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PULSE PROGRAM CA T ALOGUE: I. 1D & 2D NMR EXPERIMENTS Teodor Parella Servei RMN, Universitat Autònoma de Barcelona E-mail: [email protected] TOPSPIN v2.0 NMRGuide UAB

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PULSE PROGRAM CATALOGUE:

I. 1D & 2D NMR EXPERIMENTS

      

 

Teodor Parella Servei RMN, Universitat Autònoma de Barcelona

E-mail: [email protected]                

 

TOPSPIN v2.0 NMRGuide

                                                     UAB

                                                           

 Copyright (C) 2006 by Bruker BioSpin GmbH

All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form, or by any means without the prior consent of the publisher.

 03-03-2006 Part Number --------

 Product names used are trademarks or registered trademarks of their respective holders.

 

Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

    

VOLUME I: 1D & 2D NMR EXPERIMENTS  

• Table of Contents.................................................................................................. 1-2

• Introduction............................................................................................................. 3-6

• Standard Pulse Schemes 1. Basic 1D pulse sequences............................................................................ 7 2. T1 & T2 Relaxation..................................................................................... 13 3. Selective Excitation & Selective 1D Experiments..................................... 15 4. 1D Solvent suppression............................................................................... 21

Presaturation Jump and Return Watergate Excitation Sculpting WET

5. 19F specific experiments............................................................................. 27 6. 2H specific experiments.............................................................................. 29 7. Basic 1D Gradients...................................................................................... 31

• Homonuclear Experiments 8. 2D COSY.................................................................................................... 33 9. 2D COSY-DQF........................................................................................... 37 10. 2D SECSY.................................................................................................. 41 11. 2D RELAY................................................................................................. 43 12. 2D TOCSY ................................................................................................ 47 13. 2D ROESY ................................................................................................ 53 14. 2D NOESY ................................................................................................ 57 15. 1D & 2D Double-Quantum........................................................................ 63 16. 2D J-Resolved .......................................................................................... 67

• Heteronuclear 1D & 2D X-detected experiments 17. Decoupler Pulse Calibration....................................................................... 69 18. 1D DEPT & INEPT..................................................................................... 73 19. 2D HETCOR.............................................................................................. 81 20. 2D COLOC................................................................................................. 87 21. 2D Heteronuclear J-resolved....................................................................... 89 22. 2D HOESY.................................................................................................. 91 23. 1D & 2D INADEQUATE........................................................................... 93

• 2D Inverse Experiments 24. Basic 1D Inverse........................................................................................ 97

Direct 2D Correlations 25. HMQC........................................................................................................ 101 26. DEPT-HMQC............................................................................................. 111 27. HSQC.......................................................................................................... 113 28. Multiplicity-edited HSQC........................................................................... 127 29. Constant-time correlations.......................................................................... 133

CT-HSQC CT-HMQC

30. Inverse-INEPT. ............................................................................................ 137 31. Spin-edited HSQC for 1J(XH) determination............................................. 139

2D HSQC-α,β 2D IPAP-HSQC 2D J-modulated CT-HSQC

32. TROSY ...................................................................................................... 145 33. CRINEPT.................................................................................................... 151

2D HMQC hybrids 34. HMQC-COSY............................................................................................. 153

H2BC.......................................................................................... 35. HMQC-TOCSY........................................................................................... 157

 

  

© 2006 BRUKER Biospin, Teodor Parella. 1

 

Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

 

  

36. HMQC-ROESY........................................................................................... 163 37. HMQC-NOESY........................................................................................... 167

2D HSQC hybrids 38. HSQC-TOCSY .......................................................................................... 171 39. HSQC-ROESY .......................................................................................... 179 40. HSQC-NOESY .......................................................................................... 183

2D Long-Range Correlations 41. HMBC ....................................................................................................... 187 42. Measurement of long-range proton-carbon coupling constants ................ 193

Phase-sensitive HMBC CT-HMBC J-HMBC Long-range HSQC (HSQMBC) EXSIDE HETLOC HSQC-HECADE

43. ADEQUATE ............................................................................................. 201 1,1-ADEQUATE 1,n-ADEQUATE n,1-ADEQUATE n,n-ADEQUATE

• Miscellaneous Experiments 44. 1D, 2D & 3D Diffusion/DOSY.................................................................. 207

STE STEBP DSTE DSTEBP LED LEDBP DOSY-COSY DOSY-TOCSY DOSY-NOESY

45. 1D & 2D Saturation Transfer Difference (STD)........................................ 213 STD-TOCSY STD-NOESY STD-HSQC

46. 1D & 2D Experiments using CLEANEX................................................... 223 CLEANEX-HSQC CLEANEX-TROSY

47. 1D & 2D LC-NMR Experiments............................................................... 227 48. Basic Solid-State NMR Experiments.......................................................... 235

• Appendix 1. Pulse Program Info...................................................................... 237

• Appendix 2. Pulse Program Parameters .................................................... 241

• Appendix 3. Relations with edprosol/getprosol ....................................... 246  

  

VOLUME II: BIOMOLECULAR NMR EXPERIMENTS....................... 250  

              

© 2006 BRUKER Biospin, Teodor Parella. 2

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

     

BRUKER Pulse Program

Catalogue  

 

written by Teodor Parella    

This catalogue presents the pulse sequence diagram for all standard pulse programs included in TOPSPIN v2.0. This information is part of NMRGuide 4.1, also available for BRUKER AVANCE spectrometers.

 These pulse programs are located in the

 /TOPSPINHOME/pp/stan/nmr/lists/pp

 

directory after conventional installation using expinstall and they can be visualized directly into the TOPSPIN program from the PulsProg section. Otherwhise, alternative pulse program sequence representation is also available using the showpp program.

 For more details on pulse programs, parameter sets, tutorials, experiment descriptions, bibliographic references and other related information, please refer to the electronic version of NMRGuide 4.1.

                                       

©2006: Bruker BioSpin , Teodor Parella 3

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NMRGuide auu o nll'r•l l

Pulse Pn1gram. by alphabetical order .A IB Ic ID IE IF IG IH II IJ IK IL IM IN IoIP IQ IRIsI T I U IV Iw IX IY IZ - all v

Pulse Progre.m Directories v J BIUif(l'" $ l Nomenclature ofParam.e-ters Nomenclature ofPulse Programs

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Pu.lle rrroarams About Last Changes....•  Pulse Progrsm Reference Manual

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lD E:\.']leiiments 2D Homonuclear  

2D Heteronuclear 2D Inverse and Gradieuts  

Ia Homonudear

Solvent Suppression Homonw:lear in0 Selective Excitation Homonw:lear & Gradients Selective G-...:- ts · RO Selective & Gradients .nuu.cn Ill-'"2

Band-Selective Homon.w:lear

 

X-detected In.vuse from f2 clwmel from f3 clwmel

 

from f2 ch.ann.el from f3 ch.ann.el 2D1ROSY from f2 and f3 ckann.el Relu:ation from f3 ckann.el Inverse X-IDtered

X-de d Inverse Inverse & Gradients Miscellan.eous

 ftJCHMeasurement

 3D Experiments 3D Miscellaneous Miscellaneous Include Files

 

Triple-Resonance Backbone Backbone-Si4e chain 2H-decoupled Backbone Backbone-Side chain lROSY Backbone Backbone-Si4e cllain. 2H-decoupled

Homonw:lear Double-Resonance from f2 ch.ann.el from G ch.ann.el 3DNOE X-fi.Jared/ecllied Coupling Constants Couplillg CoJtStan.ts

LC-NMR Calibration. & Tests Solid-State DiffiasiDn ur 2a Nw:leic Acids

AWJU:e.ind Delay.incl Daz.btcl De.btcl Gnd.btcl Solids.btcl Syscon.f.incl

         

 

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        IIi

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Step 1: Is the Specn·o•neter Ready? Step 2: Preliminary Set-up Step 3: Data Acquisition (eda)

Installation & Configuration (cf & expinstall) About Sample Preparation Create a new file (edc) Tests & Calibrations (edprosol) Insert the sample (ij/ej) Read Parameter Set (rpar ...) Defining the probe (edbead) Select the solvent (lock) Set Pulses (getprosol)

Tuning & Matching ... (wobb) ModifY parameters (ased) Shirnrrllng ... (rsh ...) Start Acquisition (rga & zg)

Step 4: Data Processing (edp)

Transforming the data (ft, xfb ...) Phase correction (apk) Baseline correction (abs) Plot (edg, xwi.nplot)

Step 5: Automation ...

Using macros ... (edmac) Using icomum·...(Biotool) buttomum·& butsehunr AU Programs (xau)

Step 6: Deciding what to do?

Which experiments can I do ...

Starting Parameter Set... Routine IDAR experiments

Interpreting the spectra... G

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Pulse Program Catalogue NMRGuide 4.1 Topspin 2.0

RUKER lOSPIN

  

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©2006: Bruker BioSpin , Teodor Parella 6

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide      

 

BASIC 1D PULSE SEQUENCES                                   

©2006: Bruker BioSpin , Teodor Parella 7

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

    

• Standard Experiments:  

Conventional 1H spectrum (zg30 / zg / zg0 | PROTON) Acquired as 2D (zg2d)

1D 1H Homodecoupling (zg0hd / zghd / zghd.2 | PROHOMODEC) 1D 1H Band-selective homodecoupling (zghc / zghc.2) NOEDIFF experiment:

Single irradiation (zgf2pr) Using frequency list (noediff / noediff.2 / noedif.2 | NOEDIFF) Irradiation multiplet frequencies within one multiplet (noemul)

13C spectrum with selective 1H decoupling using CW (zgcw30 / zgcw / zg0cw) 1H-decoupled 13C spectrum (zgdc30 / zgdc / zg0dc | C13CPD) 1H-coupled 13C spectrum (zggd30 / zggd / zg0gd | C13GD) 1H-decoupled 13C spectrum without NOE (zgig30 / zgig / zg0ig | C13IG) 1H,31P-decoupled 13C spectrum without NOE (zgfbig)

Antiring sequence (aring, aring2) 1D sequence for suppression of background signals using composite pulse (zgbs)

 

• Examples:  

31P-decoupled 1D 1H spectrum (zgig30 / zgig | PROP31DEC) 11B-decoupled 1D 1H spectrum (zgig30 / zgig | PROB11DEC)

 1H-decoupled 15N spectrum without NOE (zgig / zgf3ig | N15IG) 1H-coupled 15N spectrum without NOE (zg | N15) 1H-decoupled 31P spectrum (zgpg30 | P31CPD) 1H-coupled 31P spectrum (zg30 | P31)

 

• Standard BRUKER parameter sets available for other nuclei:  

1D 11B spectrum ( zg | B11ZG) 1D 17O spectrum (zg | O17ZG) 1D 23Na spectrum (zg | NA23ZG) 1D 27Al spectrum (zg | AL27ND) 1D 1H-decoupled 29Si spectrum (zgig | Si29IG) 1D 35Cl spectrum (zg | CL35ZG) 1D 37Cl spectrum (zg | CL37ZG) 1D 71Ga spectrum (zg | GA71ZG) 1D 71Ga spectrum (zg | SE77ZG) 1D 103Rh spectrum (zg | RH103ZG) 1D 111Cd spectrum (zg | CD111ZG) 1D 113Cd spectrum (zg | CD113ZG) 1D 1H-decoupled 119Sn spectrum (zgig | SN119IG) 1D 195Pt spectrum (zg | PT195ZG) 1D 199Hg spectrum (zgpg | HG199CPD)

          

 

 ©2006: Bruker BioSpin , Teodor Parella 8

I

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

      

zg zgadc zg2d

p1

 d1

I  

     

zg0 zg30 º 30º

 d1

d1 I

        

 

  

p1 d1 is pre-scan delay p1 is read pulse aq is acquisition time td is time domain dw is dwell time

d1 ns is number of scans  

         

aq=td*dw=td/(2*sw)    

ns    

 

    

©2006: Bruker BioSpin , Teodor Parella 9

d1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 

zghc zghc.2 zghd.2 zghd zg0hd

 

    zgadchd

 

p1 º  

d1

I I I d1

  

S Homodecoupling pl24

S Homodecoupling pl24

 

S Homodecoupling

pl24   

d1=3 pl24=40 o2p=1.29(H-13) pulprog=zghd.2

               

4.3 4.2 4.1 4.0 3.9 3.8 ppm  

  

zgcw  

p1

 d1

I

zg0cw  

º

 d1

I

 zgcw30

 

30º

 d1

I  

 

S CW S CW S

pl26 pl26 CW  

pl26  

 

noedif.2 noemul

noediff noediff.2

  

1H d20

CW at pl14 on / off reson.

1H    

Also see: solvent suppression (zgf2pr)

 

 

©2006: Bruker BioSpin , Teodor Parella 10

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

 zgpg pl13 - pl12 zg0pg pl13 - pl12 zgpg30 pl13 - pl12

zgdc  

p1

zg0dc zgdc30 º 30º

 d1 d1 d1

I I I  

 S CPD S CPD S CPD

pl12 pl12 pl12     

zggd  

p1

zg0gd zggd30  

º  

 d1 d1

I I

30º  

d1 I

  

S CPD S CPD  

S CPD

pl12 pl12 pl12  

   

zgf3ig zgig p1

 d1

I

pl16  

 zg0ig

 

º

 d1

I

 zgig30

 

30º

 d1

I   

S CPD S CPD S CPD pl12 pl12 pl12

     

zgfbig  

p1

 d1

I  

   

f2 channel

f3 channel

S CPD

pl12

Y CPD

pl16    

©2006: Bruker BioSpin , Teodor Parella 11

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

         

zgbs  

90º 90º 90º

 

d1 I

  rec

1 3 2

      

 aring

   

I d1

-x  

d13 d13

 

 <Irec

        

     

I d1

aring2    

d1

 

-x

d13                              

©2006: Bruker BioSpin , Teodor Parella 12

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

T1 & T2 RELAXATION                                   

©2006: Bruker BioSpin , Teodor Parella 13

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

1H T2 measurements As 1D acquisition (cpmg1d) As 2D acquisition (cpmg) As 1D acquisition with presaturation (cpmgpr1d)

1H T1 measurements: As 1D acquisition (t1ir1d) As 2D acquisition (t1ir || PROTONT1)

T1 13C measurements (t1irpg)

 Also see: 2D HSQC for Backbone Dynamics

     

     

I d1

 t1ir1d

 180º 90º

 d7

 t1ir

180º 90º I

I d1 vd

 S

t1irpg   

CPD

pl13 - pl12 180º 90º

 d1 vd

 

       

 

Iz=I0(1-2exp(-d7/T1)       

ln(I0-Iz)=ln(2I0)-d7/T1  

  

tnull=T1*ln2  

  

 

     

cpmg cpmg1d cpmgpr1d  

   

d1 d20 d20 I  

lloooopp cc ttiimmeess

 

d1 d20 d20 I  

loop l4 times

d1 I presat

pl9

d20 d20   loop l4 times

 

  

©2006: Bruker BioSpin , Teodor Parella 14

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide      

 

SELECTIVE EXCITATION & SELECTIVE 1D EXPERIMENTS

                               

©2006: Bruker BioSpin , Teodor Parella 15

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

 

   

• Phase-Cycled:  

Using a shaped 90º pulse (selzg | SELZG1H)

Selective 1D COSY experiment (selco | SELCO1H) Selective 1D RELAY experiment (selcorl) Selective 1D TOCSY experiment (selmlzf | SELMLZF1H) Selective 1D NOESY experiment (selno | SELNO1H) Selective 1D ROESY experiment (selro | SELRO1H)

  

• Gradient-based:  

 

Using selective pulsed-field-gradient spin-echo or SPFGE (selgpse | SELGPSE)

Selective ge-1D COSY experiment (selcogp | SELCOGP) Selective ge-1D TOCSY experiment:

using MLEV (selmlgp | SELMLGP) using MLEV With ZQ suppression (selmlgp.2) using DIPSI-2 (seldigp)

Selective ge-1D NOESY experiment (selnogp | SELNOGP) Selective ge-1D ROESY experiment (selrogp | SELROGP) Selective ge-1D T-ROESY experiment (selrogp.2)

  

• 13C Selective:  

 13C Selective excitation using a shaped 90º pulse (selzgpg)

Selective 1D X-X COSY experiment (selcopg) Selective 1D INADEQUATE experiment (selina)

  

• Miscellaneous:  

2-2-6-2-2 DANTE-z scheme (dazzg) 3-6-3 DANTE-z scheme (daz363zg) 1-1 DANTE-z scheme (daz11zg)

       

                 

©2006: Bruker BioSpin , Teodor Parella 16

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

         

selzg  

 90º

selective  

I d1  

 pp1111 sp1

 

    

selco  

selcorl  

90º selective

90º selective

y y  

I d1 d14

pp1111 sp1

 

I d1 d14 d20 d20

pp1111 sp1

     

selmlzf  

90º selective

 

I d1 d14

pp1111 sp1

  

d9  

MLEV-17 vd  

p6 pl10

   

 selro selno

 

90º selective

 

I d1 d14

pp1111 sp1

 

 p15 pl11   CW

90º selective

 

I d1 d14 vd

pp1111 sp1

            

©2006: Bruker BioSpin , Teodor Parella 17

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 

selgpse  

180º selective

 

I d1

 

 Gz

   

pp1122 sp2

  

selcogp

 

G1 G1   selnogp

 180º

selective y 180º

selective  

I d1

 

 Gz

d4 d4  

pp1122 sp2

I d1

 

 Gz

   

pp1122 sp2

  d8  

 -G2

 G1 G1

 

G1 G1 G2       

 I d1

 

 Gz

  

180º selective     

pp1122 sp2

selmlgp    

d9

MLEV-17

p6 pl10

 

      

I d1

 

 Gz

   

180º selective     

pp1122 sp2

 selmlgp.2    

d9

MLEV-17

p6 pl10

G1 G1  G1 G1 G2

  

seldigp     

I d1

 

 Gz

 180º

selective     

pp1122 sp2

    d20

   

d9  

DIPSI-2  

p6 pl10

    d21

 G1 G1

 selrogp  

selrogp.2   

   

I d1

180º selective   

 p15 pl11

 

   

I d1

180º selective

x  

 

p25 pl27

x x x x

pp1122 CW sp2

Gz

 G1 G1

pp1122 sp2

Gz

 G1

-x -x -x -x -x T-ROESY

 

  G1

 

  

©2006: Bruker BioSpin , Teodor Parella 18

-----£_ _

Thr .i.n.

 

Pulse Program Catalogue NMRGuide 4.1- Topspin 2.0

RUKER IOSPIN

    

 16

 

-----------------------------ao

   ms

15a  

 

4 0 ms

 

,hj...

 15b

   

22

_j 10 ms

2 0 m s  

-------

 

5 .5 5 .0 4.5 4.0 3 . 5 3 . 0 2 . 5 2 . 0 ppm

 

        

-----........_..---· - -c=t.

{ 20b}  

Three- •pilR

- £-c=t.

}----------A -----!---,-    

{16}    

16

.23

17

B 111:> 13

 

    

4.5 4.0 3. 5 3. 0 2.5 2. 0 pprn     

  

©2006: Bruker BioSpin , Teodor Parella 19

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

     

selzgpg  

 

S  

   

I d1

CPD

pl12-pl13 90º

selective  

  pp1111 sp1

 

   

selcopg  

 

S  

90º selective

y

CPD

pl12-pl13

 

I d1 d14

pp1111 sp1

 

     

selina  

1H CPD pl12

  90º

 13C d1

 

 d4 d4

selective

 

pp1111 sp1

              

I d1

dazzg

daz11zg

daz363zg

º º 90º 0

DZ_TAU3 DZ_TAU3 2

 

0 0 0 2

loop       

©2006: Bruker BioSpin , Teodor Parella 20

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide      

 

1D SOLVENT SUPPRESSION                                   

©2006: Bruker BioSpin , Teodor Parella 21

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0  

 

 

   

1D Solvent suppression  

Classical:  

1D water presaturation: Conventional (zgpr / zg0pr | ZGPR) Using composite pulses (zgcppr | ZGCPPR) Using spoil gradient (zggppr ) Using composite pulse and spoil gradient (zgcpgppr ) From f2 channel (zgf2pr / zg0f2pr) Using shaped pulse for off-resonance presaturation (zgps)

 Jump and return:

1-1 scheme (p11) 1-3-3-1 scheme (p1331)

 Gradient-based:

 

1D WATERGATE: Using 3-9-19 scheme (p3919gp | P3919GP) Using 3-9-19 and flip back pulse (p3919fpgp) Using 90º water-selective pulses (zggpwg | ZGGPWG)

1D Excitation Sculpting: Using 180º water-selective pulses (zgesgp) Using 180º water-selective and flip back pulse (zgesfpgp) Using W5 pulse train (zggpw5)

1D WET scheme: Conventional (wet) With 13C decoupling on f2 during WET and AQ (wetdc | LC1DWTDC) With 13C decoupling on f2 during WET (wetdw)

 Related Experiments:

 o All these 1D experiments can be incorporated in any multidimensional NMR

experiment. Please refer to each chapter to check the different possibilities for 2D and 3D solvent-suppressed experiments

o LC-NMR Experiments  

       

 

                

©2006: Bruker BioSpin , Teodor Parella 22

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

    

zgpr zg0pr  

p1 º  

d1 I presat

pl9

 d1

I presat pl9

   

zgps zgcppr  

p1  

d1 I presat

off-reson.

  

d1 I presat

pl9  

 

Also see: LC-NMR experiments   

 zggppr zgcpgppr

 

p1  

d1 I presat 8 I

pl9  

Gz Gz

G1

d1

presat 8 pl9

   

G1   

 zgf2pr

 1H

d1

   1H

d1

 

zg0f2pr

CW at pl14

 1H

CW at pl14 º

 1H

 

   

Also see: noediff  

   

p11  

º

p1331

 

I d1 d19

 

I d1

 

d19  

d19  

d19

     

 ©2006: Bruker BioSpin , Teodor Parella 23

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

p3919gp  

p3919fpgp  

  

I d1 8 8

 

 Gz

 I d1

 

 Gz

-x 8 8

 p29 sp11

 G1 G1

 G1 G1

 

    

zggpwg  

   

I d1

 

 Gz

-x  8 8  

pp1111 sp1

 

G1 G1  

   

zggpw5    

I d1 8 8 8 8

 

 Gz

 

G1 G1 G2 G2          

I d1

 

 Gz

zgesgp  

-x -x

 8 8 8 8  pp1122 sp1

    

 I d1

 

 Gz

  

-x

p29 sp11

 

zgesfpgp  

-x -x

 8 8 8 8  pp1122 sp1

G1 G1G2 G2  G1 G1G2 G2

 

       

©2006: Bruker BioSpin , Teodor Parella 24

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

               

 zgcppr

 

       

zgpr       

zggpw5       

 zggpwg

        

p3919gp  

     

10 9 8 7 6 5 4 3 2 1 0 ppm                 

 ©2006: Bruker BioSpin , Teodor Parella 25

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

        

wet   

 1H d1

p11

sp7 sp8 sp9 sp10  

 

Gz

G21 G22 G23 G24  

    

lc2wetdcus lc2wetdc wetdc

  

 1H d1

p11

sp7 sp8 sp9 sp10  

13C GARP

pl14

   GARP

 

Gz

 

G21 G22 G23 G24       

wetdw  

  

 1H d1

p11

sp7 sp8 sp9 sp10  

13C GARP

pl12  

Gz

 

G21 G22 G23 G24              

©2006: Bruker BioSpin , Teodor Parella 26

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

19F SPECIFIC EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 27

H

1H

F

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

   

19F Experiments  

1D spectra:  

1H-decoupled 19F spectrum (zgfhigqn / zgfhigqn.2 | F19CPD) 1H-coupled 19F spectrum (zgflqn | F19) 19F-homodecoupled 19F spectrum (zhflhdqn)

 19F-decoupled 1D 1H spectrum (zghfigqn / zghfigqn30 | PROF19DEC) 1H spectrum with 19F-presaturation (zgf2hfpr)

 2D spectra:

 

2D 19F-1H HETCOR experiment (hfcoqfqn) 2D 19F-1H HOESY experiment (hoesyfhqfqnrv)

 

   

zgfhigqn.2 zgflqn zgfhigqn

p1

 zhflhdqn

p1

 d1

19F

 d1

19F

 d1

19F

 1

CPD

pl12

19F hd

pl24   

 zghfigqn zghfigqn30

 

30º

zgf2hfpr

 

d1 d1 d1 1H 1H

 

 19F  

CPD 19F  

CPD

 19

CW pl12 pl12 pl14

 

    

hfcoqfqn    

H d1

 

 d0 d0 d2

hoesyfhqfqnrv

  

 19F

CPD

pl12  

  d3

1H d1

   19F

d0 d0   

 d8

 CPD

pl12

 

      

©2006: Bruker BioSpin , Teodor Parella 28

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2H SPECIFIC EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 29

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

 • 1D spectra:

 

1D 2H spectrum (zg2h) 1D X-decoupled 2H spectrum (zgig2h, zgig2hf4)

 • 2D spectra:

 Magnitude-mode 2D HETCOR with 2H-decoupling (hxcoqf2h)

 • Miscellaneous:

 High-power 90º 2H decouple pulse calibration (decp902h, decp902hf4)

  

 Related Experiments:

 o Also see: 2H-decoupled 3D triple-resonance experiments

         

 2H

d1

 zg2h  

 p1

 

    

2H d1

zgig2h  

p1

zgig2hf4  

p1

 2H

d1

 

S CPD  

pl12

S CPD  

pl17

 decp902h decp902hf4

 

  

d1 f1 channel I

   

f2 channel 2H

d4

 90º

   

p3

 d1

f1 channel I    f4 channel 2H

 

d4

 90º

   

p23  

 hxcoqf2h

 

  

2H d1 d0 d0 d2  CPD

pl12   

13C d3     

 ©2006: Bruker BioSpin , Teodor Parella 30

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide      

 

BASIC 1D GRADIENTS                                   

©2006: Bruker BioSpin , Teodor Parella 31

G G

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

   

• Standard:  

Gradient-enhanced 1D Echo experiment (zggegp) Gradient-enhanced 1D Spin-Echo experiment (zggpse)

 • Gradient Calibration:

 Gradient Strength Calibration (calibgp) Gradient Preemphasis Adjustament. Gradient Recovery Test (preempgp2)

 • Gradient shimming:

 1D Gradient Echo for gradshim-procedure (imgegp1d) 1D Gradient Echo for gradshim-procedure using 2H (imgegp1d2h) 1D Gradient Echo for gradshim-procedure using selective pulse (imgegpsp1d)

 3D Gradient Echo for gradshim-procedure (imgegp3d) 3D Gradient Echo for gradshim-procedure with BSMS RCB board(imrcbgegp3d)

 

    

 

 

zggegp zggpse   

I () () I () ()

  

Gz G2  

G1

 

