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Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U. Dini, Univ. Firenze Istituto di Analisi dei Sistemi ed Informatica “A. Ruberti” - CNR Viale Manzoni 30, Roma, 00185, Italy

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Page 1: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Modelling blood coagulation

Part I: the biological background

Prague, August 2011

Antonio Fasano Dipartimento di Matematica U. Dini, Univ. Firenze

Istituto di Analisi dei Sistemi ed Informatica “A. Ruberti” - CNR Viale Manzoni 30, Roma, 00185, Italy

Page 3: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

When a lesion is produced on a blood vessel an impressively complex machine is set in motion

leading to coagulation. The result is the

formation of a clot (or thrombus) sealing the wound.

Blood coagulation goes in parallel with the

antagonist process (fibrinolysis) whose goal is the dissolution of the clot.

Page 4: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

A two-step process

• primary hemostasis: platelets bind to von Willebrand Factor and collagen at the wound site, forming the so-called “white thrombus”

• secondary hemostasis: goes through a chemical cascade in which many “Factors” intervene

clot remains confined

Page 5: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

The hemostatic system is in a state of permanent background activity

but also normally inhibited

an engine permanently on a brake constantly applied

Page 6: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Maria Spelterini crossing Niagara Falls (July 7, 1876)

Difference: blood coagulation has to

be fast .

Similarity: no mistakes are allowed

Page 7: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Correct path for blood coagulation is narrow

Page 8: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

thrombosis

Page 9: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

What a pulmonary embolism can produce

(courtesy of Dr. Jeremi Mizerski)

Page 10: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Bleeding disorders

Page 11: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Thrombocytopenic purpura (due to low platelets count)

Page 12: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

FIBRIN

PLATELETS (linked among themselves and to fibrin)

RBC

WBC

Clots are many components systems

Page 13: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Some history

Page 14: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

The Yellow Emperor (Huang Di)

Before 2600 B.C.

Symptoms attributable to arterial thrombosis

Page 15: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Hippocrates ( 460 370 B.C.)

With the term leucophlegmatia describes limbs swelling

Hippocrates’ humoral theory: blood, phlegm, black bile, yellow bile

Page 16: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Aristotle (384-322 B.C.)

Blood coagulation needs some “fibrous material” and is due to heat loss

A fibrous component of clots was isolated by Marcello Malpighi (1628-1694)

Page 17: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Galen of Pergamon

Aelius (Claudius) Galenus (129-200?)

Coined the word thrombosis

(from the Greek thrombos = clot)

He sketched an erroneous scheme of blood circulation.

Page 18: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

William Harvey (1578-1657)

Exercitatio anatomica de motu cordis et sanguinis in animalibus (1628)

Firts systematic description of blood circulation

Page 19: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Robert Hooke (1635 –1703)

Discovered what he called cells in thin slices of cork (1665)

Page 20: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Anthony Leeuwenhoek (1632-1723)

Greatly improved the microscope.

He investigated on RBC’s (1674)

(previously identified in frogs by Jan Swammerdam (1658 ))

Page 21: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Jean-Louis Petit (1674–1750)

French surgeon

Connected the formation of clots to the process of

hemostasis

Page 22: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

The three elements

Hypercoagulability Hemodynamic changes (stasis, turbulence) Endothelial injury/dysfunction

are today known as the “Virchow triad”

Rudolf Virchow (1821-1902)

described pulmonary embolism in 1846

Page 23: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Giulio Bizzozero (1846 – 1901)

Max Johann Sigismund Schultze (1825-1874)

The discovery of platelets (1865)

Page 24: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Platelets have a number of receptors on their membrane which intervene in many processes:

• aggregation,

• binding to specific molecules,

• reacting to stress,

• etc.

Page 25: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U
Page 26: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Platelets perform a number of operations

They possess two families of granules: -granules and dense ()-granules, able to release various substances when platelets are “activated”, able to activate more platelets (*)

They can synthesize factors important in the coagulation process

They can modify their cytoskeleton to assume different shapes

(*) ASPIRIN exterts its anticoagulant action at this stage

Page 27: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

activated platelets

Red Blood Cells (RBC): diam. 8 m, concentration 56/mm3, lifespan 120 days (approximate data), no nucleus

Platelets: diameter of 24 m, life span 5-9 days, discoid shape (at rest), concentration 1.54105 /mm3, no nucleus

star shaped platelets (rolling)

adventitia Tunica media

intima

Page 28: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Erik Adolf von Willebrand (1870-1949), Finland

Identified (1924) the bleeding disorder later called von Willebrand disease (vWD)

Today we know that vWD is due to deficiency or dysfunction of the so-called von Willebrand Factor (vWF): it is released by Weibel-Palade bodies

Page 29: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

vWF is one of the many “Factors” entering the coagulation process

Some of the Factors have been labelled by Roman numbers

in the order of their discovery: FI – FXIII

Usually they come in pairs: inactivated (usually a zymogen = enzyme precursor) and activated (usually an enzyme)

FI = fibrinogen FIa = fibrin : the polymer making the clot skeleton

FII = prothrombin FIIa = thrombin (has a key role)

There are many more !!

