phosphate It also indicates the possibility
that rate of phosphate uptake by the hyphae may
be higher than that by the root Phosphate translocation in the hyphae appears to be rapid
The phosphate is translocated in the form of small polyphosphate granules in the hyphae thus
maintaining low internal phosphate (Pi)
concentration by cytoplasmic streaming (Sorensen
et aJ 2005) Phosphate taken up by the fungus is
from the labile pool of soil phosphate and hence
from a readily available phosphate fraction
Mycorrhizal fungi may take up phosphate from less soluble phosphate which may be of particular
importance in acid tropical soils It has become
increasingly apparent that arbuscular mycorrhizae
fungi can be important in the uptake of other
nutrients by the host plant Zn Cu Fe N K Ca and Mg nutrition is most commonly reported as being
influenced by the mycorrhizal associations (Clark
and Zeto 2000)
Observation of arbuscular mycorrhizal fungi in roots
The structure of arbuscular mycorrhizal
fungus in roots is usually not observed without
appropriate staining Freshly collected root samples
should be washed gently and be free from soil
particles Roots are treated with 10 KOH solution for 30 minute to 1-2 hour in a hot bath depending on thickness of root structure Treated roots are
washed with water and treated with 2 HCI
solution Acidified root samples are stained with
0 05 trypan blue (or acid fuchsin) in lactic acid
for 10-15 minutes in a hot bath or for a few hours without heating (Phillip and Hayman 1970) The
roots are destained with lactic acid or lacto-glycerol
and are now ready for microscopic with transmitted
observation The stained roots may be observed first
under a dissecting microscope with transmitted
illumination and then observed under a compound microscope Fungal structures are stained and can
be easily recognized
100 AGRICUTURALREVIEWS
Table 3 Morphological character of AM or VAM fungal spores
Morphology Characteristics
Shape ( ie globular spher cal Irregular) Size Globular diameter (minimum-average-maximum) Irregular shape length x width (minimumshy
average-maximum) Hyphal attachment (ie sporiferous saccule bulbous suspensor etc) sporiferous saccule= Acaulospora
Entrophosphora bulbous suspensor = Gigaspora Scutellospora Auxiliary cell (presence = Gigaspora Scutellospora none ) Sporocarp (presence none) Germination shield (presence = Scutellospora absent) Surface ornamentation (ie smooth rough reticulate etc) Vesicle (Presence or absence in mycorrhizal roQts)
These characters should be recorded with careful observation of many spores
Glomus [Jiversispora Paraglomus
Acaulospora
Enlrophospora
-~~~
Gigaspora ( )gtgt
- ~ ~lbOUS suspensor
Sculeflospora
~gerrnination shield
fig 4 Morphology of representative genera of arbuscular mycorrhizal fungi
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
Isolation of spores from soils and their observation for identification
Spores of AM fu ngi in soil can be collected by the wet sieving and decanting method The gravity of spores is little than that of soil particles Successive decantation of soil suspension followed by sieving and with fine mesh can concentrate the spores from soil Since the spores are globular or sub-globular in 50-500 pm in diameter they in sievings can be recognized under a dissecting microscope
Equipments 1 Sieve Sieves with various mesh sizes At least
the following mesh sizes are required 1 mm 100
pm and 50 pm other size such as 500 pm and
250pm are preferable Stainless steel sieves are
commercially available However it is possible to make a plastic sieve with PVP tubes and
nylone mesh by yourself
2 Fine glass pipettes Tip of disposal glass Pasteur
pipette (1 ml) is softened with flame of a gas
burner and is sharpened Various sizes of tips
fitting to sizes of spores can be prepared
3 Forceps light fine tweezers is preferable
4 Dissecting microscope Stereoscopic zoom
microscope with bifurcated illuminator of fiber
arm is advisable Transmitted il lumination system is also needed
5 Compound microscope Biological compound
microscope is needed
Procedure 50 g of freshly collected soil sample is put
into 1 to 2 litres of plastic beakers Usually
rhizosphere soils are rich in arbuscular mycorrhizal
fungal spores Beaker size can be changed
depending on the soil sample size Soil is suspended
with about 500 ml to 1 litre of tap water Soil macroshy
aggregates should be crushed with hand after 10shy
30 seconds of setting down of soil particles the upper
layer of soil suspension is poured into the sieving
The procedure should be repeated until the upper
layer of soil suspension is transparent (Gerdemann
and Nicolson 1963) The sieving on the fine mesh
is collected into a small beaker and dispersed with
ultra sonication Weak sonication (ie 30 W 30 sec)
101 Vol 31 No 2 2010
is enough and strong sonication may destroy fungal spores Then the dispersed sample is again passed though the sieve Depending on the toughness of soil aggregate the sonication process can be
repeated UsuaUy AM fungal spores are collected
on 100um some small spores are on 50um To collect large spores such as Gigaspora margarita 250um sieve is efficient
Morphological observation of spores for identification
Morphology of spores is a basis for identification of arbuscular mycorrhizal fungi because the hyphae and the organs such as arbuscules and vesicles are not specific to species Spores collected from the soil often deteriorate so that they may be used only for tentative identification at genus level For detailed observation culturing the target AM fungus is required and the spores from pot culture should be used At least 30-50 spores from the same morphological spores type should be observed and more observation is required
1 Observation of intact spores under dissecting
microscope Spore collected from soil or
Rhizosphere Plant soil
1 (w ith roo ts)
Pl ant trap culture Sieving
Soil trap culture ~ I
-- r
1 i-~II (- soi l
~ I Sores
Fig 5 Methods tor trapping AM tungi
culturing medium is put in a watch glass or a
small Petri dish and their shape colour and the attachment to spores are observed Spores should be classified into each spore type based
upon morphology For each spore type detailed
observation is required
For colour description standard colour chart
such as soil colour chart or colour chart of
glomalean fungi (INVAM colour chart) should be
used The colour chart should be under the same
illumination as used for spore observation because
the colour itself is greatly affected by the
characteristics of illumination It should reminded
that attachment such as soporiferous saccule for
Acaulosporaceae and subtenting hyphae for
Gigasporaceae are often lost during collection of
spores from soil
2 Observation of spores mounted on slide glass
under a compound microscope Spores are
mounted with polyvinyle lactoglycerol (PVLG)
on a slide glass Several slides should be made
Intact and crushed spores mounted with PVLG
Polyvinyle alcohol (polymerization 1000-1500)
Fig 6 Single spore isolation
Source Biofertilizers Manual by FNCA Forum fo r Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
102 AGRICtITURAL REVIEWS
166 g is dissolved in 10 ml deionized water
Complete dissolution may need 6 hours at 80 dc The dissolved polyvinyle alcohol is mixed
with 10 ml of lactic acid and 1 ml of glycerol it
can be used more than a day after preparation
The Important morphological characters of AM
fungi is indicated in Tabie 3 and Fig 4
Culturing of AM fungi AM fungi need the symbiotic association
with plants for proliferation Therefore culturing AM
fungi is to indicate AM fungi to host plant and to
grow the inoculated plant For the AM fungal
inoculum spores collected from soil can be used
However spores in soil are not always active in
colonizing plants Therefore trapping culture is often
employed Soil of sieving of soil is used as medium
(Soil Trap Culture) To isolate AM fungi colonizing
roots mycorrhizal plants collected from field can be
transplanted to potting medium as Plant Trap Culture
(Fig 5) (Murakoshi et ai 1998)
1 Host plant Various mycotrophic plants can be
used viz leguminous species (Trifolium spp Medicago spp Lotus japonicus) (ie Lolium spp Paspalum notatum) and other herbaceous
species (ie Plantago spp) Onion and leek
(Alliumspp ) and maize sorghum are also good
hosts
2 Growth condition Any conditions which support good growth of host plant plants are acceptable To avoid contamination a growth chamber is preferred If green house is used it should be kept clean It should be kept clean It should be remanded that cross-contamination or contamination from dust is inevitable under open-air conditions even in growth chamber To prevent cross-contamination from other pot culture in the same chamber use of plastic bag is advisable (Walker and Vestberg 1994)
3 Procedure A Plant Trap Culture
i Rhizosphere soil is collected with shoots of
trap plant cut at the crown and roots are
finely chopped and mixed with the soils using
a sharp chopper
ii The chopped roots and soil are mixed l1 (vv )
with autoclav ed coarse sand in a
mechanical mixer or massaged well in a jurable plastic bag
iii The soil mix is then transferred to a 15 cm plastic
pot
Iv Plants seeds of suitable trap plants such tropical signal grass into the pot
as
v The pot cultures are maintained in a green house
for at least 3 months and check sporulation
from time to time By the fourth month AMF
sporulation may be at the peak Sanitary tests may also be carried out to ensure no
contamination from parasitic fungi occurs
vi Keep fertilizer application to a minimum to
encourage AMF proliferation
vii Trap culture pots are later left to dry under shade
for up to two weeks
viiiHarvest the spores using the sieving and
decanting techniques or the denSity-gradient
centrifugation technique
ix The mono specification spores are ready for
inoculation onto seedlings of the desired crops
B Single spore isolation To purify an isolated
fungus single spore isolation is needed
Even if the spores are morphologically
identical it often contains contaminants
whose morphology is very similar For single
spore isolation no specific equipment is
needed For effic ient handling two sets of
dissecting microscope are placed side by
side One microscope is for picking up
single spore from spores in a dish Another
is for inoculation of a spore on roots S
seedling placed in the pot is placed under
another microscope Under the fist
microscope single spore is picked up and
transferred under the second microscope
Under the second microscope the spore is
placed on fine roots or root tip of the
seedlings (Fig 6) If culture is successful
103 VoL 31 0 2 2(10
the detailed morphological observation is or the leaf litter under the tree is removed About required Potting medium can be dried by 10 g per plant of VA mycorrhizal biofertilizers is stopping watering to the pot After the host applied to the root hairs system and then plant wilt the dried soil containing spores covered with soil can be stored for a year at 4-5 0 C
3 For transplanting seedling simply sprinkle VA
Inoculation of Arbuscular Mycorrhizae mycorrhizal biofeliilizers adjacent to the plant roots and cover with soil l Seed inoculation- Most of cereals legume
sorghum cotton and vegetables are inoculated 4 VA mycorrhizal biofertilizers can be used in
with seed VAM culture containing infected root combination with several types of biofertilizers (Rhizobium PSB PGPR) bits viable AM-fungal propagules (including
spores) containing 8-10 viable sporesg VAM Problems and potential for VAM inoculum
culture 2 kglha is used production and utilization
2 Soil application- The AM or VAM culture should l Situation where effective indigenous VAM be applied to the open furrows 15 kglha using population is low
field soil to bulk the carrier This method is 2 Inoculation is best for transplanted crops where suitable for fruit crops and plantation crops For soil disturbances have reduced VAM
huit trees soil under the plant canopy is trenched inoculation potential
REFERENCES Al-Karaki GN and Clark RB (1990) Plant Nutr 22 1775-1784
Auge RM (2004) Canadian J Soil Sci 84 373-381
Bryla D Rand Duniway J M (1997) Plant Sai1197 85-108
Biro B etal (2000) Applied Sail Ecol 15 159-168
Borowicz VA (2001) Ecology82 3057-3068
Clark R B and Zeto S K (2000) J Plant Nutr 23 867-902
Gange A C eta (2005) Ecolagy86 603-611
Gange A C and West H M (1994) New Phytal 128 79-87
Gerdemann Jw and Nicolson T H (1963) Trans British MvcolagicaISac 46 235-244
Harley J L and Smith S E (1983) Mycorrhizal Symbiosis Academic Press London
Hwang S E etal (1993) Plant Dis 77 1093-1098
Hodge A (2000) FEMS Microbial Eco 32 91-96
Hodge A eta (2001) Nature 413 297-299
Jallali BL and Chand H (1987) in Proceedings of iSI Asian conference on Mycorrhizae at Madras (Mahadevan et
al Eds)p 209-214
Johansson J eta (2004) FEMS Microbial Eca 48 1-13
Karagiannidis N eta (2002) Sci Hart 94 145-156
Kasiamdari R S et al (2002) Plant and Soil 238 235-244
KjolIer R and Rosendahl S (1996) Mycorrhizae6 487-491
Koide R T eta (2000) NewPhytologyl48 163-168
Matsubara Y et al (2002) J Japan Soc Hod Sci 71 370-374
Morton J B and Benny G L (1990) Mycatoxan 37 471-491
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240
94 AGRICUTURAL REVEWS
Importance of mycorrhizae 1 Mycorrhizal fungi greatly enhanced the ability
of plants to take up phosphorus and other
nutrients those are relatively immobile and exist
in low concentration in the soil solution
Arbuscular mycorrhizal fungi can playa significant role in P nutrition of crop increasing total uptake and in turn P use efficiency This might be associated with increased growth and
crop yield (Koide et aI 2004) Where
colonization by arbuscular mycorrhizal fungi is
disrupted either by cultural operation or suppressed due to high concentration of soil available P uptake of p growth and in some
cases yield can be significantly reduced even
some times crops fail to response to colonization
by native mycorrhizal fungi (Sorensen et ai 2005) Though P uptake in mainly translocated
by the arbuscular mycorrhizal association it has
become increasingly apparent that arbuscular
mycorrhizal fungi can be important in the uptake
of other nutrients by the host plant Zinc nutrition
is most commonly reported as being influenced
by the association although uptake of copper
(Cu) iron N K Ca and Mg has been reported
to be enhanced (Clark and Zeto 2000)
Arbuscular mycorrhizal fungi may also enhance
plant uptake of N from organic sources (Hodge
et ai 2001)
2 Water uptake may be improved by mycorrhizal
association making more resistant to drought
condition Several mechanisms have been
proposed to explain the effect including
increased root hydraulic conductivity improved
stomatal regulation osmotic regulation osmotic adjustment of the host and improved contact with soil particles through the binding effect of
hyphae enabling water to be extracted from
smaller pores (Auge 2004) Often both water
and nutrient uptake are higher in drought stressed mycorrhizal plants than in nonshymycorrhizal plants (Al-Karaki and Clark 1990) Increased phosphorus levels generally increase
drought resistance calculations made from
arbuscular mycorrhizal fungi indicate that the
amount of water that could travel through the
mycelia to the plant is not large enough to influence plant growth or survival However work with ectomycorhizae showed that the
fungal strands are capable of altering the water
potential of plants Seedlings were maintained
in a healthy state for at least 10 week period
when the only source of water was through
mycelia strands growing in moist peat However
arbusculpr mycorrhizal fungi can only alleviate
moderate drought stress and in more severe
drought conditions they become ineffective (Bryla and Duniway 1997)
3 Though nutrient uptake has been the focus of
much research on the mycorrhizal association
there is evidence that mycorrhizal also play a
role in the suppression of crop pest parasitic
nematodes and diseases particularly soil borne
fungal diseases by producing antibiotics
altering the root epidemics and compacting with
fungal pathogens for infection sites (Borowicz
2001) Some of the soil borne diseases which
have been experimentally suppressed using
Table 1 Selected soil borne fungal diseases controlled by AMF
Pathogen Disease Crop Reference
Aphanomces euteiches Root rot Pea (Pisum sativum) Bodker et al(2002) Fusarium oxsporum Fusarium root rot Asparagus (Asparagus ofjcinalisFrench Matsubara et al (2002)
bean (Phaseolus vulgaris) Helicobasidium mompa Violet root rot Asparagus (Asparagus officinalis Kasiamdari et al (2002) Rhizoctonia solani Root and stem rots Mung bean ( Vigna radiate) Kjoller and Rosendahl (1996) Sclerotium cepivorum White rot Onion (Allium cepa) Torres-Barragan et al (1996) Verticillium dohliae Verticilium wilt Tomato(Lycopersicon esculentum) Karagiannidis et al(2002) Pythium aphanidermatum Damping off Tomato(Lycopersicon esculentum) Jallali and Chand (1987)
95 Va 31 No 2 2010
arbuscular mycorrhizal fungi (AMF) are given
in Table 1 This reduction in the severity of
diseases occurs rather than total inhibition This
can still result in a significant increase in yield
over plants and inoculated with AMF and occurs
despite the fact that pathogen infection generally
reduces AM colonization In some cases the
apparent resistance of a plant to a pest or disease
may be simply the result of improved nutrition
(Karagiannidis et al 2002) Once colonization
of a root cell by AMF occurs the pathogens are
excluded from that cell as a result the most
effective control is achieved when colonization
by mycorrhizal fungi takes place before attack
by pathogen (Sylvia and Chellemi 2001) Other
type of pest and diseases causing organisms
which may be suppressed by arbuscular
mycorrhizal fungi include pathogenic nematodes
((Talavera et ai 2001) above ground fungal
disease and herbivores (Gange et ai 2005) Though the mechanisms involved are complex
change in nutritional status resulting in changes
to leaf defensive chemicals are likely to be
involved in above ground interactions with
herbivores (Gange and West 1994)
4 Mycorrhizal fungi have an important role in
stabilizing soil aggregates which is especially
important in an agricultural context where
cultivation trafficking and low level of soil
organic matter all tend to result in damaged soil
structure The host plant transfers as much as
20 of all fixed C to the fungal partner and in
agricultural soils AMF can produce Significant
biomass Like other soil fungi AMF can produce
significant micro-aggregates into larger macroshy
aggregates through the enmeshing effect of there
hyphae In addition AMF produce an
extracellular glycoprotein (gooey protein)
glomalin which sticks hyphae to soil and is very
effective as a cementing agent (Rilling et al 2001) Whether glomalin is important or not
general hyphae exudation and rapid hyphae
turnover provide carbon to other soil
microorganisms indirectly promoting aggregate
stability The over all effect of hyphae
enmeshment and inputs can be significant
increase in soil structural stability (Piotrowski
eta 2004)
5 The soils contaminated with high levels of metals
or salts mycorrhizal protect the plants from
excessive uptake of there potential toxins It has
been thought that the heavy metals are bound
by carbonyl groups in the pectic compounds
(hemicelluloses) of the interfacial between the
fungus and the host cells It has also been
demonstrated that plants growing in mine spoils
with heavy metals
6 As well as interacting with disease causing soil
organisms AMF also interact with a whole range
of other microorganisms in soils Bacterial
communities and specific bacterial strains
promote germination of AM fungal spores and
can increase the rate and extent of root
colonization by AM fungi (Johansson et a 2004) Once the arbuscular symbiosis has
developed AM hyphae influence the surrounding
soil which has been termed the
mycorrhizosphere resulting in the development
of distinct microbial communities relative to the
rhizosphere and bulk soil Within the
mycorrhizosphere free living N fixing bacteria
and general plant growth promoting
rhizobacteria (PGPR) (Biro et a 2000) The legume-Rhizobium symbiosis is greatly
influenced by AMF and there is some evidence
to suggest that legume nodules contain AMF
communities quite distinct from those found in
the roots of legume (Scheublin eta 2004) The
Rhizobium symbiosis is dependent on high
concentration of P and so the enhanced P
nutrition arising from the AM colonization can
result in an increase in nodulation and N2 fixation (Vazquez et al2002)
7 It can be used together with other agricultural
chemicals to some extent Mycorrhizae are
endurable to several chemical substances eg
96 AGRICUTURAL REVlEWS
I hr n notlets
Figl Ectomycorrhizal association with plant roots Fig2 Endomycorrhizal association with plant roots
Source The Nature and Properties of Soils (lOthEd) by Nyle C Brady Prentice-Hall of India Private limited New Delhi
pesticides such as endrin chlorodane methyl