Gz

 G1 G2

  

preempgp2   

I d16

  

Gz

 G1

   

imgegp1d calibgp y

  

I d27 I acq/2

 

 acq

z z

 

     

©2006: Bruker BioSpin , Teodor Parella 32

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D COSY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 33

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

   

Phase-cycled:  

Magnitude-mode 2D COSY (cosyqf | COSY45SW / COSY90SW) Magnitude-mode 2D COSY using a 45 pulse (cosyqf45 | COSY45SW) Magnitude-mode 2D COSY using a 90 pulse (cosyqf90 | COSY90SW) Magnitude-mode 2D COSY using purge pulses before d1 (cosyppqf) Phase-sensitive 2D COSY (cosyph)

 Magnitude-mode Long-Range optimized 2D COSY (cosylrqf)

Constant-Time 2D COSY (cosyjdqf)

Phase-cycled and solvent suppression:  

Magnitude-mode 2D COSY with presaturation (cosyprqf) Phase-sensitive 2D COSY with presaturation (cosyphpr | COSYPHPR)

 Gradient-based:

 Magnitude-mode ge-2D COSY (cosygpqf | COSYGPSW) Magnitude-mode ge-2D COSY using purge pulses before d1 (cosygpppqf) Phase-sensitive ge-2D COSY using echo-antiecho (cosyetgp)

 Miscellaneous:

 Phase-sensitive w1-region-selective 2D COSY (scosyph) Phase-sensitive w1-region-selective 2D COSY with refocusing (scosyphrd)

 Phase-sensitive 2D COSY with off-resonance single or multiple presaturation (cosycwphps | COSYCWPHPS)

 Magnitude-mode 2D 13C-13C COSY (cosydcqf) Magnitude-mode long-range optimized 2D 13C-13C COSY (cosydclrqf) Phase-sensitive 2D 13C-13C COSY (cosydcph)

                              

©2006: Bruker BioSpin , Teodor Parella 34

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

JHH

 

H H

   

H H H H  

C C C N C C N C  

    

     

1H d1

cosyph cosyqf

90º º  

d0     

cosyqf45  

cosyqf90  

90º  45º 90º

 90º

 

1H d1 d0

 1H d1 d0

 

   

cosyppqf    

H x y

90º

 d1 d0

45º

 pp1177 pl10

   

     

1H d1

presat pl9

cosyphpr  

cosyprqf p1 p0

d0

     

  

cosylrqf cosyjdqf  

 45º

 

1H d1

d0 d6 d6 1H d1 d0 d6-d0 d18

      

©2006: Bruker BioSpin , Teodor Parella 35

H

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

 cosygpqf cosygpppqf

 

 1H d1 d0

   

Gz

G1 G2

1H x y

pp1177 pl10

Gz

 

d1 d0  

    

G1 G2  

    

cosyetgp  

  

1 d1 d0

  

G1 Gz

G2  

    

scosyph scosyphrd   

 1H d1

90º º selective

d0

 pp1111 sp1

 

  1H d1

90º selective  

  

pp1111 sp1

º

 d20 d0

 

   

cosycwphps cosydcqf cosydcph

 1H

 

 13C

d1 d0  Off-reson. Presat

     CW

pl21

1H

  13C d1

 CPD

pl12

d0

  

 cosydclrqf

 1H

  

13C d1

 CPD

pl12  

d0 d6 d6

    

©2006: Bruker BioSpin , Teodor Parella 36

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D COSY-DQF EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 37

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

• Phase-cycled:  

Magnitude-mode 2D COSY with DQF (cosydfqf) Magnitude-mode 2D COSY with TQF (cosyqftf) Phase-sensitive 2D COSY with DQF (cosydfph | COSYDQFPHSW) Phase-sensitive 2D COSY with TQF (cosyphtf)

 Phase sensitive 2D E.COSY -KcMAX=3 (ecos3nph) Complementary Phase sensitive 2D E.COSY - KcMAX=3 (ecos3cph)

 

 • Phase-cycled and solvent suppression:

 Phase-sensitive 2D COSY with DQF & presaturation (cosydfphpr)

 

 • Gradient-based:

 Magnitude-mode ge-2D COSY with multiple-quantum filter (cosygpmfqf | COSYGPMFSW) Phase-sensitive ge-2D COSY with multiple-quantum filter (cosygpmfph | COSYGPDFPHSW) Phase-sensitive ge-2D COSY with DQF using echo-antiecho (cosydfetgp.1) Phase-sensitive ge-2D COSY with gradient-based DQF using echo-antiecho (cosydfetgp.2)

Gradient E.COSY (ecosygpph)  

 • Gradient-based and solvent supression:

 

Phase-sensitive 2D COSY-DQF with WATERGATE using 3-9-19 (cosydfgpph19) Phase-sensitive 2D COSY-DQF with Excitation Sculpting using 180 water-selective pulse (ES

element) (cosydfesgpph)  

                                    

©2006: Bruker BioSpin , Teodor Parella 38

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

           

JHH

 

H H

   

H H H H  

C C C N C C N C         

cosydfph cosydfqf

cosyphtf cosyqftf

ecos3cph ecos3nph

 

   

1H d1 d0    <l1<l2

<lrec

     

cosydfphpr  

1H d1 d0

presat pl9

      

 ecosygpph

 

  

1H y

 p17

 

Gz

 d1 d0   

 G1

G1       

 ©2006: Bruker BioSpin , Teodor Parella 39

G

1

H

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

 cosygpmfqf cosygpmfph

 

  

1H d1 d0 1H d1 d0  

  

Gz

G1 G2 G3

Gz

G1 G2       

cosydfetgp.1  

cosydfetgp.2   

1H d1 d0  1H d1 d0

 

  

Gz z

G1 G2

G1  

 G2 G3

 

     

cosydfgpph19   

d1 H presat

d0

pl9  

Gz

G1 G2       

cosydfesgpph  

 d1

1 d0 presat pl9

 Gz

 -x -x

   pp1122 sp1

G1 G1G2 G2       

©2006: Bruker BioSpin , Teodor Parella 40

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D SECSY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 41

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

Magnitude-mode 2D SECSY (secsyqf) Magnitude-mode long-range optimized 2D SECSY (secsylrqf)

           

secsyqf  

  

1H d1

90º  

d0

90º  

d0

          

   

1H d1

  90º  

d0

secsylrqf  

90º  d6 d6 d0

                                    

©2006: Bruker BioSpin , Teodor Parella 42

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D RELAYED EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 43

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

      

Magnitude-mode one-step 2D RELAY (cosyqfrl) Magnitude-mode one-step 2D RELAY with incremented mixing times (cosyimqfrl) Magnitude-mode two-step 2D RELAY (cosyqfr2) Magnitude-mode two-step 2D RELAY wit h incremented mixing times (cosyimqfr2) Magnitude-mode three-step 2D RELAY (cosyqfr3)

 

          

JHH

H H

JHH  

H H H H  

C C C N C C N C       

cosyqfrl   

1H d1 d0 d2 d2

        

cosyimqfrl   

1H d1 d0 d2 d20 d2 d20

                     

©2006: Bruker BioSpin , Teodor Parella 44

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

  

JHH

H H

JHH JHH

 

H H H H  

C C C N C C N C     

 cosyqfr2

   

1H d1 d0 d2 d2 d3 d3

        

cosyimqfr2    

1H d1 d0 d2 d20 d2 d20 d3 d21 d3 d21

 

       

 JHH

H H

JHH JHH

 

H H H

JHH

 

H H  

C C C N C C N C       

cosyqfr3  

  

1H d1 d0 d2 d2 d3 d3 d4 d4

         

©2006: Bruker BioSpin , Teodor Parella 45

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

                                                                           

©2006: Bruker BioSpin , Teodor Parella 46

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D TOCSY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 47

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

  

 Phase-cycled

 Phase-sensitive 2D TOCSY using MLEV (mlevph | MLEVPHSW) Phase-sensitive 2D TOCSY using MLEV with purge pulses before d1 (mlevphpp) Phase-sensitive 2D TOCSY using DIPSI-2 (dipsi2ph)

 Phase-cycled and solvent suppression

 Phase-sensitive 2D TOCSY with presaturation using MLEV (mlevphpr | MLEVPHPR ) Phase-sensitive 2D TOCSY with presaturation using MLEV only using first trim pulse (mlevphpr.2 | H2OSUPMLEV) Phase-sensitive 2D TOCSY with presaturation using DIPSI-2 (dipsi2phpr) Phase-sensitive 2D Clean-TOCSY with presaturation using MLEV (clmlevphpr)

 Gradient-based

 Phase-sensitive ge-2D TOCSY with MLEV using echo-antiecho (mlevetgp) Phase-sensitive ge-2D TOCSY with DIPSI-2 using echo-antiecho (dipsi2etgp) Phase-sensitive ge-2D TOCSY with DIPSI-2 using PEP (dipsi2etgpsi)

 Gradient-based and solvent suppression

 Phase-sensitive 2D TOCSY with WATERGATE (3-9-19) using MLEV (mlevgpph19 | MLEVGPPH19SW) Phase-sensitive 2D TOCSY with WATERGATE (3-9-19) using DIPSI-2 (dipsi2gpph19) Phase-sensitive sensitivity-improved 2D TOCSY with WATERGATE (3-9-19) and using DIPSI-2 (dipsi2etgpsi19) Phase-sensitive 2D Adiabatic TOCSY with WATERGATE (3-9-19) using X_M16 sequence (atocsygpph19)

 Phase-sensitive 2D TOCSY with excitation sculpting (W5) using MLEV (mlevgpphw5) Phase-sensitive 2D TOCSY with excitation sculpting (180 water-selective pulse-ES element) using MLEV (mlevesgpph) Phase-sensitive 2D TOCSY with excitation sculpting (180 water-selective pulse-ES element) using DIPSI-2 (dipsi2esgpph)

 

   

Related Experiments:  

o LC-NMR Experiments         

       

©2006: Bruker BioSpin , Teodor Parella 48

d1

I

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

     

JHH

H H

JHH JHH

 

H H H H  

C C C N C C N C  

  

mlevph mlevphpp   

I d1 d0

d9

MLEV-17

p6

 I x y

pp1177

 d1 d0

d9

MLEV-17

p6 pl10 pl10 pl10

 

mlevphpr   

d1 I presat

d0

pl9

d9

MLEV-17

p6 pl10

   

mlevphpr.2   

d1 I presat

d0

pl9

d9

MLEV-17

p6 pl10

  

clmlevphpr  

d9

I d0 presat Clean MLEV-17

pl9 p6 pl10 d20

 dipsi2ph

<1

d9

   <rec

I d1 d0

d20 d21 DIPSI-2 (y)

p6 pl10

  

dipsi2phpr <1

d9 d1

  

 <rec d0

presat pl9

d20DIPSI-2 (y)

d21

 

p6 pl10

    

©2006: Bruker BioSpin , Teodor Parella 49

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

mlevetgp  

 

 I d1

 

 Gz

d9 d0

MLEV-17  

p6 pl10

G1  

G2     

 <1

 I

d1

dipsi2etgp  

d9

d0 d20 DIPSI-2 (y)

p6 pl10

    d21

   <rec

Gz G1

 G2

 

      

<1

dipsi2etgpsi  

 d9

   <rec

I d1

d0 d20 d21 DIPSI-2 (y)

 

p6 pl10

Gz G1  

G2  

 

  

©2006: Bruker BioSpin , Teodor Parella 50

I

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

mlevgpph19   

I d1 d0

 

 Gz

d9

MLEV-17

p6 pl10

 G1 G1

    

dipsi2gpph19  

<1

d9 d1

    d21

  

 <rec

I presat pl9

 

Gz

d0 d20 DDIIPPSSII--22 ((yy))

 p6 pl10

 

G1 G2  

    

atocsygpph19  

  

d1 d0 I presat

d9

X_M16 Adiabatic

pl9 pp2299 sp0

Gz

 

G1 G2      

dipsi2etgpsi19  

 <1

d1 d9

<rec d0

presat d20 d21

DIPSI-2 (y)

pl9 p6 pl10

Gz G1  

G2 G3          

©2006: Bruker BioSpin , Teodor Parella 51

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

      

mlevgpphw5  

  

I d1 d0

 

 Gz

d9

MLEV-17

p6 pl10

 

G1 G1 G2 G2       

mlevesgpph    

I d1 d0

 

 Gz

 d9

MLEV-17

p6 pl10

-x -x    pp1122 sp1

 G1 G1 G2 G2

 

       

dipsi2esgpph  

 d1 d0

I presat pl9

 

Gz

 

 d9

 DIPSI-2 (y)  

p6 pl10

 -x -x

   pp1122 sp1

 G1 G2G3

 G3G4 G4

 

                   

©2006: Bruker BioSpin , Teodor Parella 52

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D ROESY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 53

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0  

 

  

 Phase-cycled:

 Phase-sensitive 2D ROESY (roesyph | ROESYPHSW) Phase-sensitive 2D ROESY using purgue pulses before d1 (roesyphpp) Phase-sensitive 2D T-ROESY (roesyph.2) Phase-sensitive 2D T-ROESY using purgue pulses before d1 (roesyphpp.2) Phase-sensitive 2D ROESY with compensation (croesyph) Phase-sensitive off-resonance 2D ROESY (troesyph)

 Phase-cycled and solvent suppression:

 Phase-sensitive 2D ROESY with presaturation (roesyphpr | ROESYPHPR) Phase-sensitive 2D T-ROESY with presaturation (roesyphpr.2) Phase-sensitive 2D ROESY with compensation and presaturation (croesyphpr) Phase-sensitive off-resonance 2D ROESY with presaturation (troesyphpr)

 Gradient-based:

 Phase-sensitive ge-2D ROESY using echo-antiecho (roesyetgp) Phase-sensitive ge-2D ROESY with T-ROESY using echo-antiecho (roesyetgp.2)

 Gradient-based and solvent suppression:

 Phase-sensitive 2D ROESY with WATERGATE using 3-9-19 (roesygpph19) Phase-sensitive 2D T-ROESY with WATERGATE using 3-9-19 (roesygpph19.2) Phase-sensitive 2D ROESY with excitation sculpting using 180 water-selective pulse (ES element) (roesyesgpph)

 

  

Related Experiments:  

o Selective 1D ROESY Experiments o 2D NOESY Experiments o 2D HSQC-ROESY Experiments

       

 

  

NOE H H

               

©2006: Bruker BioSpin , Teodor Parella 54

1

H H

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

roesyph roesyph.2  

 p25

 

 

H d1 d0

p15 pl11

 

 1H d1

pl27 x x x x x

d0  

CW -x -x -x -x -x T-ROESY

    

roesyphpp roesyphpp.2    

1

x y d1 d0

  p15 pl11

   1

x y d1

 p25 pl27

x x x x x d0

 pp1177 CW pl10

 pp1177 pl10

 -x -x -x -x -x

T-ROESY

  

   

 1H d1 d0

croesyph   p15 pl11

  

 1H d1 d0

troesyph  

 p15 sp10

 

CW off-resonance CW      

roesyphpr  

p15

roesyphpr.2 p25 pl27

1H d1 d0

presat pl9

pl11   CW

 

1H d1

presat pl9

x x x x x d0  

-x -x -x -x -x T-ROESY

     

    

1 d1

H presat

croesyphpr   d0

  p15 pl11

   

1 d1

H presat

troesyphpr   d0

 

 p15 sp10

pl9 CW pl9 off-resonance CW

         

©2006: Bruker BioSpin , Teodor Parella 55

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

        

roesyetgp   

p15 pl11

roesyetgp.2  

p25 pl27

x x x x x 1H d1 d0

 CW

1H d1 d0  

-x -x -x -x -x T-ROESY

Gz G1 Gz G1  

G2 G2       

 roesygpph19

 

   

1H d1 d0

 

 Gz

p15 pl11   CW

 

G1 G1

 roesygpph19.2

 

   

1H d1

 p25 pl27

x x x x x d0

-x -x -x -x -x T-ROESY

Gz

 

G1 G1  

  

roesyesgpph    

1H d1 d0

 

  

Gz

p15 pl11   CW

-x -x     pp1122 sp1

 

G1 G1G2 G2        

©2006: Bruker BioSpin , Teodor Parella 56

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D NOESY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 57

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

   

2D NOESY Experiments  

1D Version:  

1D NOESY with presaturation (noesypr1d) 1D NOESY with presaturation and spoil gradients (noesygppr1d)

 Phase-cycled:

 Phase-sensitive 2D NOESY (noesyph | NOESYPHSW) Phase-sensitive 2D NOESY using purgue pulses before d1 (noesyphpp) Phase-sensitive 2D NOESY using random mixing time (noesyphrv)

 Phase-cycled and solvent suppression:

 Phase-sensitive 2D NOESY with presaturation (noesyphpr | H2OSUPNOESY) Phase-sensitive 2D NOESY with presaturation using random mixing time (noesyphprrv) Phase-sensitive 2D NOESY with 1-1 solvent suppression (noesyph11)

 Gradient-based:

 Phase-sensitive ge-2D NOESY (noesygpph) Phase-sensitive ge-2D NOESY using purgue pulses before d1 (noesygpphpp) Phase-sensitive ge-2D NOESY with z-spoil (noesygpphzs) Phase-sensitive ge-2D NOESY using echo-antiecho (noesyetgp)

 Gradient-based and solvent suppression:

 Phase-sensitive 2D NOESY using jump-and-return and optional 13C and 15N decoupling during acquisition (noesygpphjrrs)

 Phase-sensitive 2D NOESY with WATERGATE: Using

3-9-19 (noesygpph19 | NOESYGPPH19SW) Using water flip-back and 3-9-19 (noesyfpgpph19) Using water flip-back and water-selective 90 pulses (noesyfpgpphwg) Using water flip-back, 3-9-19 and PFG in t1 (noesyfpgpphrs19) Using water flip-back, water-selective 90 pulses and PFG in t1 (noesyfpgpphrswg)

 Phase-sensitive 2D NOESY with excitation sculpting:

Using W5 (noesygpphw5) Using 180 water-selective pulse (ES element) (noesyesgpph)

 Related Experiment:

 Phase-sensitive 2D NOESY with RELAY and DQF (NOESY-RELAY experiment) (noesydfphrl)

 Related Experiments:

 o Selective 1D NOESY o 2D ROESY Experiments o 2D HSQC-NOESY & 2D HMQC-NOESY o 3D NOESY-HSQC & 3D HSQC-NOESY-HSQC o 2D & 3D X-filtered NOESY experiments

    

 ©2006: Bruker BioSpin , Teodor Parella 58

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

    

 noesypr1d

noesygppr1d

 

  

1H d1

presat pl9

 d8

presat

 

presat pl9

Gz

 G1

 

presat  

  

G2

    

NOE H H

 

          

noesyph  

noesyphrv

noesyphpp

  

H d1 d0 d8 H x y d1 d0 d8  

pp1177 pl10

 

  

noesyphpr noesyphprrv

 1H d1 d0

presat pl9

 

d8 presat

       

noesyph11 noesydfphrl  

 1H d1 d0

 

d8 d19  1H d1 d0

 

d8 d4 d4

         

©2006: Bruker BioSpin , Teodor Parella 59

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

   

noesygpph noesygpphpp  

 1H d1 d0

 

 d8

Gz

H x y d1 d0

 pp1177 pl10 d8

Gz

 

G1 G2 G1 G2    

noesyetgp   

 1H d1 d0 d8

  

Gz G1  

G2 G3  

   

noesygpphzs   

 1H d1

p32 sp29

d0

 d8

Gz

 G0 G1

 

   

©2006: Bruker BioSpin , Teodor Parella 60

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

 noesygpph19

 

  

1H d1 d0 d8  

  

Gz

 

G1 G1    

noesyfpgpph19   

 1H d1 d0

pp1111 sp1 -x

 

d8  

Gz

 

G1 G2 G2     

noesyfpgpphrs19   

 1H d1 d0

pp1111 sp1 -x

 d8

 

Gz

 

G1 G2 G2  

     

noesyfpgpphwg noesyfpgpphrswg    

1H d1 d0

 

 Gz

 pp2299 sp11 -x

 d8    

G1 G2

 -y

y y

pp1111 sp1  

  

G2

 

  1H d1 d0

 

 Gz

 pp2299 sp11 -x

 d8    

G1 G2

 

-y

y y

pp1111 sp1  

  

G2

        

 ©2006: Bruker BioSpin , Teodor Parella 61

H

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

        

noesyesgpph    

1H d1 d0

 

  

Gz

-x -x

d8

pp1122 sp1

 

G1 G1 G2 G2       

 noesygpphw5

 

  

1 d1

presat pl9

d0 d8

 

Gz

 

G1 G1 G2 G2  

      

noesygpphjrrs    

1H d1 d0

-x -x  d8 d19 d19*2

 

 13C

15N

Gz

 optional    optional

  p8 sp13

 GARP  

pl12

 GARP  

pl16

 

G1 G2 G2          

©2006: Bruker BioSpin , Teodor Parella 62

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

1D & 2D DOUBLE-QUANTUM EXPERIMENTS

 

                               

©2006: Bruker BioSpin , Teodor Parella 63

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

     

• 1D Double-Quantum (DQ)  

1D Double-Quantum experiments (dqs1d) 1D Multiple Quantum Filter (mqsgp1d | mqsgp1d2)

 • 2D Phase-cycled Double-Quantum (DQ)

 Magnitude-mode 2D Double-Quantum (DQ) (dqsqf) Phase-sensitive Double-Quantum (DQ)(dqsph) Phase-sensitive 2D Double-Quantum (DQ) with presaturation (dqsphpr)

 • 2D Gradient-based Double-Quantum (DQ)

 Phase-sensitive ge-2D Double-quantum using echo-antiecho, 45/135 degree conversion pulse for better sensitivity and remote peak minimisation (dqseagp135) Phase-sensitive ge-2D Double-quantum using echo-antiecho (dqseagp90)

    

Related Experiments:  

o 1D & 2D INADEQUATE  

                                         

©2006: Bruker BioSpin , Teodor Parella 64

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

dqs1d  

  

I d1

º  d4 d4

    

 mqsgp1d mqsgp1d2

   

1H d1 d4 d4 i5 i5 i5 i5 1H d1 d4 d4 i5 i5

  

Gz

 G1 G2

Gz

 G1 G2 G3

      

dqsph dqsqf

 

 dqsphpr

  

  

1H d1

º

 d4 d4 d0

 

 1H

d1

presat pl9

 

 d4 d4 d0

 

        

dqseagp90     rec

dqseagp135   

  rec

1H d1 d4 d4 d0 i5 i5 i5 i5 1H d1 d4 d4 d0 i5 i5 i5 i5  

  

Gz

G1 G1

   

 G3

 

G2 G2

   

Gz

G1 G1

135º   

 G3

 

G2 G2         

©2006: Bruker BioSpin , Teodor Parella 65

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

                                                                           

©2006: Bruker BioSpin , Teodor Parella 66

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D J-RESOLVED EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 67

H

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

   

 • Classical:

 Magnitude-mode 2D J-Resolved (jresqf) Magnitude-mode 2D J-Resolved with f2 decoupling (jresdcqf)

 • With solvent suppression:

 

2D J-Resolved with presaturation (lcjresprqf) 2D J-Resolved with presaturation using shape pulse (lcjrespsqf)

 Also see:

 LC-NMR Experiments

   

 

  

jresqf

jresdcqf

  

1 d1 d0 d0

 13C  

CPD

pl12  

 1H

d1

d0 d0

     

lcjresprqf lcjrespsqf  

 

1H d1

presat pl9

d0 d0  

1H d1 d0 d0

presat off-reson.

                           

 

©2006: Bruker BioSpin , Teodor Parella 68

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

DECOUPLER PULSE CALIBRATION                                   

©2006: Bruker BioSpin , Teodor Parella 69

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

 

 

Calibration of the 90 decoupler pulse (decp90, decp90f3) Calibration of the 90 decoupler shaped pulse (decp90sp)

 Calibration of the 180 decoupler pulse (dec180) Calibration of the shaped 180 decoupler pulse (dec180sp) Calibration of the 180 decoupler pulse using presaturation (dec180pr, dec180f3pr)

   

    

decp90 decp90sp  

   

d1 f1 channel I

   

f2 channel S

d2

 90º

   

p3

 d1

f1 channel I    f2 channel S

d2  

  

90º   

pp1133 sp2

   

decp90f3  

   

d1 f1 channel I

   

f3 channel S

d2

 90º

   

p21                            

©2006: Bruker BioSpin , Teodor Parella 70

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

     

dec180  

   

d1 ff11 cchhaannnneell I

   

f2 channel S

d2 d2  

     

dec180sp  

   

d1 ff11 cchhaannnneell I

   

f2 channel S

d2 d2  

  

180º   

pp1144 sp3

 

   

dec180pr  

  

f1 channel I  

  

f2 channel S

d1

presat pl9

 

d2 d2  

 

     CPD  

pl12  

      

dec180f3pr  

  

f1 channel I d1

presat pl9

 

d21 d21  

 f3 channel S  

CPD

pl16         

©2006: Bruker BioSpin , Teodor Parella 71

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

                                                                           

©2006: Bruker BioSpin , Teodor Parella 72

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

1D DEPT & INEPT EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 73

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0  

 

 

 • DEPT Experiments:

 DEPT (dept) DEPT-45 (dept45 | C13DEPT45) DEPT-90 (dept90 | C13DEPT90) DEPT-135 (dept135 | C13DEPT135) DEPT-45 with adiabatic pulses (deptsp45 / deptsp) DEPT-90 with adiabatic pulses (deptsp90) DEPT-135 with adiabatic pulses (deptsp135) DEPT with composite pulses (deptcp) DEPT-45 with composite pulses (deptcp45) DEPT-90 with composite pulses (deptcp90) DEPT-135 with composite pulses (deptcp135)

 DEPT without 1H-decoupling (deptnd) DEPT++ without 1H-decoupling (deptppnd)

 • INEPT Experiments:

 INEPT without refocusing (ineptnd) Refocused INEPT with decoupling (ineptrd) Refocused INEPT with decoupling using adiabatic pulses (ineptrdsp) INEPT+ without decoupling (ineptpnd)

 Non-refocused 1H-coupled 15N spectrum using INEPT (ineptnd) 1H-decoupled 15N spectrum using INEPT (ineptrd | N15INEPT) Refocused 1H-coupled 15N spectrum using INEPT+ (ineptpnd)

 1D X-relayed H,X-COSY (ineptrl1 / ineptrl2)

 • Other editing experiments:

 Spin-Echo or SEFT (jmod) Conventional APT (apt | C13APT) APT with J-compensation (aptjc)

 Quaternary-carbons with decoupling (quatd) Quaternary-carbons without decoupling (quat)

 

     

 

                 

©2006: Bruker BioSpin , Teodor Parella 74

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

dept º

dept45  

45º  

I d1 d2 d2 d2  CPD I d1 d2

 

d2 d2  CPD

p0 pl12 pl12  

 S S

 

       

I d1

    

S

dept90  

90º

 d2 d2 d2

 

    CPD

pl12

     I d1

    S

 dept135

 

135º

 d2 d2 d2

      CPD

pl12

      

deptsp º

deptsp45 ºº

 

I d1 d2 d2 d2  CPD I d1 d2 d2 d2  

CPD p0 pl12 pl12

 

  

S  

pp1122 sp2

S  

pp1122 sp2

  

deptsp90  

90º

deptsp135  

135º  

I d1 d2 d2 d2  CPD I d1 d2 d2 d2  

CPD

pl12 pl12  

  

S  

pp1122 sp2

S  

pp1122 sp2

       

©2006: Bruker BioSpin , Teodor Parella 75

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

         

I d1

deptcp  

º

 d2 d2 d2

 

    CPD

   

 I d1

 

deptcp45  

45º

 d2 d2 d2

     CPD

p0 pl12 pl12  

 S S

 

       

I d1

    

S

deptcp90  

90º

 d2 d2 d2

 

    CPD

pl12

 deptcp135

 

135º        

S

      CPD

pl12

     

 deptnd

º  

I d1 d2

    

S

d2 d2

p0

     

 deptppnd

 º

 

I d1 d2

    

S

d2 d4

p0

d4 d4 d4

 

       

©2006: Bruker BioSpin , Teodor Parella 76

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

ineptnd  

y

 

I d1 d4 d4  

   

S    

 ineptrd

 y

 

 

I d1 d4 d4  CPD  

pl12  

 

S d3 d3       

ineptrdsp  

y  

 

I d1 d4 d4  CPD

pl12   

S d3 d3  

pp1144 sp3

pp1144 sp3

 

    

ineptpnd  

y

 I d1 d4 d4

 

   

S d3 d3         

©2006: Bruker BioSpin , Teodor Parella 77

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

          

H H H H H  

H 1JCH

C C C C C C C C 1JCC

    

ineptrl1    

I d1  

   

S

d21 d21 d3     

d4 d4

 CPD

pl12

        

 ineptrl2

   

I d1 d21 d21 d3  CPD

pl12

 CPD

pl12   

S d4 d4 d2  

                        

©2006: Bruker BioSpin , Teodor Parella 78

H

H H

C C

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

 jmod

  

CPD CPD

pl12 pl12  

 13C d1 d20 d20

    

apt  

1

CPD  CPD

pl12 pl12  

 13C d1 d20 d20 d21 d21

     

aptjc -x

 1H

CPD

 d4 d4

  CPD

pl12 pl12  

 13C d1 d2 d2

      

quat quatd  

d1 1 d2

CPD

d1 1 d2

CPD

 

 CPD

pl12 pl12 pl12

 13

d2 13

d2  

             

©2006: Bruker BioSpin , Teodor Parella 79

l ....J..