They act through a chemical cascade

Page 30: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Rome (1958). Committee to number coagulation Factors

Page 31: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

A first scheme for blood coagulation, proposed in 1905 by Paul Morawitz, was based on just four factors:

• prothrombin FII

• thrombin FIIa

• fibrinogen FI

• fibrin FIa

They do intervene in the last steps of the cascade

Page 32: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

The 3-pathway Cascade Model was proposed in 1964 independently by

and by

It has remained unquestioned till very recently

Page 33: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

The revolution of the last decade

etc…

Page 34: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Blood coagulation has two stages:

• primary hemostasis

• secondary hemostasis (cell-based model)

Page 35: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Primary Hemostasis

Platelets rolling on the blood vessel wall adhere at the lesion site to von Willebrand Factor and to Collagen

This is a very complicated 2-step process Two kinds of receptors intervene

(fast-reversible/slow-irreversible)

we omit the details

vWF can be released by activated EC’s even when damage is limited (Z. Xu et al. Soft Matter 5 (2009) 769-779)

Page 36: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Secondary hemostasis

(the cell-based model)

The triggering event is the exposure to

blood of the Tissue Factor (TF) contained

in the endothelium, which combines in a

complex with FVIIa circulating in very small quantities.

Page 37: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Initiation

End.Cell +TF

FVIIa FVII

End.Cell +TF

FVIIa FIX

FIXa

FX

FXa

FV

FVa

diffuses to platelets

End.Cell +TF

FXa+FVa: prothrombinase

FII FIIa Thrombin (small amount)

excess FXa inactivated

Lesion site

FVIIa available in small amounts in circulating blood

Activates complex TF-FVII

TF-FVII

Page 38: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Amplification

Small amount of thrombin and of FIXa available

FIIa breaks vWF

FVIII

vWF

FVIII

Platelet FV

FVa

+ stress

Cross links among platelets

FXI

FXIa

FIIa

FVIIIa

produces more FIXa

Platelets are activated and release the contents

of granules

Three actions of thrombin

1

2

3 and

Page 39: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

activated platelet

FVIIIa + FIXa tenase

Propagation

FX

FVa + FXa prothrombinase

FII

FIIa more FVa is produced ETC.

To fibrin production …

Page 40: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

FIIa

FI

FIa

FXIII

FXIIIa

Fibrin network

cross links

Fibrin production

Consolidation

Page 41: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

thrombin

Endothelium TM

termination

TAFI (protects fibrin)

PC APC PS Va

VIIIa

AT III

TFPI

FIXa, FXa, FXIa, FXIIa, (FIIA)

FXa, TF+FVIIa

Thrombin Activatable Fibrinolysis Inhibitor

Tissue Factor Pathway Inhibitor

Heparin enhanced

Page 42: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

fibrinolysis

Plasminogen (accumulated during the thrombus growth)

TAFI (Thrombin Activatable Fibrinolysis Inhibitor)

tPA urokinase

Plasmin

Grown fibrin network

fibrinolysis

(some fragments may recombine)

(retarded by plasmin inhibitors)

slowly released by endothelium

(positive feedback: produces tPA)

(tissue Plasminogen Activator)

Page 43: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

WARNING

The preceding description has been simplified

• there are many more platelets activators (ADP, TxA2, etc.)

• vitamin K has an important role in catalyzing most of

the “activations”

• platelets may produce FXI and even TF !!!

Page 44: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

WARNING

The preceding description has been simplified

• there are many more platelets activators (ADP, TxA2, etc.)

• vitamin K has an important role in catalyzing most of

the “activations”

• platelets may produce FXI and even TF !!!

A further revolution??

Page 45: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Papers reporting evidence of platelet-derived TF

G. Davì, C Patrono. Platelet activation and atherothrombosis. N.Engl. J. Med. 357 (2007) 2482-2494. O. Panes, V. Matus, C.G. Sàez, T. Quiroga, J. Pereira, D. Mezzano. Human platelets synthesize and express functional tissue factor. Blood 109 (2007) 5242-5250.

Page 46: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

fibrin fibres are formed through a multi-step process

For details about fibrin and fibrin fibres formation see A.L. Fogelson, J.P.Keener. Toward an understanding of fibrin branching structure. Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 81 (2010) 1-24

Page 47: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

A way of understanding how each element works is to study the

bleeding disorder associated with its

deficiency or dysfunction

Page 48: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

The list of bleeding disorders is impressively long

For instance

Hemophilia A, B, C are caused by deficiency of

Factors VIII, IX, XI respectively

Page 49: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

The inadequacy of the 3-pathway cascade model

Page 50: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

High Molecular Weight Kininogen

(slow activator of FXII, produced by

platelets)

Kallikrein: fast activator of FXII

From now on the process is similar to the cell-based

model

FVIII bypassed by the extrinsic pathway

Page 51: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

In the cascade model

• the intrinsic and extrinsic pathway can independently produce coagulation

• the extrinsic pathway bypasses FVIII

Experimental facts:

• FXII deficiency mild (or no) bleeding disorder

• FVIII deficiency is the cause of Hemophilia A

Page 52: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

We conclude that

• the extrinsic pathway cannot be correct

• the intrinsic pathway either is not present or at most it gives a small contribution

Page 53: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

FXII can autoactivate in the presence of

artificial surfaces

(coagulation on implanted artificial bodies is a matter of great concern)

Page 54: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Modelling bleeding disorders is important in order to model therapies

What is the effect of Aspirin

Coumadin etc. ?

How to prevent coagulation after the implantation of stents?

Page 55: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Clotting is essentially related with the blood flow conditions

• thrombi in arteries are different from those in veins • altered flow conditions can cause thrombosis: remarkable examples are

atrial fibrillation Deep Vein Thrombosis (DVT)

Page 56: Part I: the biological background - prague-sum.com · Modelling blood coagulation Part I: the biological background Prague, August 2011 Antonio Fasano Dipartimento di Matematica U

Hence, whatever model is taken for the biochemical process has to be coupled with blood flow

Blood rheology is another very complicated field …