parathion methyl carbofuran herbicide such
as glyphosate fuazifopbutyl chemical agents for
plant disease elimination such as captan
benomyle maneb triforine mancozed and
zineb However the effect of biocides on the
arbuscular mycorrhizal association is complex
and not easily predictable Even the effect of
fungicides is not straight forward Sreenivasa and Bagyaraj (1989) tested the effect of nine fungicides on Glomus fasciculatum in pot trails
At their recommended application rates all fungicides reduced root colonization of Rhodes grass (Chloris gayana) by 12 to 25 and spore
production by 19 to 25 but at half the recommended rate Captan (Nshy
(trichloromethylthio) cyco-hex-4-ene-l2shydicarboximide) increased all measured
mycorrhizal parameters Udaiyan et a (1990) looked at the effect of six fungicides on
arbuscrlar mycorrhizal fungal colonization and
sporolation in three types of millet (Eleusine coracana Pankum miljaceum and Paspalum scrobiculatum) under field conditions At their
recommended application rates some reduced
root colonization and sporolation while others
had no effect or increased arbuscular
mycorrhizal colonization and sporolation
depending on the species of millet involved
However when applied for control of leaf fungal
diseases at their recommended rates they had
no effect on mycorrhizal colonization Indeed
paradoxically some fungicides are regularly
shown to have no deleterious effect on arbuscular
mycorrhizal fungi and in some cases increase
mycorrhizal colonization and nutrient uptake
especially at reduced application rate (Hwang
et a 1993)
Kinds of mycorrhizae- Two types mycorrhizal
associations are of considerable practical
importance
1 Ectomycorrhiza- Ectomycorhizae covers
roots and rootlets with a thick mantel of hyphae
The fungal sheath spreads between the cortical
cells of roots Their hyphae penetrate the roots
and develop in the free space around the cells of the cortex to form a complex intercellular system
called the harting net (Harley and Smith 1983)
but do not penetrate the cortex cell wall (hence
the term ecto meaning outside) Ectomycorhizae
cause the infected root system to consist primarily
of stubby white rootlets with a characteristics Y
shape (Fig 1)These might be due to the
production of auxins that are responsible for some
of the morphological differences between
97 Vol 31 No 2 2010
mycorrhizal and non-mycorrhizal roots
Ectomycorrhizae consists of septet fungal cells
belonging to the Basidiomycetes are dependent
on carbohydrates which are supplied by the root It has been shown that C14labelled photosynthates
are rapidly translocated not only to the roots but
also into the sheath and hyphae of mycorrhizal fungi Carbohydrates mainly in the form of
sucrose obtained from the host root are rapidly
converted into typical fungal sugars such
astrehalose or mannitol In this way the organic
carbon is trapped because these sugars are only
poorly reassimilated by the piant root It has been shown that the transport of assimilates from the
aerial plant parts towards the roots is higher in
mycorrhizal infected plants than in non infected
plants The mycorrhiza is thus a sink for
photosynthates
The ectomycorrhizae group includes
hundreds of different fungal species associated
primarily with temperate or semiarid region trees
and shrubs such as pine birch hemlock beech
oak spruce and fir Further research has shown
that some of the trees and in even some tree
legumes viz Alnus Cupressus Juniperus Acacia and Casuarina has been found to associate with
both ecto and ectendomycorrhizas which have
some characteristics of both ecto and
endomycorrhiza The external mantle may be
much reduced or even absent in some mycorrhiza
on trees The Harting net is well developed but
hypha also penetrates into cells of the host The
same fungus that produces ectomycorrhiza may
on a different host plant or under different
conditions from ectendomycorrhiza Inoculation with Pisolithus tintorius and Telephora terrestrius which is most important species of ectomycorrhiza is greatly enhanced the growth of temperate forest
trees
2 Endomycorrhiza The most important members of
endomycorrhiza group are called arbuscular
mycorrhizae (AM) Formerly these were called
vesicular arbuscular mycorrhizae (VAM) but this
was shortened to AM since fungal hyphae actually
penetrate the cortical root cell wall and once inside
the plant cell form small hyphae branched structures
known as arbuscules Fungi of the endomycorrhizae
consist of aseptet hyphae are members of the
Phycomycetes and Basidiomycetes The hyphae of
these fUhgi penetrate the cells of the root cortex
forming an internal hyphae network Some hyphae
also extend into the soil For many plant species
including most agricultural crops the predominant
type of fungal infection is vesicular arbuscular
mycorrhizae (VAM) This name derives from the
occurrence of two types of structures characteristics
of the fungi belongs to the family Endogonaceae
(Fig 2) The fungus may be considered as a twoshy
phase system with a mycelium in the cortex
Table 2 Endomycorrhizal associated and non associated crops
Mycorrhizal associated crops Group Crops
Cereals Corn sorghum wheat oat barley dryland rice Legumes Soybean alfalfa lentil peas clovers greengram black gram cow pea beans pigeon pea chick pea
ground nut Lucerne Vegetables Potato tomato brinjal chilli cucumber onion garlic bitter gourd ladies finger round gourd carrot Fruits Apple plum pear cherry peach grapes citrus mulberry strawberry papaya Forest trees Maple yellow poplar red wood Plantation crops Cocoa coffee rubber Others Cotton sugarcane cassava
Mycorrhizal not associated crops Group Crops Cruciferae Cabbage mustarded canola broccoli radish turnip Chenopodiaceae Sugar beet red beet spinach
98 AGRICUTURAL REVIEWS
Classification of mycorrhizae shyClassification of mycorrhizal fungi according to Morton and Benny (1990) is given as follows
1 Order
2 Sub order
3 Family
4 Genus
connected to an external mycelium in the
rhizosphere and soil It also shows the presence of
structures at different stages in development with a
shrub like appearance called arbuscles (arbuscula
Latin=shrub) These structures are similar to
haustoria but are produced by dichotomous
branching of hyphae These structures serve to
transfer mineral nutrients from the fungi to host plants
and sugars from the plant to the fungus The second
type of structure the Vesicle (Vesicula Latin=small
bladder) may be formed by swelling of the hyphae
and may occur within or between cells and serve as
storage organs for mycorrhizae The AM fungi are
the most common and widespread group Nearby
100 identified species of fungi from these
endomycorrhizal associations in soils from the tropics to the arctic (Table 2)
The members of Glominae suborder forming
intraradical vesicles and branched haustoria called
Entrophosphora
arbuscles in mycorrhizal roots spores born
terminally intercalarily and laterally form one or
more subtending hyphal is known as vesicular
arbuscular mycorrhizae (VAM) while as members
of Gigasporinae sub order do not form vesicles and
hence are arbuscular mycorrhizal fungi (AM)
Mechanisms of nutrients and water uptake-The association between the host and fungus
is well co-ordinated Young feeding do not roots
show any sign of damage when infected Indeed
the living root is essential for the culture of these
fungi The host plant supplying the fungus with
organic compounds and the fungus assisting the
roots in exploiting the soil for water and inorganic
nutrients The relationship is of particular
importance for phosphorus nutrition since
phosphate depletion zones can readily occur around
plant roots The network of hyphae extending from
the roots into the soil enlarges the contact area
- --- -~
VeSicle extraradicat
spore hyphae
- (- ) --2- - Jmij] ----- g-WCmiddotm-middot-middot-shy - null_~_ ~ v~=--------
soil root
Fig3 Schematic picture of AM fungi colonizing root and their hyphaI extension into soil
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACAl March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
between the bulk soil and the fungus-host root
association around depletion zone of soil thus create
a potential gradient against high concentration zone
from bulk of soil to the less concentrated depleted
zone by diffusion and hence facilitates a greater
uptake of phosphate It also indicates the possibility
that rate of phosphate uptake by the hyphae may
be higher than that by the root Phosphate translocation in the hyphae appears to be rapid
The phosphate is translocated in the form of small polyphosphate granules in the hyphae thus
maintaining low internal phosphate (Pi)
concentration by cytoplasmic streaming (Sorensen
et aJ 2005) Phosphate taken up by the fungus is
from the labile pool of soil phosphate and hence
from a readily available phosphate fraction
Mycorrhizal fungi may take up phosphate from less soluble phosphate which may be of particular
importance in acid tropical soils It has become
increasingly apparent that arbuscular mycorrhizae
fungi can be important in the uptake of other
nutrients by the host plant Zn Cu Fe N K Ca and Mg nutrition is most commonly reported as being
influenced by the mycorrhizal associations (Clark
and Zeto 2000)
Observation of arbuscular mycorrhizal fungi in roots
The structure of arbuscular mycorrhizal
fungus in roots is usually not observed without
appropriate staining Freshly collected root samples
should be washed gently and be free from soil
particles Roots are treated with 10 KOH solution for 30 minute to 1-2 hour in a hot bath depending on thickness of root structure Treated roots are
washed with water and treated with 2 HCI
solution Acidified root samples are stained with
0 05 trypan blue (or acid fuchsin) in lactic acid
for 10-15 minutes in a hot bath or for a few hours without heating (Phillip and Hayman 1970) The
roots are destained with lactic acid or lacto-glycerol
and are now ready for microscopic with transmitted
observation The stained roots may be observed first
under a dissecting microscope with transmitted
illumination and then observed under a compound microscope Fungal structures are stained and can
be easily recognized
100 AGRICUTURALREVIEWS
Table 3 Morphological character of AM or VAM fungal spores
Morphology Characteristics
Shape ( ie globular spher cal Irregular) Size Globular diameter (minimum-average-maximum) Irregular shape length x width (minimumshy
average-maximum) Hyphal attachment (ie sporiferous saccule bulbous suspensor etc) sporiferous saccule= Acaulospora
Entrophosphora bulbous suspensor = Gigaspora Scutellospora Auxiliary cell (presence = Gigaspora Scutellospora none ) Sporocarp (presence none) Germination shield (presence = Scutellospora absent) Surface ornamentation (ie smooth rough reticulate etc) Vesicle (Presence or absence in mycorrhizal roQts)
These characters should be recorded with careful observation of many spores
Glomus [Jiversispora Paraglomus
Acaulospora
Enlrophospora
-~~~
Gigaspora ( )gtgt
- ~ ~lbOUS suspensor
Sculeflospora
~gerrnination shield
fig 4 Morphology of representative genera of arbuscular mycorrhizal fungi
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
Isolation of spores from soils and their observation for identification
Spores of AM fu ngi in soil can be collected by the wet sieving and decanting method The gravity of spores is little than that of soil particles Successive decantation of soil suspension followed by sieving and with fine mesh can concentrate the spores from soil Since the spores are globular or sub-globular in 50-500 pm in diameter they in sievings can be recognized under a dissecting microscope
Equipments 1 Sieve Sieves with various mesh sizes At least
the following mesh sizes are required 1 mm 100
pm and 50 pm other size such as 500 pm and
250pm are preferable Stainless steel sieves are
commercially available However it is possible to make a plastic sieve with PVP tubes and
nylone mesh by yourself
2 Fine glass pipettes Tip of disposal glass Pasteur
pipette (1 ml) is softened with flame of a gas
burner and is sharpened Various sizes of tips
fitting to sizes of spores can be prepared
3 Forceps light fine tweezers is preferable
4 Dissecting microscope Stereoscopic zoom
microscope with bifurcated illuminator of fiber
arm is advisable Transmitted il lumination system is also needed
5 Compound microscope Biological compound
microscope is needed
Procedure 50 g of freshly collected soil sample is put
into 1 to 2 litres of plastic beakers Usually
rhizosphere soils are rich in arbuscular mycorrhizal
fungal spores Beaker size can be changed
depending on the soil sample size Soil is suspended
with about 500 ml to 1 litre of tap water Soil macroshy
aggregates should be crushed with hand after 10shy
30 seconds of setting down of soil particles the upper
layer of soil suspension is poured into the sieving
The procedure should be repeated until the upper
layer of soil suspension is transparent (Gerdemann
and Nicolson 1963) The sieving on the fine mesh
is collected into a small beaker and dispersed with
ultra sonication Weak sonication (ie 30 W 30 sec)
101 Vol 31 No 2 2010
is enough and strong sonication may destroy fungal spores Then the dispersed sample is again passed though the sieve Depending on the toughness of soil aggregate the sonication process can be
repeated UsuaUy AM fungal spores are collected
on 100um some small spores are on 50um To collect large spores such as Gigaspora margarita 250um sieve is efficient
Morphological observation of spores for identification
Morphology of spores is a basis for identification of arbuscular mycorrhizal fungi because the hyphae and the organs such as arbuscules and vesicles are not specific to species Spores collected from the soil often deteriorate so that they may be used only for tentative identification at genus level For detailed observation culturing the target AM fungus is required and the spores from pot culture should be used At least 30-50 spores from the same morphological spores type should be observed and more observation is required
1 Observation of intact spores under dissecting
microscope Spore collected from soil or
Rhizosphere Plant soil
1 (w ith roo ts)
Pl ant trap culture Sieving
Soil trap culture ~ I
-- r
1 i-~II (- soi l
~ I Sores
Fig 5 Methods tor trapping AM tungi
culturing medium is put in a watch glass or a
small Petri dish and their shape colour and the attachment to spores are observed Spores should be classified into each spore type based
upon morphology For each spore type detailed
observation is required
For colour description standard colour chart
such as soil colour chart or colour chart of
glomalean fungi (INVAM colour chart) should be
used The colour chart should be under the same
illumination as used for spore observation because
the colour itself is greatly affected by the
characteristics of illumination It should reminded
that attachment such as soporiferous saccule for
Acaulosporaceae and subtenting hyphae for
Gigasporaceae are often lost during collection of
spores from soil
2 Observation of spores mounted on slide glass
under a compound microscope Spores are
mounted with polyvinyle lactoglycerol (PVLG)
on a slide glass Several slides should be made
Intact and crushed spores mounted with PVLG
Polyvinyle alcohol (polymerization 1000-1500)
Fig 6 Single spore isolation
Source Biofertilizers Manual by FNCA Forum fo r Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
102 AGRICtITURAL REVIEWS
166 g is dissolved in 10 ml deionized water
Complete dissolution may need 6 hours at 80 dc The dissolved polyvinyle alcohol is mixed
with 10 ml of lactic acid and 1 ml of glycerol it
can be used more than a day after preparation
The Important morphological characters of AM
fungi is indicated in Tabie 3 and Fig 4
Culturing of AM fungi AM fungi need the symbiotic association
with plants for proliferation Therefore culturing AM
fungi is to indicate AM fungi to host plant and to
grow the inoculated plant For the AM fungal
inoculum spores collected from soil can be used
However spores in soil are not always active in
colonizing plants Therefore trapping culture is often
employed Soil of sieving of soil is used as medium
(Soil Trap Culture) To isolate AM fungi colonizing
roots mycorrhizal plants collected from field can be
transplanted to potting medium as Plant Trap Culture
(Fig 5) (Murakoshi et ai 1998)
1 Host plant Various mycotrophic plants can be
used viz leguminous species (Trifolium spp Medicago spp Lotus japonicus) (ie Lolium spp Paspalum notatum) and other herbaceous
species (ie Plantago spp) Onion and leek
(Alliumspp ) and maize sorghum are also good
hosts
2 Growth condition Any conditions which support good growth of host plant plants are acceptable To avoid contamination a growth chamber is preferred If green house is used it should be kept clean It should be kept clean It should be remanded that cross-contamination or contamination from dust is inevitable under open-air conditions even in growth chamber To prevent cross-contamination from other pot culture in the same chamber use of plastic bag is advisable (Walker and Vestberg 1994)
3 Procedure A Plant Trap Culture
i Rhizosphere soil is collected with shoots of
trap plant cut at the crown and roots are
finely chopped and mixed with the soils using
a sharp chopper
ii The chopped roots and soil are mixed l1 (vv )
with autoclav ed coarse sand in a
mechanical mixer or massaged well in a jurable plastic bag
iii The soil mix is then transferred to a 15 cm plastic
pot
Iv Plants seeds of suitable trap plants such tropical signal grass into the pot
as
v The pot cultures are maintained in a green house
for at least 3 months and check sporulation
from time to time By the fourth month AMF
sporulation may be at the peak Sanitary tests may also be carried out to ensure no
contamination from parasitic fungi occurs
vi Keep fertilizer application to a minimum to
encourage AMF proliferation
vii Trap culture pots are later left to dry under shade
for up to two weeks
viiiHarvest the spores using the sieving and
decanting techniques or the denSity-gradient
centrifugation technique
ix The mono specification spores are ready for
inoculation onto seedlings of the desired crops
B Single spore isolation To purify an isolated
fungus single spore isolation is needed
Even if the spores are morphologically
identical it often contains contaminants
whose morphology is very similar For single
spore isolation no specific equipment is
needed For effic ient handling two sets of
dissecting microscope are placed side by
side One microscope is for picking up
single spore from spores in a dish Another
is for inoculation of a spore on roots S
seedling placed in the pot is placed under
another microscope Under the fist
microscope single spore is picked up and
transferred under the second microscope
Under the second microscope the spore is
placed on fine roots or root tip of the
seedlings (Fig 6) If culture is successful
103 VoL 31 0 2 2(10
the detailed morphological observation is or the leaf litter under the tree is removed About required Potting medium can be dried by 10 g per plant of VA mycorrhizal biofertilizers is stopping watering to the pot After the host applied to the root hairs system and then plant wilt the dried soil containing spores covered with soil can be stored for a year at 4-5 0 C
3 For transplanting seedling simply sprinkle VA
Inoculation of Arbuscular Mycorrhizae mycorrhizal biofeliilizers adjacent to the plant roots and cover with soil l Seed inoculation- Most of cereals legume
sorghum cotton and vegetables are inoculated 4 VA mycorrhizal biofertilizers can be used in
with seed VAM culture containing infected root combination with several types of biofertilizers (Rhizobium PSB PGPR) bits viable AM-fungal propagules (including
spores) containing 8-10 viable sporesg VAM Problems and potential for VAM inoculum
culture 2 kglha is used production and utilization
2 Soil application- The AM or VAM culture should l Situation where effective indigenous VAM be applied to the open furrows 15 kglha using population is low
field soil to bulk the carrier This method is 2 Inoculation is best for transplanted crops where suitable for fruit crops and plantation crops For soil disturbances have reduced VAM
huit trees soil under the plant canopy is trenched inoculation potential
REFERENCES Al-Karaki GN and Clark RB (1990) Plant Nutr 22 1775-1784
Auge RM (2004) Canadian J Soil Sci 84 373-381
Bryla D Rand Duniway J M (1997) Plant Sai1197 85-108
Biro B etal (2000) Applied Sail Ecol 15 159-168
Borowicz VA (2001) Ecology82 3057-3068
Clark R B and Zeto S K (2000) J Plant Nutr 23 867-902
Gange A C eta (2005) Ecolagy86 603-611
Gange A C and West H M (1994) New Phytal 128 79-87
Gerdemann Jw and Nicolson T H (1963) Trans British MvcolagicaISac 46 235-244
Harley J L and Smith S E (1983) Mycorrhizal Symbiosis Academic Press London
Hwang S E etal (1993) Plant Dis 77 1093-1098
Hodge A (2000) FEMS Microbial Eco 32 91-96
Hodge A eta (2001) Nature 413 297-299