 

Pulse Program Catalogue NMRGuide 4.1 -Topspin 2.0

RUKER IOSPIN

           

DEPT-90 ar •r•at• WI m t'

   

DEPT-135  

CH + CH3  

CH2           

...,. ...........  

160 140 120 100 80 60 40 ppm  

                                       

©2006: Bruker BioSpin , Teodor Parella 80

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D X-DETECTED HETCOR EXPERIMENTS

 

                               

©2006: Bruker BioSpin , Teodor Parella 81

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 

  

• INEPT-Based HETCOR  

o Magnitude-mode 2D HETCOR (hxcoqf | HCCOSW) o Magnitude-mode 2D HETCOR with 2H-decoupling (hxcoqf2h) o Magnitude-mode 2D HETCOR using composite pulses (hxcocpqf) o Magnitude-mode 2D HETCOR with 1H-1H decoupling in F1 using BIRD

(hxcobiqf) o Magnitude-mode 2D HETCOR with 1H-1H decoupling in F1 using BIRD and

composite pulses (hxcobicpqf) o Magnitude-mode 2D HETCOR with refocusing of chemical shifts (hxinepqf) o Phase-sensitive 2D HETCOR with refocusing of chemical shifts (hxinepph)

 • DEPT-based HETCOR

 o Magnitude-mode DEPT-based 2D HETCOR (hxdeptqf) o Phase-sensitive DEPT-based 2D HETCOR (hxdeptph) o Magnitude-mode DEPT-based 2D HETCOR with 1H-1H decoupling in F1

using BIRD (hxdeptbiqf) o Phase-sensitive DEPT-based 2D HETCOR with 1H-1H decoupling in F1 using

BIRD (hxdeptbiph)  

o Phase-sensitive DEPT-based TOCSY-HETCOR experiment (hxdeptmlph)

 • 2D H-relayed HETCOR experiment

 o Magnitude-mode 2D H-relayed HETCOR (hhxcoqf / hhxcoqf.2)

 • 2D X-relayed HETCOR experiment

 o Magnitude-mode 2D X-relayed HETCOR (hxxcoqf)

    

Related Experiments:

 • 2D HMQC • 2D HSQC

      

                 

©2006: Bruker BioSpin , Teodor Parella 82

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 1JCH

 

H H

 

  

H H H H  

C C C N C C N C     

hxcoqf hxcocpqf   

1H d1 d0 d0 d2  CPD

 1H d1

 

d0 d0 d2  CPD

pl12 pl12   

13C d3 13C d3     

hxcobiqf  

 1H d1 d0 d2 d2 d0 d2  

CPD  

pl12   

13C d3  

   

hxcobicpqf  

 1H d1 d0 d2 d2 d0 d2  

CPD

pl12   

13C d3  

    

hxinepqf hxinepph

  

1H d1 d0 d0 d4 d4  CPD

pl12   

13C d3 d3

     

©2006: Bruker BioSpin , Teodor Parella 83

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

   

JHH  

H H H H H

   

H 1JCH

C C C N C C N C  

  

hhxcoqf  

  

1H d1

   

13C

d0 d20 d4 d20    

 d4 d3

 CPD

pl12

    

hhxcoqf.2  

  

1H d1

   

13C

d0 d20 d20 d2    

 d3

 CPD

pl12

 

         

H H H H H H 1JCH

C C C N C C N C 1JCC

 

  

hxxcoqf   

1H d1 d0 d0 d2 d3  CPD

pl12

 CPD

pl12   

13C d4 d4 d2  

      

©2006: Bruker BioSpin , Teodor Parella 84

 d1

 

E d9

d2  CPD

d0 d0 MLEV-17

d2

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

  

1JCH  

H H

 

  

H H H H  

C C C N C C N C    

hxdeptph hxdeptqf

º  

1H d1 d2 d2 d0 d0  CPD

pl12   

13C d2      

hxdeptbiph hxdeptbiqf

º  

1H d1 d0 d2 d2 d0 d2 d2  CPD

pl12   

13C d2  

       

JHH

H H

JHH JHH  

H H H H  

C C C N C C N C   

 hxdeptmlph

   

1H  

p6 pl10

 

  º  

   

pl12

 13C d2

     

©2006: Bruker BioSpin , Teodor Parella 85

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

                                                                           

©2006: Bruker BioSpin , Teodor Parella 86

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D COLOC EXPERIMENT                                   

©2006: Bruker BioSpin , Teodor Parella 87

 Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

 

 

• Magnitude-mode 2D COLOC (colocqf | HCCOLOCSW)

Related Experiments:

• 2D HETCOR • 2D HMBC

 

  

 

       

H H H H H H  

C C C N C C N C  

3JCH

 

2JCH   

 colocqf

 

 1H d1

   

13C

d0 d6-d0

d6

 CPD

pl12

                              

©2006: Bruker BioSpin , Teodor Parella 88

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HETERONUCLEAR J-RESOLVED EXPERIMENT

 

                               

©2006: Bruker BioSpin , Teodor Parella 89

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

 Magnitude-mode 2D Heteronuclear J-Resolved (hjresqf)

      

 hjresqf

 1H

 

   

13C

 CPD

pl12  

  d1

 CPD  

pl12

 d0

                                                

©2006: Bruker BioSpin , Teodor Parella 90

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HOESY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 91

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

Magnitude-mode 2D 1H-13C HOESY(hoesyqfrv) Phase-sensitive 2D 1H-X HOESY (hoesyph)

 

 

Also see 19F experiments (hoesyfhqfqnrv)

        

H NOE  

C            

hoesyqfrv  

 

I d1

  

S

d0 d0   

 d8

 CPD

pl12

       

hoesyph   

I d1 c d0 d0

  

S d8

 CPD

pl12

              

©2006: Bruker BioSpin , Teodor Parella 92

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

1D & 2D INADEQUATE EXPERIMENTS

 

                               

©2006: Bruker BioSpin , Teodor Parella 93

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

  

• 1D INADEQUATE  

1D INADEQUATE without refocusing (inad1d) 1D INADEQUATE using composite pulses ( inadcp1d) 1D INADEQUATE with refocusing ( inadrd1d) 1D INADEQUATE using initial INEPT ( inepin)

 • 2D INADEQUATE

 Magnitude-mode 2D INADEQUATE (inadqf/ inadqf.2 | INAD) Phase sensitive 2D INADEQUATE( inadph) Magnitude-mode symmetric 2D INADEQUATE( inadqfsy)

   

 Also see 1D & 2D DQ Experiments

 

   

                                            

©2006: Bruker BioSpin , Teodor Parella 94

H

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

     

H H H H H H  

C C C N C C N C 1JCC

   

inad1d inadrd1d  

1H CPD 1

CPD   

13C d1

pl12 pl12

 d4 d4 13C d1 d4 d4 d4 d4

      

inadcp1d   

1H CPD pl12

 13C d1

 

d4 d4  

       

H H H H H H 1JCH

C C C N C C N C 1JCC

 

inepin    

I d1 d21 d21 d3  CPD

pl12

 Also see ineptrl1

  

S d4 d4          

©2006: Bruker BioSpin , Teodor Parella 95

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

H H H H H H  

C C C N C C N C 1JCC

         

1H

 

 13C d1

inadqf.2 inadph inadqf

 CPD

pl12  

 d4 d4 d0

        

inadqfsy  

 1H

 

 13C d1

 CPD

pl12  

 d4 d4 d0 d0

 

                              

©2006: Bruker BioSpin , Teodor Parella 96

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

1D INVERSE EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 97

C d1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 

  

• Phase-Cycled:  

1D inverse DEPT with refocusing and no decoupling ( ideptnd) 1D inverse INEPT without refocusing and without decoupling ( iineptnd) 1D inverse INEPT with refocusing and decoupling ( iineptrd)

 1D HMQC with refocusing but not decoupling (hmqcndrd1d | HMQC1D) 1D HMQC without refocusing and without decoupling (inv3nd1d/ hmqcnd1d) 1D HMQC with refocusing and decoupling (hmqcrd1d) 1D HMQC using BIRD without refocusing and without decoupling ( hmqcbind1d) 1D HMQC using BIRD with refocusing and without decoupling (hmqcbindrd1d) 1D HMQC using BIRD with refocusing and decoupling (hmqcbird1d)

 1D DEPT-HMQC with refocusing and decoupling (indecord1d) 1D DEPT-HMQC using BIRD with refocusing and decoupling (indecobird1d)

 • Gradient-based:

 

ge-1D HMQC with refocusing but not decoupling (hmqcgpnd1d) ge-1D HSQC with refocusing and no decoupling (hsqcgpnd1d)

  

Any 2D or 3D pulse sequence can be used for 1D acquisition (mc commands)

   

 iineptnd iineptrd

   

1H 1H d4 d4

  

 13C d1

13 d20 d20

 d20

 d20  

GARP  

pl12  

  

ideptnd   

º  

1H d2 d2 d2

  

 13C d1

 

         

©2006: Bruker BioSpin , Teodor Parella 98

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

 hmqcnd1d

   

1H d1 d2

<lrec

 

<ll  

X         

1H d1

hmqcndrd1d    d2 d2

    <lrec

    1H d1

 hmqcrd1d  

 d2 d2

 

   <lrec

 <ll

 X

 

 X GARP

pl12   

hmqcbind1d    

1H d1

 -x

 d2 d2 d7 d2

  <lrec

 <ll

 

X   

hmqcbindrd1d  

-x  

1H d1

 d2 d2 d7

 d2 d2

 <lrec

 

<ll  

X    

hmqcbird1d  

-x  

1H d1

 

d2 d2 d7  

d2 d2 <lrec

 <ll

 

X GARP

pl12       

©2006: Bruker BioSpin , Teodor Parella 99

   

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

   

indecord1d   

 1H d1 d2

º  d2 d2 d2

   

X GARP

pl12    

 indecobird1d

 

  

1H d1

 

 d2 d2 d7 d2

º  d2 d2 d2

    

GARP

pl12   

hmqcgpnd1d    

1H d1 d2

<lrec d2

 

<l1

 X

 

 

Gz

 G1 G2 G3

 

   

hsqcgpnd1d    

1H d1

 y

 

 d4 d4 d4 d4

 

 <lrec

 

<l1

 X

  

Gz

 

G1 G2 G3       

©2006: Bruker BioSpin , Teodor Parella 100

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HMQC EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 101

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0  

    

Phase-cycled:  

Magnitude-mode 2D HMQC (hmqcqf | HMQC) Magnitude-mode 2D HMQC without decoupling (hmqcndqf) Magnitude-mode 2D HMQC using BIRD (hmqcbiqf | HMQCBI) Magnitude-mode 2D HMQC using BIRD without decoupling (hmqcbindqf) Phase-sensitive 2D HMQC (hmqcph | HMQCPH) Phase-sensitive 2D HMQC without decoupling (hmqcndph) Phase-sensitive 2D HMQC using BIRD (hmqcbiph | HMQCBIPH) Phase-sensitive 2D HMQC using BIRD without decoupling (hmqcbindph)

 Phase-cycled and solvent suppression

 From f2 channel: Phase-sensitive 2D HMQC with presaturation (hmqcphpr | HMQCPHPR) Phase-sensitive 2D HMQC using BIRD and presaturation (hmqcbiphpr) / hmqcbiphpr2) Phase-sensitive 2D HMQC with 1-1 water suppression (hmqcph11)

 From f3 channel: Phase-sensitive 2D 1H-15N HMQC (hmqcf3ph) Phase-sensitive 2D 1H-15N HMQC using presaturation (hmqcf3phpr) Phase-sensitive 2D 1H-15N HMQC using BIRD (hmqcbif3ph) Phase-sensitive 2D 1H-15N HMQC using decoupling in a third f2 channel (hmqcfbph)

 Gradient-based:

 From f2 channel: Magnitude-mode ge-2D HMQC (hmqcgpqf | HMQCGP) Phase-sensitive ge-2D HMQC using z-filter (hmqcgpph) Phase-sensitive ge-2D HMQC using echo-antiecho (hmqcetgp) Phase-sensitive ge-2D HMQC using echo-antiecho with adiabatic refocusing (hmqcetgp.2) Phase-sensitive ge-2D HMQC using PEP (hmqcetgpsi) Phase-sensitive ge-2D HMQC using PEP and shorter overall timing (hmqcetgpsi.2)

 From f3 channel: Phase-sensitive ge-2D 1H-15N HMQC using echo-antiecho (hmqcetf3gp) Phase-sensitive ge-2D 1H-15N HMQC using PEP (hmqcetf3gpsi) Phase-sensitive ge-2D 1H-15N HMQC using PEP and shorter overall timing( hmqcetf3gpsi.2)

 Gradient-based and solvent suppression

 

Phase-sensitive ge-2D 1H-15N HMQC using WATERGATE (3-9-19) (hmqcf3gpph19)

 

     

     

©2006: Bruker BioSpin , Teodor Parella 102

H d2

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

1JCH  

H H

 

  

H H H H  

C C C N C C N C  

   

hmqcqf hmqcph

  

1H d1

 d2 d2

<lrec

   

X d0 d0  GARP pl12

   

hmqcndph hmqcndqf

  

1H d1

 d2 d2

<lrec

 <ll

 

X d0 d0

   

 hmqcphpr

 d1

1 d2 presat pl9

<lrec

<ll  

d0 d0 X

 GARP

pl12    

hmqcph11  

-x -x

    <lrec

1H d1 d19 d2 d19*2 d2

 <ll

 

X d0 d0  

GARP

pl12   

 ©2006: Bruker BioSpin , Teodor Parella 103

H

H

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

     

hmqcbiph hmqcbiqf

 

  

1H d1

 -x

 d2 d2 d7

 

  d2 d2

 

 <lrec

 

<ll  

X d0 d0  

GARP pl12

   

hmqcbindph

hmqcbindqf -x

     <lrec

1H d1

d2 d2 d7 d2 d2

 

<ll  

X d0 d0

    

hmqcbiphpr  

   

d1 1

presat pl9

-x  d2 d2 d7

presat pl9

  d2 d2  

 <ll

 

 <lrec

 

X d0 d0  

GARP pl12

 hmqcbiphpr2

 -x

 d1

1

presat pl9

 d2 d2 d7

 

   <ll

 d2 d2  

 <ll

 <lrec

 

X d0 d0  

GARP pl12

         

 ©2006: Bruker BioSpin , Teodor Parella 104

H d2

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

   

1JNH

H H H H H H  

C C C N C C N C  

   

hmqcf3ph   

1H d1 d2 d2 <lrec

 <ll

 

X d0 d0  GARP  

pl16  

 hmqcf3phpr

  

d1 1 d2

presat pl9

<lrec

<ll  

d0 d0 X

 GARP

pl16  

 hmqcbif3ph

 

-x

  

 <lrec

1H

d1

d2 d2 d7 d2 d2

 

<ll  

X d0 d0  

GARP pl16

  

 hmqcfbph

   

1H d1

 d2 d2

<lrec

   

15N

  

13C

<ll   d0 d0   

 GARP

pl12

   GARP  

pl16

 

   

©2006: Bruker BioSpin , Teodor Parella 105

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

hmqcgpqf  

  

1H d1 d2 8 8 d2

<lrec

 <l1

 d0 d0

X   

Gz

 GARP

pl12

 G1 G2 G3

     

hmqcgpph  

 

 1H d1

 d4 d4

<lrec d2

 <l1

 

d0 d0 8 X

  

Gz

G1

d4 d4  

    

G2

 GARP

pl12   G3

 

        

hmqcf3gpph19   

  

1H d1

   d26

y  

 d26

   d26 d26

 <lrec

 

  

15N

 

 Gz

<l1   d0 d0

        G1 G1

   GARP

pl16

        

©2006: Bruker BioSpin , Teodor Parella 106

d1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

         

 hmqcetgp

 

   

1H d1 d2

d2 <lrec

 

 

 13C

  

15N

 

      optional

<l1   

 pp1144 sp3

  d0 d0

8 8

  

 GARP

pl12

 

Gz

 G2

 G1 G1

         

 hmqcetgp.2

 

 1H d2 d2 <lrec

  

 13C

 

 Gz

<l1   

 pp1144 sp3

  d0 d0

 

  8 8  pp2244 sp7

  

 GARP

pl12

 G2

 G1 G1

               

 ©2006: Bruker BioSpin , Teodor Parella 107

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

          

hmqcetgpsi    

1H d1 d2

y  d2 d2 d2 8 8

 

 <lrec

   

13C

  

15N optional

<l1   

 pp1144 sp3

y

 d0 d0

8 8

  

 GARP

pl12

 Gz

 

G2  

G1 G1  

      

hmqcetgpsi.2    

1H d1

y  d4 d4 d4 d4 d4 d4 8 8

 <lrec

   

13C

   

 pp1144

<l1   d0 d0

8 8

y   

 pp1144

   GARP pl12

15N optional sp3

sp3

 Gz

 

G2  

G1 G1                  

©2006: Bruker BioSpin , Teodor Parella 108

p14p14

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

hmqcetf3gp  

   

1H d1  d21 d21

<lrec

   

15N

  

13C optional

<l1

 8

  d0 d0 8    

8 8

   GARP pl16

 

pp1144 Gz

sp3   

 G1 G1

G2  G1 G1

 

  

hmqcetf3gpsi  

  

1H d1

   d21

   d21

   d21

 y

 d21 8 8

  <lrec

  

 15N

  

13C optional  

Gz

<l1

 8

y

d0 d0 8

  

8 8  

pp1144 sp3

  

 GARP

pl16

  

 G1 G1

G2  

G1 G1     

hmqcetf3gpsi.2  

  

1H d1

 

 d26 d26

 

 d26

 

 d26

y

 d26 d26 8 8

 <lrec

  

 15N

<l1  

8

y

d0 d0 8

  

 GARP pl16

 13C optional 8 8

 

pp1144 Gz

sp3   

 G1 G1

G2  

G1 G1    

 ©2006: Bruker BioSpin , Teodor Parella 109

0

 

Pulse Program Catalogue NMRGuide 4.1 -Topspin 2.0

RUKER IOSPIN

 

          

IIJUU  

 _.HI

 

; 0

.t 'I - so

i 60  

70

I M

 qo

 

 l Oll

 1111

I

·' J.O

  

K.O

Ufl  

1. 7(.1 ti_c; 6.0 _:; :;;.o -&5 -& H J.:- J.O 2.5 Z.O 1.5 1.0 ppm                                   

 ©2006: Bruker BioSpin , Teodor Parella 110

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D DEPT-HMQC EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 111

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

    

Phase-sensitive 2D DEPT-HMQC (indecoph) Phase-sensitive 2D DEPT-HMQC using BIRD (indecobiph) Phase-sensitive 2D DEPT-HMQC-TOCSY using BIRD ( indecobimlph)

      

indecoph   

 1H d1 d2

º  d2 d2 d2

   

X d0 d0  GARP

pl12     

indecobiph    

1H d1

 

 d2 d2 d7 d2

º  d2 d2 d2

   

X d0 d0  GARP  

pl12      

indecobimlph   

 1H d1

   

X

 

 d2 d2 d7 d2

º  d2 d2

       d0 d0

 

 d9

d2 MLEV-17

 

p6 pl10

        GARP

pl12               

©2006: Bruker BioSpin , Teodor Parella 112

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HSQC EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 113

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

FROM F2 CHANNEL     

• Phase-cycled:  

Phase-sensitive 2D HSQC (hsqcph)  

 

• Phase-cycled and solvent suppression:  

Phase-sensitive 2D HSQC with presaturation (hsqcphpr) Phase-sensitive 2D HSQC with off-resonance presaturation (hsqcphps)

 

 • Gradient-based:

 Phase-sensitive ge-2D HSQC using z-filter and selection before t1 (hsqcgpph | HSQCGP) Phase-sensitive ge-2D HSQC using z-filter and selection after t1 (hsqcgpph2) Phase-sensitive ge-2D HSQC using echo-antiecho (hsqcetgp | HSQCETGP) Phase-sensitive ge-2D HSQC using echo-antiecho and adiabatic pulses for inversion (hsqcetgpsp) Phase-sensitive ge-2D HSQC using echo-antiecho and adiabatic pulses for inversion and refocusing(hsqcetgpsp.2) Phase-sensitive ge-2D HSQC using echo-antiecho and adiabatic pulses for inversion and refocusing and BS effects(hsqcetgpsp.3) Phase-sensitive ge-2D HSQC using PEP (hsqcetgpsi) Phase-sensitive ge-2D HSQC using PEP with gradients in back-inept (hsqcetgpsi2) Phase-sensitive ge-2D HSQC using PEP and adiabatic pulses for inversion(hsqcetgpsisp | HSQCETGPSISP) Phase-sensitive ge-2D HSQC using PEP and adiabatic pulses for inversion with gradients in back-inept (hsqcetgpsisp2) Phase-sensitive ge-2D HSQC using PEP and adiabatic pulses for inversion and refocusing (hsqcetgpsisp.2 | HSQCETGPSISP.2) Phase-sensitive ge-2D HSQC using PEP and adiabatic pulses for inversion and refocusing with gradients in back-inept (hsqcetgpsisp2.2)

ge-2D 1H-X HSQC experiment with X-Y-decoupling during acquisition and with selective Cb/C=O decoupling. (hsqcdhetgpsp)

         

              

©2006: Bruker BioSpin , Teodor Parella 114

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

      

FROM F3 CHANNEL  

   

• Phase-cycled:  

Phase-sensitive 2D 1H-15N HSQC (hsqcf3ph)  

 • Phase-cycled and solvent suppression:

 Phase-sensitive 2D 1H-15N HSQC using presaturation (hsqcf3phpr)

 

 

• Gradient-based:  

Phase-sensitive ge-2D 1H-15N HSQC using echo-antiecho (hsqcetf3gp | HSQCETF3GP) Phase-sensitive ge-2D 1H-15N HSQC using PEP (hsqcetf3gpsi | HSQCETF3GPSI) Phase-sensitive ge-2D 1H-15N HSQC using PEP with gradients in back-inept (hsqcetf3gpsi2)

Phase-sensitive ge-2D 1H-15N HSQC using XY16-CPMG(hsqcetf3gpxy, hsqcetf3gpxy.2)

 

 • Gradient-based and solvent suppression

 Phase-sensitive ge-2D 1H-15N HSQC using water flip-back and echo-antiecho (hsqcetfpf3gp | HSQCETFPF3GP) Phase-sensitive ge-2D 1H-15N HSQC using water flip-back and PEP (hsqcetfpf3gpsi | HSQCETFPF3GPSI) Phase-sensitive ge-2D 1H-15N HSQC using water flip-back and PEP with gradients in back-inept (hsqcetfpf3gpsi2)

 Phase-sensitive ge-2D 1H-15N HSQC using WATERGATE (3-9-19) (hsqcf3gpph19) Fast-HSQC, Phase-sensitive ge-2D 1H-15N HSQC using WATERGATE (3-9-19) (fhsqcf3gpph | FHSQCF3GPPH) Phase-sensitive ge-2D 1H-15N HSQC using water flip-back and WATERGATE (selective pulse) (hsqcfpf3gpphwg | HSQCFPF3GPPHWG)

                       

©2006: Bruker BioSpin , Teodor Parella 115

1

H

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

hsqcph  

  

1H d1 d4

y  d4 d4 d4

 

 <rec

 

<1  

d0 d0 X

  GARP  

pl12  

hsqcf3ph  

  

1H d1

  d26

y  d26 d26 d26

 

 <rec

 <1

 d0 d0

X

  GARP

 pl12

 

  

hsqcphpr    

d1

H presat pl9

y  d4 d4 d4 d4  

 <1

 

 <rec

 d0 d0

X

  GARP  pl12

  

hsqcf3phpr   

 1 d1

presat pl9

 

 d26

y

 d26 d26 d26  

 <1

 

 <rec

 d0 d0

X

  GARP  pl12

 

  

hsqcphps    

d1

H presat off-reson.

y  d4 d4 d4 d4  

 <1

 

 <rec

 d0 d0

X

  GARP  

pl12   

©2006: Bruker BioSpin , Teodor Parella 116

1

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

   

1JCH  

H H

 

  

H H H H  

C C C N C C N C    

hsqcgpph  

y

 

