nsf ws big data challenge

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THE BIG DATA CHALLENG E BRETT POWERS , DAVID SHRAYBER, CHRISTINA LAM

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Page 1: NSF WS Big Data Challenge

THE BIG DATA

CHALLENGE

BRETT POWERS , DAVID SHRAYBER, CHRISTINA LAM

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INTRODUCTION Hypoxia: Oxygen Concentration < 85%

Bradycardia: > 0.6 seconds/beat

Apnea: Breathing rate > 10 sec

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1st HYPOTHESISThe QRS variability can be used as a marker to detect hypoxia.

- QRS complex

- Code

- Findings

- Machine Learning

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QRS COMPLEX - ECG can measure apnea and

bradycardia through the R-R interval.

- QRS complex amplitude precursor

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2831912/?report=printable

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CODE

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CODE

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● Peak and Trough detection

● Interpolation

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Chaotic Variability

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Stable

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Chaotic

Peak - Trough Distance

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Stable

Amplitude

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10 minutes - 15 minutes

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10 minutes - 15 minutes

Stable2.25 minutes

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2 hours 20 minutes - 2 hours 28 minutes

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5 hours 37 minutes - 5 hours 43 minutes

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15 hours 45 minutes - 15 hours 57 minutes

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Whoa……..

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Random blind test on a hypoxia showed similar precursors.

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Blind Test 2

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Nailed It!

Blind Test 2

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Baby 1801 Test

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MACHINE LEARNING

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2nd Hypothesis Detecting the REM cycle by an ECG reading in conjunction with the abdominal movements, apnea can be predicted.

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http://pediatrics.aappublications.org.sci-hub.ac/content/57/1/142?variant=short&sso=1&sso_redirect_count=1&nfstatus=401&nftoken=00000000-0000-0000-0000-000000000000&nfstatusdescription=ERROR%3a+No+local+token

REM sleep inhibits mechanisms that affect the respiratory system.

REM Sleep → Difficulties in breathing for preterm babies.

Ideas

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RESEARCH Premature babies spend a lot of time in REM sleep.

Therefore, Apnea usually occurs during the REM cycle.

Arousal from REM sleep may trigger or precursor to apnea and hypoxia.

Since moter activities after being woken up are grouped together with laryngeal closure

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3158333/pdf/431_2011_Article_1409.pdf

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Taking EEG readings and correlating them with the ECG readings, we can find some markers before REM sleep.

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Thank You For Being Awesome!

Dr. IndicDr. PaydarfarAlan Gee (Cal Tech Guy)Spon 1502Spon 1801Spon 1301

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Questions