Jallali BL and Chand H (1987) in Proceedings of iSI Asian conference on Mycorrhizae at Madras (Mahadevan et
al Eds)p 209-214
Johansson J eta (2004) FEMS Microbial Eca 48 1-13
Karagiannidis N eta (2002) Sci Hart 94 145-156
Kasiamdari R S et al (2002) Plant and Soil 238 235-244
KjolIer R and Rosendahl S (1996) Mycorrhizae6 487-491
Koide R T eta (2000) NewPhytologyl48 163-168
Matsubara Y et al (2002) J Japan Soc Hod Sci 71 370-374
Morton J B and Benny G L (1990) Mycatoxan 37 471-491
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240
95 Va 31 No 2 2010
arbuscular mycorrhizal fungi (AMF) are given
in Table 1 This reduction in the severity of
diseases occurs rather than total inhibition This
can still result in a significant increase in yield
over plants and inoculated with AMF and occurs
despite the fact that pathogen infection generally
reduces AM colonization In some cases the
apparent resistance of a plant to a pest or disease
may be simply the result of improved nutrition
(Karagiannidis et al 2002) Once colonization
of a root cell by AMF occurs the pathogens are
excluded from that cell as a result the most
effective control is achieved when colonization
by mycorrhizal fungi takes place before attack
by pathogen (Sylvia and Chellemi 2001) Other
type of pest and diseases causing organisms
which may be suppressed by arbuscular
mycorrhizal fungi include pathogenic nematodes
((Talavera et ai 2001) above ground fungal
disease and herbivores (Gange et ai 2005) Though the mechanisms involved are complex
change in nutritional status resulting in changes
to leaf defensive chemicals are likely to be
involved in above ground interactions with
herbivores (Gange and West 1994)
4 Mycorrhizal fungi have an important role in
stabilizing soil aggregates which is especially
important in an agricultural context where
cultivation trafficking and low level of soil
organic matter all tend to result in damaged soil
structure The host plant transfers as much as
20 of all fixed C to the fungal partner and in
agricultural soils AMF can produce Significant
biomass Like other soil fungi AMF can produce
significant micro-aggregates into larger macroshy
aggregates through the enmeshing effect of there
hyphae In addition AMF produce an
extracellular glycoprotein (gooey protein)
glomalin which sticks hyphae to soil and is very
effective as a cementing agent (Rilling et al 2001) Whether glomalin is important or not
general hyphae exudation and rapid hyphae
turnover provide carbon to other soil
microorganisms indirectly promoting aggregate
stability The over all effect of hyphae
enmeshment and inputs can be significant
increase in soil structural stability (Piotrowski
eta 2004)
5 The soils contaminated with high levels of metals
or salts mycorrhizal protect the plants from
excessive uptake of there potential toxins It has
been thought that the heavy metals are bound
by carbonyl groups in the pectic compounds
(hemicelluloses) of the interfacial between the
fungus and the host cells It has also been
demonstrated that plants growing in mine spoils
with heavy metals
6 As well as interacting with disease causing soil
organisms AMF also interact with a whole range
of other microorganisms in soils Bacterial
communities and specific bacterial strains
promote germination of AM fungal spores and
can increase the rate and extent of root
colonization by AM fungi (Johansson et a 2004) Once the arbuscular symbiosis has
developed AM hyphae influence the surrounding
soil which has been termed the
mycorrhizosphere resulting in the development
of distinct microbial communities relative to the
rhizosphere and bulk soil Within the
mycorrhizosphere free living N fixing bacteria
and general plant growth promoting
rhizobacteria (PGPR) (Biro et a 2000) The legume-Rhizobium symbiosis is greatly
influenced by AMF and there is some evidence
to suggest that legume nodules contain AMF
communities quite distinct from those found in
the roots of legume (Scheublin eta 2004) The
Rhizobium symbiosis is dependent on high
concentration of P and so the enhanced P
nutrition arising from the AM colonization can
result in an increase in nodulation and N2 fixation (Vazquez et al2002)
7 It can be used together with other agricultural
chemicals to some extent Mycorrhizae are
endurable to several chemical substances eg
96 AGRICUTURAL REVlEWS
I hr n notlets
Figl Ectomycorrhizal association with plant roots Fig2 Endomycorrhizal association with plant roots
Source The Nature and Properties of Soils (lOthEd) by Nyle C Brady Prentice-Hall of India Private limited New Delhi
pesticides such as endrin chlorodane methyl
parathion methyl carbofuran herbicide such
as glyphosate fuazifopbutyl chemical agents for
plant disease elimination such as captan
benomyle maneb triforine mancozed and
zineb However the effect of biocides on the
arbuscular mycorrhizal association is complex
and not easily predictable Even the effect of
fungicides is not straight forward Sreenivasa and Bagyaraj (1989) tested the effect of nine fungicides on Glomus fasciculatum in pot trails
At their recommended application rates all fungicides reduced root colonization of Rhodes grass (Chloris gayana) by 12 to 25 and spore
production by 19 to 25 but at half the recommended rate Captan (Nshy
(trichloromethylthio) cyco-hex-4-ene-l2shydicarboximide) increased all measured
mycorrhizal parameters Udaiyan et a (1990) looked at the effect of six fungicides on
arbuscrlar mycorrhizal fungal colonization and
sporolation in three types of millet (Eleusine coracana Pankum miljaceum and Paspalum scrobiculatum) under field conditions At their
recommended application rates some reduced
root colonization and sporolation while others
had no effect or increased arbuscular
mycorrhizal colonization and sporolation
depending on the species of millet involved
However when applied for control of leaf fungal
diseases at their recommended rates they had
no effect on mycorrhizal colonization Indeed
paradoxically some fungicides are regularly
shown to have no deleterious effect on arbuscular
mycorrhizal fungi and in some cases increase
mycorrhizal colonization and nutrient uptake
especially at reduced application rate (Hwang
et a 1993)
Kinds of mycorrhizae- Two types mycorrhizal
associations are of considerable practical
importance
1 Ectomycorrhiza- Ectomycorhizae covers
roots and rootlets with a thick mantel of hyphae
The fungal sheath spreads between the cortical
cells of roots Their hyphae penetrate the roots
and develop in the free space around the cells of the cortex to form a complex intercellular system
called the harting net (Harley and Smith 1983)
but do not penetrate the cortex cell wall (hence
the term ecto meaning outside) Ectomycorhizae
cause the infected root system to consist primarily
of stubby white rootlets with a characteristics Y
shape (Fig 1)These might be due to the
production of auxins that are responsible for some
of the morphological differences between
97 Vol 31 No 2 2010
mycorrhizal and non-mycorrhizal roots
Ectomycorrhizae consists of septet fungal cells
belonging to the Basidiomycetes are dependent
on carbohydrates which are supplied by the root It has been shown that C14labelled photosynthates
are rapidly translocated not only to the roots but
also into the sheath and hyphae of mycorrhizal fungi Carbohydrates mainly in the form of
sucrose obtained from the host root are rapidly
converted into typical fungal sugars such
astrehalose or mannitol In this way the organic
carbon is trapped because these sugars are only
poorly reassimilated by the piant root It has been shown that the transport of assimilates from the
aerial plant parts towards the roots is higher in
mycorrhizal infected plants than in non infected
plants The mycorrhiza is thus a sink for
photosynthates
The ectomycorrhizae group includes
hundreds of different fungal species associated
primarily with temperate or semiarid region trees
and shrubs such as pine birch hemlock beech
oak spruce and fir Further research has shown
that some of the trees and in even some tree
legumes viz Alnus Cupressus Juniperus Acacia and Casuarina has been found to associate with
both ecto and ectendomycorrhizas which have
some characteristics of both ecto and
endomycorrhiza The external mantle may be
much reduced or even absent in some mycorrhiza
on trees The Harting net is well developed but
hypha also penetrates into cells of the host The
same fungus that produces ectomycorrhiza may
on a different host plant or under different
conditions from ectendomycorrhiza Inoculation with Pisolithus tintorius and Telephora terrestrius which is most important species of ectomycorrhiza is greatly enhanced the growth of temperate forest
trees
2 Endomycorrhiza The most important members of
endomycorrhiza group are called arbuscular
mycorrhizae (AM) Formerly these were called
vesicular arbuscular mycorrhizae (VAM) but this
was shortened to AM since fungal hyphae actually
penetrate the cortical root cell wall and once inside
the plant cell form small hyphae branched structures
known as arbuscules Fungi of the endomycorrhizae
consist of aseptet hyphae are members of the
Phycomycetes and Basidiomycetes The hyphae of
these fUhgi penetrate the cells of the root cortex
forming an internal hyphae network Some hyphae
also extend into the soil For many plant species
including most agricultural crops the predominant
type of fungal infection is vesicular arbuscular
mycorrhizae (VAM) This name derives from the
occurrence of two types of structures characteristics
of the fungi belongs to the family Endogonaceae
(Fig 2) The fungus may be considered as a twoshy
phase system with a mycelium in the cortex
Table 2 Endomycorrhizal associated and non associated crops
Mycorrhizal associated crops Group Crops
Cereals Corn sorghum wheat oat barley dryland rice Legumes Soybean alfalfa lentil peas clovers greengram black gram cow pea beans pigeon pea chick pea
ground nut Lucerne Vegetables Potato tomato brinjal chilli cucumber onion garlic bitter gourd ladies finger round gourd carrot Fruits Apple plum pear cherry peach grapes citrus mulberry strawberry papaya Forest trees Maple yellow poplar red wood Plantation crops Cocoa coffee rubber Others Cotton sugarcane cassava
Mycorrhizal not associated crops Group Crops Cruciferae Cabbage mustarded canola broccoli radish turnip Chenopodiaceae Sugar beet red beet spinach
98 AGRICUTURAL REVIEWS
Classification of mycorrhizae shyClassification of mycorrhizal fungi according to Morton and Benny (1990) is given as follows
1 Order
2 Sub order
3 Family
4 Genus
connected to an external mycelium in the
rhizosphere and soil It also shows the presence of
structures at different stages in development with a
shrub like appearance called arbuscles (arbuscula
Latin=shrub) These structures are similar to
haustoria but are produced by dichotomous
branching of hyphae These structures serve to
transfer mineral nutrients from the fungi to host plants
and sugars from the plant to the fungus The second
type of structure the Vesicle (Vesicula Latin=small
bladder) may be formed by swelling of the hyphae
and may occur within or between cells and serve as
storage organs for mycorrhizae The AM fungi are
the most common and widespread group Nearby
100 identified species of fungi from these
endomycorrhizal associations in soils from the tropics to the arctic (Table 2)
The members of Glominae suborder forming
intraradical vesicles and branched haustoria called
Entrophosphora
arbuscles in mycorrhizal roots spores born
terminally intercalarily and laterally form one or
more subtending hyphal is known as vesicular
arbuscular mycorrhizae (VAM) while as members
of Gigasporinae sub order do not form vesicles and
hence are arbuscular mycorrhizal fungi (AM)
Mechanisms of nutrients and water uptake-The association between the host and fungus
is well co-ordinated Young feeding do not roots
show any sign of damage when infected Indeed
the living root is essential for the culture of these
fungi The host plant supplying the fungus with
organic compounds and the fungus assisting the
roots in exploiting the soil for water and inorganic
nutrients The relationship is of particular
importance for phosphorus nutrition since
phosphate depletion zones can readily occur around
plant roots The network of hyphae extending from
the roots into the soil enlarges the contact area
- --- -~
VeSicle extraradicat
spore hyphae
- (- ) --2- - Jmij] ----- g-WCmiddotm-middot-middot-shy - null_~_ ~ v~=--------
soil root
Fig3 Schematic picture of AM fungi colonizing root and their hyphaI extension into soil
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACAl March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
between the bulk soil and the fungus-host root
association around depletion zone of soil thus create
a potential gradient against high concentration zone
from bulk of soil to the less concentrated depleted
zone by diffusion and hence facilitates a greater
uptake of phosphate It also indicates the possibility
that rate of phosphate uptake by the hyphae may
be higher than that by the root Phosphate translocation in the hyphae appears to be rapid
The phosphate is translocated in the form of small polyphosphate granules in the hyphae thus
maintaining low internal phosphate (Pi)
concentration by cytoplasmic streaming (Sorensen
et aJ 2005) Phosphate taken up by the fungus is
from the labile pool of soil phosphate and hence
from a readily available phosphate fraction
Mycorrhizal fungi may take up phosphate from less soluble phosphate which may be of particular
importance in acid tropical soils It has become
increasingly apparent that arbuscular mycorrhizae
fungi can be important in the uptake of other
nutrients by the host plant Zn Cu Fe N K Ca and Mg nutrition is most commonly reported as being
influenced by the mycorrhizal associations (Clark
and Zeto 2000)
Observation of arbuscular mycorrhizal fungi in roots
The structure of arbuscular mycorrhizal
fungus in roots is usually not observed without
appropriate staining Freshly collected root samples
should be washed gently and be free from soil
particles Roots are treated with 10 KOH solution for 30 minute to 1-2 hour in a hot bath depending on thickness of root structure Treated roots are
washed with water and treated with 2 HCI
solution Acidified root samples are stained with
0 05 trypan blue (or acid fuchsin) in lactic acid
for 10-15 minutes in a hot bath or for a few hours without heating (Phillip and Hayman 1970) The
roots are destained with lactic acid or lacto-glycerol
and are now ready for microscopic with transmitted
observation The stained roots may be observed first
under a dissecting microscope with transmitted
illumination and then observed under a compound microscope Fungal structures are stained and can
be easily recognized
100 AGRICUTURALREVIEWS
Table 3 Morphological character of AM or VAM fungal spores
Morphology Characteristics
Shape ( ie globular spher cal Irregular) Size Globular diameter (minimum-average-maximum) Irregular shape length x width (minimumshy
average-maximum) Hyphal attachment (ie sporiferous saccule bulbous suspensor etc) sporiferous saccule= Acaulospora
Entrophosphora bulbous suspensor = Gigaspora Scutellospora Auxiliary cell (presence = Gigaspora Scutellospora none ) Sporocarp (presence none) Germination shield (presence = Scutellospora absent) Surface ornamentation (ie smooth rough reticulate etc) Vesicle (Presence or absence in mycorrhizal roQts)
These characters should be recorded with careful observation of many spores
Glomus [Jiversispora Paraglomus
Acaulospora
Enlrophospora
-~~~
Gigaspora ( )gtgt
- ~ ~lbOUS suspensor
Sculeflospora
~gerrnination shield
fig 4 Morphology of representative genera of arbuscular mycorrhizal fungi
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
Isolation of spores from soils and their observation for identification
Spores of AM fu ngi in soil can be collected by the wet sieving and decanting method The gravity of spores is little than that of soil particles Successive decantation of soil suspension followed by sieving and with fine mesh can concentrate the spores from soil Since the spores are globular or sub-globular in 50-500 pm in diameter they in sievings can be recognized under a dissecting microscope
Equipments 1 Sieve Sieves with various mesh sizes At least
the following mesh sizes are required 1 mm 100
pm and 50 pm other size such as 500 pm and
250pm are preferable Stainless steel sieves are
commercially available However it is possible to make a plastic sieve with PVP tubes and
nylone mesh by yourself
2 Fine glass pipettes Tip of disposal glass Pasteur
pipette (1 ml) is softened with flame of a gas
burner and is sharpened Various sizes of tips
fitting to sizes of spores can be prepared
3 Forceps light fine tweezers is preferable
4 Dissecting microscope Stereoscopic zoom
microscope with bifurcated illuminator of fiber
arm is advisable Transmitted il lumination system is also needed
5 Compound microscope Biological compound
microscope is needed
Procedure 50 g of freshly collected soil sample is put
into 1 to 2 litres of plastic beakers Usually
rhizosphere soils are rich in arbuscular mycorrhizal
fungal spores Beaker size can be changed
depending on the soil sample size Soil is suspended
with about 500 ml to 1 litre of tap water Soil macroshy
aggregates should be crushed with hand after 10shy
30 seconds of setting down of soil particles the upper
layer of soil suspension is poured into the sieving
The procedure should be repeated until the upper
layer of soil suspension is transparent (Gerdemann
and Nicolson 1963) The sieving on the fine mesh
is collected into a small beaker and dispersed with
ultra sonication Weak sonication (ie 30 W 30 sec)
101 Vol 31 No 2 2010
is enough and strong sonication may destroy fungal spores Then the dispersed sample is again passed though the sieve Depending on the toughness of soil aggregate the sonication process can be
repeated UsuaUy AM fungal spores are collected
on 100um some small spores are on 50um To collect large spores such as Gigaspora margarita 250um sieve is efficient
Morphological observation of spores for identification
Morphology of spores is a basis for identification of arbuscular mycorrhizal fungi because the hyphae and the organs such as arbuscules and vesicles are not specific to species Spores collected from the soil often deteriorate so that they may be used only for tentative identification at genus level For detailed observation culturing the target AM fungus is required and the spores from pot culture should be used At least 30-50 spores from the same morphological spores type should be observed and more observation is required
1 Observation of intact spores under dissecting
microscope Spore collected from soil or
Rhizosphere Plant soil
1 (w ith roo ts)
Pl ant trap culture Sieving
Soil trap culture ~ I
-- r
1 i-~II (- soi l
~ I Sores
Fig 5 Methods tor trapping AM tungi
culturing medium is put in a watch glass or a
small Petri dish and their shape colour and the attachment to spores are observed Spores should be classified into each spore type based
upon morphology For each spore type detailed
observation is required
For colour description standard colour chart
such as soil colour chart or colour chart of
glomalean fungi (INVAM colour chart) should be
used The colour chart should be under the same
illumination as used for spore observation because
the colour itself is greatly affected by the
characteristics of illumination It should reminded
that attachment such as soporiferous saccule for
Acaulosporaceae and subtenting hyphae for
Gigasporaceae are often lost during collection of
spores from soil
2 Observation of spores mounted on slide glass
under a compound microscope Spores are
mounted with polyvinyle lactoglycerol (PVLG)
on a slide glass Several slides should be made
Intact and crushed spores mounted with PVLG
Polyvinyle alcohol (polymerization 1000-1500)
Fig 6 Single spore isolation
Source Biofertilizers Manual by FNCA Forum fo r Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
102 AGRICtITURAL REVIEWS
166 g is dissolved in 10 ml deionized water
Complete dissolution may need 6 hours at 80 dc The dissolved polyvinyle alcohol is mixed
with 10 ml of lactic acid and 1 ml of glycerol it
can be used more than a day after preparation
The Important morphological characters of AM
fungi is indicated in Tabie 3 and Fig 4
Culturing of AM fungi AM fungi need the symbiotic association
with plants for proliferation Therefore culturing AM
fungi is to indicate AM fungi to host plant and to
grow the inoculated plant For the AM fungal
inoculum spores collected from soil can be used
However spores in soil are not always active in
colonizing plants Therefore trapping culture is often
employed Soil of sieving of soil is used as medium
(Soil Trap Culture) To isolate AM fungi colonizing
roots mycorrhizal plants collected from field can be
transplanted to potting medium as Plant Trap Culture
(Fig 5) (Murakoshi et ai 1998)
1 Host plant Various mycotrophic plants can be