  <rec

H d1 d4  

d4 d4 d4

 <1

 

X d0 d0

  

Gz

   GARP  

pl12

 

G1 G2 G3  

 hsqcgpph2

y  

H d1 d4 d4 d4 d4

  <rec

 <1

 

X d0 d0

  

Gz

   GARP

pl12

 G1 G2 G3

 

     

ppm   

20  

 40

 

 60

 

 80

 

 100

 

 120

 

 140

 10 9 8 7 6 5 4 3 2 1 ppm

 ©2006: Bruker BioSpin , Teodor Parella 117

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

hsqcetgp  

 

 1H d1

y  

d4 d4 p28 d4 d4

 

 <rec

 

  

13C

 

 15N

 

      optional

<1  

d0 d0

   GARP

pl12

 

Gz

 

G2 G1

  

 y

 p28

hsqcetgpsp    <rec

1H d1

d4 d4 d4 d4

 

  

13C

     pp1144

 <1  

d0 d0

     pp1144

    GARP

 15N  

optional sp3 sp3

pl12

 

Gz

 G2

G1  

 hsqcetgpsp.2

  

 1H

d1

y  

d4 d4 p28 d4 d4

 

 <rec

 

  

13C

 

 15N

       optional

     pp1144 sp3

 <1  

d0 d0

    

 pp2244 sp7

     pp1144 sp3

 

   GARP

pl12

 

Gz

 

G2

G1  

      

©2006: Bruker BioSpin , Teodor Parella 118

/

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

             

1H d1

    d4 d4

 

 y

 p28

hsqcetgpsp.3     d4 d4

   <rec

   

13C  

15N

Gz

 

      optional

 

    pp1144 sp3

<1  

d0 d0

 

    pp1144 sp3

   

 pp1144 sp3

 

    pp1144 sp3

   GARP

pl12

 

G2 G1

     

 hsqcdhetgpsp

  

 1H d1

y  

d4 d4 p28 d4 d4

 

 <rec

 

  

13Ca  

 13C /13CO

 

    pp1144 sp3

<1  

d0 d0

 

    pp1144 sp9

   

 pp1144 sp3

   GARP

pl12

 

p5m4sp180.p31

Gz pl13

 

G1 G2 G3                     

 ©2006: Bruker BioSpin , Teodor Parella 119

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

 hsqcetgpsi

  

 1H

d1

y y  

d4 d4 p28 d24 d24

 

  d4 d4

 <rec

 <1 'I'

  

13C

 

 15N

     optional

d0 d0  GARP

pl12

  

Gz

 

G2 G1

 

  

hsqcetgpsi2  

y y <rec

1H d1  

d4 d4 p28  d24 d24

 d4 d4

   

13C

 

 15N

 

      optional

<1

 d0 d0

'I'    GARP

pl12

  

Gz

 

G3 G3 G4 G4 G2 G1

   

hsqcetgpsisp  

y y <rec

1H d1  

d4 d4 p28  d24 d24

 d4 d4

   

13C

 

    pp1144

<1

 d0 d0

'I'  

    pp1144

   GARP

 15N

 

 optional

sp3 sp3 pl12

  

Gz

 

G2 G1

   

©2006: Bruker BioSpin , Teodor Parella 120

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

   

hsqcetgpsisp2  

y y <rec

1H d1

 

d4 d4 p28  d24 d24

 d4 d4

  

 13C

 

 15N

       optional

 

    pp1144 sp3

<1

 d0 d0

'I'  

    pp1144 sp3

   GARP

pl12

  

Gz

 G3 G3 G4 G4 G2

G1  

    

hsqcetgpsisp.2  

y y <rec

1H d1  

d4 d4 p28  d24 d24

 d4 d4

   

13C

 

 15N

 

    pp1144 sp3

<1

 d0 d0

 

    pp2244 sp7

 

    pp2244 sp7

'I'  

    pp1144 sp3

   GARP  pl12

  

Gz

 

G2 G1

    

hsqcetgpsisp2.2    

H d1

 

 d4 d4

y y  p28

d24 d24

 

  d4 d4

 <rec

 <1 'I'

 13C

   

Gz

  

 pp1144 sp3

 d0 d0

  

 pp2244 sp7

 

   pp2244 sp7

  

 pp1144 sp3

  GARP

pl12

 G3 G3 G4 G4 G2

G1     

©2006: Bruker BioSpin , Teodor Parella 121

H

G

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

1JNH

H H H H H H  

C C C N C C N C   

 hsqcetf3gp

   

1 d1 d26

 

  d26

y  p28

 

  d26 d26

 

 <rec

  

 15N

  

13C

 

      optional

<1  

d0 d0

   GARP

pl16

 pp1144

z sp3  

G1 G3 G2

                

10 9 8 7 6 5 4 3 2 1 0 ppm  

ppm 102

 104

 106

 108

 110

 112

 114

 116

 118

 120

 122

 124

 126

 128

 10.0 9.5 9.0 8.5 8.0 7.5 7.0 6.5 6.0 ppm

 ©2006: Bruker BioSpin , Teodor Parella 122

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

  

hsqcetf3gpsi    

1H d1

   d26

 y y

 

d26 p28 d24 d24 d26 d26

 

 <rec

 

  

15N  

  

13C  

  

Gz

       optional

<1

 d0 d0

     

pp1144 sp3

'I'    GARP

pl16

G1 G3 G2

 

      

hsqcetf3gpsi2  

y y <rec

1H d1  

d26  

d26 p28  

d24 d24 d26 d26

 

<1 'I'  

15N  

  

13C

 

     optional

 d0 d0      pp1144 sp3

  GARP

pl16

Gz  

G1 G4 G4 G2

 

 G5 G5 G3

  

 

in doubly-labeled proteins  

zgoptns -DLABEL_CN in eda  

ppm ppm  

119 119

 120 120

 121 121

 122 122

 123 123

 124 124

 125 125

 8.8

 8.6

 8.4

 8.2

 8.0

 ppm

 8.8

 8.6

 8.4

 8.2

 8.0

 7.8

 ppm

  

©2006: Bruker BioSpin , Teodor Parella 123

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

        

hsqcetfpf3gpsi   

  

1H d1

 

  d26

y y

 d26 d24 d24 d26 d26

 <rec

 

  

15N

13C

Gz

      

 optional

 <1

 d0 d0

     

p8 sp13

 'I'

    GARP

pl16

 G1 G3

G2  

       

hsqcetfpf3gpsi2    

1H d1

 

  d26

y y

 d26 d24 d24 d26 d26

 <rec

 

<1 'I'  

15N  

  

13C

    

 optional

 d0 d0      

p8 sp13

  GARP

pl16

Gz

 

G1 G4 G4 G2

G5 G5 G3

                  

©2006: Bruker BioSpin , Teodor Parella 124

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

fhsqcf3gpph   

  

1H d1

   d26

y  

 d26

-x  

 d26 d26

  <rec

 

  

15N

 

 13C

 

      optional

<1  

d0 d0

   GARP  

pl16

  

Gz

 G1 G1 G2

 pp1144 sp3

   

 G2 G3 G3

 

  

   

H d1

    d26

    d26

 

 y

 p28

hsqcf3gpph19     d26 d26

  <rec

   

15N   

Gz

<1  

d0 d0

   GARP  

pl16

 

G1 G2 G3  

hsqcetfpf3gp y

 -x

G3  

   d26 d26

     <rec

1H  

  

15N

  

13C

d1  

       optional

d26 d26   pp1111 sp1

 

 <1  

d0 d0

-x  p29 sp11

-x  

    

GARP  

pl16

 

p8 Gz sp13

 G1 G3

G2

 G4 G5

 

hsqcfpf3gpphwg y

 -x

 

   d26 d26

 

   <rec

1H d1  

15N

Gz

d26 d26   pp1111 sp1

 

  <1

 d0 d0

-x  p29 sp11

-x  

    

GARP

pl16

 G1 G2 G3 G3

 

©2006: Bruker BioSpin , Teodor Parella 125

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

            

 hsqcetf3gpxy

 

 

xy16 y xy16  

 <rec

1H d1 d26 d26 d26 d26

 

xy16 <1 xy16  

15N

  

13C

     optional

 d0 d0

 loop loop

  GARP

pl16

 

pp1144 Gz sp3

 

G1 G3 G2

     

hsqcetf3gpxy.2  

 

xy16 y xy16  

 <rec

1H d1 d26 d26 d26 d26  

xy16 <1 xy16  

15N

  

13C

     optional

 d0 d0

 loop loop

  GARP

pl16

 

pp1144 Gz sp3

 G1 G1 G3

 

G2 G2               

©2006: Bruker BioSpin , Teodor Parella 126

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D MULTIPLICITY-EDITED HSQC EXPERIMENTS

 

                               

©2006: Bruker BioSpin , Teodor Parella 127

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

   

 

   

Gradient-enhanced form f2 channel  

Phase-sensitive ge-2D multiplicity-edited HSQC using z-filter (hsqcedgpph | HSQCEDGPPH) Phase-sensitive ge-2D multiplicity-edited HSQC using echo-antiecho (hsqcedetgp | HSQCEDETGP) Phase-sensitive ge-2D multiplicity-edited HSQC using echo-antiecho and adiabatic pulses (hsqcedetgpsp) Phase-sensitive ge-2D multiplicity-edited HSQC using echo-antiecho and inversion and matched sweep adiabatic pulses (hsqcedetgpsp.3) Phase-sensitive ge-2D multiplicity-edited HSQC using PEP and adiabatic inversion pulses (hsqcedetgpsisp) Phase-sensitive ge-2D multiplicity-edited HSQC using PEP and adiabatic inversion and refocusing pulses (hsqcedetgpsisp.2) Phase-sensitive ge-2D multiplicity-edited HSQC using PEP and adiabatic inversion pulses with gradients in back-inept (hsqcedetgpsisp2) Phase-sensitive ge-2D multiplicity-edited HSQC using PEP and adiabatic inversion and refocusing pulses with gradients in back-inept (hsqcedetgpsisp2.2) Phase-sensitive ge-2D multiplicity-edited HSQC using PEP and inversion, refocusing and matched sweep adiabatic pulses with gradients in back-inept (hsqcedetgpsisp2.3)

 Gradient-enhanced form f3 channel

 

Phase-sensitive ge-2D 1H-15N HSQC-edited using PEP (hsqcedetf3gpsi) Phase-sensitive ge-2D 1H-15N HSQC-edited using PEP with gradients in back-inept (hsqcedetf3gpsi2)

     

 

       

   

1H d1

 y

 d4 d4

hsqcedgpph  

   d4 d4

  <lrec

 

<l1  

d0 d0 X

  

Gz

d21 d21  GARP

pl12

 

G1 G2 G3          

 ©2006: Bruker BioSpin , Teodor Parella 128

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

1H d1

    d4 d4

  

y  p28

hsqcedetgp     d4 d4

 

  <lrec

   

13C

 

 15N

 

       optional

 <l1

  d0 d0

 

  d21 d21

    GARP

pl12

  

Gz

 

G2  

G1     

y  

p28

hsqcedetgpsp  

  <lrec

1H d1

d4 d4 d4 d4

   

13C

 

 15N

 

       optional

     pp1144 sp3

 <l1

  d0 d0

 

  d21 d21

     pp1144 sp3

 

   GARP

pl12

  

Gz

 

G2  

G1

   

y  

p28

hsqcedetgpsp.3  

  <lrec

1H d1

d4 d4 d4 d4

   

13C

 <l1

  d0 d0

 

  d21 d21

 

   GARP

 

 15N

   optional

 

pp1144 sp3

p31 sp18

p31 sp18

pp1144 sp3

pl12

  

Gz

 

G2  

G1  

   

©2006: Bruker BioSpin , Teodor Parella 129

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

hsqcedetgpsisp   

 1H d1

y y  

d4 d4 p28 d24 d24

 

  d4 d4

 <lrec

 

 

 13C

 

 15N

       optional

 

    pp1144 sp3

<l1   d0 d0

 

 d21 d21

'I'  

    pp1144 sp3

   GARP  pl12

  

Gz

 G2

G1  

 hsqcedetgpsisp2

  

 1H

d1

y y  

d4 d4 p28 d24 d24

 

  d4 d4

 <lrec

   

13C

 

 15N optional

    

 pp1144 sp3

 <l1

   d0 d0

   d21 d21

 'I'

     pp1144 sp3

    GARP  

pl12

  

Gz  

G3 G3 G4 G4 G2 G1

                          

©2006: Bruker BioSpin , Teodor Parella 130

d4

d4

d4

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

 hsqcedetgpsisp.2

 

  

 1H

d1 d4

y y  

p28 d24 d24

 

  d4 d4

 <lrec

   

13C   

 Gz

     pp1144 sp3

 

<l1  

  d0 d0

 

d21

d21

pp2244 sp7

    G1

     pp2244 sp7

 'I'

     pp1144 sp3

 

   

GARP  

pl12  

   G2

    

hsqcedetgpsisp2.2  

  

 1H

d1 d4

y y  

p28 d24 d24

 

  d4 d4

 <lrec

   

13C   

 Gz

     pp1144 sp3

 

<l1  

  d0 d0

 

d21

d21

pp2244 sp7

     pp2244 sp7

 'I'

     pp1144 sp3

 

   GARP  pl12

G3 G3 G4 G4 G2 G1

    

 hsqcedetgpsisp2.3

 

  

 1H

d1 d4

y y  

p28 d24 d24

 

  d4 d4

 <lrec

   

13C

 

<l1  

  d0 d0

 

  d21 d21

 'I'

 

   GARP

 

pp1144 p31 p31  

pp2244  

pp1144  pl12

sp3  

Gz

sp18sp18 sp7 sp3

G3 G3 G4 G4 G2 G1

   

 

©2006: Bruker BioSpin , Teodor Parella 131

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 

hsqcedetf3gpsi  

  

  

1H d1

 

  d26

 

  d26

y y  p28

d24 d24

 

  d26 d26

 <lrec

 

  

15N

13C

Gz

       optional

<l1   d0 d0      pp1144 sp3

  d21 d21           G1

'I'    

GARP

pl16        G2

   

hsqcedetf3gpsi2  

 y y

<lrec

1H d1  

d26  

d26 p28  

d24 d24  

d26 d26

   

15N

13C

Gz

       optional

<l1   d0 d0      pp1144 sp3

  d21 d21

'I'    GARP  

pl16

 G3 G3 G4 G4 G2

G1  

                          

©2006: Bruker BioSpin , Teodor Parella 132

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D CONSTANT-TIME HSQC AND HMQC

EXPERIMENTS                              

©2006: Bruker BioSpin , Teodor Parella 133

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

2D Constant-time Correlations  

Phase-sensitive Constant-time ge-2D HSQC  

o Using adiabatic pulses (hsqcctetgpsp) o Using adiabatic pulses without CO refocusing (hsqcctetgpsp.2) o Using adiabatic pulses and PEP (hsqcctetgpsisp)

 Phase-sensitive Constant-time ge-2D HMQC

 o Using adiabatic pulses (hmqcctetgp) o For correlating CH2 groups (hsqcctetgp.2)

 Also see hsqcctetgpjc and hsqcctetgpjclr

    

hsqcctetgpsp    

1H d1 d4

 

y  

d4 p28

   d4 d4

 <lrec

 

<l1  

13C  

 13CO

 

 p8

sp13

 

d0   pp1144

d23   pp1144 sp3

d23-d0   p8 sp13

 GARP

pl12

   

15N

sp5  pp1144 sp5

  

Gz

 

G1 G2   

hsqcctetgpsp.2  

  

 1H d1 d4

y  

d4 p28

 

  d4 d4

 <lrec

 

<l1  

13C    

15N

     optional

  p8 sp13

d0 d23 d23-d0   p8 sp13

 GARP

pl12

  

Gz

 G2

G1   

 ©2006: Bruker BioSpin , Teodor Parella 134

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

hsqcctetgpsisp   

 1H d1

y y  

d4 d4 p28 d24 d24

 

  d4 d4

 <lrec

 

 

 13C

  

13CO  

 15N

 

    p8 sp13

<l1

d0

pp1144 sp5

pp1144 sp3

 

d23 d23-d0    

 pp1144 sp5

 

    p8 sp13

   GARP  

pl12

  

Gz

 

G1 G2                                           

 ©2006: Bruker BioSpin , Teodor Parella 135

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

        

hmqcctetgp  

   

 1H d1 d4 d4

  d4 d4

<lrec

  

 13C

 

  

15N

       optional

   

 pp1144 sp3

<l1   d23/2 -d0

  d23/2 -d0

 

  d0 d0

 

    pp1144 sp3

   GARP

pl12

  

Gz

 

G3 G4 G2  

G1 G1             

hmqcctetgp.2  

   

 1H d1 d2 d2

  d2 d2

<lrec

  

 13C

 

  

15N

       optional

<l1   d23/2 -d0

  d23/2 -d0

 

  d0 d0

   GARP

pl12

  

Gz

 

G3 G3 G3 G2  

G1 G1         

©2006: Bruker BioSpin , Teodor Parella 136

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide  

     

2D INVERSE-INEPT EXPERIMENT

                                

©2006: Bruker BioSpin , Teodor Parella 137

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

 Phase-sensitive ge-2D Inverse INEPT using echo-antiecho (xhcoetgp)

 

       

xhcoetgp    

1H d4 d4   

 13C d1

 

d0 d0 d3 d3  GARP

pl12  

Gz G1

 

G2                                        

 ©2006: Bruker BioSpin , Teodor Parella 138

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D SPIN-EDITED HSQC EXPERIMENTS

 

                               

©2006: Bruker BioSpin , Teodor Parella 139

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

      

One-bond 1H-15N Couplings

• ge-2D 1H-15N a ,�-HSQC (hsqcetf3gpss)

• ge-2D 1H-15N HSQC-IPAP using watergate (hsqcf3gpiaphwg)

• ge-2D 1H-15N HSQC-IPAP using watergate and sensitivity improvement (hsqcf3gpiaphsiwg)

One-bond 1H-13C Couplings

• 2D H-1/C-13 CT-HSQC (hsqcctetgpjc)  

                                                          

©2006: Bruker BioSpin , Teodor Parella 140

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 HSQC

 8N

    

f2-coupled

8N

8H

8H

     

f1,f2-coupled

8N

8H

 

  

f1-coupled

8N

8H

 

    

a,�-HSQC E.COSY TROSY half TROSY/ IPAP  

8N 8N 8N 8N

   

8N 8N  

 8H 8H

8N 8N

 

 

8H 8H 8H

 

SPIN-STATESELECTIVEEXCITATION  

   

ppm  

105

2D HSQC 2D alpha-HSQC 2D beta-HSQC   ppm  105

 110 110

 115 115

 120 120

 125 125

 130

10 9 8 7  ppm 10 9 8 7

 ppm 10 9 8 7 6

130 ppm

 ppm 118

ppm 118

 

120 120  

122 122  

 6.3 6.2 6.1 6.0 ppm 6.3 6.2 6.1 6.0 ppm 6.3 6.2 6.1 6.0 ppm

  

 ©2006: Bruker BioSpin , Teodor Parella 141

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

hsqcetf3gpss   

 1H d1

 

 d26

 

 d26

y  p28 8

 

 d26

 

 d26 8 8

 <lrec

 

<l1 'I'  

15N  

  

13C

     optional

 d0 d0 8 8

  GARP  

pl16

 

pp1144 sp3

Gz  

G1 G3 G2

 

           

ppm  

105

2D HSQC 2D F2-coupled HSQC 2D F1-coupled HSQC   ppm  105

 110 110

 115 115

 120 120

 125 125

 130

10 9 8 7  ppm 10 9 8 7

 ppm 10 9 8 7 6

130 ppm

 ppm 118

 120

 122

 

ppm 118  120  122

 6.3 6.2 6.1 6.0 ppm 6.3 6.2 6.1 6.0 ppm

 

6.3  

6.2  

6.1  

6.0  

ppm        

©2006: Bruker BioSpin , Teodor Parella 142

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

     

hsqcf3gpiaphsiwg  

y y y y <l  d24 d24

 1H

d1

   

15N

 d26  

y

 d26

-x   p11 sp1

   <l1  8 d0

 d24 d24

y   'I'

-x -x <lrec     

 GARP

  

Gz

 

G1 G2 G2 G3 G3  

     

hsqcf3gpiaphwg  

y d26 d26

 

 <lrec

1H d1 d26 d26  y

 

 <l1

-x -x  

p11 sp1

 15N

  

13C

 8

 

  optional

 8 d21/2

 d21/2

 

d0 d0 8   GARP

pl16

 p8

Gz sp13

 

G1 G2 G2 G3 G4 G4 G5 G6 G6     

 

     

©2006: Bruker BioSpin , Teodor Parella 143

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

          

 hsqcctetgpjc

  

  

1H d1

y  d4 d4

 

 d4 d4

 <lrec

 

<l1

 13C

 

 13CO

 

 15N

8 8     

pp1144 sp5

d23-d0   pp1144 sp3

d28 d23-d28 d0     

pp1144 sp5

 GARP

pl12

GARP  

pl16  

Gz

 G1 G2

 G3 G4 G5

                                        

©2006: Bruker BioSpin , Teodor Parella 144

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D TROSY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 145

   

       

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

 

 

2D TROSY Experiments  

From f2 channel:  

Phase-sensitive ge-2D TROSY with presaturation (trosygpphpr) ge-2D TROSY for aromatic residues with WATERGATE (trosyargpphwg)

 From f3 channel:

 Phase-sensitive ge-2D 1H-15N TROSY

 o Using echo-antiecho (trosyetf3gpsi | TROSYETF3GPSI) o Using echo-antiecho and different phase cycling (trosyetf3gpsi2) o Using echo-antiecho and different phase cycling to give IPAP TROSY

(trosyetf3gpiasi) o Using WATERGATE (3-9-19) (trosyf3gpph19 | TROSYF3GPPH19) o Using WATERGATE and improved sensitivity (trosyf3gpphsi19 |

TROSYF3GPPHSI19)  

Phase-sensitive ge-2D 1H-15N ZQ-TROSY using WATERGATE (trosyzqgpphwg)   

 

 

  

1JNH TROSY

 

  

H C H H C H  

N C C N C C  

H H O H H

O       

TROSY   

8N     

8N  

  

8H 8H    

©2006: Bruker BioSpin , Teodor Parella 146

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

trosyf3gpph19   

 1H d1

 

 d26

y y  d26 d24 d24 d26 d26

 <lrec

 

<l1 y  

15N  8 d0

 

 Gz

 G1 G1G2 G3 G3 G4 G4

      

trosyf3gpphsi19  

y -y y  <lrec

1H d1

d26 d26 d24 d24 d26 d26

 

  

15N

 

<l1 y  

d0  

  

Gz

G1 G1

  G2 G2

  G3 G3

      

trosyf3gpphsi19.2   

y -y y  <lrec

1H d1

d26 d26 d24 d24 d26 d26

 

  

15N

 

<l1 y

 d0

   

13C optional  

 Gz

  p14 sp3

G1 G1 G2 G2 G3 G3      

©2006: Bruker BioSpin , Teodor Parella 147

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

trosyetf3gpsi   

  

1H d1

 

  d26

y -y  

d26 d24 d24 d26 d26 8 8

 <lrec

 

  

15N

 <l1

 

y e

 d0 d0 8 8

 

 13C optional

 

 Gz

  p14 sp3

G1 G1 G3 G3 G4 G4 G5  

G2 G2         

ppm  

105

2D HSQC 2D TROSY 2D half-TROSY   ppm  105

 110 110

 115 115

 120 120

 125 125

 130

10 9 8 7  ppm 10 9 8 7

 ppm 10 9 8 7 6

130 ppm

 ppm

118

ppm

118  

120  120

 122

 122

 

 6.3 6.2 6.1 6.0 ppm 6.3 6.2 6.1 6.0 ppm 6.3 6.2 6.1 6.0 ppm

          

 ©2006: Bruker BioSpin , Teodor Parella 148

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

        

trosyetf3gpsi2  

y -y y y  

 1H d1

 

  

15N

 d26

 d26

-x  

 pp1111 sp1

    <l1

      d0 d0 8

 

d24   

pp2299 sp11

 

8

 d24 d26 d26 8 8  

y

<lrec

 

 13C optional

 

 Gz

  

p8 sp13

  G1

      G4 G4 G5 G5 G3

 

G2 G2  

          

trosyetf3gpiasi  

y -y y y  

 1H d1

 

  

15N

 d26

 d26

-x  

 pp1111 sp1

    <l1

      d0 d0 8

 

d24   

pp2299 sp11

 

8

 d24 d26 d26 8 8  

y

<lrec

 

 13C optional

 

 Gz

  

p8 sp13

  G1

      G4 G4 G5 G5 G3

 

G2 G2              

©2006: Bruker BioSpin , Teodor Parella 149

H

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

trosygpphpr  

 

 1 d1

presat d4 pl9

 

 

X

y  

 d4  

<l1  

8 d0

y   

d4 d4  

y

   d4 d4

 <lrec

  

Gz

 G1 G1G2 G3 G3 G4 G4

       

 trosyzqgpphwg

 -x d26 d26 <lrec

1H d1   pp1111 sp1-x

d26 d26  

  <l1

-x -x

 y

 15N d0

 

  

Gz

G1 G1

  G2 G2

      

 trosyargpphwg

  

 1H d1 -y d4

 -y

  d4 d4/2 d4/2

 

 d4 d4

-x -x

  <lrec

 <l1

 

Carom d23-d4/2 +d0

d23-d4/2 8 -d0

 

 Gz

G1 G1 G2 G2

  G3 G4 G4

 

       

©2006: Bruker BioSpin , Teodor Parella 150

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D CRINEPT EXPERIMENT                                   

©2006: Bruker BioSpin , Teodor Parella 151

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

          

ge-2D 1H-15N CRINEPT using flip-back (crineptgpph)              

crineptgpph    

1H d1    

15N

  -x

 

 pp1111 sp1

y  

d21 -y     

d0

  d21

  -x     

d21

     <l1

 

<lrec

  

Gz

 G1 G2 G2 G2

                                  

©2006: Bruker BioSpin , Teodor Parella 152

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HMQC-COSY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 153

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

 

 

 

2D HMQC-COSY Experiments  

Phase cycled:  

Magnitude-mode 2D HMQC-COSY using BIRD (hmqcbindqfrl) Phase-sensitive 2D HMQC-COSY using BIRD with decoupling (hmqcbiphrl) Phase-sensitive 2D HMQC-COSY using BIRD without decoupling (hmqcbindphrl) Phase-sensitive 2D HMQC-COSY-DQF using BIRD (hmqcbidfphrl)

 Gradient-enhanced:

 

Magnitude-mode ge-2D HMQC-COSY (hmqcgpqfrl) H2BC experiment with a three-low-pass filter (h2bcetgpl3)

 Also see HMQC and HMQC-TOCSY experiments

   

 

       

H H 1JCH

JHH    

H H H H

C C C N C C N C        

     

1H d1 d2

hmqcgpqfrl    8 8 d2

  y

 d4 d4

   <lrec

 <l1

 

X d0 d0

 

 

Gz

 GARP

pl12

 G1 G2 G3

         

 ©2006: Bruker BioSpin , Teodor Parella 154

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

          

hmqcbindqfrl  

hmqcbindphrl  

-x y

 1H

d1

 d2 d2 d7

 d2 d2

 <lrec

 

<ll  

d0 d0 X

         

hmqcbiphrl  

-x y  

 <lrec

1H d1

d2 d2 d7 d2 d2

 

<ll  

d0 d0 X

 

 GARP pl12

       

 hmqcbidfphrl

   

1H d1

-x  d2 d2 d7

  d2 d2

 

 <lrec

 

<ll  

d0 d0 X

 GARP

pl12           

 ©2006: Bruker BioSpin , Teodor Parella 155

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

        

 h2bcetgp13

 y

   <lrec

1H d1

d20 d2 d4 d4

 <l1

  

X GARP  

 

Gz

d0 d0 8 8  pp2244 sp7

 

     G1*

 

     G1* G1

 GARP

pl12

 G1 G1

0.15 0.35

                                                

©2006: Bruker BioSpin , Teodor Parella 156

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HMQC-TOCSY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 157

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0  

 

    

• Phase-cycled:  

Phase-sensitive 2D HMQC-TOCSY (hmqcmlph) Phase-sensitive 2D HMQC-TOCSY without decoupling (hmqcmlndph) Magnitude-mode 2D HMQC-TOCSY using BIRD (hmqcbimlqf) Magnitude-mode 2D HMQC-TOCSY using BIRD without decoupling (hmqcbimlndqf)

 Phase-sensitive 2D HMQC-TOCSY using BIRD (hmqcbimlph) Phase-sensitive 2D HMQC-TOCSY using BIRD without decoupling (hmqcbimlndph)

 • Phase-cycled and solvent suppression:

 Phase-sensitive 2D HMQC-TOCSY with presaturation (hmqcmlphpr) Phase-sensitive2D HMQC-TOCSY with p resaturation and without decoupling (hmqcmlndphpr)

 • Gradient-enhanced from f2 channel:

 Magnitude-mode ge-2D HMQC-TOCSY with MLEV (hmqcgpmlqf | HMQCGPML) Phase-sensitive ge-2D HMQC-TOCSY with DIPSI -2 using echo-antiecho (hmqcdietgp) Phase-sensitive ge-2D HMQC-TOCSY with DIPSI -2 using PEP (hmqcdietgpsi) Phase-sensitive ge-2D HMQC-TOCSY with DIPSI-2 using PEP using shorter overall timing (hmqcdietgpsi.2)

 • Gradient-enhanced from f3 channel:

 

Phase sensitive ge-2D 1H-15N HMQC-TOCSY with DIPSI -2 using echo-antiecho (hmqcdietf3gp) Phase sensitive ge-2D 1H-15N HMQC-TOCSY with DIPSI -2 using PEP (hmqcdietf3gpsi) Phase sensitive ge-2D 1H-15N HMQC-TOCSY with DIPSI -2 using PEP and shorther overall timing( hmqcdietf3gpsi.2)

       

 

                   

©2006: Bruker BioSpin , Teodor Parella 158

H d2 d2

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

hmqcmlndph hmqcmlph  

  

1H d1  d2 d2

 <ll

d9  

MLEV-17 y

p6 pl10

<lrec  1H d1

 d2 d2

d9  

MLEV-17y

p6 pl10

 <lrec

 

d0 d0 X X

d0 d0  

 GARP

pl12   

hmqcmlndphpr    

d1 H presat

pl9

 d2 d2  

 <ll

d9  

MLEV-17y

p6 pl10

 

<lrec

d0 d0 X

  

hmqcmlphpr   

d1 1

presat pl9

d9

MLEV-17y

p6 pl10

d0 d0 X

 GARP pl12

       

1H d1

   

-x  d2 d2 d7

hmqcbimlqf

hmqcbimlph  

 d2 d2

 

 <ll

    

d9

MLEV-17

p6 pl10

 

    <lrec

 d0 d0

X

  GARP pl12

   

hmqcbimlndqf hmqcbimlndph

-x

   

 d9 <lrec

1H d1

d2 d2 d7 d2 d2  

 <ll

 

MLEV-17 y

p6 pl10

 

d0 d0 X

    

©2006: Bruker BioSpin , Teodor Parella 159

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

                

H H 1JCH

JHH JHH JHH

 

H H H H

C C C N C C N C  

       

JHH

 

H H

JHH JHH

 

H H H H 1JNH

C C C N C C N C  

        

hmqcgpmlqf    

1H d1 d2 8 8 d9

d2 8 8 MLEV-17y

<lrec

<l1 p6 pl10

13C

  

Gz

d0 d0  GARP

pl12

 G1 G2 G3

               

©2006: Bruker BioSpin , Teodor Parella 160

p14p14

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 hmqcdietgp

   

1H d1

   

13C

 

 d2  

 <l1

 

 d2

 

   d0 d0

8 8

y

d9 8 8

DIPSI-2y

p6 pl10

 

<lrec       GARP

 15N optional

 Gz

pp1144 sp3

pl12

 GARP

pl16

 

G2  

G1 G1   

 hmqcdietgpsi

   

1H d1

   

13C

 

 d2

 <l1

       d0 d0

     

lf'

 8 8

     lf'

  d2 d2 d2

y

y

d9 8 8

DIPSI-2  

p6 pl10

 

 <lrec

     GARP

 15N

 

 

Gz

  optional

pp1144 sp3

pl12

 GARP

pl16

 G2

 G1 G1

 

    

hmqcdietgpsi.2    

1H d1 d4  d4 d4 d4 d4 d4

d9 8 8

DIPSI-2

<lrec

   

13C  

15N

Gz

     

pp1144 sp3

optional

 <l1

   d0 d0

 lf'

 8 8

 

lf' y  

p6 pl10

    GARP pl12

 GARP pl16

 G2

 

G1 G1   

 ©2006: Bruker BioSpin , Teodor Parella 161

p14p14

H

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 hmqcdietf3gp

 

 

 1 d1 d21

 

    <l1

 

  d21

y  

d9 8 8

DIPSI-2y

 

 <lrec

 15N 8 d0 d0 8  

GARP pl16

 13C optional

 Gz

 8 8  pp1144 sp3

 GARP

pl12

   

G1 G1

G2  G1 G1

  

 hmqcdietf3gpsi

   

1H d1

   

15N

   d21

    

 <l1

 8

        d0 d0

 

     lf'

 

     

lf'  8

   d21

   d21 d21

y

y

d9 8 8

DIPSI-2

p6 pl10

 

 <lrec  

     GARP

pl16

13C optional  

 

Gz

 

8 8  pp1144 sp3

 GARP

pl12

  

G1 G1

 G2

 

G1 G1     

hmqcdietf3gpsi.2    

1H d1

   d26

   d26 d26 d26 d26 d26

 <l1

y

d9 8 8

DIPSI-2

p6

  <lrec

  

15N

  

13C optional  

 

Gz

  8 d0 d0    

8 8  

pp1144 sp3

lf' lf' y  8

pl10    

GARP pl16

 GARP pl12

 

 G2

 

G1 G1  

G1 G1    

 ©2006: Bruker BioSpin , Teodor Parella 162

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HMQC-ROESY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 163

CH

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

• Gradient-enhanced from the f2 channel  

Phase-sensitive ge-2D HMQC-ROESY using echo-antiecho (hmqcetgpro) Phase-sensitive ge-2D HMQC-ROESY with T-ROESY using echo-antiecho (hmqcetgpro.2)

 • Gradient-enhanced from the f3 channel

 

Phase-sensitive ge-2D 1H-15N HMQC-ROESY using echo-antiecho (hmqcetf3gpro) Phase-sensitive ge-2D 1H-15N HMQC-ROESY with T-ROESY using echo-antiecho (hmqcetf3gpro.2)

 

 

 

  

H NOE

H 1J

 

C  

     

hmqcetgpro  

 

 1H

   

13C

 d1 d2

 

   <l1

 

 d2

 

   d0 d0 8 8

p15 pl11 8 8

 CW y

 

<lrec      GARP

 

 15Noptional

 Gz

pp1144 sp3

pl12

 GARP

pl16

 

       

1H d1 d2

 

 G1 G1

hmqcetgpro.2  

 x

d2

G2   

 p25 pl27

x x x x 8 8

      <lrec

   

13C  

15N

Gz

      

 optional

 <l1

   pp1144 sp3

  

 d0 d0 8 8

 

-x -x -x -x -x T-ROESY

   

 GARP

pl12

 GARP

pl16

 

G2  

G1 G1  

 

©2006: Bruker BioSpin , Teodor Parella 164

p14p14

p14p14

NH

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

H NOE

H 1J

 

N  

       

hmqcetf3gpro    

1H d1

  

 15N

 

 d21

    <l1

 8

      d0 d0

 

 d21

 

   8

p15 pl11 8 8

 CWy

<lrec  

     GARP pl16

 13C optional

 Gz

 8 8  pp1144 sp3

 GARP

pl12

  

 G1 G1

G2  

G1 G1    

hmqcetf3gpro.2  

p25 pl27

x x x x x

 

 <lrec

1H d1   

 15N

d21    <l1  

8

 

    d0 d0

d21 8 8  

-x -x -x -x -x T-ROESY

 8

 

     GARP pl16

 13C optional

 Gz

 

8 8  pp1144 sp3

 GARP pl12

  

 G1 G1

G2  

G1 G1          

©2006: Bruker BioSpin , Teodor Parella 165

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

                                                                           

©2006: Bruker BioSpin , Teodor Parella 166

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HMQC-NOESY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 167

CH

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

• Phase cycled:  

Phase-sensitive 2D HMQC-NOESY with presaturation (hmqcnophpr) Phase-sensitive 2D HMQC-NOESY using BIRD (hmqcbinoph)

 

 • Gradient-enhanced from the f2 channel:

 Phase-sensitive ge-2D HMQC-NOESY using echo-antiecho (hmqcetgpno)

 

 • Gradient-enhanced from the f3 channel:

 Phase-sensitive ge-2D 1H-15N HMQC-NOESY using echo-antiecho (hmqcetf3gpno)

     

H NOE

H 1J

 

C         

hmqcnophpr  

 1H d1

presat

pl9

 

d2 d2 d8 presat

 

<ll

<lrec

 

X d0 d0   GARP

pl12    

 hmqcbinoph

   

1H d1

 -x

 d2 d2 d7

 

  d2 d2 d8

  <lrec

 

<ll  

d0 d0 X

 GARP

pl12       

©2006: Bruker BioSpin , Teodor Parella 168

p14p14

NH

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

         

H NOE

H 1J

 

N  

        

hmqcetgpno  

  

1H d1 d2

 d2 d8

<lrec o o

   

13C

  

15N

<l1   

 pp1144 sp3

 

  d0 d0 o o

  

 GARP

pl12

optional GARP

pl16 Gz

 

G3 G2  

G1 G1    

hmqcetf3gpno  

   

1H d1  d21

 d21 d8 o o

<lrec

  

 15N

  

13C optional  

Gz

<l1  

o

  d0 d0 o    

o o  

pp1144 sp3

  

 GARP pl16

 GARP

pl12

  

 G1 G1

 

 G1 G1

G3 G2

        

©2006: Bruker BioSpin , Teodor Parella 169

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

                                                                           

©2006: Bruker BioSpin , Teodor Parella 170

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HSQC-TOCSY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 171

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 

   

Gradient-enhanced from the f2 channel  

Phase sensitive ge-2D HSQC-TOCSY with MLEV using z-filter (hsqcgpmlph | HSQCGPMLPH) Phase-sensitive ge-2D HSQC-TOCSY with MLEV using echo-antiecho (hsqcetgpml | HSQCETGPML) Phase-sensitive ge-2D HSQC-TOCSY with DIPSI-2 using PEP (hsqcdietgpsi) Phase-sensitive ge-2D HSQC-TOCSY with DIPSI-2 using PEP and adiabatic inversion pulses (hsqcdietgpsisp | HSQCDIETGPSISP) Phase-sensitive ge-2D HSQC-TOCSY with DIPSI-2 using PEP and adiabatic inversion and refocusing pulses (hsqcdietgpsisp.2)

 Gradient-enhanced with editing from the f2 channel

 Phase sensitive ge-2D HSQC-TOCSY using PEP with editing of multiplicity (hsqcdiedetgpsisp.1) Phase sensitive ge-2D HSQC-TOCSY using PEP with editing of direct responses (hsqcdiedetgpsisp.2) Phase sensitive ge-2D HSQC-TOCSY using PEP with editing of multiplicity and direct responses (hsqcdiedetgpsisp.3)

 Gradient-enhanced from the f3 channel

 Phase sensitive ge-2D 1H-15N HSQC-TOCSY with MLEV using echo-antiecho (hsqcetf3gpml) Phase sensitive ge-2D 1H-15N HSQC-TOCSY with DIPSI-2 using PEP (hsqcdietf3gpsi | HSQCDIETF3GPSI)

 Also see HSQC-TOCSY type experiments for nJCH measurements

                                

 ©2006: Bruker BioSpin , Teodor Parella 172

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

            

H H 1JCH

JHH JHH JHH

 

H H H H

C C C N C C N C      

 hsqcgpmlph

  

 1H d1 d4

y  

d4 p28 p28

 

  d4 d4

 d9

MLEV-17 8 8

 <!rec

  

 

X 8 8 8

  

Gz

 

 d0 d0 c

pl10  

  GARP

pl12

 G1 G2 G3

 

        

hsqcetgpml  

 

 1H d1

   

13C

 

 d4 d4

y  p28   

<!1

       d0 d0 8 8

 

  d4 d4

 d9

MLEV-17 8 8 p6 pl10

 <!rec       GARP

pl12  

15N optional  

 Gz

 

 G1

 GARP

 

pl16    G2

 

      

©2006: Bruker BioSpin , Teodor Parella 173

   

 

 

 

 

 

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

hsqcdietgpsi  

 y y

d9 <!rec 1H d1

   

13C

 

 15N

d4 d4 p28   

<!1

 

    d0 d0 8 8

d24 d24

 \f

d4 d4 8 8  DIPSI-2 (y)

p6 pl10

 

     GARP

pl12

optional   

Gz

GARP  

pl16

 

G2 G1

        

ppm    

20   

 30

  

 40

  

 50

  

 60

 

    

9.5 9.0 8.5 8.0 7.5 7.0 ppm        

©2006: Bruker BioSpin , Teodor Parella 174

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

             

hsqcdietgpsisp  

y y d9 <!rec

1H d1    

13C

d4 d4       

pp1144 sp3

p28   

<!1

 

    d0 d0 8 8

d24 d24

 \f

d4 d4  

     

pp1144 sp3

8 8  DIPSI-2 (y)

p6 pl10

 

     GARP

pl12

15N  

 Gz

optional  

GARP

pl16

 

G2 G1

     

 hsqcdietgpsisp.2

 y y

d9 <!rec 1H

d1

   

13C

   

Gz

d4 d4       

pp1144 sp3

p28   

<!1

 

    d0 d0

 

    8 8  pp2244 sp7

d24 d24

 \f

   

pp2244 sp7

d4 d4  

     

pp1144 sp3

8 8  DIPSI-2 (y)

p6 pl10

 

     GARP

pl12

 G2

G1  

                

©2006: Bruker BioSpin , Teodor Parella 175

p24p24 p24p24

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

 hsqcdiedetgpsisp.1

 y y

d9 <!rec 1H d1

   

13C

   

Gz

d4 d4       

pp1144 sp3

p28   

<!1

     d0 d0

     d21

       pp2244 sp7

     d21

d24        pp2244 sp7

d24

 \f

d4 d4  

     

pp1144 sp3

8 8  DIPSI-2 (y)

p6 pl10

 

     GARP

pl12

 G2

G1  

      

hsqcdiedetgpsisp.2  

y y d9 <!rec

1H d1    

13C

   

Gz

d4 d4       

pp1144 sp3

p28   

<!1

     d0 d0

     8 8  pp2244 sp7

d24        pp2244 sp7

d24

 \f

d4 d4  

     

pp1144 sp3

 

 DIPSI-2 (y)

p6 pl10

d2 d2       

pp1144 sp3

 

     GARP

pl12

 G2

G1       

hsqcdiedetgpsisp.3  

y y d9 <!rec

1H d1    

13C

   

Gz

d4 d4       

pp1144 sp3

p28   

<!1

     d0 d0

     d21

       pp2244 sp7

     d21

 

d24        pp2244 sp7

d24 d4

 \f

 

d4  

     pp1144 sp3

 

 DIPSI-2 (y)

p6 pl10

d2 d2       

pp1144 sp3

 

     GARP

pl12

 G2

G1     

©2006: Bruker BioSpin , Teodor Parella 176

15 •

13 tO • '.23 • • tt • ••

0

 

Pulse Program Catalogue NMRGuide 4.1- Topspin 2.0

RUKER IOSPIN

 

       

22      

17 •

17  

...... •

   

ppm    

.. <10

.... 1<1 • D • • 30

11 ...

28 .... • • • "" • so

8,16 c . . • • .. a) ... 60

12 • • • •   

 red: D.irect Peaks

 

Black: TOCSY peaks

70  80

 90

 100  110  120

22 ta> " 130

6.0 5.5 5.0 <1.5 <1.0 3.5 3.0 2.5 2.0 1.5 ppm           

A) B) C) D) !:)  

 ppm.

6 0 • • •  

 

2 a :: 65

a 70

75  

 80

 

85   

90

1 9         

©2006: Bruker BioSpin , Teodor Parella 177

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

 JHH

 

H H

JHH JHH

 

H H H H 1JNH

C C C N C C N C         

hsqcetf3gpml   

 1H d1

  

 15N

  

13C

 

 d26

 

 d26

y  p28

 

 8  

 <!1

       d0 d0

 

 d26 d26

  

 8 8

 d9

MLEV-17 8 8  

p6 pl10

 <!rec       GARP

pl16

optional   

Gz

 pp1144 sp3

  G1

G2

GARP pl12

   G3

   

 hsqcdietf3gpsi

 

y y  

p28

 

d9 <!rec

1H d1  

  

15N

 

 13C

d26 d26   <!1  8

    d0 d0 8 8

d24 d24 d26 d26

 \f

8 8  DIPSI-2 (y)

p6 pl10

     GARP

pl16

optional   

Gz

 

 pp1144 sp3

GARP

pl12

 G1 G3

G2  

      

©2006: Bruker BioSpin , Teodor Parella 178

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HSQC-ROESY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 179

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

   

 

 

 • Gradient-enhanced from the f2 channel

 Phase-sensitive ge-2D HSQC-ROESY using echo-antiecho and adiabatic pulses (hsqcetgprosp | HSQCETGPROSP) Phase-sensitive ge-2D HSQC-ROESY using echo-antiecho and adiabatic pulses with T- ROESY(hsqcetgprosp.2)

 

 • Gradient-enhanced from the f3 channel

 Phase-sensitive ge-2D 1H-15N HSQC-ROESY using echo-antiecho (hsqcetf3gpro) Phase-sensitive ge-2D 1H-15N HSQC-ROESY with T-ROESY using echo-antiecho (hsqcetf3gpro.2)

  

 

                                                 

©2006: Bruker BioSpin , Teodor Parella 180

CH

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

        

 

H NOE

H 1J

 

C          

hsqcetgprosp   

 1H d1

   

13C

 

 d4 d4       

pp1144 sp3

y  p28   

<!1

       d0 d0

 

  d4 d4  

     

pp1144 sp3

 p15 pl11  

 CW

 <!rec       GARP

pl12

15N  

 Gz

optional  

     

G1

GARP

pl16    G2

  

    

 1H d1

    d4 d4

  

y  p28

hsqcetgprosp.2    

d4 d4

 

 p25 pl27

x x x x x

   <!rec

   

13C

 

 15N

Gz

 

       optional

    

 pp1144 sp3

 <!1

   d0 d0

          

G1

    

 pp1144 sp3

-x -x -x -x -x T-ROESY

    

GARP

pl12

 GARP

pl16    G2

 

      

©2006: Bruker BioSpin , Teodor Parella 181

NH

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

        

H NOE

H 1J

 

N          

hsqcetf3gpro   

  

1H d1

 

 d26

y  

d26 p28 d26 d26  

 <!1

 p15 pl11  

 CW

 <!rec

  

15N   

13C

Gz

     optional

d0 d0      

pp1144 sp3

  G1

G2

 GARP

pl16

 GARP pl12

   G3

 

    

 y

 p28

hsqcetf3gpro.2  p25 pl27

x x x x x

 

  <!rec

1H d1   

 15N

  

13C

d26 d26 d26 d26  

 <!1

 d0 d0

 

 -x -x -x -x -x

T-ROESY

    

 GARP pl16

optional   

Gz

 pp1144 sp3

  G1

G2

GARP

pl12    G3

 

       

©2006: Bruker BioSpin , Teodor Parella 182

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HSQC-NOESY EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 183

CH

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

       

• Gradient-enhanced from the f2 channel  

Phase-sensitive ge-2D HSQC-NOESY using echo-antiecho and adiabatic pulses (hsqcetgpnosp | HSQCETGPNOSP)

 

 

• Gradient-enhanced from the f3 channel  

Phase-sensitive ge-2D 1H-15N HSQC-NOESY using echo-antiecho (hsqcetf3gpno | HSQCETF3GPNO) Phase-sensitive ge-2D 1H-15N HSQC-NOESY using XY16 and WATERGATE (hsqcf3gpnowgxy)

 

         

H NOE

H 1J

 

C        

 hsqcetgpnosp

  

 1H d1

 

 d4 d4

y  p28

 

  d4 d4 d8

 qorec

 

8 8   

  

13C

 

 15N optional

 

 Gz

 

    pp1144 sp3

qo1   d0 d0 8 8           

G1

 

    pp1144 sp3

            G3 G2

   GARP

p112  

 GARP

p116

         

©2006: Bruker BioSpin , Teodor Parella 184

NH

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

H NOE

H 1J

 

N          

hsqcetf3gpno    

 1H d1

 

 d26

 

 d26

y  p28 8

 

 d26 d26 d8

 qorec

 

8 8  

qo1   

15N

  

13C optional  

 Gz

d0 d0 8 8      

pp1144 sp3

  G1

G2

          G4 G3

 GARP

p116  

 GARP

p112

     

hsqcf3gpnowgxy    

 1H d1

 

  d26

xy16 y  

d26 8

xy16  d26 d26

 -x -x -x

d8

 

 qorec

 

  

15N

 xy16

 qo1

 

  d0 d0 £ 8

 xy16

 pp2299 sp11

 pp1111 sp1

    GARP

 13C

 

 

Gz

  optional

 

loop loop

 

 p8 sp13

pl16

 GARP

pl12

 

G1 G1 G2 G3 G3        

©2006: Bruker BioSpin , Teodor Parella 185

· ..