used viz leguminous species (Trifolium spp Medicago spp Lotus japonicus) (ie Lolium spp Paspalum notatum) and other herbaceous
species (ie Plantago spp) Onion and leek
(Alliumspp ) and maize sorghum are also good
hosts
2 Growth condition Any conditions which support good growth of host plant plants are acceptable To avoid contamination a growth chamber is preferred If green house is used it should be kept clean It should be kept clean It should be remanded that cross-contamination or contamination from dust is inevitable under open-air conditions even in growth chamber To prevent cross-contamination from other pot culture in the same chamber use of plastic bag is advisable (Walker and Vestberg 1994)
3 Procedure A Plant Trap Culture
i Rhizosphere soil is collected with shoots of
trap plant cut at the crown and roots are
finely chopped and mixed with the soils using
a sharp chopper
ii The chopped roots and soil are mixed l1 (vv )
with autoclav ed coarse sand in a
mechanical mixer or massaged well in a jurable plastic bag
iii The soil mix is then transferred to a 15 cm plastic
pot
Iv Plants seeds of suitable trap plants such tropical signal grass into the pot
as
v The pot cultures are maintained in a green house
for at least 3 months and check sporulation
from time to time By the fourth month AMF
sporulation may be at the peak Sanitary tests may also be carried out to ensure no
contamination from parasitic fungi occurs
vi Keep fertilizer application to a minimum to
encourage AMF proliferation
vii Trap culture pots are later left to dry under shade
for up to two weeks
viiiHarvest the spores using the sieving and
decanting techniques or the denSity-gradient
centrifugation technique
ix The mono specification spores are ready for
inoculation onto seedlings of the desired crops
B Single spore isolation To purify an isolated
fungus single spore isolation is needed
Even if the spores are morphologically
identical it often contains contaminants
whose morphology is very similar For single
spore isolation no specific equipment is
needed For effic ient handling two sets of
dissecting microscope are placed side by
side One microscope is for picking up
single spore from spores in a dish Another
is for inoculation of a spore on roots S
seedling placed in the pot is placed under
another microscope Under the fist
microscope single spore is picked up and
transferred under the second microscope
Under the second microscope the spore is
placed on fine roots or root tip of the
seedlings (Fig 6) If culture is successful
103 VoL 31 0 2 2(10
the detailed morphological observation is or the leaf litter under the tree is removed About required Potting medium can be dried by 10 g per plant of VA mycorrhizal biofertilizers is stopping watering to the pot After the host applied to the root hairs system and then plant wilt the dried soil containing spores covered with soil can be stored for a year at 4-5 0 C
3 For transplanting seedling simply sprinkle VA
Inoculation of Arbuscular Mycorrhizae mycorrhizal biofeliilizers adjacent to the plant roots and cover with soil l Seed inoculation- Most of cereals legume
sorghum cotton and vegetables are inoculated 4 VA mycorrhizal biofertilizers can be used in
with seed VAM culture containing infected root combination with several types of biofertilizers (Rhizobium PSB PGPR) bits viable AM-fungal propagules (including
spores) containing 8-10 viable sporesg VAM Problems and potential for VAM inoculum
culture 2 kglha is used production and utilization
2 Soil application- The AM or VAM culture should l Situation where effective indigenous VAM be applied to the open furrows 15 kglha using population is low
field soil to bulk the carrier This method is 2 Inoculation is best for transplanted crops where suitable for fruit crops and plantation crops For soil disturbances have reduced VAM
huit trees soil under the plant canopy is trenched inoculation potential
REFERENCES Al-Karaki GN and Clark RB (1990) Plant Nutr 22 1775-1784
Auge RM (2004) Canadian J Soil Sci 84 373-381
Bryla D Rand Duniway J M (1997) Plant Sai1197 85-108
Biro B etal (2000) Applied Sail Ecol 15 159-168
Borowicz VA (2001) Ecology82 3057-3068
Clark R B and Zeto S K (2000) J Plant Nutr 23 867-902
Gange A C eta (2005) Ecolagy86 603-611
Gange A C and West H M (1994) New Phytal 128 79-87
Gerdemann Jw and Nicolson T H (1963) Trans British MvcolagicaISac 46 235-244
Harley J L and Smith S E (1983) Mycorrhizal Symbiosis Academic Press London
Hwang S E etal (1993) Plant Dis 77 1093-1098
Hodge A (2000) FEMS Microbial Eco 32 91-96
Hodge A eta (2001) Nature 413 297-299
Jallali BL and Chand H (1987) in Proceedings of iSI Asian conference on Mycorrhizae at Madras (Mahadevan et
al Eds)p 209-214
Johansson J eta (2004) FEMS Microbial Eca 48 1-13
Karagiannidis N eta (2002) Sci Hart 94 145-156
Kasiamdari R S et al (2002) Plant and Soil 238 235-244
KjolIer R and Rosendahl S (1996) Mycorrhizae6 487-491
Koide R T eta (2000) NewPhytologyl48 163-168
Matsubara Y et al (2002) J Japan Soc Hod Sci 71 370-374
Morton J B and Benny G L (1990) Mycatoxan 37 471-491
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240
96 AGRICUTURAL REVlEWS
I hr n notlets
Figl Ectomycorrhizal association with plant roots Fig2 Endomycorrhizal association with plant roots
Source The Nature and Properties of Soils (lOthEd) by Nyle C Brady Prentice-Hall of India Private limited New Delhi
pesticides such as endrin chlorodane methyl
parathion methyl carbofuran herbicide such
as glyphosate fuazifopbutyl chemical agents for
plant disease elimination such as captan
benomyle maneb triforine mancozed and
zineb However the effect of biocides on the
arbuscular mycorrhizal association is complex
and not easily predictable Even the effect of
fungicides is not straight forward Sreenivasa and Bagyaraj (1989) tested the effect of nine fungicides on Glomus fasciculatum in pot trails
At their recommended application rates all fungicides reduced root colonization of Rhodes grass (Chloris gayana) by 12 to 25 and spore
production by 19 to 25 but at half the recommended rate Captan (Nshy
(trichloromethylthio) cyco-hex-4-ene-l2shydicarboximide) increased all measured
mycorrhizal parameters Udaiyan et a (1990) looked at the effect of six fungicides on
arbuscrlar mycorrhizal fungal colonization and
sporolation in three types of millet (Eleusine coracana Pankum miljaceum and Paspalum scrobiculatum) under field conditions At their
recommended application rates some reduced
root colonization and sporolation while others
had no effect or increased arbuscular
mycorrhizal colonization and sporolation
depending on the species of millet involved
However when applied for control of leaf fungal
diseases at their recommended rates they had
no effect on mycorrhizal colonization Indeed
paradoxically some fungicides are regularly
shown to have no deleterious effect on arbuscular
mycorrhizal fungi and in some cases increase
mycorrhizal colonization and nutrient uptake
especially at reduced application rate (Hwang
et a 1993)
Kinds of mycorrhizae- Two types mycorrhizal
associations are of considerable practical
importance
1 Ectomycorrhiza- Ectomycorhizae covers
roots and rootlets with a thick mantel of hyphae
The fungal sheath spreads between the cortical
cells of roots Their hyphae penetrate the roots
and develop in the free space around the cells of the cortex to form a complex intercellular system
called the harting net (Harley and Smith 1983)
but do not penetrate the cortex cell wall (hence
the term ecto meaning outside) Ectomycorhizae
cause the infected root system to consist primarily
of stubby white rootlets with a characteristics Y
shape (Fig 1)These might be due to the
production of auxins that are responsible for some
of the morphological differences between
97 Vol 31 No 2 2010
mycorrhizal and non-mycorrhizal roots
Ectomycorrhizae consists of septet fungal cells
belonging to the Basidiomycetes are dependent
on carbohydrates which are supplied by the root It has been shown that C14labelled photosynthates
are rapidly translocated not only to the roots but
also into the sheath and hyphae of mycorrhizal fungi Carbohydrates mainly in the form of
sucrose obtained from the host root are rapidly
converted into typical fungal sugars such
astrehalose or mannitol In this way the organic
carbon is trapped because these sugars are only
poorly reassimilated by the piant root It has been shown that the transport of assimilates from the
aerial plant parts towards the roots is higher in
mycorrhizal infected plants than in non infected
plants The mycorrhiza is thus a sink for
photosynthates
The ectomycorrhizae group includes
hundreds of different fungal species associated
primarily with temperate or semiarid region trees
and shrubs such as pine birch hemlock beech
oak spruce and fir Further research has shown
that some of the trees and in even some tree
legumes viz Alnus Cupressus Juniperus Acacia and Casuarina has been found to associate with
both ecto and ectendomycorrhizas which have
some characteristics of both ecto and
endomycorrhiza The external mantle may be
much reduced or even absent in some mycorrhiza
on trees The Harting net is well developed but
hypha also penetrates into cells of the host The
same fungus that produces ectomycorrhiza may
on a different host plant or under different
conditions from ectendomycorrhiza Inoculation with Pisolithus tintorius and Telephora terrestrius which is most important species of ectomycorrhiza is greatly enhanced the growth of temperate forest
trees
2 Endomycorrhiza The most important members of
endomycorrhiza group are called arbuscular
mycorrhizae (AM) Formerly these were called
vesicular arbuscular mycorrhizae (VAM) but this
was shortened to AM since fungal hyphae actually
penetrate the cortical root cell wall and once inside
the plant cell form small hyphae branched structures
known as arbuscules Fungi of the endomycorrhizae
consist of aseptet hyphae are members of the
Phycomycetes and Basidiomycetes The hyphae of
these fUhgi penetrate the cells of the root cortex
forming an internal hyphae network Some hyphae
also extend into the soil For many plant species
including most agricultural crops the predominant
type of fungal infection is vesicular arbuscular
mycorrhizae (VAM) This name derives from the
occurrence of two types of structures characteristics
of the fungi belongs to the family Endogonaceae
(Fig 2) The fungus may be considered as a twoshy
phase system with a mycelium in the cortex
Table 2 Endomycorrhizal associated and non associated crops
Mycorrhizal associated crops Group Crops
Cereals Corn sorghum wheat oat barley dryland rice Legumes Soybean alfalfa lentil peas clovers greengram black gram cow pea beans pigeon pea chick pea
ground nut Lucerne Vegetables Potato tomato brinjal chilli cucumber onion garlic bitter gourd ladies finger round gourd carrot Fruits Apple plum pear cherry peach grapes citrus mulberry strawberry papaya Forest trees Maple yellow poplar red wood Plantation crops Cocoa coffee rubber Others Cotton sugarcane cassava
Mycorrhizal not associated crops Group Crops Cruciferae Cabbage mustarded canola broccoli radish turnip Chenopodiaceae Sugar beet red beet spinach
98 AGRICUTURAL REVIEWS
Classification of mycorrhizae shyClassification of mycorrhizal fungi according to Morton and Benny (1990) is given as follows
1 Order
2 Sub order
3 Family
4 Genus
connected to an external mycelium in the
rhizosphere and soil It also shows the presence of
structures at different stages in development with a
shrub like appearance called arbuscles (arbuscula
Latin=shrub) These structures are similar to
haustoria but are produced by dichotomous
branching of hyphae These structures serve to
transfer mineral nutrients from the fungi to host plants
and sugars from the plant to the fungus The second
type of structure the Vesicle (Vesicula Latin=small
bladder) may be formed by swelling of the hyphae
and may occur within or between cells and serve as
storage organs for mycorrhizae The AM fungi are
the most common and widespread group Nearby
100 identified species of fungi from these
endomycorrhizal associations in soils from the tropics to the arctic (Table 2)
The members of Glominae suborder forming
intraradical vesicles and branched haustoria called
Entrophosphora
arbuscles in mycorrhizal roots spores born
terminally intercalarily and laterally form one or
more subtending hyphal is known as vesicular
arbuscular mycorrhizae (VAM) while as members
of Gigasporinae sub order do not form vesicles and
hence are arbuscular mycorrhizal fungi (AM)
Mechanisms of nutrients and water uptake-The association between the host and fungus
is well co-ordinated Young feeding do not roots
show any sign of damage when infected Indeed
the living root is essential for the culture of these
fungi The host plant supplying the fungus with
organic compounds and the fungus assisting the
roots in exploiting the soil for water and inorganic
nutrients The relationship is of particular
importance for phosphorus nutrition since
phosphate depletion zones can readily occur around
plant roots The network of hyphae extending from
the roots into the soil enlarges the contact area
- --- -~
VeSicle extraradicat
spore hyphae
- (- ) --2- - Jmij] ----- g-WCmiddotm-middot-middot-shy - null_~_ ~ v~=--------
soil root
Fig3 Schematic picture of AM fungi colonizing root and their hyphaI extension into soil
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACAl March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
between the bulk soil and the fungus-host root
association around depletion zone of soil thus create
a potential gradient against high concentration zone
from bulk of soil to the less concentrated depleted
zone by diffusion and hence facilitates a greater
uptake of phosphate It also indicates the possibility
that rate of phosphate uptake by the hyphae may
be higher than that by the root Phosphate translocation in the hyphae appears to be rapid
The phosphate is translocated in the form of small polyphosphate granules in the hyphae thus
maintaining low internal phosphate (Pi)
concentration by cytoplasmic streaming (Sorensen
et aJ 2005) Phosphate taken up by the fungus is
from the labile pool of soil phosphate and hence
from a readily available phosphate fraction
Mycorrhizal fungi may take up phosphate from less soluble phosphate which may be of particular
importance in acid tropical soils It has become
increasingly apparent that arbuscular mycorrhizae
fungi can be important in the uptake of other
nutrients by the host plant Zn Cu Fe N K Ca and Mg nutrition is most commonly reported as being
influenced by the mycorrhizal associations (Clark
and Zeto 2000)
Observation of arbuscular mycorrhizal fungi in roots
The structure of arbuscular mycorrhizal
fungus in roots is usually not observed without
appropriate staining Freshly collected root samples
should be washed gently and be free from soil
particles Roots are treated with 10 KOH solution for 30 minute to 1-2 hour in a hot bath depending on thickness of root structure Treated roots are
washed with water and treated with 2 HCI
solution Acidified root samples are stained with
0 05 trypan blue (or acid fuchsin) in lactic acid
for 10-15 minutes in a hot bath or for a few hours without heating (Phillip and Hayman 1970) The
roots are destained with lactic acid or lacto-glycerol
and are now ready for microscopic with transmitted
observation The stained roots may be observed first
under a dissecting microscope with transmitted
illumination and then observed under a compound microscope Fungal structures are stained and can
be easily recognized
100 AGRICUTURALREVIEWS
Table 3 Morphological character of AM or VAM fungal spores
Morphology Characteristics
Shape ( ie globular spher cal Irregular) Size Globular diameter (minimum-average-maximum) Irregular shape length x width (minimumshy
average-maximum) Hyphal attachment (ie sporiferous saccule bulbous suspensor etc) sporiferous saccule= Acaulospora
Entrophosphora bulbous suspensor = Gigaspora Scutellospora Auxiliary cell (presence = Gigaspora Scutellospora none ) Sporocarp (presence none) Germination shield (presence = Scutellospora absent) Surface ornamentation (ie smooth rough reticulate etc) Vesicle (Presence or absence in mycorrhizal roQts)
These characters should be recorded with careful observation of many spores
Glomus [Jiversispora Paraglomus
Acaulospora
Enlrophospora
-~~~
Gigaspora ( )gtgt
- ~ ~lbOUS suspensor
Sculeflospora
~gerrnination shield
fig 4 Morphology of representative genera of arbuscular mycorrhizal fungi
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
Isolation of spores from soils and their observation for identification
Spores of AM fu ngi in soil can be collected by the wet sieving and decanting method The gravity of spores is little than that of soil particles Successive decantation of soil suspension followed by sieving and with fine mesh can concentrate the spores from soil Since the spores are globular or sub-globular in 50-500 pm in diameter they in sievings can be recognized under a dissecting microscope
Equipments 1 Sieve Sieves with various mesh sizes At least
the following mesh sizes are required 1 mm 100
pm and 50 pm other size such as 500 pm and
250pm are preferable Stainless steel sieves are
commercially available However it is possible to make a plastic sieve with PVP tubes and
nylone mesh by yourself
2 Fine glass pipettes Tip of disposal glass Pasteur
pipette (1 ml) is softened with flame of a gas
burner and is sharpened Various sizes of tips
fitting to sizes of spores can be prepared
3 Forceps light fine tweezers is preferable
4 Dissecting microscope Stereoscopic zoom
microscope with bifurcated illuminator of fiber
arm is advisable Transmitted il lumination system is also needed
5 Compound microscope Biological compound
microscope is needed
Procedure 50 g of freshly collected soil sample is put
into 1 to 2 litres of plastic beakers Usually
rhizosphere soils are rich in arbuscular mycorrhizal
fungal spores Beaker size can be changed
depending on the soil sample size Soil is suspended
with about 500 ml to 1 litre of tap water Soil macroshy
aggregates should be crushed with hand after 10shy
30 seconds of setting down of soil particles the upper
layer of soil suspension is poured into the sieving
The procedure should be repeated until the upper
layer of soil suspension is transparent (Gerdemann
and Nicolson 1963) The sieving on the fine mesh
is collected into a small beaker and dispersed with
ultra sonication Weak sonication (ie 30 W 30 sec)
101 Vol 31 No 2 2010
is enough and strong sonication may destroy fungal spores Then the dispersed sample is again passed though the sieve Depending on the toughness of soil aggregate the sonication process can be
repeated UsuaUy AM fungal spores are collected
on 100um some small spores are on 50um To collect large spores such as Gigaspora margarita 250um sieve is efficient
Morphological observation of spores for identification
Morphology of spores is a basis for identification of arbuscular mycorrhizal fungi because the hyphae and the organs such as arbuscules and vesicles are not specific to species Spores collected from the soil often deteriorate so that they may be used only for tentative identification at genus level For detailed observation culturing the target AM fungus is required and the spores from pot culture should be used At least 30-50 spores from the same morphological spores type should be observed and more observation is required
1 Observation of intact spores under dissecting
microscope Spore collected from soil or
Rhizosphere Plant soil
1 (w ith roo ts)
Pl ant trap culture Sieving
Soil trap culture ~ I
-- r
1 i-~II (- soi l
~ I Sores
Fig 5 Methods tor trapping AM tungi
culturing medium is put in a watch glass or a
small Petri dish and their shape colour and the attachment to spores are observed Spores should be classified into each spore type based
upon morphology For each spore type detailed
observation is required
For colour description standard colour chart
such as soil colour chart or colour chart of
glomalean fungi (INVAM colour chart) should be
used The colour chart should be under the same
illumination as used for spore observation because
the colour itself is greatly affected by the
characteristics of illumination It should reminded
that attachment such as soporiferous saccule for
Acaulosporaceae and subtenting hyphae for
Gigasporaceae are often lost during collection of
spores from soil
2 Observation of spores mounted on slide glass
under a compound microscope Spores are
mounted with polyvinyle lactoglycerol (PVLG)
on a slide glass Several slides should be made
Intact and crushed spores mounted with PVLG
Polyvinyle alcohol (polymerization 1000-1500)
Fig 6 Single spore isolation
Source Biofertilizers Manual by FNCA Forum fo r Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
102 AGRICtITURAL REVIEWS
166 g is dissolved in 10 ml deionized water
Complete dissolution may need 6 hours at 80 dc The dissolved polyvinyle alcohol is mixed
with 10 ml of lactic acid and 1 ml of glycerol it