35

4

 

Pulse Program Catalogue NMRGuide 4.1 -Topspin 2.0

RUKER IOSPIN

       

 14 17

 ppm

 1'

 

  

t

€1 ft

  

 

oO ,. •  

25  

30

..,. 40

€) ooo · 45

I •• ' so  

•• f3 55

() 10 60 8,16

 2J

&  0 65

9 q ,, 70

12 oa cy 75

80  

 4.0 3.5 3.0 2.5 2.0 l.S ppm

                                         

©2006: Bruker BioSpin , Teodor Parella 186

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D HMBC EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 187

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

     

Phase cycled:  

Magnitude-mode 2D HMBC using low-pass J-filter (hmbclpndqf | HMBCLPND) Magnitude-mode 2D HMBC with presaturation (hmbcndprqf) Magnitude-mode 2D HMBC with off-resonance presaturation (hmbcndpsqf)

 Gradient-based:

 Magnitude-mode ge-2D HMBC (hmbcgpndqf | HMBCGPND) Magnitude-mode ge-2D HMBC using low-pass J-filter (hmbcgplpndqf | HMBCGPLPND) Magnitude-mode ge-2D HMBC using double low-pass J-filter (hmbcgpl2ndqf)

 Magnitude-mode band-selective ge-2D HMBC without decoupling (shmbcgpndqf)

 Magnitude-mode CIGAR-HMBC without decoupling (hmbcacgplpndqf) Magnitude-mode CIGAR-HMBC with decoupling (hmbcacgplpqf) ge-2D 2J,3J HMBC, STAR-HMBC (hmbcacbigpl2ndqf) ge-2D HSMC (hmscetgpnd)

Also see:

o Measurement of long-range proton-carbon coupling constants o 2D COLOC Experiment o ADEQUATE Experiments

                                   

 ©2006: Bruker BioSpin , Teodor Parella 188

H

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

H H H H H H  

C C C N C C N C  

3JCH

 

2JCH        

hmbclpndqf  

   

1H d1 d2 <Drec

   

X d6 d0 d0

     

hmbcndprqf  

  

1 d1

presat pl9

 d6  

<Dl

<Drec

 

X d0 d0      

hmbcndpsqf  

  

1H d1

 

off-reson. presat ppll88

X sp6 l6

 d6  

<Dl

    

 d0 d0

<Drec

 

          

©2006: Bruker BioSpin , Teodor Parella 189

H

1

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

   

hmbcgpndqf  

   

1 d1 d6

<Drec 8

 

<Dl  

X d0 d0   

Gz

 

G1 G2 G3    

hmbcgplpndqf    

H d1 d2 <Drec

8  

<Dl  

X d6 d0 d0

  

Gz

 G1 G2 G3

 hmbcgpl2ndqf

   

1H d1 <Drec

8  

<Dl  

X l d6 d0 d0

  

Gz

 G4 G5 G6

 G1 G2 G3

 

 

shmbcgpndqf    

H d1 d6 8  

90º selective

X d0 d0

pp1111 sp1

Gz

 G1 G2 G3

   

©2006: Bruker BioSpin , Teodor Parella 190

1

z

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

hmbcacgplpqf    

H d1 <Drec

   

X l

 k*d0

G G8

     d6-k*d0

<Dl  

 d0 d0

 

 d6

GARP  

pl12

 

G4 G4  

G5 G6 G7 G8  

G1 G2 G3       

hmbcacgplpndqf  

-x  

H d1

  

<Drec 8

 

pp1144 sp3

X l

pp1144 sp3

<Dl  

d0 d0

 k*d0

Gz

d6-k*d0

 G4 G4

 G5 G6 G7 G8

 G9 G10

 G11

 G11

 G1 G2 G3

        

hmbcacbigpl2ndqf  

  

1H d1  8 d2 d2 8 8

<Drec

  

 d28+

 

 d20

 

 d20

 

 d28+

<Dl  d6

X l Kd0/2

kd0  

p14 sp3

Gz

kd0 -kd0    G7

 

 p14 sp3

 

-kd0  

p14 sp3

G8

Kd0/2 -kd0 d0 d0

 G4 G5 G6 G7 G8

 G1 G2 G3

        

©2006: Bruker BioSpin , Teodor Parella 191

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

hmscetgpnd    

1H d1

 

 d6/2 d2

<D1

 d2

 

 d6/2 d2

  <Drec

   

13C <D1

 d0

 

 d0 8 8

 pp1144 sp3

Gz

 pp1144 sp3

 pp2244 sp7

 

 G1 G1

 

       

 

         

©2006: Bruker BioSpin , Teodor Parella 192

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D EXPERIMENTS TO MEASURE LONG-RANGE PROTON-CARBON

COUPLING CONSTANTS                              

©2006: Bruker BioSpin , Teodor Parella 193

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0  

 

 

   

ge-2D HMBC-type experiments  

Phase-sensitive ge-2D HMBC using echo-antiecho (hmbcetgpnd) Phase-sensitive ge-2D HMBC using a two-fold low-pass J-filter (hmbcetgpl2nd)

Phase-sensitive ge-2D CT-HMBC using echo-antiecho (hmbcctetgpnd)

ge-2D J-HMBC using a two-fold low-pass J-filter (hmbcetgpjcl2nd)  

Long-range optimized ge-2D HSQC  

Phase-sensitive ge-2D long-range optimized HSQC (HSQMBC) (hsqcetgplrsp) Phase-sensitive ge-2D long-range optimized HSQC using G-BIRD (GBIRD-HSQMBC) (hsqcetgpjclrnd) ge-2D long-range optimized J-HSQC (EXSIDE) (hsqcetgplrjcsp)

 ge-2D HSQC-TOCSY type experiments

 ge-2D w1-filtered TOCSY using DIPSI-2 (HETLOC) (dipsi2etgpjcsix1) Phase-sensitive ge-2D HSQC-HECADE (hsqcdietgpjcndsisp)

 

  

Also see 2D HMBC and 2D HSQC-TOCSY experiments  

   

 

 

 

HSQC-TOCSY HMBC     

H H 1JCH

JHH JHH   H H

  H H H H

 C C C N C C C C N C

3JCH 2JCH

       

Others: HMQC-TOCSY, HECADE, HETLOC Two steps: 1JCH + JHH Only for protonated carbons In-phase Magnetization

Others: HSQMBC, EXSIDE, J-HMBC A single step: nJCH For all carbons Anti-phase Magnetization

               

©2006: Bruker BioSpin , Teodor Parella 194

H

G

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

       

HA  

 J-scaling factor of N  

N*nJ(HA-CB) CB oC    

oH  

     

hmbcetgpjcl2nd     

1 d1 d6/2-d0

<Drec

  

  

X d6/2-(1+n)*d0

 

  n*d0

<D  

d0

 

 d0 o o

 pp1144 sp3

z

 pp2244 sp7

 

G3 G4 G5  

 G1 G1

           

ppm 0

  

50   

100   

150   

200  

8 7 6 5 4 3 2  ppm

 

     

©2006: Bruker BioSpin , Teodor Parella 195

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

HA  

 J-scaling factor of N  

N*nJ(HA-CB) CB oC    

oH

       

hsqcetgplrjcsp  

 135º 45º  

 d6/4+

  d6/4+

  d6/4+

y  d6/4+

  <Drec

1H d1

13C

Gz

d2 d2  

     

pp1144 sp3

o n*d0  

 pp1122 sp2    pp1144 sp3

 

n*d0  

n*d0   pp1122 sp2    pp1144 sp3

 

n*d0  

 <D1

   

 d0 d0

   

 o o  pp2244 sp7

d6/4   pp1122 sp2    pp1144 sp3

d6/4 d6/4 d6/4  

pp1122 sp2

    

 GARP  

pl12

 

G3 G4 G4 G5 G5 G6 G1 G2 G4 G4 G5 G5  

                                  

©2006: Bruker BioSpin , Teodor Parella 196

z

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

hmbcetgpnd  

   

1H d1 d6 <Drec

  

CB oC

  13C

<D1

 d0

 

 d0 o o

 

 HA G oH

 pp2244 sp7

 G1 G1

     

hmbcetgpl2nd     

1H d1 <Drec

   

13C

<D  d6 d0 d0 o o

 pp2244 sp7

Gz  

G3 G4 G5  

 G1 G1

   

hmbcctetgpnd  

   

1H d1 d6+T-d0 T-d0 <Drec

   

13C <D1

 d0

 

 d0 o o

 pp2244 sp7

Gz

 

 G1 G1

    

©2006: Bruker BioSpin , Teodor Parella 197

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

           

CB oC   

 HA

oH         

hsqcetgplrsp    

1H d1 d6/2 d6/2 o o    

13C  

o d0  

d0 o o  

pp1144 sp3

Gz

pp2244 sp7

 G3 G2

G1 G1  

 hsqcetgpjclrnd

   

1H d1  

d6/2 d2 d2  

d6/2 p28 o o o    

13C  

d0 d0 o o  

pp1144 sp3

Gz

pp2244 sp7

 

G3 G3 G4 G2 G1

 

         

©2006: Bruker BioSpin , Teodor Parella 198

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

      

TOCSY  

HA oH HB

 

 

J-scaling factor of N 1J(HA-CA) HA oH  

   

1J(HA-CA) nJ(HB-CA)  

    

dipsi2etgpjcsix1    

1H d1

y  d4 d4 o

  d4 d4 d0

  o d2

  d2 o (1-k) kd0

-x d9

o o o

  <Drec

 

   

13C

 

 <D1

d0 DIPSI-2 (y)  

p6 pl10

 pp1144 sp3

Gz G2

G1

 pp1144 sp3  

 G2

 pp1144 sp3

 pp1144 pp1144 sp3 sp3  

G3 G3

          

ppm  

1  

2  

3  

4  

5  

6  

7  

8  

8 7 6 5 4 3  2 1 ppm

       

©2006: Bruker BioSpin , Teodor Parella 199

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

TOCSY  

HA oH HB

 

 

J-scaling factor of N 1J(HA-CA) CA oC  

   

1J(HA-CA) nJ(HB-CA)       

hsqcdietgpjcndsisp    

1H d1

y y

 d4 d4 d24 d24 d4

 <D1

 

 d0

d4 d2 d2

 d0

d9

DIPSI-2 (y) o o  

p6 pl10

 <Drec

 

13C o d0 d0 o o

 pp1144 sp3

Gz

 pp2244 sp7

 pp2244 sp7

 pp1144 sp3

 pp1144 sp3

 pp1144 sp3

 G3 G2

G1  

      

ppm   

40

 60

 80

 100

 120

 140  

7 6 5 4  3 2 ppm

 

      

©2006: Bruker BioSpin , Teodor Parella 200

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

2D ADEQUATE EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 201

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

 • 1,1-ADEQUATE:

 Phase-sensitive 1,1 ADEQUATE ( adeq11etgp ) Phase-sensitive 1,1 ADEQUATE using adiabatic pulse ( adeq11et gpsp) Phase-sensitive 1,1 ADEQUATE with refocusing ( adeq11etgprd ) Phase-sensitive 1,1 ADEQUATE with refocusing using adiabatic pulse ( adeq11etgprdsp )

 • 1,n-ADEQUATE:

 Phase-sensitive 1,n ADEQUATE ( adeq1netgp)

 • n,1-ADEQUATE:

 Phase-sensitive n,1 ADEQUATE ( adeqn1etgp)

 • n,n-ADEQUATE:

 Phase-sensitive n,n ADEQUATE ( adeqnnetgp)

                                            

©2006: Bruker BioSpin , Teodor Parella 202

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

H H H H H  

H 1JCH

C C C C C C C C 1JCC

   

H H H H H  

H 1JCH

C C C C C C C C 2JCC

 

  

H H H H H  

H 1JCH

C C C C C C C C 3JCC

  

2JCH

H H H H H H  

C C C C C C C C 1JCC

 3JCH

 

H H H H H H  

C C C C C C C C 1JCC

 

3JCH  

H H H H H H  

C C C C C C C C 2JCC

  

3JCH  

H H H H H H  

C C C C C C C C 3JCC

    

 ©2006: Bruker BioSpin , Teodor Parella 203

1

G

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

   

 adeq11etgp

y y

 

 <lrec

1H d1 d4 d4 d24 d24 d4 d4 8 8    

13C <l1 60º

d23   

Gz

d23 d0 d0 8 8 d23 d23 GARP

p112

 

G1 G2  

G3  

adeq11etgpsp y y

 

 <lrec

H d1 d4 d4 d24 d24 d4 d4 8 8    

13C <l1 60º

  

pp1144 sp3

z

d23   pp2244 sp7

d23 d0 d0 8 8  pp2244 sp7

d23 d23  

pp2244 sp7

  pp2244 sp7

 

 pp1144 sp3

GARP  

p112

 G1 G2

 

   

8 10 9

3' 1 OH 7 6 4 3 5 2 6' 4'  

ppm 40

 

50  

60  

70  

80 DQC  

90  

100  

110  

120  

 3.0 2.5 2.0 1.5 1.0 ppm

   

©2006: Bruker BioSpin , Teodor Parella 204

G

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

 adeq11etgprd

y y

 

 <lrec

1H d1 d4 d4 d24 d24 d4 d4 8 8    

13C

<l1  

  d23

 

  d23

120º  

 d0 d0 d23-d0

 

  d23 d0 8 8 GARP

 

p112

Gz

 

G1 G2

G3

 adeq11etgprdsp

y y

 

 <lrec

1H d1 d4 d4 d24 d24 d4 d4 8 8    

13C

<l1

 d23

 

  d23

120º

  

pp1144 sp3

z

  pp2244 sp7

d0 d0 8 8  

pp2244 sp7

d23-d0   pp2244 sp7

d23 d0   pp2244 sp7

  pp1144 sp3

GARP  

p112

 G1 G2

G3  

 

8 10 9

3' 1 OH 7 6 4 3 5 2 6' 4'  

ppm  

  

20   

30   

40   

50   

60   

70  

 

3.0 2.5 2.0 1.5 1.0 ppm   

©2006: Bruker BioSpin , Teodor Parella 205

1

H

H

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

adeq1netgp  

y y

 

 <lrec

1H d1 d4 d4 d24 d24 d4 d4 8 8  

13C

Gz

p28 <l  

 d23

   d23

   d0 d0 8

 

60º  8 d23 d23

GARP

p112

 G1 G2

 

G3      

adeqn1etgp   

 1 d1 d2

<lrec

8    

13C <l1 60º

d6-d2 d23 d23 8 d0 d0 8 d23 d23  

 

Gz

 

 G1 G2

 

    

adeqnnetgp   

 1 d1 d2

<lrec

8    

13C <l1 60º

d6-d2 d23 d23 8 d0 d0 8 d23 d23  

 

Gz

 

 G1 G2

        

©2006: Bruker BioSpin , Teodor Parella 206

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

DIFFUSION/DOSY EXPERIMENTS

 

                               

©2006: Bruker BioSpin , Teodor Parella 207

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

 

 

    

Conventional 1D:  

1D Stimulated Echo experiment (STE) (stegp1s1d) 1D Stimulated Echo experiment using bipolar gradients (stebpgp1s1d) 1D LED experiment (ledgp2s1d) 1D LED experiment using bipolar gradients (ledbpgp2s1d) 1D Double-Stimulated Echo Experiment (DSTE) (dstegp3s1d) 1D Double-Stimulated Echo Experiment (DSTE) using bipolar gradients (dstebpgp3s1d)

 1D Stimulated Echo experiment using bipolar gradients and WATERGATE (stebpgp1s191d)

 1D STE-INEPT experiment (stebpgpin1s1d)

 2D DOSY maps:

 

2D Stimulated Echo experiment (STE) (stegp1s) 2D Stimulated Echo experiment using bipolar gradients (stebpgp1s)

 2D Double-Stimulated Echo Experiment (DSTE) (dstegp3s) 2D Double-Stimulated Echo Experiment (DSTE) using bipolar gradients (dstebpgp3s) 2D LED experiment (ledgp2s) 2D LED experiment using bipolar gradients (ledbpgp2s)

 2D Stimulated Echo experiment using bipolar gradients and WATERGATE (stebpgp1s19)

 2D STE-INEPT experiment (stebpgpin1s)

 2D & 3D DOSY related experiments:

 3D DOSY-COSY using LED with bipolar gradients (ledbpgpco2s3d)

 2D DOSY-TOCSY with LED using bipolar gradients (ledbpgpml2s2d) 2D DOSY-TOCSY with LED using bipolar gradients and WATERGATE (ledbpgpml2s192d) 3D DOSY-TOCSY using LED with bipolar gradients (ledbpgpml2s3d)

 3D DOSY-NOESY using LED with bipolar gradients (ledbpgpno2s3d)

         

 

      

 ©2006: Bruker BioSpin , Teodor Parella 208

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

stegp1s  

stegp1s1d

stebpgp1s stebpgp1s1d

  

1H d1

   

Gz

 

 d20

1H d1    

Gz

 

 

 d20

G6 G7 G6 G6 G7 G6

G6 G6  

    

ledgp2s ledgp2s1d ledbpgp2s

ledbpgp2s1d  

 1H d1

   

Gz

 

 d20

d21  

1H d1    

G

 

 

 d20

 

d21

 G6 G7 G6 G8

z

G6 G7 G6 G8

G6 G6       

dstegp3s  

dstegp3s1d  

 1H d1 d21

 

d20  

Gz

d20  

  dstebpgp3s

G6 G7 G6 G6 G8 G6 G9 dstebpgp3s1d   

 1H d1 d21

 

d20  

Gz G6

G6 G7 G6 G6

d20

 G6G6 G6

G8 G6 G9  

    

©2006: Bruker BioSpin , Teodor Parella 209

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

 Peak

intensity

 

Gyromagnetic Constant

Diffusion Time (d20)

Gradient Duration

(p30)  

I=Ioexp(-Dy 2g2 2( - /3))  

 

Initial Peak

intensity

 Diffusion

Coefficient

Applied Gradient

g=Gmax*gpz6  

       

ln(I/Io )=-Dy2g2 2( - /3)       

 

Stokes-Einstein Equation    

Diffusion Coefficient

  

D=KT/6rrYRH

Hydrodinamic radius

 

  

 

Boltzmann Constant

 

Temperature Viscosity

 

   

ppm

-9.7  

-9.6  

-9.5  

-9.4  

-9.3  

-9.2  

-9.1  

-9.0  

-8.9  

7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 ppm

 ©2006: Bruker BioSpin , Teodor Parella 210

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

               

stebpgp1s19 stebpgp1s191d

   

1H d1  

d20  

Gz

G6 G7 G6

G6

 

   G1 G1

 

G6     

 stebpgpin1s1d stebpgpin1s

 

  

1H d1  

 13C

   d20

d4 d4 d3 d3  CPD pl12

  

Gz

G6 G7 G6

G6 G6                       

©2006: Bruker BioSpin , Teodor Parella 211

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

 ledbpgpco2s3d

   

1H d1 d21 d0

 d20

 

Gz

G6 G7 G6 G8

    G1G1

G6 G6  

  

ledbpgpml2s3d ledbpgpml2s2d

  

1H d1    

Gz

    d20

 d21 d0

d9

MLEV-17

p6 pl10

G6 G7 G6 G8

G6 G6  

  

ledbpgpml2s192d    

1H d1    

Gz

    d20

 d21 d0

d9

MLEV-17

p6 pl10

G6 G7 G6 G8 G1 G1

G6 G6      

ledbpgpno3s3d    

1H d1    

Gz

   d20

d21 d0

 d8

 

 G1

G6 G7 G6 G8 G1

G6 G6      

©2006: Bruker BioSpin , Teodor Parella 212

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

1D & 2D SATURATION TRANSFER DIFFERENCE (STD) EXPERIMENTS

 

                               

©2006: Bruker BioSpin , Teodor Parella 213

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 

 

   

 • 1D STD:

 1D STD (stddiff) 1D STD with spoil (stddiff.2) 1D STD with spoil and T2 filter (stddiff.3)

 

 • 1D STD with solvent suppression:

 1D STD using 3-9-19 WATERGATE (stddiffgp19) 1D STD with spoil using 3-9-19 WATERGATE (stddiffgp19.2) 1D STD with spoil and T2 filter using 3-9-19 WATERGATE (stddiffgp19.3)

1D STD using excitation scultping (stddiffesgp) 1D STD with spoil using excitation scultping (stddiffesgp.2) 1D STD with spoil and T2 filter using excitation scultping (stddiffesgp.3)

 

 

• 2D STD-TOCSY:  

2D STD-TOCSY (stdmlevph) 2D STD-TOCSY using 3-9-19 WATERGATE (stdmlevgpph19) 2D STD-TOCSY using excitation sculpting (stdmlevesgpph)

 

 

• 2D STD-NOESY:  

2D STD-NOESY with T2 filter in F2 (stdnoesygpph) 2D STD-NOESY with T2 filter in F1 and F2 (stdnoesygpph.2) 2D STD-NOESY using 3-9-19 WATERGATE with T2 filter in F2 (stdnoesygpph19) 2D STD-NOESY using 3-9-19 WATERGATE with T2 filter in F1 and F2 (stdnoesygpph19.2) 2D STD-NOESY using excitation sculpting with T2 filter in F2 (stdnoesyesgpph) 2D STD-NOESY using excitation sculpting with T2 filter in F1 and F2 (stdnoesyesgpph.2)

 

 

• 2D STD-HSQC:  

2D STD-HSQC using echo-antiecho (stdhsqcetgpsp) 2D STD-HSQC with sensitivity-improvement (stdhsqcetgpsisp)

       

 

 

              

©2006: Bruker BioSpin , Teodor Parella 214

G

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 stddiff

 Selective saturaton

  

f2 channel

90º    p13

time d20

sp3 stddiff.2  

  

f1 channel

l5 90º

 d1

    f2 channel  

    f1 channel

       

 y

 

 p17 pl10

 

Selective 90º

   

p13 sp3

l5

d1

 saturaton time d20

  

 90º

stddiff.3 z

  

   

f2 channel  

    

f1 channel  

  

Gz

       

 y

 

 p17 pl10

 

Selective 90º

   

p13 sp3

l5

d1

G1 saturaton

time d20

  

 90º   

CW

p29 pl29

 

G1                             

8 7 6 5 4 3 2 1 ppm    

©2006: Bruker BioSpin , Teodor Parella 215

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

stddiffgp19  

Selective saturaton   

f2 channel      

f1 channel

90º    

p13 sp3

l5  d1

 

     90º

time d20       

 

  

Gz

 G1 G1

    

stddiffgp19.2  

Selective saturaton  

 f2 channel

 

   

y

90º    p13 sp3

l5

 

     90º

time d20

f1 channel  

  

Gz

d1  p17 pl10

 

G1 G2 G2  

    

stddiffgp19.3   

Selective saturaton  

 f2 channel

 

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

 

     90º

time d20       

CW

p29 pl29

 

G1 G2 G2     

 ©2006: Bruker BioSpin , Teodor Parella 216

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

    

stddiffesgp  

Selective saturaton   

f2 channel      

f1 channel  

  

Gz

90º    

p13 sp3

l5

d1

 

     90º

time d20

 

   -x -x

   pp1122 sp1

 G1 G1G2 G2

   

 stddiffesgp.2

 Selective saturaton

 

 f2 channel

 

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

 

     90º

time d20   

 -x -x

   pp1122 sp1

 

G1 G2 G2G3 G3  

    

stddiffesgp.3   

Selective saturaton  

 f2 channel

 

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

 

     90º

time d20       

CW

p29 pl29

 

     -x -x

   pp1122 sp1

 

G1 G2 G2G3 G3  

     

©2006: Bruker BioSpin , Teodor Parella 217

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

   

stdmlevph  

Selective saturaton  

 f2 channel

 

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

 

     90º

time d20      

d0

     

 d9

MLEV-17

p6 pl10

 

G1    

stdmlevgpph19  

Selective saturaton   

f2 channel  

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

 

     90º

time d20      

d0

     

 d9

MLEV-17

p6 pl10

 

G1 G2 G2        

stdmlevesgpph  

Selective saturaton  

 f2 channel

 

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

 

     90º

time d20      

d0

     

 d9

MLEV-17

p6 pl10

 

     -x -x

   pp1122 sp1

 

G1 G2 G2G3 G3      

 ©2006: Bruker BioSpin , Teodor Parella 218

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

            

stdnoesygpph  

Selective saturaton  

 f2 channel

 

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

 

     90º

time d20      

d0

       

 CW

p29 d8 pl29  

G2  

G1 G2          

Selective

stdnoesygpph.2

 

  

f2 channel  

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

saturaton time d20

   90º  

d0 CW

p29 pl29

 

        

CW p29

d8 pl29  

G2  

G1 G2                     

©2006: Bruker BioSpin , Teodor Parella 219

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

           

stdnoesygpph19  

Selective saturaton  

 f2 channel

 

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

 

     90º

time d20      

d0

        

CW p29

d8 pl29  

G2  

G1 G2  G3 G3

         

Selective

stdnoesygpph19.2

 

  

f2 channel  

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

saturaton time d20

   90º  

d0 CW

p29 pl29

 

        

CW p29

d8 pl29  

G2  

G1 G2  G3 G3

                   

 ©2006: Bruker BioSpin , Teodor Parella 220

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

            

stdnoesyesgpph  

Selective saturaton  

 f2 channel

 

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

 

     90º

time d20      

d0

       

 CW p29

d8 pl29  

G2

 

     -x -x

   pp1122 sp1

 G1 G2

 

G3 G3G4 G4

         

Selective

stdnoesyesgpph.2

 

  

f2 channel  

    

f1 channel  

  

Gz

       

y  

 p17 pl10

90º    

p13 sp3

l5

d1

saturaton time d20

   90º  

d0 CW

p29 pl29

 

        

CW p29

d8 pl29  

G2

      -x -x

   pp1122 sp1

 G1 G2

 

G3 G3G4 G4

                    

©2006: Bruker BioSpin , Teodor Parella 221

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

        

Selective 90º

stdhsqcetgpsp

saturaton time d20

   

1H d1

p13 sp3

l5

  

 d4 d4

 y

 p28

  

 d4 d4

 

  <lrec

   

13C  

  

Gz

 

    pp1144 sp3

<l1   d0 d0

 

    pp2244 sp7

 

    pp1144 sp3

   GARP

pl12

 

G2

G1  

         

 Selective

90º

stdhsqcetgpsisp

 

  

p13 sp3 y y

l5

  <lrec

1H d1 d4 d4 p28 d24 d24 d4 d4    

13C

  

 Gz

 

    pp1144 sp3

<l1   d0 d0

 

    pp2244 sp7

 

    pp2244 sp7

'I'  

    pp1144 sp3

   GARP  pl12

 G2

G1                

©2006: Bruker BioSpin , Teodor Parella 222

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

CLEANEX EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 223

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

       

1D CLEANEX using 3-9-19 WATERGATE (zgcxgp19) 1D CLEANEX using excitation sculpting (zgcxesgp) 2D CLEANEX-Fast HSQC using 3-9-19 WATERGATE (fhsqccxf3gpph) 2D CLEANEX-TROSY using 3-9-19 WATERGATE (trosycxf3gpphsi19)

           

zgcxgp19     

 1H d1

 

  

Gz

Selective H2O 180º

 o o  

p7 sp21

    

 p10 pl27 d31

Selective H2O 90º

 

o o  p15 sp22

 

G1 G1 G2 G2  

         

zgcxesgp   

Selective H2O 180º

Selective H2O 90º

 

 -x -x

 1H d1

 o o  

p7 p10

 

  p15

 o o o o  pp1122

sp21

Gz

pl27 d31

sp22 sp1

 

G1 G1 G2 G2G3 G3              

©2006: Bruker BioSpin , Teodor Parella 224

G

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

            

fhsqccxf3gpph  

   

 1H d1

 

  

15N

 

 13C

Selective H2O 180º

 o o  

p7 sp21

    

 p10 pl27 d31

    d26

    d26

 y  

   

<D1  

o

        d0 d0

 

 -x

 

 d26 d26

 

  o

   

<Drec      GARP  

pl16

optional  

pp1144 sp3

z  

G4 G4 G1 G1 G2 G2 G3 G3  

       

trosycxf3gpphsi19  

 Selective

H2O 180º

 y -y y

  <Drec

1H d1 o o  

p7 p10

d26 d26 d24 d24 d26 d26

 

 15N

sp21 pl27 d31

<D1 y  

d0  

  

Gz

 G4 G4 G1 G1

 

 G2 G2

 

 G3 G3

                

©2006: Bruker BioSpin , Teodor Parella 225

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

                                                                           

©2006: Bruker BioSpin , Teodor Parella 226

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

LC-NMR EXPERIMENTS                                   

©2006: Bruker BioSpin , Teodor Parella 227

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

 

 

 1D 1H spectrum

 o 1D 1H with double presaturation (lc1prf2 | LC1D12) o 1D 1H with triple presaturation (lc1prft) o 1D 1H with WET (wet) o 1D 1H with WET and CW decoupling on f2 during WET and ACQ ( wetdc | LC1DWTDC) o 1D 1H with WET and CW decoupling on f2 during WET ( wetdw) o 1D 1H WET solvent suppression with shape pulse and C -13 decoupling on f2 during

WET and AQ for LC isocratic runs ( lc2wetdc) o 1D 1H WET solvent suppression with shape pulse and C -13 decoupling on f2 during

WET and AQ with intermediate preparation scan into second dataset for LC gradient runs with updated shapes (lc2wetdcus | LC2DWTUS)

 1D NOESY

 o 1D NOESY with presaturation ( noesypr1d) o 1D NOESY with presaturation and CW decoupling on f2 ( lc1pncw) o 1D NOESY with double presaturation and CW decoupling on f2 ( lc1pncwfd) o 1D NOESY with presaturation using shaped pulse and CW decoupling on f2

(lc1pncwps) o 1D NOESY with double presaturation ( lc1pnf2) o 1D NOESY with multiple presaturation (lc1pnfr) o 1D NOESY with triple presaturation ( lc1pnft) o 1D NOESY with presaturation using shaped pulse ( lc1pnps)

 Pseudo-2D-sequence

 o Pseudo-2D-sequence for lc-nmr on flow detection (lc2) o Pseudo-2D-sequence for lc-nmr on flow detection with power-gated decoupling (lc2pg) o Pseudo-2D-sequence for lc-nmr on flow detection with presaturation (lc2pn) o Pseudo-2D-sequence for lc-nmr on flow detection with double presaturation (lc2pnf2) o Pseudo-2D-sequence for lc-nmr on flow detection with solvent gradients (lc2pnf2ul) o Pseudo-2D-sequence for lc-nmr on flow detection with solvent gradients (lc2pnpl) o Pseudo-2D-sequence for lc-nmr on flow detection (lc2pnps) o Pseudo-2D-sequence for lc-nmr on flow detection with solvent gradients (lc2pnul) o Pseudo-2D-sequence for lc-nmr on flow detection with presaturation (lc2pr) o Pseudo-2D-sequence for lc-nmr on flow detection with double presaturation (lc2prf2) o Pseudo-2D-sequence for lc-nmr on flow detection with presaturation using shape pulse

(lc2ps)  

2D homonuclear J-resolved  

o 2D J-resolved with double presaturation and cw-decoupling on f2 (lcjrescwfdprqf) o 2D J-resolved with presaturation and cw-decoupling on f2 (lcjrescwprqf) o 2D J-resolved with presaturation using shape pulse and cw-decoupling on f2

(lcjrescwpsqf) o 2D J-resolved with double presaturation (lcjresf2prqf) o 2D J-resolved with presaturation (lcjresprqf) o 2D J-resolved with presaturation using shape pulse (lcjrespsqf)

 2D TOCSY

 o 2D TOCSY with double presaturation and cw -decoupling on f2 (lcmlevcwfdpcph) o 2D TOCSY with presaturation and cw -decoupling on f2 (lcmlevcwpcphps) o 2D TOCSY with double presaturation using composite pulse ( lcmlevf2pcph) o 2D TOCSY with double presaturation ( lcmlevf2phpr | LCML12)

    

©2006: Bruker BioSpin , Teodor Parella 228

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

      

o 2D TOCSY with presaturation using shape pulse and composite pulse ( lcmlevpcphps) o 2D TOCSY with presaturation u sing composite pulse (lcmlevpcph)

 2D Experiments using WET

 o 2D COSY using WET ( cosydcphwt | COSYDCPHWT) o 2D TOCSY using WET ( mlevdcphwt | MLEVDCPHWT) o 2D HSQC using WET ( hsqcetgpsiwt | HSQCETGPSIWT)

 2D Experiments using single/multiple presaturation using shape pulse

 o Phase-sensitive 2D COSY using using single/multiple presaturation (cosycwphps |

COSYCWPHPS) o Phase-sensitive 2D HSQC using using single/multiple presaturation (hsqcphps) o 2D HMBC using using single/multiple presaturation (hmbcndpsqf)

    

Related experiments:  

o Also see 1D Solvent suppression                                            

©2006: Bruker BioSpin , Teodor Parella 229

H

1

1

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

lc2  

 d1

      

lc2pr lc2ps  

 

1H d1

presat pl9

1H d1

presat off-reson.

    

 lc2pg

 H CPD

pl13 pl12  

13C d1       

     

channel f2 1H

lc1prf2 lc2prf2  presat pl21

 

1H d1

presat pl9

     

channel f3

channel f2

lc1prft  

H presat pl22

H presat pl21

 

1 d1

presat pl9

 

      

©2006: Bruker BioSpin , Teodor Parella 230

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

lc2pn

lc2pnul

lc2pnps lc1pnps

 

 

1H d1

presat pl9

d8

presat 1H

d1

presat off-reson.

d8

presat off-reson.

 

      

1H d1

lc1pnfr  

 d8

pl9 MMuullttiippllee presat

pl9

MMuullttiippllee presat

 

 

lc1pncw lc1pncwps  

13C CW 13C CW

pl21 pl21  

1H d1

presat pl9

 

d8

presat 1H

d1

presat off-reson.

 

d8

presat off-reson.

 

   

lc2pnf2

lc1pnf2

lc2pnf2ul  

cchhaannnneell ff22 1H   

1H

 

presat pl21

 

d1

presat pl9

 

presat  

 d8

presat

   

 lc1pnft lc1pncwfd

 

channel f3 1H  

presat pl22

 

presat 13C  

CW

pl21 channel f2 1H presat presat channel f3 1H presat presat

pl21 pl22  

1H d1

presat pl9

 d8

presat

 

1H d1

presat pl9

 

d8

presat

      

 ©2006: Bruker BioSpin , Teodor Parella 231

1

1

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

     

lcjrescwprqf   

13C   

1H

  

 d1

presat

 

   d0 d0

 

CW

pl21

   

 lcjrescwpsqf

  

13C

  

1H

  

 d1

presat off-reson.

 

   d0 d0

 

CW

pl21

    

lcjresf2prqf  

channel f2 H  

  

1H

 presat pl21

 d1

presat pl9

   

 d0 d0

     

 lcjrescwfdprqf

 

 13C

 

channel f3 H presat pl22

 

CW

pl21

 

1H d1

presat pl9

 d0 d0

              

©2006: Bruker BioSpin , Teodor Parella 232

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Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

  

lcmlevpcph  

 d9

1 d1 d0

H presat MLEV-17 pl9 p6

pl10  

 lcmlevpcphps

 

d9

1 d1 d0

H presat MLEV-17

off-reson. p6 pl10

  

lcmlevf2phpr  

channel f2 1H  

  

1H

 

presat pl21

d9 d1 d0

presat MLEV-17 pl9 p6

pl10  

 lcmlevf2pcph

 

channel f2 1H  

  

1

 

presat pl21

d9 d1 d0

H presat MLEV-17 pl9 p6

pl10   

lcmlevcwpcphps  

13C  

 d1 d0

 

CW

pl21 d9

H presat MLEV-17

off-reson. p6 pl10

  

 lcmlevcwfdpcph

 

    

channel f3

13C

 1H

 

 1

  

 presat pl22

d1 d0 d9

 

CW

pl21

H presat MLEV-17 pl9 p6

pl10

 ©2006: Bruker BioSpin , Teodor Parella 233

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

       

cosydcphwt   

 1H d1

p11 y y y d0

13C

Gz

sp7 sp8 sp9 sp10  

      G21 G22 G23 G24

   GARP  

pl12

      

mlevdcphwt   

 1H d1

p11 y y y d0

 

d9  MLEV-17

 

sp7 sp8 sp9 sp10  

13C GARP  

pl12

p6 pl10

 

Gz

 

G21 G22 G23 G24    

hsqcetgpsiwt   

  

1H d1

 p11

y y  

d4 d4 p28 d24 d24

 

  d4 d4 8 8

 <!rec

   

13C  

 15N

sp7 sp8 sp9 sp10  

 GARP

 

pl12

 optional

 <!1

   d0 d0 8 8

 'I'

    GARP

pl12

  

Gz

 

G21 G22 G23 G24 G2 G1

         

©2006: Bruker BioSpin , Teodor Parella 234

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

BASIC SOLID-STATE NMR EXPERIMENTS

 

                               

©2006: Bruker BioSpin , Teodor Parella 235

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Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

     

1D one-pulse High power decoupling (hpdec) 1D CP (cp) 1D CP (cpnqs) 1D Sideband suppression with SELTICS ( cpseltics) 1D CPMAS with total sideband suppression using TOSS ( cptossa) 1D CPMAS with total sideband suppression using TOSS ( cptossb)

    

 hpdec

 

  

d1 I

 

  

S CW   

cp cpnqs   

1H d1

   

13C

 CW CW

p15   CW

1H d1    13C

 CW

p15   CW

     d20

 CW

   d20

  

 cpseltics

  

1H d1    

13C

 CW

p15   CW

 CW

   DELTA

   

cptossb cptossa

   

H d1  CW CW

p15  

13C del1 CW

del2 del3 del4

       

©2006: Bruker BioSpin , Teodor Parella 236

 

Pulse Program Catalogue NMRGuide 4.1 - Topspin 2.0

 

        

BRUKER PULSE PROGRAM

CATALOGUE            

NMRGuide       

APPENDIX                                   

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Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

 

  ;Pulprog.info ;avance-version (05/05/02) ; ;$CLASS=HighRes Info ;$COMMENT=

  ;For a pulseprogram the first characters (usually up to 6, but ;sometimes more) specify the type of experiment, e.g. DEPT, COSY, ;NOESY etc.. Further properties of the pulseprogram are ;indicated by a two-character code, which is added to the name ;in alphabetical order. For 2D experiments the mode (absolute value, ;phase sensitive or echo-antischo) is always indicated. H- or X- ;decoupling is assumed to be default for heteronuclear experiments, ;but not for homonuclear ones (except inad). ;In case of redundant information some two-character codes may be ;ommitted. ; ;The two-character codes used are the following:

  ;ar experiment for aromatic residues ;at adiabatic TOCSY ;bi with bird pulse for homonuclear J-decoupling ;bp using bipolar gradients ;cc cross correlation experiment ;cp with composite pulse ;ct constant time ;cw decoupling using cw command ;cx using CLEANEX_PM ;dc decoupling using cpd command ;df double quantum filter ;di with DIPSI mixing sequence ;dh homonuclear decoupling in indirect dimension ;dw decoupling using cpd command only during wet sequence ;dq double quantum coherence ;ea phase sensitive using Echo/Antiecho method ;ec with E.COSY transfer ;ed with multiplicity editing ;es excitation sculpting ;et phase sensitive using Echo/Antiecho-TPPI method ;fb using f2 - and f3 - channel ;fd using f1 - and f3 - channel (for presaturation) ;fr with presaturation using a frequency list ;ft using f1 -, f2 - and f3 - channel (for presaturation) ;fh F-19 observe with H-1 decoupling ;fp using a flip-back pulse ;fl for F-19 ecoupler ;f2 using f2 - channel (for presaturation) ;f3 using f3 - instead of f2 - channel ;f4 using f4 - instead of f2 - channel ;gd gated decoupling using cpd command ;ge gradient echo experiment ;gp using gradients with ":gp" syntax ;gr using gradients ;gs using shaped gradients ;hb hydrogen bond experiment ;hc homodecoupling of a region using a cpd-sequence ;hd homodecoupling ;hf H-1 observe with F-19 decoupling ;hs with homospoil pulse ;ia InPhase-AntiPhase (IPAP) experiment ;ig inverse gated ;ii using inverse (invi/HSQC) sequence ;im with incremented mixing time ;i4 using inverse (inv4/HMQC) sequence ;jc for determination of J coupling constant ;jd homonuclear J-decoupled ;jr with jump-return pulse ;lp with low-pass J-filter ;lq with Q-switching (low Q) ;lr for long-range couplings ;l2 with two-fold low-pass J-filter ;mf multiple quantum filter ;ml with MLEV mixing sequence

   

© 2006 BRUKER Biospin, Teodor Parella. 238

 

Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

 

  ;mq using multiple quantum ;nd no decoupling ;no with NOESY mixing sequence ;pc with presaturation and composite pulse ;pg power-gated ;ph phase sensitive using States-TPPI, TPPI, States or QSEC ;pl preparing a frequency list ;pn with presaturation using a 1D NOESY sequence ;pp using purge pulses ;pr with presaturation ;ps with presaturation using a shaped pulse ;qf absolute value mode ;qn for QNP-operation ;qs phase sensitive using qseq-mode ;rd refocussed ;rl with relay transfer ;rs with radiation damping suppression using gradients ;ru using radiation damping compensation unit ;rv with random variation ;r2 with 2 step relay transfer ;r3 with 3 step relay transfer ;se spin echo experiment ;sh phase sensitive using States et al. method ;si sensitivity improved ;sm simultaneous evolution of X and Y chemical shift ;sp using a shaped pulse ;sq using single quantum ;ss spin-state selective experiment ;st phase sensitive using States-TPPI method ;sy symmetric sequence ;s3 S3E experiment ;tf triple quantum filter ;tp phase sensitive using TPPI ;tr using TROSY sequence ;tz zeroquantum (ZQ) TROSY ;ul using a frequency list ;us updating shapes ;wg watergate using a soft-hard-soft sequence ;wt with WET watersuppression ;w5 watergate using W5 pulse ;xf x-filter experiments ;xy with XY CPMG sequence ;x1 x-filter in F1 ;x2 x-filter in F2 ;x3 x-filter in F3 ;zf with z-filter ;zq zero quantum coherence ;zs using a gradient/rf spoil pulse ;1d 1D version ;1s using 1 spoil gradients ;11 using 1-1 pulse ;19 using 3-9-19 pulse ;2h using 2H lockswitch unit ;2s using 2 spoil gradients ;3d 3D sequence ;3s using 3 spoil gradients ;30 using a 30 degree flip angle ;45 using a 45 degree flip angle ;90 using a 90 degree flip angle ;135 using a 135 degree flip angle

  ;Typical experiment names would be: ; cosy, dept, dipsi2, hmbc, hmqc, hoesy, hsqc, inad, inept, ; mlev, noesy, roesy or trosy.

  ;Inverse correlations are denoted as hmbc, hmqc or hsqc. ; Experiments with a BIRD sequence in the beginning ; also contain a bi in the name.

  ;1D experiments, which are analogues of 2D experiments by virtue of ; a selective pulse, start with sel. ;Semiselective 2D experiments have the same name as the unselective

   

© 2006 BRUKER Biospin, Teodor Parella. 239

 

Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

 

  ; version but with an s at the beginning: ; ; scosyph <-> cosyph.

  ;A phase-sensitive (States-TPPI, TPPI etc.) NOESY experiment with ; presaturation would then be: ; ; noesy + ph + pr = noesyphpr.

  ;In the other direction the pulseprogram hmbcgplpndqf would be ; ; hmbc + gp + lp + nd + qf ; ; and therefor an: ; ; inverse correlation for long-range couplings (HMBC) with ; coherence selection using gradients with ":gp" syntax, ; low-pass J-filter, ; no decoupling ; in absolute value mode.

 

   ;The nomenclature of parameters is described in Pulprog.info.

 

  ;Comments like: ; ; ;avance-version ; ;begin ; ;end ; ; with ( = MLEV17, DIPSI2, ...) ; ;are evaluated by NMRSIM for the pulseprogram display and should ;therefor not be removed. The syntax for begin/end statements allows ;characters, numbers and '_'. Arithmetic operators must not be used. ; ; ;The comments: ; ;preprocessor-flags-start ; ;preprocessor-flags-end ; ;are also evaluated to identify flags used in the pulseprogram and ;must also not be removed.

 

  ;$Id: $

 

                      

© 2006 BRUKER Biospin, Teodor Parella. 240

 

Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

 

  ;Param.info ;avance-version (05/10/24) ; ;The following convention is used for power levels, pulses, delays ;and loop counters throughout the microprograms: ; ;$CLASS=HighRes Info ;$COMMENT=

 

 ;pl0 : ;pl1 : f1 channel - power level for pulse (default) {all, PL90[F1]} ;pl2 : f2 channel - power level for pulse (default) {all, PL90[F2]} ;pl3 : f3 channel - power level for pulse (default) {all, PL90[F3]} ;pl4 : f4 channel - power level for pulse (default) {all, PL90[F4]} ;pl5 : f5 channel - power level for pulse (default) {} ;pl6 : f6 channel - power level for pulse (default) {} ;pl7 : f7 channel - power level for pulse (default) {} ;pl8 : f8 channel - power level for pulse (default) {} ;pl9 : f1 channel - power level for presaturation {default+lcnmr+triple+triple2+triple_na, PLCW[F1]} ;pl10: f1 channel - power level for TOCSY-spinlock {all, PLTOC[F1]} ;pl11: f1 channel - power level for ROESY-spinlock {all, PLROE[F1]} ;pl12: f2 channel - power level for CPD/BB decoupling {all, PLCPDP[F2]} ;pl13: f2 channel - power level for second CPD/BB decoupling {default+lcnmr+triple_c, PLCPD2[F2]} ; or f2 channel - power level for Cbeta/CO decoupling {triple+triple2, PLSH13[F2]} ;pl14: f2 channel - power level for cw saturation {default, PLNOE[F2]} ; or f2 channel - power level for cw saturation {triple+triple2, PLCW[F2]} ; or f2 channel - power level for low power decoupling {lcnmr, PLUSER1[F2]} ;pl15: f2 channel - power level for TOCSY-spinlock {all, PLTOC[F2]} ;pl16: f3 channel - power level for CPD/BB decoupling {all, PLCPDP[F3]} ;pl17: f4 channel - power level for CPD/BB decoupling {all, PLCPDP[F4]} ;pl18: f1 channel - power level for 3-9-19-pulse (watergate) {default+lcnmr+triple+triple2+triple_na, PL90[F1]} ;pl19: f1 channel - power level for CPD/BB decoupling {default+lcnmr+triple+triple2+triple_na, PLCPDP[F1]} ;pl20: f1 channel - power level for Dante-z pulse {} ; or f2 channel - power level for TOCSY-spinlock (higher sel.) {triple_na, PLUSER5[F2]} ;pl21: f2 channel - power level for presaturation {default+lcnmr, PLCW[F2]} ;pl22: f3 channel - power level for presaturation {lcnmr, PLCW[F3]} ; or f3 channel - power level for TOCSY-spinlock (higher sel.) {triple_na, PLUSER4[F3]} ;pl23: f3 channel - power level for TOCSY-spinlock {default+lcnmr+triple+triple_c, PLTOC[F3]} ; or f3 channel - power level for Rexchange spinlock {triple2, PLUSER2{[F3]} ; or f3 channel - power level for TOCSY-spinlock {triple_na, PLUSER3[F3]} ;pl24: f2 channel - power level for hd/hc decoupling {all, PLHD[F2]} ;pl25: f1 channel - power level for TOCSY spinlock (higher sel.) {triple_na, PLUSER3[F1]} ; or f3 channel - power level for T1rho spinlock {triple+triple2, PLUSER1[F3]} ;pl26: f2 channel - power level for cw decoupling {lcnmr, PLCPDP[F2]-18} ; or f2 channel - power level for TOCSY spinlock (higher sel. II) {triple_na, PLUSER3[F2]} ;pl27: f1 channel - power level for pulsed ROESY-spinlock {default, PLROE[F1]} ; or f1 channel - power level for cleanex spinlock {triple2, PLUSER1[F1]} ; or f2 channel - power level for TOCSY spinlock (higher sel. III) {triple_na, PLUSER4[F2]} ;pl28: f2 channel - power level for selective Ca or CO decoupling {triple+triple2, PLSH10[F2]} ; or f2 channel - power level for selective decoupling {triple_na, PLSH6U[F2]} ;pl29: f2 channel - power level for simultaneous Ca and CO decoupling {triple2, PLSH14[F2]} ;pl30: f2 channel - power level for bilev decoupling {default+triple+triple2+triple_na, PLCPDP[F2]} ;pl31: f2 channel - power level for bilev decoupling {default+triple+triple2+triple_na, PLUSER2[F2]}

  ;sp0 : f1 channel - shaped pulse 180 degree (adiabatic TOCSY) {} ; or f2 channel - shaped pulse 180 degree (two-fold modulated) {triple_na, PLSH7U[F2]} ;sp1 : f1 channel - shaped pulse for selective excitation {default, PLSH1[F1]} ; or f1 channel - shaped pulse for water flipback {triple+triple2+triple_na, PLSH8[F1]} ;sp2 : f1 channel - shaped pulse 180 degree {default, PLSH2[F1]} ; or f2 channel - shaped pulse 90 degree (on resonance) {triple+triple2, PLSH4[F2]} ; or f2 channel - shaped pulse 90 degree (on resonance) {triple_na, PLSH1U[F2]} ;sp3 : f2 channel - shaped pulse 180 degree (adiabatic) {default, PLSH3[F2]} ; or f2 channel - shaped pulse 180 degree (on resonance) {triple+triple2, PLSH6[F2]}

 

  

2006 BRUKER Biospin, Teodor Parella. 241

 

Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

 

  ; or f2 channel - shaped pulse 180 degree (on resonance) {triple_na, PLSH3U[F2]} ;sp4 : f2 channel - shaped pulse 90 degree (off resonance) {triple+triple2, PLSH4[F2]} ;sp5 : f2 channel - shaped pulse 180 degree (off resonance) {triple+triple2, PLSH6[F2]} ; or f2 channel - shaped pulse 180 degree (off resonance) {triple_na, PLSH3U[F2]} ;sp6 : f1 channel - shaped pulse for presaturation {default+lcnmr+triple+triple2+triple_na, PLSH7[F1]} ;sp7 : f1 channel - shaped pulse for wet {lcnmr, PLSH3[F1]+0.87} ; or f1 channel - shaped pulse 180 degree (adiabatic) {triple_c, PLSH13[F1]} ; or f2 channel - shaped pulse 180 degree (adiabatic) {default, PLSH2[F2]} ; or f2 channel - shaped pulse 180 degree (off resonance2) {triple+triple2, PLSH6[F2]} ; or f2 channel - shaped pulse 180 degree (off resonance2) {triple_na, PLSH3U[F2]} ;sp8 : f1 channel - shaped pulse for wet {lcnmr, PLSH3[F1]-1.04} ; or f2 channel - shaped pulse 90 degree (on res., time reversed) {triple+triple2, PLSH5[F2]} ; or f2 channel - shaped pulse 90 degree (on res., time reversed) {triple_na, PLSH2U[F2]} ;sp9 : f1 channel - shaped pulse for wet {lcnmr, PLSH3[F1]+2.27} ; or f2 channel - shaped pulse 180 degree (higher selectivity) {triple+triple2, PLSH9[F2]} ; or f3 channel - shaped pulse 180 degree (on resonance) {triple_na, PLSH1U[F3]} ;sp10: f1 channel - shaped pulse for tilted ROESY {} ; or f1 channel - shaped pulse for wet {lcnmr, PLSH3[F1]-5.05} ; or f2 channel - shaped pulse 90 degree (higher selectivity) {triple+triple2, PLSH7[F2]} ; or f2 channel - shaped pulse 90 degree (higher selectivity) {triple_na, PLSH4U[F2]} ;sp11: f1 channel - shaped pulse for wet2 {} ; or f1 channel - shaped pulse for water flipback {default, PLSH8[F1]} ; or f1 channel - shaped pulse for water flipback2 {triple+triple2+triple_na, PLSH9[F1]} ; or f2 channel - shaped pulse for water flipback {triple_c, PLSH16[F2]} ;sp12: f1 channel - shaped pulse for wet2 {} ; or f2 channel - shaped pulse 90 degree (higher sel., time rev.) {triple+triple2, PLSH8[F2]} ; or f2 channel - shaped pulse 90 degree (higher sel., time rev.) {triple_na, PLSH5U[F2]} ;sp13: f1 channel - shaped pulse for wet2 {} ; or f1 channel - shaped pulse 180 degree (adiabatic) {triple_c, PLSH12[F1]} ; or f2 channel - shaped pulse 180 degree (adiabatic) {triple+triple2+triple_na, PLSH3[F2]} ;sp14: f1 channel - shaped pulse for wet2 {} ; or f2 channel - shaped pulse 180 degree (adiabatic bilev decoupling) {default+triple+triple2, PLSH12[F2]} ; or f3 channel - shaped pulse 180 degree (adiabatic) {triple_na, PLSH2U[F3]} ;sp15: f2 channel - shaped pulse 180 degree for decoupling (Ca or CO) {triple, PLSH10[F2]} ; or f2 channel - shaped pulse 180 degree for decoupling (Cbeta) {triple2, PLSH13[F2]} ; or f2 channel - shaped pulse 180 degree for decoupling (C') {triple_na, PLSH6U[F2]} ;sp16: f2 channel - shaped pulse 180 degree (higher sel., off res.) {triple+triple2, PLSH9[F2]} ;sp17: f2 channel - shaped pulse 180 degree (higher sel., off res.) {triple+triple2, PLSH9[F2]} ;sp18: f2 channel - shaped pulse 180 degree (adiabatic matched sweep) {default+triple, PLSH15[F2]} ;sp19: f1 channel - shaped pulse for wet {default, PLSH3[F1]+0.87} ; or f2 channel - shaped pulse 90 degree (NH) {triple_c, PLSH14[F2]} ; or f3 channel - shaped pulse 90 degree (T1rho, adiabatic ramp up) {triple2, PLSH1[F3]} ;sp20: f1 channel - shaped pulse for wet {default, PLSH3[F1]-1.04} ; or f2 channel - shaped pulse 90 degree (NH, time reversed) {triple_c, PLSH15[F2]} ; or f3 channel - shaped pulse 90 degree (T1rho, adiabatic ramp down) {triple2, PLSH2[F3]} ;sp21: f1 channel - shaped pulse for wet {default, PLSH3[F1]+2.27} ; or f1 channel - shaped pulse 180 degree (cleanex, H2O) {triple2, PLSH11[F1]} ;sp22: f1 channel - shaped pulse for wet {default, PLSH3[F1]-5.05} ; or f1 channel - shaped pulse 90 degree (cleanex, H2O) {triple2, PLSH10[F1]} ; or f1 channel - shaped pulse 180 degree (off resonance) {triple_c, PLSH6[F1]} ;sp23: f1 channel - shaped pulse 90 degree (on resonance) {triple_c, PLSH4[F1]} ; or f1 channel - shaped pulse 180 degree (off resonance) {triple_na, PLSH1U[F1]} ;sp24: f1 channel - shaped pulse 180 degree (on resonance) {triple_c, PLSH6[F1]} ; or f1 channel - shaped pulse 180 degree (off resonance2) {triple_na, PLSH1U[F1]} ;sp25: f1 channel - shaped pulse 90 degree (on res., time reversed) {triple_c, PLSH5[F1]} ; or f2 channel - shaped pulse 180 degree (higher selectivity) {triple_na, PLSH6U[F2]} ;sp26: f1 channel - shaped pulse 180 degree (off resonance) {triple_c, PLSH6[F1]} ;sp27: f1 channel - shaped pulse 180 degree (off resonance) {triple_c, PLSH6[F1]} ;sp28: f1 channel - shaped pulse 180 degree (higher selectivity) {triple_c, PLSH14[F1]} ;sp29: f1 channel - shaped pulse 180 degree (off resonance) {triple_c, PLSH6[F1]} ; or f1 channel - shaped pulse 180 degree (adiabatic sweep: z-spoil) {default, PLSH16[F1]}

   

2006 BRUKER Biospin, Teodor Parella. 242

 

Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

 

  ;sp30: f1 channel - shaped pulse 180 degree (sim. Ca + CO) {triple_c, PLSH15[F1]} ; or f2 channel - shaped pulse 180 degree for decoupling (sim. Ca + CO) {triple2, PLSH14[F2]} ;sp31: f2 channel - shaped pulse 180 degree (adiabatic bilev decoupling) {default+triple+triple2+triple_na, PLSH11[F2]}