can be used more than a day after preparation
The Important morphological characters of AM
fungi is indicated in Tabie 3 and Fig 4
Culturing of AM fungi AM fungi need the symbiotic association
with plants for proliferation Therefore culturing AM
fungi is to indicate AM fungi to host plant and to
grow the inoculated plant For the AM fungal
inoculum spores collected from soil can be used
However spores in soil are not always active in
colonizing plants Therefore trapping culture is often
employed Soil of sieving of soil is used as medium
(Soil Trap Culture) To isolate AM fungi colonizing
roots mycorrhizal plants collected from field can be
transplanted to potting medium as Plant Trap Culture
(Fig 5) (Murakoshi et ai 1998)
1 Host plant Various mycotrophic plants can be
used viz leguminous species (Trifolium spp Medicago spp Lotus japonicus) (ie Lolium spp Paspalum notatum) and other herbaceous
species (ie Plantago spp) Onion and leek
(Alliumspp ) and maize sorghum are also good
hosts
2 Growth condition Any conditions which support good growth of host plant plants are acceptable To avoid contamination a growth chamber is preferred If green house is used it should be kept clean It should be kept clean It should be remanded that cross-contamination or contamination from dust is inevitable under open-air conditions even in growth chamber To prevent cross-contamination from other pot culture in the same chamber use of plastic bag is advisable (Walker and Vestberg 1994)
3 Procedure A Plant Trap Culture
i Rhizosphere soil is collected with shoots of
trap plant cut at the crown and roots are
finely chopped and mixed with the soils using
a sharp chopper
ii The chopped roots and soil are mixed l1 (vv )
with autoclav ed coarse sand in a
mechanical mixer or massaged well in a jurable plastic bag
iii The soil mix is then transferred to a 15 cm plastic
pot
Iv Plants seeds of suitable trap plants such tropical signal grass into the pot
as
v The pot cultures are maintained in a green house
for at least 3 months and check sporulation
from time to time By the fourth month AMF
sporulation may be at the peak Sanitary tests may also be carried out to ensure no
contamination from parasitic fungi occurs
vi Keep fertilizer application to a minimum to
encourage AMF proliferation
vii Trap culture pots are later left to dry under shade
for up to two weeks
viiiHarvest the spores using the sieving and
decanting techniques or the denSity-gradient
centrifugation technique
ix The mono specification spores are ready for
inoculation onto seedlings of the desired crops
B Single spore isolation To purify an isolated
fungus single spore isolation is needed
Even if the spores are morphologically
identical it often contains contaminants
whose morphology is very similar For single
spore isolation no specific equipment is
needed For effic ient handling two sets of
dissecting microscope are placed side by
side One microscope is for picking up
single spore from spores in a dish Another
is for inoculation of a spore on roots S
seedling placed in the pot is placed under
another microscope Under the fist
microscope single spore is picked up and
transferred under the second microscope
Under the second microscope the spore is
placed on fine roots or root tip of the
seedlings (Fig 6) If culture is successful
103 VoL 31 0 2 2(10
the detailed morphological observation is or the leaf litter under the tree is removed About required Potting medium can be dried by 10 g per plant of VA mycorrhizal biofertilizers is stopping watering to the pot After the host applied to the root hairs system and then plant wilt the dried soil containing spores covered with soil can be stored for a year at 4-5 0 C
3 For transplanting seedling simply sprinkle VA
Inoculation of Arbuscular Mycorrhizae mycorrhizal biofeliilizers adjacent to the plant roots and cover with soil l Seed inoculation- Most of cereals legume
sorghum cotton and vegetables are inoculated 4 VA mycorrhizal biofertilizers can be used in
with seed VAM culture containing infected root combination with several types of biofertilizers (Rhizobium PSB PGPR) bits viable AM-fungal propagules (including
spores) containing 8-10 viable sporesg VAM Problems and potential for VAM inoculum
culture 2 kglha is used production and utilization
2 Soil application- The AM or VAM culture should l Situation where effective indigenous VAM be applied to the open furrows 15 kglha using population is low
field soil to bulk the carrier This method is 2 Inoculation is best for transplanted crops where suitable for fruit crops and plantation crops For soil disturbances have reduced VAM
huit trees soil under the plant canopy is trenched inoculation potential
REFERENCES Al-Karaki GN and Clark RB (1990) Plant Nutr 22 1775-1784
Auge RM (2004) Canadian J Soil Sci 84 373-381
Bryla D Rand Duniway J M (1997) Plant Sai1197 85-108
Biro B etal (2000) Applied Sail Ecol 15 159-168
Borowicz VA (2001) Ecology82 3057-3068
Clark R B and Zeto S K (2000) J Plant Nutr 23 867-902
Gange A C eta (2005) Ecolagy86 603-611
Gange A C and West H M (1994) New Phytal 128 79-87
Gerdemann Jw and Nicolson T H (1963) Trans British MvcolagicaISac 46 235-244
Harley J L and Smith S E (1983) Mycorrhizal Symbiosis Academic Press London
Hwang S E etal (1993) Plant Dis 77 1093-1098
Hodge A (2000) FEMS Microbial Eco 32 91-96
Hodge A eta (2001) Nature 413 297-299
Jallali BL and Chand H (1987) in Proceedings of iSI Asian conference on Mycorrhizae at Madras (Mahadevan et
al Eds)p 209-214
Johansson J eta (2004) FEMS Microbial Eca 48 1-13
Karagiannidis N eta (2002) Sci Hart 94 145-156
Kasiamdari R S et al (2002) Plant and Soil 238 235-244
KjolIer R and Rosendahl S (1996) Mycorrhizae6 487-491
Koide R T eta (2000) NewPhytologyl48 163-168
Matsubara Y et al (2002) J Japan Soc Hod Sci 71 370-374
Morton J B and Benny G L (1990) Mycatoxan 37 471-491
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240
97 Vol 31 No 2 2010
mycorrhizal and non-mycorrhizal roots
Ectomycorrhizae consists of septet fungal cells
belonging to the Basidiomycetes are dependent
on carbohydrates which are supplied by the root It has been shown that C14labelled photosynthates
are rapidly translocated not only to the roots but
also into the sheath and hyphae of mycorrhizal fungi Carbohydrates mainly in the form of
sucrose obtained from the host root are rapidly
converted into typical fungal sugars such
astrehalose or mannitol In this way the organic
carbon is trapped because these sugars are only
poorly reassimilated by the piant root It has been shown that the transport of assimilates from the
aerial plant parts towards the roots is higher in
mycorrhizal infected plants than in non infected
plants The mycorrhiza is thus a sink for
photosynthates
The ectomycorrhizae group includes
hundreds of different fungal species associated
primarily with temperate or semiarid region trees
and shrubs such as pine birch hemlock beech
oak spruce and fir Further research has shown
that some of the trees and in even some tree
legumes viz Alnus Cupressus Juniperus Acacia and Casuarina has been found to associate with
both ecto and ectendomycorrhizas which have
some characteristics of both ecto and
endomycorrhiza The external mantle may be
much reduced or even absent in some mycorrhiza
on trees The Harting net is well developed but
hypha also penetrates into cells of the host The
same fungus that produces ectomycorrhiza may
on a different host plant or under different
conditions from ectendomycorrhiza Inoculation with Pisolithus tintorius and Telephora terrestrius which is most important species of ectomycorrhiza is greatly enhanced the growth of temperate forest
trees
2 Endomycorrhiza The most important members of
endomycorrhiza group are called arbuscular
mycorrhizae (AM) Formerly these were called
vesicular arbuscular mycorrhizae (VAM) but this
was shortened to AM since fungal hyphae actually
penetrate the cortical root cell wall and once inside
the plant cell form small hyphae branched structures
known as arbuscules Fungi of the endomycorrhizae
consist of aseptet hyphae are members of the
Phycomycetes and Basidiomycetes The hyphae of
these fUhgi penetrate the cells of the root cortex
forming an internal hyphae network Some hyphae
also extend into the soil For many plant species
including most agricultural crops the predominant
type of fungal infection is vesicular arbuscular
mycorrhizae (VAM) This name derives from the
occurrence of two types of structures characteristics
of the fungi belongs to the family Endogonaceae
(Fig 2) The fungus may be considered as a twoshy
phase system with a mycelium in the cortex
Table 2 Endomycorrhizal associated and non associated crops
Mycorrhizal associated crops Group Crops
Cereals Corn sorghum wheat oat barley dryland rice Legumes Soybean alfalfa lentil peas clovers greengram black gram cow pea beans pigeon pea chick pea
ground nut Lucerne Vegetables Potato tomato brinjal chilli cucumber onion garlic bitter gourd ladies finger round gourd carrot Fruits Apple plum pear cherry peach grapes citrus mulberry strawberry papaya Forest trees Maple yellow poplar red wood Plantation crops Cocoa coffee rubber Others Cotton sugarcane cassava
Mycorrhizal not associated crops Group Crops Cruciferae Cabbage mustarded canola broccoli radish turnip Chenopodiaceae Sugar beet red beet spinach
98 AGRICUTURAL REVIEWS
Classification of mycorrhizae shyClassification of mycorrhizal fungi according to Morton and Benny (1990) is given as follows
1 Order
2 Sub order
3 Family
4 Genus
connected to an external mycelium in the
rhizosphere and soil It also shows the presence of
structures at different stages in development with a
shrub like appearance called arbuscles (arbuscula
Latin=shrub) These structures are similar to
haustoria but are produced by dichotomous
branching of hyphae These structures serve to
transfer mineral nutrients from the fungi to host plants
and sugars from the plant to the fungus The second
type of structure the Vesicle (Vesicula Latin=small
bladder) may be formed by swelling of the hyphae
and may occur within or between cells and serve as
storage organs for mycorrhizae The AM fungi are
the most common and widespread group Nearby
100 identified species of fungi from these
endomycorrhizal associations in soils from the tropics to the arctic (Table 2)
The members of Glominae suborder forming
intraradical vesicles and branched haustoria called
Entrophosphora
arbuscles in mycorrhizal roots spores born
terminally intercalarily and laterally form one or
more subtending hyphal is known as vesicular
arbuscular mycorrhizae (VAM) while as members
of Gigasporinae sub order do not form vesicles and
hence are arbuscular mycorrhizal fungi (AM)
Mechanisms of nutrients and water uptake-The association between the host and fungus
is well co-ordinated Young feeding do not roots
show any sign of damage when infected Indeed
the living root is essential for the culture of these
fungi The host plant supplying the fungus with
organic compounds and the fungus assisting the
roots in exploiting the soil for water and inorganic
nutrients The relationship is of particular
importance for phosphorus nutrition since
phosphate depletion zones can readily occur around
plant roots The network of hyphae extending from
the roots into the soil enlarges the contact area
- --- -~
VeSicle extraradicat
spore hyphae
- (- ) --2- - Jmij] ----- g-WCmiddotm-middot-middot-shy - null_~_ ~ v~=--------
soil root
Fig3 Schematic picture of AM fungi colonizing root and their hyphaI extension into soil
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACAl March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
between the bulk soil and the fungus-host root
association around depletion zone of soil thus create
a potential gradient against high concentration zone
from bulk of soil to the less concentrated depleted
zone by diffusion and hence facilitates a greater
uptake of phosphate It also indicates the possibility
that rate of phosphate uptake by the hyphae may
be higher than that by the root Phosphate translocation in the hyphae appears to be rapid
The phosphate is translocated in the form of small polyphosphate granules in the hyphae thus
maintaining low internal phosphate (Pi)
concentration by cytoplasmic streaming (Sorensen
et aJ 2005) Phosphate taken up by the fungus is
from the labile pool of soil phosphate and hence
from a readily available phosphate fraction
Mycorrhizal fungi may take up phosphate from less soluble phosphate which may be of particular
importance in acid tropical soils It has become
increasingly apparent that arbuscular mycorrhizae
fungi can be important in the uptake of other
nutrients by the host plant Zn Cu Fe N K Ca and Mg nutrition is most commonly reported as being
influenced by the mycorrhizal associations (Clark
and Zeto 2000)
Observation of arbuscular mycorrhizal fungi in roots
The structure of arbuscular mycorrhizal
fungus in roots is usually not observed without
appropriate staining Freshly collected root samples
should be washed gently and be free from soil
particles Roots are treated with 10 KOH solution for 30 minute to 1-2 hour in a hot bath depending on thickness of root structure Treated roots are
washed with water and treated with 2 HCI
solution Acidified root samples are stained with
0 05 trypan blue (or acid fuchsin) in lactic acid
for 10-15 minutes in a hot bath or for a few hours without heating (Phillip and Hayman 1970) The
roots are destained with lactic acid or lacto-glycerol
and are now ready for microscopic with transmitted
observation The stained roots may be observed first
under a dissecting microscope with transmitted
illumination and then observed under a compound microscope Fungal structures are stained and can
be easily recognized
100 AGRICUTURALREVIEWS
Table 3 Morphological character of AM or VAM fungal spores
Morphology Characteristics
Shape ( ie globular spher cal Irregular) Size Globular diameter (minimum-average-maximum) Irregular shape length x width (minimumshy
average-maximum) Hyphal attachment (ie sporiferous saccule bulbous suspensor etc) sporiferous saccule= Acaulospora
Entrophosphora bulbous suspensor = Gigaspora Scutellospora Auxiliary cell (presence = Gigaspora Scutellospora none ) Sporocarp (presence none) Germination shield (presence = Scutellospora absent) Surface ornamentation (ie smooth rough reticulate etc) Vesicle (Presence or absence in mycorrhizal roQts)
These characters should be recorded with careful observation of many spores
Glomus [Jiversispora Paraglomus
Acaulospora
Enlrophospora
-~~~
Gigaspora ( )gtgt
- ~ ~lbOUS suspensor
Sculeflospora
~gerrnination shield
fig 4 Morphology of representative genera of arbuscular mycorrhizal fungi
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
Isolation of spores from soils and their observation for identification
Spores of AM fu ngi in soil can be collected by the wet sieving and decanting method The gravity of spores is little than that of soil particles Successive decantation of soil suspension followed by sieving and with fine mesh can concentrate the spores from soil Since the spores are globular or sub-globular in 50-500 pm in diameter they in sievings can be recognized under a dissecting microscope
Equipments 1 Sieve Sieves with various mesh sizes At least
the following mesh sizes are required 1 mm 100
pm and 50 pm other size such as 500 pm and
250pm are preferable Stainless steel sieves are
commercially available However it is possible to make a plastic sieve with PVP tubes and
nylone mesh by yourself
2 Fine glass pipettes Tip of disposal glass Pasteur
pipette (1 ml) is softened with flame of a gas
burner and is sharpened Various sizes of tips
fitting to sizes of spores can be prepared
3 Forceps light fine tweezers is preferable
4 Dissecting microscope Stereoscopic zoom
microscope with bifurcated illuminator of fiber
arm is advisable Transmitted il lumination system is also needed
5 Compound microscope Biological compound
microscope is needed
Procedure 50 g of freshly collected soil sample is put
into 1 to 2 litres of plastic beakers Usually
rhizosphere soils are rich in arbuscular mycorrhizal
fungal spores Beaker size can be changed
depending on the soil sample size Soil is suspended
with about 500 ml to 1 litre of tap water Soil macroshy
aggregates should be crushed with hand after 10shy
30 seconds of setting down of soil particles the upper
layer of soil suspension is poured into the sieving
The procedure should be repeated until the upper
layer of soil suspension is transparent (Gerdemann
and Nicolson 1963) The sieving on the fine mesh
is collected into a small beaker and dispersed with
ultra sonication Weak sonication (ie 30 W 30 sec)
101 Vol 31 No 2 2010
is enough and strong sonication may destroy fungal spores Then the dispersed sample is again passed though the sieve Depending on the toughness of soil aggregate the sonication process can be
repeated UsuaUy AM fungal spores are collected
on 100um some small spores are on 50um To collect large spores such as Gigaspora margarita 250um sieve is efficient
Morphological observation of spores for identification
Morphology of spores is a basis for identification of arbuscular mycorrhizal fungi because the hyphae and the organs such as arbuscules and vesicles are not specific to species Spores collected from the soil often deteriorate so that they may be used only for tentative identification at genus level For detailed observation culturing the target AM fungus is required and the spores from pot culture should be used At least 30-50 spores from the same morphological spores type should be observed and more observation is required
1 Observation of intact spores under dissecting
microscope Spore collected from soil or
Rhizosphere Plant soil
1 (w ith roo ts)
Pl ant trap culture Sieving
Soil trap culture ~ I
-- r
1 i-~II (- soi l
~ I Sores
Fig 5 Methods tor trapping AM tungi
culturing medium is put in a watch glass or a
small Petri dish and their shape colour and the attachment to spores are observed Spores should be classified into each spore type based
upon morphology For each spore type detailed
observation is required
For colour description standard colour chart
such as soil colour chart or colour chart of
glomalean fungi (INVAM colour chart) should be
used The colour chart should be under the same
illumination as used for spore observation because
the colour itself is greatly affected by the
characteristics of illumination It should reminded
that attachment such as soporiferous saccule for
Acaulosporaceae and subtenting hyphae for
Gigasporaceae are often lost during collection of
spores from soil
2 Observation of spores mounted on slide glass
under a compound microscope Spores are
mounted with polyvinyle lactoglycerol (PVLG)
on a slide glass Several slides should be made
Intact and crushed spores mounted with PVLG
Polyvinyle alcohol (polymerization 1000-1500)
Fig 6 Single spore isolation
Source Biofertilizers Manual by FNCA Forum fo r Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
102 AGRICtITURAL REVIEWS
166 g is dissolved in 10 ml deionized water
Complete dissolution may need 6 hours at 80 dc The dissolved polyvinyle alcohol is mixed
with 10 ml of lactic acid and 1 ml of glycerol it
can be used more than a day after preparation
The Important morphological characters of AM
fungi is indicated in Tabie 3 and Fig 4
Culturing of AM fungi AM fungi need the symbiotic association
with plants for proliferation Therefore culturing AM
fungi is to indicate AM fungi to host plant and to
grow the inoculated plant For the AM fungal
inoculum spores collected from soil can be used
However spores in soil are not always active in
colonizing plants Therefore trapping culture is often
employed Soil of sieving of soil is used as medium
(Soil Trap Culture) To isolate AM fungi colonizing
roots mycorrhizal plants collected from field can be
transplanted to potting medium as Plant Trap Culture
(Fig 5) (Murakoshi et ai 1998)
1 Host plant Various mycotrophic plants can be
used viz leguminous species (Trifolium spp Medicago spp Lotus japonicus) (ie Lolium spp Paspalum notatum) and other herbaceous
species (ie Plantago spp) Onion and leek
(Alliumspp ) and maize sorghum are also good
hosts
2 Growth condition Any conditions which support good growth of host plant plants are acceptable To avoid contamination a growth chamber is preferred If green house is used it should be kept clean It should be kept clean It should be remanded that cross-contamination or contamination from dust is inevitable under open-air conditions even in growth chamber To prevent cross-contamination from other pot culture in the same chamber use of plastic bag is advisable (Walker and Vestberg 1994)
3 Procedure A Plant Trap Culture
i Rhizosphere soil is collected with shoots of
trap plant cut at the crown and roots are
finely chopped and mixed with the soils using
a sharp chopper
ii The chopped roots and soil are mixed l1 (vv )
with autoclav ed coarse sand in a
mechanical mixer or massaged well in a jurable plastic bag
iii The soil mix is then transferred to a 15 cm plastic
pot
Iv Plants seeds of suitable trap plants such tropical signal grass into the pot
as
v The pot cultures are maintained in a green house
for at least 3 months and check sporulation
from time to time By the fourth month AMF
sporulation may be at the peak Sanitary tests may also be carried out to ensure no
contamination from parasitic fungi occurs
vi Keep fertilizer application to a minimum to
encourage AMF proliferation
vii Trap culture pots are later left to dry under shade
for up to two weeks
viiiHarvest the spores using the sieving and
decanting techniques or the denSity-gradient
centrifugation technique
ix The mono specification spores are ready for
inoculation onto seedlings of the desired crops
B Single spore isolation To purify an isolated
fungus single spore isolation is needed
Even if the spores are morphologically
identical it often contains contaminants
whose morphology is very similar For single
spore isolation no specific equipment is
needed For effic ient handling two sets of
dissecting microscope are placed side by
side One microscope is for picking up
single spore from spores in a dish Another
is for inoculation of a spore on roots S
seedling placed in the pot is placed under
another microscope Under the fist
microscope single spore is picked up and
transferred under the second microscope
Under the second microscope the spore is
placed on fine roots or root tip of the
seedlings (Fig 6) If culture is successful
103 VoL 31 0 2 2(10
the detailed morphological observation is or the leaf litter under the tree is removed About required Potting medium can be dried by 10 g per plant of VA mycorrhizal biofertilizers is stopping watering to the pot After the host applied to the root hairs system and then plant wilt the dried soil containing spores covered with soil can be stored for a year at 4-5 0 C
3 For transplanting seedling simply sprinkle VA
Inoculation of Arbuscular Mycorrhizae mycorrhizal biofeliilizers adjacent to the plant roots and cover with soil l Seed inoculation- Most of cereals legume
sorghum cotton and vegetables are inoculated 4 VA mycorrhizal biofertilizers can be used in
with seed VAM culture containing infected root combination with several types of biofertilizers (Rhizobium PSB PGPR) bits viable AM-fungal propagules (including
spores) containing 8-10 viable sporesg VAM Problems and potential for VAM inoculum
culture 2 kglha is used production and utilization
2 Soil application- The AM or VAM culture should l Situation where effective indigenous VAM be applied to the open furrows 15 kglha using population is low
field soil to bulk the carrier This method is 2 Inoculation is best for transplanted crops where suitable for fruit crops and plantation crops For soil disturbances have reduced VAM
huit trees soil under the plant canopy is trenched inoculation potential
REFERENCES Al-Karaki GN and Clark RB (1990) Plant Nutr 22 1775-1784
Auge RM (2004) Canadian J Soil Sci 84 373-381
Bryla D Rand Duniway J M (1997) Plant Sai1197 85-108
Biro B etal (2000) Applied Sail Ecol 15 159-168
Borowicz VA (2001) Ecology82 3057-3068
Clark R B and Zeto S K (2000) J Plant Nutr 23 867-902
Gange A C eta (2005) Ecolagy86 603-611
Gange A C and West H M (1994) New Phytal 128 79-87
Gerdemann Jw and Nicolson T H (1963) Trans British MvcolagicaISac 46 235-244
Harley J L and Smith S E (1983) Mycorrhizal Symbiosis Academic Press London
Hwang S E etal (1993) Plant Dis 77 1093-1098
Hodge A (2000) FEMS Microbial Eco 32 91-96
Hodge A eta (2001) Nature 413 297-299
Jallali BL and Chand H (1987) in Proceedings of iSI Asian conference on Mycorrhizae at Madras (Mahadevan et
al Eds)p 209-214
Johansson J eta (2004) FEMS Microbial Eca 48 1-13
Karagiannidis N eta (2002) Sci Hart 94 145-156
Kasiamdari R S et al (2002) Plant and Soil 238 235-244
KjolIer R and Rosendahl S (1996) Mycorrhizae6 487-491
Koide R T eta (2000) NewPhytologyl48 163-168
Matsubara Y et al (2002) J Japan Soc Hod Sci 71 370-374
Morton J B and Benny G L (1990) Mycatoxan 37 471-491
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240
98 AGRICUTURAL REVIEWS
Classification of mycorrhizae shyClassification of mycorrhizal fungi according to Morton and Benny (1990) is given as follows
1 Order
2 Sub order
3 Family
4 Genus
connected to an external mycelium in the
rhizosphere and soil It also shows the presence of
structures at different stages in development with a
shrub like appearance called arbuscles (arbuscula
Latin=shrub) These structures are similar to
haustoria but are produced by dichotomous
branching of hyphae These structures serve to
transfer mineral nutrients from the fungi to host plants
and sugars from the plant to the fungus The second
type of structure the Vesicle (Vesicula Latin=small
bladder) may be formed by swelling of the hyphae
and may occur within or between cells and serve as
storage organs for mycorrhizae The AM fungi are
the most common and widespread group Nearby
100 identified species of fungi from these
endomycorrhizal associations in soils from the tropics to the arctic (Table 2)
The members of Glominae suborder forming
intraradical vesicles and branched haustoria called
Entrophosphora
arbuscles in mycorrhizal roots spores born
terminally intercalarily and laterally form one or
more subtending hyphal is known as vesicular
arbuscular mycorrhizae (VAM) while as members
of Gigasporinae sub order do not form vesicles and
hence are arbuscular mycorrhizal fungi (AM)
Mechanisms of nutrients and water uptake-The association between the host and fungus
is well co-ordinated Young feeding do not roots
show any sign of damage when infected Indeed
the living root is essential for the culture of these
fungi The host plant supplying the fungus with
organic compounds and the fungus assisting the
roots in exploiting the soil for water and inorganic
nutrients The relationship is of particular
importance for phosphorus nutrition since
phosphate depletion zones can readily occur around
plant roots The network of hyphae extending from
the roots into the soil enlarges the contact area
- --- -~
VeSicle extraradicat
spore hyphae
- (- ) --2- - Jmij] ----- g-WCmiddotm-middot-middot-shy - null_~_ ~ v~=--------
soil root
Fig3 Schematic picture of AM fungi colonizing root and their hyphaI extension into soil
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACAl March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
between the bulk soil and the fungus-host root
association around depletion zone of soil thus create
a potential gradient against high concentration zone
from bulk of soil to the less concentrated depleted
zone by diffusion and hence facilitates a greater
uptake of phosphate It also indicates the possibility
that rate of phosphate uptake by the hyphae may
be higher than that by the root Phosphate translocation in the hyphae appears to be rapid
The phosphate is translocated in the form of small polyphosphate granules in the hyphae thus
maintaining low internal phosphate (Pi)
concentration by cytoplasmic streaming (Sorensen
et aJ 2005) Phosphate taken up by the fungus is
from the labile pool of soil phosphate and hence
from a readily available phosphate fraction
Mycorrhizal fungi may take up phosphate from less soluble phosphate which may be of particular
importance in acid tropical soils It has become
increasingly apparent that arbuscular mycorrhizae
fungi can be important in the uptake of other
nutrients by the host plant Zn Cu Fe N K Ca and Mg nutrition is most commonly reported as being
influenced by the mycorrhizal associations (Clark
and Zeto 2000)
Observation of arbuscular mycorrhizal fungi in roots
The structure of arbuscular mycorrhizal
fungus in roots is usually not observed without
appropriate staining Freshly collected root samples
should be washed gently and be free from soil
particles Roots are treated with 10 KOH solution for 30 minute to 1-2 hour in a hot bath depending on thickness of root structure Treated roots are
washed with water and treated with 2 HCI
solution Acidified root samples are stained with
0 05 trypan blue (or acid fuchsin) in lactic acid
for 10-15 minutes in a hot bath or for a few hours without heating (Phillip and Hayman 1970) The
roots are destained with lactic acid or lacto-glycerol
and are now ready for microscopic with transmitted
observation The stained roots may be observed first
under a dissecting microscope with transmitted
illumination and then observed under a compound microscope Fungal structures are stained and can
be easily recognized
100 AGRICUTURALREVIEWS
Table 3 Morphological character of AM or VAM fungal spores
Morphology Characteristics
Shape ( ie globular spher cal Irregular) Size Globular diameter (minimum-average-maximum) Irregular shape length x width (minimumshy
average-maximum) Hyphal attachment (ie sporiferous saccule bulbous suspensor etc) sporiferous saccule= Acaulospora
Entrophosphora bulbous suspensor = Gigaspora Scutellospora Auxiliary cell (presence = Gigaspora Scutellospora none ) Sporocarp (presence none) Germination shield (presence = Scutellospora absent) Surface ornamentation (ie smooth rough reticulate etc) Vesicle (Presence or absence in mycorrhizal roQts)
These characters should be recorded with careful observation of many spores
Glomus [Jiversispora Paraglomus
Acaulospora
Enlrophospora
-~~~
Gigaspora ( )gtgt
- ~ ~lbOUS suspensor
Sculeflospora
~gerrnination shield
fig 4 Morphology of representative genera of arbuscular mycorrhizal fungi
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
Isolation of spores from soils and their observation for identification
Spores of AM fu ngi in soil can be collected by the wet sieving and decanting method The gravity of spores is little than that of soil particles Successive decantation of soil suspension followed by sieving and with fine mesh can concentrate the spores from soil Since the spores are globular or sub-globular in 50-500 pm in diameter they in sievings can be recognized under a dissecting microscope
Equipments 1 Sieve Sieves with various mesh sizes At least
the following mesh sizes are required 1 mm 100
pm and 50 pm other size such as 500 pm and
250pm are preferable Stainless steel sieves are
commercially available However it is possible to make a plastic sieve with PVP tubes and
nylone mesh by yourself
2 Fine glass pipettes Tip of disposal glass Pasteur
pipette (1 ml) is softened with flame of a gas
burner and is sharpened Various sizes of tips
fitting to sizes of spores can be prepared
3 Forceps light fine tweezers is preferable
4 Dissecting microscope Stereoscopic zoom
microscope with bifurcated illuminator of fiber
arm is advisable Transmitted il lumination system is also needed
5 Compound microscope Biological compound
microscope is needed
Procedure 50 g of freshly collected soil sample is put
into 1 to 2 litres of plastic beakers Usually
rhizosphere soils are rich in arbuscular mycorrhizal
fungal spores Beaker size can be changed
depending on the soil sample size Soil is suspended
with about 500 ml to 1 litre of tap water Soil macroshy
aggregates should be crushed with hand after 10shy
30 seconds of setting down of soil particles the upper
layer of soil suspension is poured into the sieving
The procedure should be repeated until the upper
layer of soil suspension is transparent (Gerdemann
and Nicolson 1963) The sieving on the fine mesh
is collected into a small beaker and dispersed with
ultra sonication Weak sonication (ie 30 W 30 sec)
101 Vol 31 No 2 2010
is enough and strong sonication may destroy fungal spores Then the dispersed sample is again passed though the sieve Depending on the toughness of soil aggregate the sonication process can be
repeated UsuaUy AM fungal spores are collected
on 100um some small spores are on 50um To collect large spores such as Gigaspora margarita 250um sieve is efficient
Morphological observation of spores for identification
Morphology of spores is a basis for identification of arbuscular mycorrhizal fungi because the hyphae and the organs such as arbuscules and vesicles are not specific to species Spores collected from the soil often deteriorate so that they may be used only for tentative identification at genus level For detailed observation culturing the target AM fungus is required and the spores from pot culture should be used At least 30-50 spores from the same morphological spores type should be observed and more observation is required
1 Observation of intact spores under dissecting
microscope Spore collected from soil or
Rhizosphere Plant soil
1 (w ith roo ts)
Pl ant trap culture Sieving
Soil trap culture ~ I
-- r
1 i-~II (- soi l
~ I Sores
Fig 5 Methods tor trapping AM tungi
culturing medium is put in a watch glass or a
small Petri dish and their shape colour and the attachment to spores are observed Spores should be classified into each spore type based
upon morphology For each spore type detailed
observation is required
For colour description standard colour chart
such as soil colour chart or colour chart of
glomalean fungi (INVAM colour chart) should be
used The colour chart should be under the same
illumination as used for spore observation because
the colour itself is greatly affected by the
characteristics of illumination It should reminded
that attachment such as soporiferous saccule for
Acaulosporaceae and subtenting hyphae for
Gigasporaceae are often lost during collection of
spores from soil
2 Observation of spores mounted on slide glass
under a compound microscope Spores are
mounted with polyvinyle lactoglycerol (PVLG)
on a slide glass Several slides should be made
Intact and crushed spores mounted with PVLG
Polyvinyle alcohol (polymerization 1000-1500)
Fig 6 Single spore isolation
Source Biofertilizers Manual by FNCA Forum fo r Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
102 AGRICtITURAL REVIEWS
166 g is dissolved in 10 ml deionized water
Complete dissolution may need 6 hours at 80 dc The dissolved polyvinyle alcohol is mixed
with 10 ml of lactic acid and 1 ml of glycerol it
can be used more than a day after preparation
The Important morphological characters of AM
fungi is indicated in Tabie 3 and Fig 4
Culturing of AM fungi AM fungi need the symbiotic association
with plants for proliferation Therefore culturing AM
fungi is to indicate AM fungi to host plant and to
grow the inoculated plant For the AM fungal
inoculum spores collected from soil can be used
However spores in soil are not always active in
colonizing plants Therefore trapping culture is often
employed Soil of sieving of soil is used as medium
(Soil Trap Culture) To isolate AM fungi colonizing
roots mycorrhizal plants collected from field can be
transplanted to potting medium as Plant Trap Culture
(Fig 5) (Murakoshi et ai 1998)
1 Host plant Various mycotrophic plants can be
used viz leguminous species (Trifolium spp Medicago spp Lotus japonicus) (ie Lolium spp Paspalum notatum) and other herbaceous
species (ie Plantago spp) Onion and leek
(Alliumspp ) and maize sorghum are also good
hosts
2 Growth condition Any conditions which support good growth of host plant plants are acceptable To avoid contamination a growth chamber is preferred If green house is used it should be kept clean It should be kept clean It should be remanded that cross-contamination or contamination from dust is inevitable under open-air conditions even in growth chamber To prevent cross-contamination from other pot culture in the same chamber use of plastic bag is advisable (Walker and Vestberg 1994)
3 Procedure A Plant Trap Culture
i Rhizosphere soil is collected with shoots of
trap plant cut at the crown and roots are
finely chopped and mixed with the soils using
a sharp chopper
ii The chopped roots and soil are mixed l1 (vv )
with autoclav ed coarse sand in a
mechanical mixer or massaged well in a jurable plastic bag
iii The soil mix is then transferred to a 15 cm plastic
pot
Iv Plants seeds of suitable trap plants such tropical signal grass into the pot
as
v The pot cultures are maintained in a green house
for at least 3 months and check sporulation
from time to time By the fourth month AMF
sporulation may be at the peak Sanitary tests may also be carried out to ensure no
contamination from parasitic fungi occurs
vi Keep fertilizer application to a minimum to
encourage AMF proliferation
vii Trap culture pots are later left to dry under shade
for up to two weeks
viiiHarvest the spores using the sieving and
decanting techniques or the denSity-gradient
centrifugation technique
ix The mono specification spores are ready for
inoculation onto seedlings of the desired crops
B Single spore isolation To purify an isolated
fungus single spore isolation is needed
Even if the spores are morphologically
identical it often contains contaminants
whose morphology is very similar For single
spore isolation no specific equipment is
needed For effic ient handling two sets of
dissecting microscope are placed side by
side One microscope is for picking up
single spore from spores in a dish Another
is for inoculation of a spore on roots S
seedling placed in the pot is placed under
another microscope Under the fist
microscope single spore is picked up and
transferred under the second microscope
Under the second microscope the spore is
placed on fine roots or root tip of the
seedlings (Fig 6) If culture is successful
103 VoL 31 0 2 2(10
the detailed morphological observation is or the leaf litter under the tree is removed About required Potting medium can be dried by 10 g per plant of VA mycorrhizal biofertilizers is stopping watering to the pot After the host applied to the root hairs system and then plant wilt the dried soil containing spores covered with soil can be stored for a year at 4-5 0 C
3 For transplanting seedling simply sprinkle VA
Inoculation of Arbuscular Mycorrhizae mycorrhizal biofeliilizers adjacent to the plant roots and cover with soil l Seed inoculation- Most of cereals legume
sorghum cotton and vegetables are inoculated 4 VA mycorrhizal biofertilizers can be used in
with seed VAM culture containing infected root combination with several types of biofertilizers (Rhizobium PSB PGPR) bits viable AM-fungal propagules (including
spores) containing 8-10 viable sporesg VAM Problems and potential for VAM inoculum
culture 2 kglha is used production and utilization
2 Soil application- The AM or VAM culture should l Situation where effective indigenous VAM be applied to the open furrows 15 kglha using population is low
field soil to bulk the carrier This method is 2 Inoculation is best for transplanted crops where suitable for fruit crops and plantation crops For soil disturbances have reduced VAM
huit trees soil under the plant canopy is trenched inoculation potential
REFERENCES Al-Karaki GN and Clark RB (1990) Plant Nutr 22 1775-1784
Auge RM (2004) Canadian J Soil Sci 84 373-381
Bryla D Rand Duniway J M (1997) Plant Sai1197 85-108
Biro B etal (2000) Applied Sail Ecol 15 159-168
Borowicz VA (2001) Ecology82 3057-3068
Clark R B and Zeto S K (2000) J Plant Nutr 23 867-902
Gange A C eta (2005) Ecolagy86 603-611
Gange A C and West H M (1994) New Phytal 128 79-87
Gerdemann Jw and Nicolson T H (1963) Trans British MvcolagicaISac 46 235-244
Harley J L and Smith S E (1983) Mycorrhizal Symbiosis Academic Press London
Hwang S E etal (1993) Plant Dis 77 1093-1098
Hodge A (2000) FEMS Microbial Eco 32 91-96
Hodge A eta (2001) Nature 413 297-299
Jallali BL and Chand H (1987) in Proceedings of iSI Asian conference on Mycorrhizae at Madras (Mahadevan et
al Eds)p 209-214
Johansson J eta (2004) FEMS Microbial Eca 48 1-13
Karagiannidis N eta (2002) Sci Hart 94 145-156
Kasiamdari R S et al (2002) Plant and Soil 238 235-244
KjolIer R and Rosendahl S (1996) Mycorrhizae6 487-491
Koide R T eta (2000) NewPhytologyl48 163-168
Matsubara Y et al (2002) J Japan Soc Hod Sci 71 370-374
Morton J B and Benny G L (1990) Mycatoxan 37 471-491
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240
- --- -~
VeSicle extraradicat
spore hyphae
- (- ) --2- - Jmij] ----- g-WCmiddotm-middot-middot-shy - null_~_ ~ v~=--------
soil root
Fig3 Schematic picture of AM fungi colonizing root and their hyphaI extension into soil
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACAl March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
between the bulk soil and the fungus-host root
association around depletion zone of soil thus create
a potential gradient against high concentration zone
from bulk of soil to the less concentrated depleted
zone by diffusion and hence facilitates a greater
uptake of phosphate It also indicates the possibility
that rate of phosphate uptake by the hyphae may
be higher than that by the root Phosphate translocation in the hyphae appears to be rapid
The phosphate is translocated in the form of small polyphosphate granules in the hyphae thus
maintaining low internal phosphate (Pi)
concentration by cytoplasmic streaming (Sorensen
et aJ 2005) Phosphate taken up by the fungus is
from the labile pool of soil phosphate and hence
from a readily available phosphate fraction
Mycorrhizal fungi may take up phosphate from less soluble phosphate which may be of particular
importance in acid tropical soils It has become
increasingly apparent that arbuscular mycorrhizae
fungi can be important in the uptake of other
nutrients by the host plant Zn Cu Fe N K Ca and Mg nutrition is most commonly reported as being
influenced by the mycorrhizal associations (Clark
and Zeto 2000)
Observation of arbuscular mycorrhizal fungi in roots
The structure of arbuscular mycorrhizal
fungus in roots is usually not observed without
appropriate staining Freshly collected root samples
should be washed gently and be free from soil
particles Roots are treated with 10 KOH solution for 30 minute to 1-2 hour in a hot bath depending on thickness of root structure Treated roots are
washed with water and treated with 2 HCI
solution Acidified root samples are stained with
0 05 trypan blue (or acid fuchsin) in lactic acid
for 10-15 minutes in a hot bath or for a few hours without heating (Phillip and Hayman 1970) The
roots are destained with lactic acid or lacto-glycerol
and are now ready for microscopic with transmitted
observation The stained roots may be observed first
under a dissecting microscope with transmitted
illumination and then observed under a compound microscope Fungal structures are stained and can
be easily recognized
100 AGRICUTURALREVIEWS
Table 3 Morphological character of AM or VAM fungal spores
Morphology Characteristics
Shape ( ie globular spher cal Irregular) Size Globular diameter (minimum-average-maximum) Irregular shape length x width (minimumshy
average-maximum) Hyphal attachment (ie sporiferous saccule bulbous suspensor etc) sporiferous saccule= Acaulospora
Entrophosphora bulbous suspensor = Gigaspora Scutellospora Auxiliary cell (presence = Gigaspora Scutellospora none ) Sporocarp (presence none) Germination shield (presence = Scutellospora absent) Surface ornamentation (ie smooth rough reticulate etc) Vesicle (Presence or absence in mycorrhizal roQts)
These characters should be recorded with careful observation of many spores
Glomus [Jiversispora Paraglomus
Acaulospora
Enlrophospora
-~~~
Gigaspora ( )gtgt
- ~ ~lbOUS suspensor
Sculeflospora
~gerrnination shield
fig 4 Morphology of representative genera of arbuscular mycorrhizal fungi
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
Isolation of spores from soils and their observation for identification
Spores of AM fu ngi in soil can be collected by the wet sieving and decanting method The gravity of spores is little than that of soil particles Successive decantation of soil suspension followed by sieving and with fine mesh can concentrate the spores from soil Since the spores are globular or sub-globular in 50-500 pm in diameter they in sievings can be recognized under a dissecting microscope
Equipments 1 Sieve Sieves with various mesh sizes At least
the following mesh sizes are required 1 mm 100
pm and 50 pm other size such as 500 pm and
250pm are preferable Stainless steel sieves are
commercially available However it is possible to make a plastic sieve with PVP tubes and
nylone mesh by yourself
2 Fine glass pipettes Tip of disposal glass Pasteur
pipette (1 ml) is softened with flame of a gas
burner and is sharpened Various sizes of tips
fitting to sizes of spores can be prepared
3 Forceps light fine tweezers is preferable
4 Dissecting microscope Stereoscopic zoom
microscope with bifurcated illuminator of fiber
arm is advisable Transmitted il lumination system is also needed
5 Compound microscope Biological compound
microscope is needed
Procedure 50 g of freshly collected soil sample is put
into 1 to 2 litres of plastic beakers Usually
rhizosphere soils are rich in arbuscular mycorrhizal
fungal spores Beaker size can be changed
depending on the soil sample size Soil is suspended
with about 500 ml to 1 litre of tap water Soil macroshy
aggregates should be crushed with hand after 10shy
30 seconds of setting down of soil particles the upper
layer of soil suspension is poured into the sieving
The procedure should be repeated until the upper
layer of soil suspension is transparent (Gerdemann
and Nicolson 1963) The sieving on the fine mesh
is collected into a small beaker and dispersed with
ultra sonication Weak sonication (ie 30 W 30 sec)
101 Vol 31 No 2 2010
is enough and strong sonication may destroy fungal spores Then the dispersed sample is again passed though the sieve Depending on the toughness of soil aggregate the sonication process can be
repeated UsuaUy AM fungal spores are collected
on 100um some small spores are on 50um To collect large spores such as Gigaspora margarita 250um sieve is efficient
Morphological observation of spores for identification
Morphology of spores is a basis for identification of arbuscular mycorrhizal fungi because the hyphae and the organs such as arbuscules and vesicles are not specific to species Spores collected from the soil often deteriorate so that they may be used only for tentative identification at genus level For detailed observation culturing the target AM fungus is required and the spores from pot culture should be used At least 30-50 spores from the same morphological spores type should be observed and more observation is required
1 Observation of intact spores under dissecting
microscope Spore collected from soil or
Rhizosphere Plant soil
1 (w ith roo ts)
Pl ant trap culture Sieving
Soil trap culture ~ I
-- r
1 i-~II (- soi l
~ I Sores
Fig 5 Methods tor trapping AM tungi
culturing medium is put in a watch glass or a
small Petri dish and their shape colour and the attachment to spores are observed Spores should be classified into each spore type based
upon morphology For each spore type detailed
observation is required
For colour description standard colour chart
such as soil colour chart or colour chart of
glomalean fungi (INVAM colour chart) should be
used The colour chart should be under the same
illumination as used for spore observation because
the colour itself is greatly affected by the
characteristics of illumination It should reminded
that attachment such as soporiferous saccule for
Acaulosporaceae and subtenting hyphae for
Gigasporaceae are often lost during collection of
spores from soil
2 Observation of spores mounted on slide glass
under a compound microscope Spores are
mounted with polyvinyle lactoglycerol (PVLG)
on a slide glass Several slides should be made
Intact and crushed spores mounted with PVLG
Polyvinyle alcohol (polymerization 1000-1500)
Fig 6 Single spore isolation
Source Biofertilizers Manual by FNCA Forum fo r Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
102 AGRICtITURAL REVIEWS
166 g is dissolved in 10 ml deionized water
Complete dissolution may need 6 hours at 80 dc The dissolved polyvinyle alcohol is mixed
with 10 ml of lactic acid and 1 ml of glycerol it
can be used more than a day after preparation
The Important morphological characters of AM
fungi is indicated in Tabie 3 and Fig 4
Culturing of AM fungi AM fungi need the symbiotic association
with plants for proliferation Therefore culturing AM
fungi is to indicate AM fungi to host plant and to
grow the inoculated plant For the AM fungal
inoculum spores collected from soil can be used
However spores in soil are not always active in
colonizing plants Therefore trapping culture is often
employed Soil of sieving of soil is used as medium
(Soil Trap Culture) To isolate AM fungi colonizing
roots mycorrhizal plants collected from field can be
transplanted to potting medium as Plant Trap Culture
(Fig 5) (Murakoshi et ai 1998)
1 Host plant Various mycotrophic plants can be
used viz leguminous species (Trifolium spp Medicago spp Lotus japonicus) (ie Lolium spp Paspalum notatum) and other herbaceous
species (ie Plantago spp) Onion and leek
(Alliumspp ) and maize sorghum are also good
hosts
2 Growth condition Any conditions which support good growth of host plant plants are acceptable To avoid contamination a growth chamber is preferred If green house is used it should be kept clean It should be kept clean It should be remanded that cross-contamination or contamination from dust is inevitable under open-air conditions even in growth chamber To prevent cross-contamination from other pot culture in the same chamber use of plastic bag is advisable (Walker and Vestberg 1994)
3 Procedure A Plant Trap Culture
i Rhizosphere soil is collected with shoots of
trap plant cut at the crown and roots are
finely chopped and mixed with the soils using
a sharp chopper
ii The chopped roots and soil are mixed l1 (vv )
with autoclav ed coarse sand in a
mechanical mixer or massaged well in a jurable plastic bag
iii The soil mix is then transferred to a 15 cm plastic
pot
Iv Plants seeds of suitable trap plants such tropical signal grass into the pot
as
v The pot cultures are maintained in a green house
for at least 3 months and check sporulation
from time to time By the fourth month AMF
sporulation may be at the peak Sanitary tests may also be carried out to ensure no
contamination from parasitic fungi occurs
vi Keep fertilizer application to a minimum to
encourage AMF proliferation
vii Trap culture pots are later left to dry under shade
for up to two weeks
viiiHarvest the spores using the sieving and
decanting techniques or the denSity-gradient
centrifugation technique
ix The mono specification spores are ready for
inoculation onto seedlings of the desired crops
B Single spore isolation To purify an isolated
fungus single spore isolation is needed
Even if the spores are morphologically
identical it often contains contaminants
whose morphology is very similar For single
spore isolation no specific equipment is
needed For effic ient handling two sets of
dissecting microscope are placed side by
side One microscope is for picking up
single spore from spores in a dish Another
is for inoculation of a spore on roots S
seedling placed in the pot is placed under
another microscope Under the fist
microscope single spore is picked up and
transferred under the second microscope
Under the second microscope the spore is
placed on fine roots or root tip of the
seedlings (Fig 6) If culture is successful
103 VoL 31 0 2 2(10
the detailed morphological observation is or the leaf litter under the tree is removed About required Potting medium can be dried by 10 g per plant of VA mycorrhizal biofertilizers is stopping watering to the pot After the host applied to the root hairs system and then plant wilt the dried soil containing spores covered with soil can be stored for a year at 4-5 0 C
3 For transplanting seedling simply sprinkle VA
Inoculation of Arbuscular Mycorrhizae mycorrhizal biofeliilizers adjacent to the plant roots and cover with soil l Seed inoculation- Most of cereals legume
sorghum cotton and vegetables are inoculated 4 VA mycorrhizal biofertilizers can be used in
with seed VAM culture containing infected root combination with several types of biofertilizers (Rhizobium PSB PGPR) bits viable AM-fungal propagules (including
spores) containing 8-10 viable sporesg VAM Problems and potential for VAM inoculum
culture 2 kglha is used production and utilization
2 Soil application- The AM or VAM culture should l Situation where effective indigenous VAM be applied to the open furrows 15 kglha using population is low
field soil to bulk the carrier This method is 2 Inoculation is best for transplanted crops where suitable for fruit crops and plantation crops For soil disturbances have reduced VAM
huit trees soil under the plant canopy is trenched inoculation potential
REFERENCES Al-Karaki GN and Clark RB (1990) Plant Nutr 22 1775-1784
Auge RM (2004) Canadian J Soil Sci 84 373-381
Bryla D Rand Duniway J M (1997) Plant Sai1197 85-108
Biro B etal (2000) Applied Sail Ecol 15 159-168
Borowicz VA (2001) Ecology82 3057-3068
Clark R B and Zeto S K (2000) J Plant Nutr 23 867-902
Gange A C eta (2005) Ecolagy86 603-611
Gange A C and West H M (1994) New Phytal 128 79-87
Gerdemann Jw and Nicolson T H (1963) Trans British MvcolagicaISac 46 235-244
Harley J L and Smith S E (1983) Mycorrhizal Symbiosis Academic Press London
Hwang S E etal (1993) Plant Dis 77 1093-1098
Hodge A (2000) FEMS Microbial Eco 32 91-96
Hodge A eta (2001) Nature 413 297-299
Jallali BL and Chand H (1987) in Proceedings of iSI Asian conference on Mycorrhizae at Madras (Mahadevan et
al Eds)p 209-214
Johansson J eta (2004) FEMS Microbial Eca 48 1-13
Karagiannidis N eta (2002) Sci Hart 94 145-156
Kasiamdari R S et al (2002) Plant and Soil 238 235-244
KjolIer R and Rosendahl S (1996) Mycorrhizae6 487-491
Koide R T eta (2000) NewPhytologyl48 163-168
Matsubara Y et al (2002) J Japan Soc Hod Sci 71 370-374
Morton J B and Benny G L (1990) Mycatoxan 37 471-491
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240
100 AGRICUTURALREVIEWS
Table 3 Morphological character of AM or VAM fungal spores
Morphology Characteristics
Shape ( ie globular spher cal Irregular) Size Globular diameter (minimum-average-maximum) Irregular shape length x width (minimumshy
average-maximum) Hyphal attachment (ie sporiferous saccule bulbous suspensor etc) sporiferous saccule= Acaulospora
Entrophosphora bulbous suspensor = Gigaspora Scutellospora Auxiliary cell (presence = Gigaspora Scutellospora none ) Sporocarp (presence none) Germination shield (presence = Scutellospora absent) Surface ornamentation (ie smooth rough reticulate etc) Vesicle (Presence or absence in mycorrhizal roQts)
These characters should be recorded with careful observation of many spores
Glomus [Jiversispora Paraglomus
Acaulospora
Enlrophospora
-~~~
Gigaspora ( )gtgt
- ~ ~lbOUS suspensor
Sculeflospora
~gerrnination shield
fig 4 Morphology of representative genera of arbuscular mycorrhizal fungi
Source Biofertilizers Manual by FNCA Forum for Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
Isolation of spores from soils and their observation for identification
Spores of AM fu ngi in soil can be collected by the wet sieving and decanting method The gravity of spores is little than that of soil particles Successive decantation of soil suspension followed by sieving and with fine mesh can concentrate the spores from soil Since the spores are globular or sub-globular in 50-500 pm in diameter they in sievings can be recognized under a dissecting microscope
Equipments 1 Sieve Sieves with various mesh sizes At least
the following mesh sizes are required 1 mm 100
pm and 50 pm other size such as 500 pm and
250pm are preferable Stainless steel sieves are
commercially available However it is possible to make a plastic sieve with PVP tubes and
nylone mesh by yourself
2 Fine glass pipettes Tip of disposal glass Pasteur
pipette (1 ml) is softened with flame of a gas
burner and is sharpened Various sizes of tips
fitting to sizes of spores can be prepared
3 Forceps light fine tweezers is preferable
4 Dissecting microscope Stereoscopic zoom
microscope with bifurcated illuminator of fiber
arm is advisable Transmitted il lumination system is also needed
5 Compound microscope Biological compound
microscope is needed
Procedure 50 g of freshly collected soil sample is put
into 1 to 2 litres of plastic beakers Usually
rhizosphere soils are rich in arbuscular mycorrhizal
fungal spores Beaker size can be changed
depending on the soil sample size Soil is suspended
with about 500 ml to 1 litre of tap water Soil macroshy
aggregates should be crushed with hand after 10shy
30 seconds of setting down of soil particles the upper
layer of soil suspension is poured into the sieving
The procedure should be repeated until the upper
layer of soil suspension is transparent (Gerdemann
and Nicolson 1963) The sieving on the fine mesh
is collected into a small beaker and dispersed with
ultra sonication Weak sonication (ie 30 W 30 sec)
101 Vol 31 No 2 2010
is enough and strong sonication may destroy fungal spores Then the dispersed sample is again passed though the sieve Depending on the toughness of soil aggregate the sonication process can be
repeated UsuaUy AM fungal spores are collected
on 100um some small spores are on 50um To collect large spores such as Gigaspora margarita 250um sieve is efficient
Morphological observation of spores for identification
Morphology of spores is a basis for identification of arbuscular mycorrhizal fungi because the hyphae and the organs such as arbuscules and vesicles are not specific to species Spores collected from the soil often deteriorate so that they may be used only for tentative identification at genus level For detailed observation culturing the target AM fungus is required and the spores from pot culture should be used At least 30-50 spores from the same morphological spores type should be observed and more observation is required
1 Observation of intact spores under dissecting
microscope Spore collected from soil or
Rhizosphere Plant soil
1 (w ith roo ts)
Pl ant trap culture Sieving
Soil trap culture ~ I
-- r
1 i-~II (- soi l
~ I Sores
Fig 5 Methods tor trapping AM tungi
culturing medium is put in a watch glass or a
small Petri dish and their shape colour and the attachment to spores are observed Spores should be classified into each spore type based
upon morphology For each spore type detailed
observation is required
For colour description standard colour chart
such as soil colour chart or colour chart of
glomalean fungi (INVAM colour chart) should be
used The colour chart should be under the same
illumination as used for spore observation because
the colour itself is greatly affected by the
characteristics of illumination It should reminded
that attachment such as soporiferous saccule for
Acaulosporaceae and subtenting hyphae for
Gigasporaceae are often lost during collection of
spores from soil
2 Observation of spores mounted on slide glass
under a compound microscope Spores are
mounted with polyvinyle lactoglycerol (PVLG)
on a slide glass Several slides should be made
Intact and crushed spores mounted with PVLG
Polyvinyle alcohol (polymerization 1000-1500)
Fig 6 Single spore isolation
Source Biofertilizers Manual by FNCA Forum fo r Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
102 AGRICtITURAL REVIEWS
166 g is dissolved in 10 ml deionized water
Complete dissolution may need 6 hours at 80 dc The dissolved polyvinyle alcohol is mixed
with 10 ml of lactic acid and 1 ml of glycerol it
can be used more than a day after preparation
The Important morphological characters of AM
fungi is indicated in Tabie 3 and Fig 4
Culturing of AM fungi AM fungi need the symbiotic association
with plants for proliferation Therefore culturing AM
fungi is to indicate AM fungi to host plant and to
grow the inoculated plant For the AM fungal
inoculum spores collected from soil can be used
However spores in soil are not always active in
colonizing plants Therefore trapping culture is often
employed Soil of sieving of soil is used as medium
(Soil Trap Culture) To isolate AM fungi colonizing
roots mycorrhizal plants collected from field can be
transplanted to potting medium as Plant Trap Culture
(Fig 5) (Murakoshi et ai 1998)
1 Host plant Various mycotrophic plants can be
used viz leguminous species (Trifolium spp Medicago spp Lotus japonicus) (ie Lolium spp Paspalum notatum) and other herbaceous
species (ie Plantago spp) Onion and leek
(Alliumspp ) and maize sorghum are also good
hosts
2 Growth condition Any conditions which support good growth of host plant plants are acceptable To avoid contamination a growth chamber is preferred If green house is used it should be kept clean It should be kept clean It should be remanded that cross-contamination or contamination from dust is inevitable under open-air conditions even in growth chamber To prevent cross-contamination from other pot culture in the same chamber use of plastic bag is advisable (Walker and Vestberg 1994)
3 Procedure A Plant Trap Culture
i Rhizosphere soil is collected with shoots of
trap plant cut at the crown and roots are
finely chopped and mixed with the soils using
a sharp chopper
ii The chopped roots and soil are mixed l1 (vv )
with autoclav ed coarse sand in a
mechanical mixer or massaged well in a jurable plastic bag
iii The soil mix is then transferred to a 15 cm plastic
pot
Iv Plants seeds of suitable trap plants such tropical signal grass into the pot
as
v The pot cultures are maintained in a green house
for at least 3 months and check sporulation
from time to time By the fourth month AMF
sporulation may be at the peak Sanitary tests may also be carried out to ensure no
contamination from parasitic fungi occurs
vi Keep fertilizer application to a minimum to
encourage AMF proliferation
vii Trap culture pots are later left to dry under shade
for up to two weeks
viiiHarvest the spores using the sieving and
decanting techniques or the denSity-gradient
centrifugation technique
ix The mono specification spores are ready for
inoculation onto seedlings of the desired crops
B Single spore isolation To purify an isolated
fungus single spore isolation is needed
Even if the spores are morphologically
identical it often contains contaminants
whose morphology is very similar For single
spore isolation no specific equipment is
needed For effic ient handling two sets of
dissecting microscope are placed side by
side One microscope is for picking up
single spore from spores in a dish Another
is for inoculation of a spore on roots S
seedling placed in the pot is placed under
another microscope Under the fist
microscope single spore is picked up and
transferred under the second microscope
Under the second microscope the spore is
placed on fine roots or root tip of the
seedlings (Fig 6) If culture is successful
103 VoL 31 0 2 2(10
the detailed morphological observation is or the leaf litter under the tree is removed About required Potting medium can be dried by 10 g per plant of VA mycorrhizal biofertilizers is stopping watering to the pot After the host applied to the root hairs system and then plant wilt the dried soil containing spores covered with soil can be stored for a year at 4-5 0 C
3 For transplanting seedling simply sprinkle VA
Inoculation of Arbuscular Mycorrhizae mycorrhizal biofeliilizers adjacent to the plant roots and cover with soil l Seed inoculation- Most of cereals legume
sorghum cotton and vegetables are inoculated 4 VA mycorrhizal biofertilizers can be used in
with seed VAM culture containing infected root combination with several types of biofertilizers (Rhizobium PSB PGPR) bits viable AM-fungal propagules (including
spores) containing 8-10 viable sporesg VAM Problems and potential for VAM inoculum
culture 2 kglha is used production and utilization
2 Soil application- The AM or VAM culture should l Situation where effective indigenous VAM be applied to the open furrows 15 kglha using population is low
field soil to bulk the carrier This method is 2 Inoculation is best for transplanted crops where suitable for fruit crops and plantation crops For soil disturbances have reduced VAM
huit trees soil under the plant canopy is trenched inoculation potential
REFERENCES Al-Karaki GN and Clark RB (1990) Plant Nutr 22 1775-1784
Auge RM (2004) Canadian J Soil Sci 84 373-381
Bryla D Rand Duniway J M (1997) Plant Sai1197 85-108
Biro B etal (2000) Applied Sail Ecol 15 159-168
Borowicz VA (2001) Ecology82 3057-3068
Clark R B and Zeto S K (2000) J Plant Nutr 23 867-902
Gange A C eta (2005) Ecolagy86 603-611
Gange A C and West H M (1994) New Phytal 128 79-87
Gerdemann Jw and Nicolson T H (1963) Trans British MvcolagicaISac 46 235-244
Harley J L and Smith S E (1983) Mycorrhizal Symbiosis Academic Press London
Hwang S E etal (1993) Plant Dis 77 1093-1098
Hodge A (2000) FEMS Microbial Eco 32 91-96
Hodge A eta (2001) Nature 413 297-299
Jallali BL and Chand H (1987) in Proceedings of iSI Asian conference on Mycorrhizae at Madras (Mahadevan et
al Eds)p 209-214
Johansson J eta (2004) FEMS Microbial Eca 48 1-13
Karagiannidis N eta (2002) Sci Hart 94 145-156
Kasiamdari R S et al (2002) Plant and Soil 238 235-244
KjolIer R and Rosendahl S (1996) Mycorrhizae6 487-491
Koide R T eta (2000) NewPhytologyl48 163-168
Matsubara Y et al (2002) J Japan Soc Hod Sci 71 370-374
Morton J B and Benny G L (1990) Mycatoxan 37 471-491
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240
101 Vol 31 No 2 2010
is enough and strong sonication may destroy fungal spores Then the dispersed sample is again passed though the sieve Depending on the toughness of soil aggregate the sonication process can be
repeated UsuaUy AM fungal spores are collected
on 100um some small spores are on 50um To collect large spores such as Gigaspora margarita 250um sieve is efficient
Morphological observation of spores for identification
Morphology of spores is a basis for identification of arbuscular mycorrhizal fungi because the hyphae and the organs such as arbuscules and vesicles are not specific to species Spores collected from the soil often deteriorate so that they may be used only for tentative identification at genus level For detailed observation culturing the target AM fungus is required and the spores from pot culture should be used At least 30-50 spores from the same morphological spores type should be observed and more observation is required
1 Observation of intact spores under dissecting
microscope Spore collected from soil or
Rhizosphere Plant soil
1 (w ith roo ts)
Pl ant trap culture Sieving
Soil trap culture ~ I
-- r
1 i-~II (- soi l
~ I Sores
Fig 5 Methods tor trapping AM tungi
culturing medium is put in a watch glass or a
small Petri dish and their shape colour and the attachment to spores are observed Spores should be classified into each spore type based
upon morphology For each spore type detailed
observation is required
For colour description standard colour chart
such as soil colour chart or colour chart of
glomalean fungi (INVAM colour chart) should be
used The colour chart should be under the same
illumination as used for spore observation because
the colour itself is greatly affected by the
characteristics of illumination It should reminded
that attachment such as soporiferous saccule for
Acaulosporaceae and subtenting hyphae for
Gigasporaceae are often lost during collection of
spores from soil
2 Observation of spores mounted on slide glass
under a compound microscope Spores are
mounted with polyvinyle lactoglycerol (PVLG)
on a slide glass Several slides should be made
Intact and crushed spores mounted with PVLG
Polyvinyle alcohol (polymerization 1000-1500)
Fig 6 Single spore isolation
Source Biofertilizers Manual by FNCA Forum fo r Nuclear Cooperation in Asia (FACA) March 2006 published by Japan Atomic Industrial Forum Tokyo Japan
102 AGRICtITURAL REVIEWS
166 g is dissolved in 10 ml deionized water
Complete dissolution may need 6 hours at 80 dc The dissolved polyvinyle alcohol is mixed
with 10 ml of lactic acid and 1 ml of glycerol it
can be used more than a day after preparation
The Important morphological characters of AM
fungi is indicated in Tabie 3 and Fig 4
Culturing of AM fungi AM fungi need the symbiotic association
with plants for proliferation Therefore culturing AM
fungi is to indicate AM fungi to host plant and to
grow the inoculated plant For the AM fungal
inoculum spores collected from soil can be used
However spores in soil are not always active in
colonizing plants Therefore trapping culture is often
employed Soil of sieving of soil is used as medium
(Soil Trap Culture) To isolate AM fungi colonizing
roots mycorrhizal plants collected from field can be
transplanted to potting medium as Plant Trap Culture
(Fig 5) (Murakoshi et ai 1998)
1 Host plant Various mycotrophic plants can be
used viz leguminous species (Trifolium spp Medicago spp Lotus japonicus) (ie Lolium spp Paspalum notatum) and other herbaceous
species (ie Plantago spp) Onion and leek
(Alliumspp ) and maize sorghum are also good
hosts
2 Growth condition Any conditions which support good growth of host plant plants are acceptable To avoid contamination a growth chamber is preferred If green house is used it should be kept clean It should be kept clean It should be remanded that cross-contamination or contamination from dust is inevitable under open-air conditions even in growth chamber To prevent cross-contamination from other pot culture in the same chamber use of plastic bag is advisable (Walker and Vestberg 1994)
3 Procedure A Plant Trap Culture
i Rhizosphere soil is collected with shoots of
trap plant cut at the crown and roots are
finely chopped and mixed with the soils using
a sharp chopper
ii The chopped roots and soil are mixed l1 (vv )
with autoclav ed coarse sand in a
mechanical mixer or massaged well in a jurable plastic bag
iii The soil mix is then transferred to a 15 cm plastic
pot
Iv Plants seeds of suitable trap plants such tropical signal grass into the pot
as
v The pot cultures are maintained in a green house
for at least 3 months and check sporulation
from time to time By the fourth month AMF
sporulation may be at the peak Sanitary tests may also be carried out to ensure no
contamination from parasitic fungi occurs
vi Keep fertilizer application to a minimum to
encourage AMF proliferation
vii Trap culture pots are later left to dry under shade
for up to two weeks
viiiHarvest the spores using the sieving and
decanting techniques or the denSity-gradient
centrifugation technique
ix The mono specification spores are ready for
inoculation onto seedlings of the desired crops
B Single spore isolation To purify an isolated
fungus single spore isolation is needed
Even if the spores are morphologically
identical it often contains contaminants
whose morphology is very similar For single
spore isolation no specific equipment is
needed For effic ient handling two sets of
dissecting microscope are placed side by
side One microscope is for picking up
single spore from spores in a dish Another
is for inoculation of a spore on roots S
seedling placed in the pot is placed under
another microscope Under the fist
microscope single spore is picked up and
transferred under the second microscope
Under the second microscope the spore is
placed on fine roots or root tip of the
seedlings (Fig 6) If culture is successful
103 VoL 31 0 2 2(10
the detailed morphological observation is or the leaf litter under the tree is removed About required Potting medium can be dried by 10 g per plant of VA mycorrhizal biofertilizers is stopping watering to the pot After the host applied to the root hairs system and then plant wilt the dried soil containing spores covered with soil can be stored for a year at 4-5 0 C
3 For transplanting seedling simply sprinkle VA
Inoculation of Arbuscular Mycorrhizae mycorrhizal biofeliilizers adjacent to the plant roots and cover with soil l Seed inoculation- Most of cereals legume
sorghum cotton and vegetables are inoculated 4 VA mycorrhizal biofertilizers can be used in
with seed VAM culture containing infected root combination with several types of biofertilizers (Rhizobium PSB PGPR) bits viable AM-fungal propagules (including
spores) containing 8-10 viable sporesg VAM Problems and potential for VAM inoculum
culture 2 kglha is used production and utilization
2 Soil application- The AM or VAM culture should l Situation where effective indigenous VAM be applied to the open furrows 15 kglha using population is low
field soil to bulk the carrier This method is 2 Inoculation is best for transplanted crops where suitable for fruit crops and plantation crops For soil disturbances have reduced VAM
huit trees soil under the plant canopy is trenched inoculation potential
REFERENCES Al-Karaki GN and Clark RB (1990) Plant Nutr 22 1775-1784
Auge RM (2004) Canadian J Soil Sci 84 373-381
Bryla D Rand Duniway J M (1997) Plant Sai1197 85-108
Biro B etal (2000) Applied Sail Ecol 15 159-168
Borowicz VA (2001) Ecology82 3057-3068
Clark R B and Zeto S K (2000) J Plant Nutr 23 867-902
Gange A C eta (2005) Ecolagy86 603-611
Gange A C and West H M (1994) New Phytal 128 79-87
Gerdemann Jw and Nicolson T H (1963) Trans British MvcolagicaISac 46 235-244
Harley J L and Smith S E (1983) Mycorrhizal Symbiosis Academic Press London
Hwang S E etal (1993) Plant Dis 77 1093-1098
Hodge A (2000) FEMS Microbial Eco 32 91-96
Hodge A eta (2001) Nature 413 297-299
Jallali BL and Chand H (1987) in Proceedings of iSI Asian conference on Mycorrhizae at Madras (Mahadevan et
al Eds)p 209-214
Johansson J eta (2004) FEMS Microbial Eca 48 1-13
Karagiannidis N eta (2002) Sci Hart 94 145-156
Kasiamdari R S et al (2002) Plant and Soil 238 235-244
KjolIer R and Rosendahl S (1996) Mycorrhizae6 487-491
Koide R T eta (2000) NewPhytologyl48 163-168
Matsubara Y et al (2002) J Japan Soc Hod Sci 71 370-374
Morton J B and Benny G L (1990) Mycatoxan 37 471-491
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240
102 AGRICtITURAL REVIEWS
166 g is dissolved in 10 ml deionized water
Complete dissolution may need 6 hours at 80 dc The dissolved polyvinyle alcohol is mixed
with 10 ml of lactic acid and 1 ml of glycerol it
can be used more than a day after preparation
The Important morphological characters of AM
fungi is indicated in Tabie 3 and Fig 4
Culturing of AM fungi AM fungi need the symbiotic association
with plants for proliferation Therefore culturing AM
fungi is to indicate AM fungi to host plant and to
grow the inoculated plant For the AM fungal
inoculum spores collected from soil can be used
However spores in soil are not always active in
colonizing plants Therefore trapping culture is often
employed Soil of sieving of soil is used as medium
(Soil Trap Culture) To isolate AM fungi colonizing
roots mycorrhizal plants collected from field can be
transplanted to potting medium as Plant Trap Culture
(Fig 5) (Murakoshi et ai 1998)
1 Host plant Various mycotrophic plants can be
used viz leguminous species (Trifolium spp Medicago spp Lotus japonicus) (ie Lolium spp Paspalum notatum) and other herbaceous
species (ie Plantago spp) Onion and leek
(Alliumspp ) and maize sorghum are also good
hosts
2 Growth condition Any conditions which support good growth of host plant plants are acceptable To avoid contamination a growth chamber is preferred If green house is used it should be kept clean It should be kept clean It should be remanded that cross-contamination or contamination from dust is inevitable under open-air conditions even in growth chamber To prevent cross-contamination from other pot culture in the same chamber use of plastic bag is advisable (Walker and Vestberg 1994)
3 Procedure A Plant Trap Culture
i Rhizosphere soil is collected with shoots of
trap plant cut at the crown and roots are
finely chopped and mixed with the soils using
a sharp chopper
ii The chopped roots and soil are mixed l1 (vv )
with autoclav ed coarse sand in a
mechanical mixer or massaged well in a jurable plastic bag
iii The soil mix is then transferred to a 15 cm plastic
pot
Iv Plants seeds of suitable trap plants such tropical signal grass into the pot
as
v The pot cultures are maintained in a green house
for at least 3 months and check sporulation
from time to time By the fourth month AMF
sporulation may be at the peak Sanitary tests may also be carried out to ensure no
contamination from parasitic fungi occurs
vi Keep fertilizer application to a minimum to
encourage AMF proliferation
vii Trap culture pots are later left to dry under shade
for up to two weeks
viiiHarvest the spores using the sieving and
decanting techniques or the denSity-gradient
centrifugation technique
ix The mono specification spores are ready for
inoculation onto seedlings of the desired crops
B Single spore isolation To purify an isolated
fungus single spore isolation is needed
Even if the spores are morphologically
identical it often contains contaminants
whose morphology is very similar For single
spore isolation no specific equipment is
needed For effic ient handling two sets of
dissecting microscope are placed side by
side One microscope is for picking up
single spore from spores in a dish Another
is for inoculation of a spore on roots S
seedling placed in the pot is placed under
another microscope Under the fist
microscope single spore is picked up and
transferred under the second microscope
Under the second microscope the spore is
placed on fine roots or root tip of the
seedlings (Fig 6) If culture is successful
103 VoL 31 0 2 2(10
the detailed morphological observation is or the leaf litter under the tree is removed About required Potting medium can be dried by 10 g per plant of VA mycorrhizal biofertilizers is stopping watering to the pot After the host applied to the root hairs system and then plant wilt the dried soil containing spores covered with soil can be stored for a year at 4-5 0 C
3 For transplanting seedling simply sprinkle VA
Inoculation of Arbuscular Mycorrhizae mycorrhizal biofeliilizers adjacent to the plant roots and cover with soil l Seed inoculation- Most of cereals legume
sorghum cotton and vegetables are inoculated 4 VA mycorrhizal biofertilizers can be used in
with seed VAM culture containing infected root combination with several types of biofertilizers (Rhizobium PSB PGPR) bits viable AM-fungal propagules (including
spores) containing 8-10 viable sporesg VAM Problems and potential for VAM inoculum
culture 2 kglha is used production and utilization
2 Soil application- The AM or VAM culture should l Situation where effective indigenous VAM be applied to the open furrows 15 kglha using population is low
field soil to bulk the carrier This method is 2 Inoculation is best for transplanted crops where suitable for fruit crops and plantation crops For soil disturbances have reduced VAM
huit trees soil under the plant canopy is trenched inoculation potential
REFERENCES Al-Karaki GN and Clark RB (1990) Plant Nutr 22 1775-1784
Auge RM (2004) Canadian J Soil Sci 84 373-381
Bryla D Rand Duniway J M (1997) Plant Sai1197 85-108
Biro B etal (2000) Applied Sail Ecol 15 159-168
Borowicz VA (2001) Ecology82 3057-3068
Clark R B and Zeto S K (2000) J Plant Nutr 23 867-902
Gange A C eta (2005) Ecolagy86 603-611
Gange A C and West H M (1994) New Phytal 128 79-87
Gerdemann Jw and Nicolson T H (1963) Trans British MvcolagicaISac 46 235-244
Harley J L and Smith S E (1983) Mycorrhizal Symbiosis Academic Press London
Hwang S E etal (1993) Plant Dis 77 1093-1098
Hodge A (2000) FEMS Microbial Eco 32 91-96
Hodge A eta (2001) Nature 413 297-299
Jallali BL and Chand H (1987) in Proceedings of iSI Asian conference on Mycorrhizae at Madras (Mahadevan et
al Eds)p 209-214
Johansson J eta (2004) FEMS Microbial Eca 48 1-13
Karagiannidis N eta (2002) Sci Hart 94 145-156
Kasiamdari R S et al (2002) Plant and Soil 238 235-244
KjolIer R and Rosendahl S (1996) Mycorrhizae6 487-491
Koide R T eta (2000) NewPhytologyl48 163-168
Matsubara Y et al (2002) J Japan Soc Hod Sci 71 370-374
Morton J B and Benny G L (1990) Mycatoxan 37 471-491
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240
103 VoL 31 0 2 2(10
the detailed morphological observation is or the leaf litter under the tree is removed About required Potting medium can be dried by 10 g per plant of VA mycorrhizal biofertilizers is stopping watering to the pot After the host applied to the root hairs system and then plant wilt the dried soil containing spores covered with soil can be stored for a year at 4-5 0 C
3 For transplanting seedling simply sprinkle VA
Inoculation of Arbuscular Mycorrhizae mycorrhizal biofeliilizers adjacent to the plant roots and cover with soil l Seed inoculation- Most of cereals legume
sorghum cotton and vegetables are inoculated 4 VA mycorrhizal biofertilizers can be used in
with seed VAM culture containing infected root combination with several types of biofertilizers (Rhizobium PSB PGPR) bits viable AM-fungal propagules (including
spores) containing 8-10 viable sporesg VAM Problems and potential for VAM inoculum
culture 2 kglha is used production and utilization
2 Soil application- The AM or VAM culture should l Situation where effective indigenous VAM be applied to the open furrows 15 kglha using population is low
field soil to bulk the carrier This method is 2 Inoculation is best for transplanted crops where suitable for fruit crops and plantation crops For soil disturbances have reduced VAM
huit trees soil under the plant canopy is trenched inoculation potential
REFERENCES Al-Karaki GN and Clark RB (1990) Plant Nutr 22 1775-1784
Auge RM (2004) Canadian J Soil Sci 84 373-381
Bryla D Rand Duniway J M (1997) Plant Sai1197 85-108
Biro B etal (2000) Applied Sail Ecol 15 159-168
Borowicz VA (2001) Ecology82 3057-3068
Clark R B and Zeto S K (2000) J Plant Nutr 23 867-902
Gange A C eta (2005) Ecolagy86 603-611
Gange A C and West H M (1994) New Phytal 128 79-87
Gerdemann Jw and Nicolson T H (1963) Trans British MvcolagicaISac 46 235-244
Harley J L and Smith S E (1983) Mycorrhizal Symbiosis Academic Press London
Hwang S E etal (1993) Plant Dis 77 1093-1098
Hodge A (2000) FEMS Microbial Eco 32 91-96
Hodge A eta (2001) Nature 413 297-299
Jallali BL and Chand H (1987) in Proceedings of iSI Asian conference on Mycorrhizae at Madras (Mahadevan et
al Eds)p 209-214
Johansson J eta (2004) FEMS Microbial Eca 48 1-13
Karagiannidis N eta (2002) Sci Hart 94 145-156
Kasiamdari R S et al (2002) Plant and Soil 238 235-244
KjolIer R and Rosendahl S (1996) Mycorrhizae6 487-491
Koide R T eta (2000) NewPhytologyl48 163-168
Matsubara Y et al (2002) J Japan Soc Hod Sci 71 370-374
Morton J B and Benny G L (1990) Mycatoxan 37 471-491
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240
104 AGRICUTURAL REVIEWS
Newman EI and Reddell P (1987) New Phytology 106 745-751
Phillip J M and Hayman D S (1970) Trans 01 British Mycological Soc 55 158-166
Piotrowski J S etal (2004) New Phytology 164 365-373
Rilling Me eta (2001) PlantandSoil233 167-177
Scheublin T R eta (2004) AppliedEn vi ron Microbiology 70 6240-6246
Sreenivasa M N And Bagyaraj D J (1989) Plant and Soil 119127-132
Sorensen N eta (2005) PlantandSOI273 101-114
Sylvia D M and Chellemi D O (2001) Adv Agron 73 1-33
Talavera M etal (2001) Appl Entomol 200136 387-392
Torres-Barragan A etal (1996) Mycorrhizae6 253-257
Udaiyan Keial (1999) J Environ BioI 20 167-175
Vazquez M M et al (2002) Sod BioI and Biochem 34 899-905
Walker C and Vestberg M (1994) Agric Sci Anland3 233-240