  ;p0 : {all, P90[F1]} ;p1 : f1 channel - 90 degree high power pulse {all, P90[F1]} ;p2 : f1 channel - 180 degree high power pulse {all, P90[F1]*2} ;p3 : f2 channel - 90 degree high power pulse {all, P90[F2]} ;p4 : f2 channel - 180 degree high power pulse {all, P90[F2]*2} ;p5 : f1 channel - 60 degree low power pulse {all, PTOC[F1]*0.66} ;p6 : f1 channel - 90 degree low power pulse {all, PTOC[F1]} ;p7 : f1 channel - 180 degree low power pulse {default+lcnmr+triple+triple_c, PTOC[F1]*2} ; or f1 channel - 180 degree shaped pulse (cleanex sel. H2O) {triple2, PSH11[F1]} ; or f2 channel - 90 degree pulse at pl20 (TOCSY, higher sel.) {triple_na, PUSER5[F2]} ;p8 : f2 channel - 60 degree low power pulse {} ; or f1 channel - 90 degree shaped pulse (wet) {default, PSH3[F1]} ; or f1 channel - 180 degree shaped pulse (adiabatic) {triple_c, PSH12[F1]} ; or f2 channel - 180 degree shaped pulse (adiabatic) {triple+triple2+triple_na, PSH3[F2]} ;p9 : f2 channel - 90 degree low power pulse (TOCSY) {all, PTOC[F2]} ;p10: f1 channel - 90 degree low power pulse (cleanex spinlock) {triple2, PUSER1[F1]} ; or f2 channel - 180 degree low power pulse {default+lcnmr+triple+triple_c, PTOC[F2]*2} ; or f2 channel - 180 degree shaped pulse (higher selectivity) {triple_na, PSH6U[F2]} ;p11: f1 channel - 90 degree shaped pulse (selective excitation) {default, PSH1[F1]} ; or f1 channel - 90 degree shaped pulse (selective excitation) {triple_c, PSH4[F1]} ; or f1 channel - 90 degree shaped pulse (wet) {lcnmr, PSH3[F1]} ; or f1 channel - 90 degree shaped pulse (water flipback/watergate) {triple+triple2+triple_na, PSH8[F1]} ;p12: f1 channel - 180 degree shaped pulse (H, selective) {default+lcnmr, PSH2[F1]} ; or f1 channel - 180 degree shaped pulse (C, adiabatic) {default+lcnmr, PSH2[F1]} ; or f1 channel - 180 degree shaped pulse (C, selective) {triple_c, PSH6[F1]} ; or f1 channel - 180 degree shaped pulse (excitation sculpting) {triple+triple2, PSH8[F1]*2} ; or f1 channel - 180 degree shaped pulse (H, selective) {triple_na, PSH1U[F1]} ;p13: f2 channel - 90 degree shaped pulse {triple+triple2, PSH4[F2]} ; or f2 channel - 90 degree shaped pulse {triple_na, PSH1U[F2]} ; or f2 channel - 90 degree shaped pulse (H, selective) {triple_c, PSH15[F2]} ;p14: f2 channel - 180 degree shaped pulse (adiabatic) {default+lcnmr, PSH3[F2]} ; or f2 channel - 180 degree shaped pulse (selective) {triple+triple2, PSH6[F2]} ; or f2 channel - 180 degree shaped pulse (selective) {triple_na, PSH3U[F2]} ;p15: f1 channel - pulse for ROESY spinlock {default+lcnmr, TROE[F1]} ; or f1 channel - 90 degree shaped pulse (cleanex sel. H2O) {triple2, PSH10[F1]} ; or f2 channel - 180 degree shaped pulse (adiabatic matched sweep) {triple, PSH15[F2]} ; or f2 channel - 90 degree shaped pulse (higher selectivity) {triple_na, PSH4U[F2]} ;p16: homospoil/gradient pulse {all, P_grad1} ;p17: f1 channel - trim pulse at pl10 or pl15 {all, P_mlev} ;p18: f1 channel - shaped pulse (off resonance presaturation) {default+lcnmr+triple+triple2+triple_na, PSH7[F1]} ;p19: homospoil/gradient pulse 2 {all, P_grad2} ;p20: f2 channel - trim pulse {all, P_mlev} ;p21: f3 channel - 90 degree high power pulse {all, P90[F3]} ;p22: f3 channel - 180 degree high power pulse {all, P90[F3]*2} ;p23: f2 channel - 90 degree shaped pulse (higher selectivity) {triple+triple2, PSH7[F2]} ; or f2 channel - 90 degree shaped pulse (twofold modulated) {triple_na, PSH7U[F2]} ; or f4 channel - 90 degree high power pulse {default, P90[F4]} ;p24: f1 channel - 180 degree shaped pulse (adiabatic) {triple_c, PSH13[F1]} ; or f2 channel - 180 degree shaped pulse (adiabatic) {default+lcnmr, PSH2[F2]} ; or f2 channel - 180 degree shaped pulse (higher selectivity) {triple+triple2, PSH9[F2]} ; or f3 channel - 90 degree pulse at pl22 (TOCSY, higher sel.) {triple_na, PUSER4[F3]} ; or f4 channel - 180 degree high power pulse {} ;p25: f1 channel - 90 degree pulse at pl27 (pulsed ROESY) {default+lcnmr, PROE[F1]*2} ; or f1 channel - 90 degree shaped pulse (higher selectivity) {triple_c, PSH14[F1]} ; or f3 channel - pulse for t1rho experiment {pp} ; or f3 channel - pulse for TOCSY-spinlock experiment {triple} ; or f3 channel - 90 degree pulse at pl23 (TOCSY) {triple_na, PUSER3[F3]} ; or f3 channel - 180 degree low power pulse (Rexchange) {triple2, PUSER2[F3]*2} ;p26: f1 channel - 90 degree pulse at pl19 {triple*, PCPDP[F1]} ;p27: f1 channel - 90 degree pulse at pl18 (3-9-19 watergate) {default+lcnmr+triple+triple2+triple_na, P90[F1]} ;p28: f1 channel - trim pulse at pl1 {all, P_hsqc} ;p29: f1 channel - 90 degree shaped pulse (water flipback) {default, PSH8[F1]} ; or f1 channel - 90 degree shaped pulse (water flipback2) {triple+triple_na, PSH9[F1]}

   

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Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

  ; or

 f2 channel - 90 degree shaped pulse (water flipback) {triple c, PSH16[F2]}

; or f3 channel - 90 degree shaped pulse (T1rho adiabatic ramp) {triple2, PSH1[F3]} ; or homospoil/gradient pulse 3 {pp};p30: f1 channel - 180 degree shaped pulse (sim. Ca + CO) {triple_c, PSH15[F1]}; or f2 channel - 180 degree shaped pulse (sim. Ca + CO decoupling) {triple2, PSH14[F2]} ; or f3 channel - 180 degree pulse at pl23 {triple, PTOC[F3]*2} ; or f3 channel - 180 degree shaped pulse {triple_na, PSH1U[F3]}; or homospoil/gradient pulse 4 {pp}; or gradient pulse for diffusion (dosy) {};p31: f2 channel - 180 degree shaped pulse (adiabatic matched sweep) {default, PSH15[F2]} ; or f2 channel - 180 degree shaped pulse (sel. Ca or CO decoupling) {triple, PSH10[F2]} ; or f2 channel - 180 degree shaped pulse (Cbeta decoupling) {triple2, PSH13[F2]} ; or f2 channel - 180 degree shaped pulse (sel. C decoupling) {triple_na, PSH6U[F2]}; or f2 channel - 180 degree pulse (low power decoupling) {lcnmr, PUSER1[F2]} ; or homospoil/gradient pulse 5 {pp} ;p32: f1 channel - 180 degree shaped pulse (adiabatic sweep: z-spoil) {default, PSH16[F1]} ; or f3 channel - 180 degree shaped pulse (adiabatic) {triple_na, PSH2U[F3]} ;p33: f3 channel - trim pulse {triple_na, P_mlev} ;p63: f2 channel - 180 degree shaped pulse (adiabatic bilev sweep) {default+triple+triple2+triple_na, PSH11[F2]}

  ;d0 : incremented delay (2D or 3D) [3 usec] ;d1 : relaxation delay; 1-5 * T1 ;d2 : 1/(2J) ;d3 : 1/(3J) or 1/(6J) ;d4 : 1/(4J) ;d5 : DE/2 ;d6 : delay for evolution of long range couplings ;d7 : delay for inversion recovery ;d8 : NOESY mixing time ;d9 : TOCSY mixing time {all, TTOC[F1]} ;d10: incremented delay (3D) ;d11: delay for disk I/O [30 msec] ;d12: delay for power switching [20 usec] ;d13: short delay [4 usec] ;d14: delay for evolution after shaped pulse ;d15: TOCSY mixing time (CC) {triple*, TTOC[F2]} ;d16: delay for homospoil/gradient recovery {all, D_grad} ;d17: delay for DANTE pulse-train ;d18: delay for evolution of long range couplings ;d19: delay for binomial water suppression ;d20: for different applications ;d21: for different applications ;d22: 1/(2J(XY)) ;d23: 1/(4J(XY)) or 1/(2J(XY)) ;d24: for different applications ;d25: 1/(6J(YH)) or 1/(8J(XY)) ;d26: 1/(4J(YH)) ;d27: for different applications ;d28: for different applications ;d29: for different applications ;d30: for different applications ;d31: for different applications

  ;cnst0 : for protein experiments - N chemical shift (offset, in ppm) ; or for na experiments - calculated chemical shift (offset, in ppm) ; or for na experiments - N(aro) chemical shift (offset, in ppm) [195 ppm] ;cnst1 : J (HH) ;cnst2 : J (XH) ;cnst3 : J (XX) ;cnst4 : J (YH) ;cnst5 : J (XY) ;cnst6 : J (XH)min ;cnst7 : J (XH)max ;cnst8 : bandwidth of excitation for Dante-z pulse ;cnst9 : for different applications as J ;cnst10: for different applications as J ;cnst11: for multiplicity selection ;cnst12: for multiplicity selection ;cnst13: J (XH) long range ;cnst14: J (XH) long range (min) ;cnst15: J (XH) long range (max) ;cnst16: J-scale factor

   

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Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

 

  ; or for na experiments - H6/8 and/or H1' chemical shift (offset, in ppm) ;cnst17: factor to compensate for coupling evolution during a pulse ; or for na experiments - H1' chemical shift (offset, in ppm) ;cnst18: for protein experiments - H2O chemical shift (offset, in ppm) ; or for na experiments - H2O chemical shift (offset, in ppm) ;cnst19: for protein experiments - H(N) chemical shift (offset, in ppm) ; or : for na experiments - H(N) chemical shift (offset, in ppm) ;cnst20: for protein experiments - Haliphatic chemical shift (offset, in ppm) ;cnst21: for na experiments - C1' chemical shift (offset, in ppm) [90 ppm] ; or for protein experiments - CO chemical shift (offset, in ppm) ;cnst22: for protein experiments - Calpha chemical shift (offset, in ppm) ; or for na experiments - C6/8 chemical shift (offset, in ppm) [137 ppm] ;cnst23: for protein experiments - Caliphatic chemical shift (offset, in ppm) ; or for na experiments - C2' chemical shift (offset, in ppm) [72 ppm] ;cnst24: for protein experiments - Caromatic chemical shift (offset, in ppm) ; or for na experiments - C4 (C/U) chemical shift (offset, in ppm) [169 ppm] ;cnst25: for protein experiments - flag for cross peak / reference experiments ; or for na experiments - C6 (A) chemical shift (offset, in ppm) [160 ppm] ;cnst26: for protein experiments - Call chemical shift (offset, in ppm) ; or for na experiments - C5 (G) chemical shift (offset, in ppm) [119 ppm] ;cnst27: for protein experiments - ( Cgamma chemical shift (offset, in ppm) ) ; or for na experiments - C2/4 chemical shift (offset, in ppm) [152 ppm] ;cnst28: for protein experiments - Haromatic chemical shift (offset, in ppm) ; or for na experiments - C5 (C/U) chemical shift (offset, in ppm) [105 ppm] ;cnst29: for protein experiments - N(H) chemical shift (offset, in ppm) ; or for na experiments - C(aro) chemical shift (offset, in ppm) [145 ppm] ;cnst30: for protein experiments - Cbeta chemical shift (offset, in ppm) ; or for na experiments - N(H) chemical shift (offset, in ppm) [151 ppm] ;cnst31: scaling factor ; or for na experiments - N(H2) chemical shift (offset, in ppm) [81 ppm]

  ;vc : variable loop counter, taken from vc-list ;vd : variable delay, taken from vd-list

 ;l1 : loop for spinlock cycle ;l2 : loop for GARP cycle: l2 * 31.75 * 4 * p9 => AQ ;l3 : loop for phase sensitive 2D or 3D using ; States et al. or States-TPPI method: l3 = td1/2 ;l4 : for different applications ;l5 : for different applications ;l6 : loop for shaped pulse presaturation during relaxation delay ;l7 : loop for shaped pulse presaturation during mixing time ;l8 : number of frequencies for multiple presaturation ;l11: loop for spinlock cycle 2

 

  ;$Id: $

                         

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Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

 ;Relations.info ;avance-version (05/10/24) ; ;$CLASS=HighRes Info ;$COMMENT=

 

 ;The following convention is used for power levels, pulses, delays ;and loop counters in the different relation files for prosol: ; ;all = default + lcnmr + triple + triple2 + triple_c + triple_na ;triple* = triple + triple2 + triple_c + triple_na ;! = except ; ;prosol par. rel. file pulseprogram parameter ; ;D_grad all d16: delay for homospoil/gradient recovery ; ;P90[F1] all p0 : ;P90[F1] all p1 : f1 channel - 90 degree high power pulse ;P90[F1] all(!triple_c) p27: f1 channel - 90 degree pulse at pl18 (3-9-19 watergate) ;P90[F1]*2 all p2 : f1 channel - 180 degree high power pulse ;P90[F2] all p3 : f2 channel - 90 degree high power pulse ;P90[F2]*2 all p4 : f2 channel - 180 degree high power pulse ;P90[F3] all p21: f3 channel - 90 degree high power pulse ;P90[F3]*2 all p22: f3 channel - 180 degree high power pulse ;P90[F4] default p23: f4 channel - 90 degree high power pulse ; ;PCPDP[F1] triple+triple2+triple_na p26: f1 channel - 90 degree pulse at pl19 ; ;PL90[F1] all pl1 : f1 channel - power level for pulse (default) ;PL90[F1] all(!triple_c) pl18: f1 channel - power level for 3-9-19-pulse (watergate) ;PL90[F2] all pl2 : f2 channel - power level for pulse (default) ;PL90[F3] all pl3 : f3 channel - power level for pulse (default) ;PL90[F4] all pl4 : f4 channel - power level for pulse (default) ; ;PLCPDP[F1] all(!triple_c) pl19: f1 channel - power level for CPD/BB decoupling ;PLCPDP[F2] all pl12: f2 channel - power level for CPD/BB decoupling ;PLCPDP[F2] default+triple+triple2 pl30: f2 channel - power level for CPD/BB decoupling ; +triple_na ;PLCPDP[F2]-18 lcnmr pl26: f2 channel - power level for cw decoupling ;PLCPDP[F3] all pl16: f3 channel - power level for CPD/BB decoupling ;PLCPDP[F4] all pl17: f4 channel - power level for CPD/BB decoupling ;PLCPD2[F2] default+lcnmr+triple_c pl13: f2 channel - power level for second CPD/BB decoupling ; ;PLCW[F1] all(!triple_c) pl9 : f1 channel - power level for presaturation ;PLCW[F2] default+lcnmr pl21: f2 channel - power level for presaturation ;PLCW[F2] triple+triple2 pl14: f2 channel - power level for cw saturation ;PLCW[F3] lcnmr pl22: f3 channel - power level for presaturation ; ;PLHD[F2] all pl24: f2 channel - power level for hd/hc decoupling ; ;PLNOE[F2] default pl14: f2 channel - power level for cw saturation ; ;PLROE[F1] all pl11: f1 channel - power level for ROESY-spinlock ;PLROE[F1] default pl27: f1 channel - power level for pulsed ROESY-spinlock ; ;PLSH1[F1] default sp1 : f1 channel - shaped pulse for selective excitation ;PLSH1[F3] triple2 sp19: f3 channel - shaped pulse 90 degree (T1rho, adiab. ramp up) ;PLSH2[F1] default sp2 : f1 channel - shaped pulse 180 degree ;PLSH2[F2] default sp7 : f2 channel - shaped pulse 180 degree (adiabatic) ;PLSH2[F3] triple2 sp20: f3 channel - shaped pulse 90 degree (T1rho, adiab. ramp down) ;PLSH3[F1] lcnmr sp1 : f1 channel - shaped pulse for wet ;PLSH3[F1] lcnmr sp2 : f1 channel - shaped pulse for wet ;PLSH3[F1]+0.87 lcnmr sp7 : f1 channel - shaped pulse for wet ;PLSH3[F1]+0.87 default sp19: f1 channel - shaped pulse for wet ;PLSH3[F1]-1.04 lcnmr sp8 : f1 channel - shaped pulse for wet ;PLSH3[F1]-1.04 default sp20: f1 channel - shaped pulse for wet ;PLSH3[F1]+2.27 lcnmr sp9 : f1 channel - shaped pulse for wet ;PLSH3[F1]+2.27 default sp21: f1 channel - shaped pulse for wet ;PLSH3[F1]-5.05 lcnmr sp10: f1 channel - shaped pulse for wet ;PLSH3[F1]-5.05 default sp22: f1 channel - shaped pulse for wet

  

© 2006 BRUKER Biospin, Teodor Parella. 246

;PLSH3[F2] default sp3 : f2 channel - shaped pulse 180 degree (adiabatic);PLSH3[F2] triple+triple2+trip e_na sp13: f2 channel - shaped pulse 180 degree (adiabatic);PLSH4[F1] triple_c sp23: f1 channel - shaped pulse 90 degree (on resonance) ;PLSH4[F2] triple+triple2 sp2 : f2 channel - shaped pulse 90 degree (on resonance) ;PLSH4[F2] triple+triple2 sp4 : f2 channel - shaped pulse 90 degree (off resonance) ;PLSH5[F1] triple_c sp25: f1 channel - shaped pulse 90 degree (on resonance) ;PLSH5[F2] triple+triple2 sp8 : f2 channel - shaped pulse 90 degree (on res.,time reversed) ;PLSH6[F1] triple_c sp22: f1 channel - shaped pulse 180 degree (off resonance) ;PLSH6[F1] triple_c sp24: f1 channel - shaped pulse 180 degree (on resonance) ;PLSH6[F1] triple_c sp26: f1 channel - shaped pulse 180 degree (off resonance) ;PLSH6[F1] triple_c sp27: f1 channel - shaped pulse 180 degree (off resonance) ;PLSH6[F1] triple_c sp29: f1 channel - shaped pulse 180 degree (off resonance) ;PLSH6[F2] triple+triple2 sp3 : f2 channel - shaped pulse 180 degree (on resonance) ;PLSH6[F2] triple+triple2 sp5 : f2 channel - shaped pulse 180 degree (off resonance) ;PLSH6[F2] triple+triple2 sp7 : f2 channel - shaped pulse 180 degree (off resonance2)

 

Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

  

l                       

 ;PLSH7[F1] all(!triple_c) sp6 : f1 channel - shaped pulse for presaturation ;PLSH7[F2] triple* sp10: f2 channel - shaped pulse 90 degree (higher selectivity) ;PLSH8[F1] triple+triple2+triple_na sp1 : f1 channel - shaped pulse for water flipback ;PLSH8[F1] default sp11: f1 channel - shaped pulse for water flipback ;PLSH8[F2] triple+triple2 sp12: f2 channel - shaped pulse 90 degree (higher sel., time rev.) ;PLSH9[F1] triple+triple2+triple_na sp11: f1 channel - shaped pulse for water flipback2 ;PLSH9[F2] triple+triple2 sp9 : f2 channel - shaped pulse 180 degree (higher selectivity) ;PLSH9[F2] triple+triple2 sp16: f2 channel - shaped pulse 180 degree (higher selectivity) ;PLSH9[F2] triple+triple2 sp17: f2 channel - shaped pulse 180 degree (higher selectivity) ;PLSH10[F1] triple2 sp22: f1 channel - shaped pulse 90 degree (H2O on resonance) ;PLSH10[F2] triple sp15: f2 channel - shaped pulse 180 degree for decoupling (Ca or CO) ;PLSH10[F2] triple+triple2 pl28: f2 channel - power level for selective Ca or CO decoupling ;PLSH11[F1] triple2 sp21: f1 channel - shaped pulse 180 degree (H2O on resonance) ;PLSH11[F2] default+triple+triple2 sp31: f2 channel - shaped pulse 180 degree (adiabatic decoupling) ; +triple_na ;PLSH12[F1] triple_c sp13: f1 channel - shaped pulse 180 degree (adiabatic) ;PLSH12[F2] default+triple+triple2 sp14: f2 channel - shaped pulse 180 degree (adiabatic bilev decoupling) ;PLSH13[F1] triple_c sp7 : f2 channel - shaped pulse 180 degree (adiabatic) ;PLSH13[F2] triple+triple2 pl13: f2 channel - power level for Cbeta/CO decoupling ;PLSH13[F2] triple2 sp15: f2 channel - shaped pulse 180 degree for decoupling (Cbeta) ;PLSH14[F1] triple_c sp28: f1 channel - shaped pulse 180 degree (higher selectivity) ;PLSH14[F2] triple2 pl29: f2 channel - power level for simultaneous Ca and CO decoupling ;PLSH14[F2] triple2 sp30: f2 channel - power level for simultaneous Ca and CO decoupling ;PLSH14[F2] triple_c sp19: f2 channel - shaped pulse 90 degree (HN) ;PLSH15[F1] triple_c sp30: f1 channel - shaped pulse 180 degree (sim. Ca + CO decoupling) ;PLSH15[F2] default+triple sp18: f2 channel - shaped pulse 180 degree (adiabatic matched sweep) ;PLSH15[F2] triple_c sp20: f2 channel - shaped pulse 90 degree (HN tr) ;PLSH16[F1] default sp29: f1 channel - shaped pulse 180 degree (adiabatic: z-spoil) ;PLSH16[F2] triple_c sp11: f2 channel - shaped pulse 90 degree (water flipback) ;    

  

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Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

 ;PLSH1U[F1] triple_na sp23: f1 channel - shaped pulse 180 degree (_NA: H) ;PLSH1U[F1] triple_na sp24: f1 channel - shaped pulse 180 degree (_NA: H) ;PLSH1U[F2] triple_na sp2 : f2 channel - shaped pulse 90 degree (_NA: C) ;PLSH1U[F3] triple_na sp9 : f3 channel - shaped pulse 180 degree (_NA: N) ;PLSH2U[F2] triple_na sp8 : f2 channel - shaped pulse 90 degree (_NA: C, tr) ;PLSH2U[F3] triple_na sp14: f3 channel - shaped pulse 180 degree (_NA: N, adiabatic) ;PLSH3U[F2] triple_na sp3 : f2 channel - shaped pulse 180 degree (_NA: C) ;PLSH3U[F2] triple_na sp5 : f2 channel - shaped pulse 180 degree (_NA: C) ;PLSH3U[F2] triple_na sp7 : f2 channel - shaped pulse 180 degree (_NA: C) ;PLSH4U[F2] triple_na sp10: f2 channel - shaped pulse 90 degree (_NA: C, higher sel.) ;PLSH5U[F2] triple_na sp12: f2 channel - shaped pulse 90 degree (_NA: C, higher sel., tr) ;PLSH6U[F2] triple_na sp15: f2 channel - shaped pulse 180 degree (_NA: C, decoupling) ;PLSH6U[F2] triple_na sp25: f2 channel - shaped pulse 180 degree (_NA: C, higher sel.) ;PLSH6U[F2] triple_na pl28: f2 channel - shaped pulse 180 degree (_NA: C, decoupling) ;PLSH7U[F2] triple_na sp0 : f2 channel - shaped pulse 180 degree (_NA: C, twofold mod) ; ;PLTOC[F1] all pl10: f1 channel - power level for TOCSY-spinlock ;PLTOC[F2] all pl15: f2 channel - power level for TOCSY-spinlock ;PLTOC[F3] all(!triple2+triple_na) pl23: f3 channel - power level for TOCSY-spinlock ; ;PLUSER1[F1] triple2 pl27: f1 channel - power level for CLEANEX spinlock ;PLUSER1[F2] lcnmr pl14: f2 channel - power level for low power decoupling ;PLUSER1[F3] triple* pl25: f3 channel - power level for T1rho spinlock ;PLUSER2[F2] default+triple+triple2 pl31: f2 channel - power level for bilev dec. (cw part) ; +triple_na ;PLUSER2[F3] triple2 pl23: f3 channel - power level for Rexchange ;PLUSER3[F1] triple_na pl25: f1 channel - power level for hetero TOCSY ;PLUSER3[F2] triple_na pl26: f2 channel - power level for hetero TOCSY ;PLUSER3[F3] triple_na pl23: f3 channel - power level for hetero TOCSY ;PLUSER4[F2] triple_na pl27: f2 channel - power level for hetero TOCSY higher sel. ;PLUSER4[F3] triple_na pl22: f3 channel - power level for hetero TOCSY higher sel. ;PLUSER5[F2] triple_na pl20: f2 channel - power level for TOCSY higher sel. ; ;PROE[F1]*2 default+lcnmr p25: f1 channel - 90 degree pulse at pl27 (pulsed ROESY) ; ;PSH1[F1] default p11: f1 channel - 90 degree shaped pulse (selective excitation) ;PSH1[F3] triple2 p29: f3 channel - shaped pulse for adiabatic ramping ;PSH2[F1] default+lcnmr p12: f1 channel - 180 degree shaped pulse (C, adiabatic) ;PSH2[F1] default+lcnmr p12: f1 channel - 180 degree shaped pulse (H, selective) ;PSH2[F2] default+lcnmr p24: f2 channel - 180 degree shaped pulse (adiabatic) ;PSH3[F1] lcnmr p11: f1 channel - 90 degree shaped pulse (wet) ;PSH3[F1] default p8 : f1 channel - 90 degree shaped pulse (wet) ;PSH3[F2] default+lcnmr p14: f2 channel - 180 degree shaped pulse (adiabatic) ;PSH3[F2] triple+triple2+triple_na p8 : f2 channel - 180 degree shaped pulse (adiabatic) ;PSH4[F1] triple_c p11: f1 channel - 90 degree shaped pulse ;PSH4[F2] triple+triple2 p13: f2 channel - 90 degree shaped pulse ;PSH6[F1] triple_c p12: f1 channel - 180 degree shaped pulse (selective) ;PSH6[F2] triple+triple2 p14: f2 channel - 180 degree shaped pulse (selective) ;PSH7[F1] all(!triple_c) p18: f1 channel - shaped pulse (off resonance presaturation) ;PSH7[F2] triple+triple2 p23: f2 channel - 90 degree shaped pulse (higher selectivity) ;PSH8[F1] triple+triple2+triple_na p11: f1 channel - 90 degree shaped pulse (water flipback/watergate) ;PSH8[F1]*2 triple+triple2 p12: f1 channel - 180 degree shaped pulse (excitation sculpting) ;PSH8[F1] default p29: f1 channel - 90 degree shaped pulse (water flipback) ;PSH9[F1] triple+triple_na p29: f1 channel - 90 degree shaped pulse (water flipback2) ;PSH9[F2] triple+triple2 p24: f2 channel - 180 degree shaped pulse (higher selectivity) ;PSH10[F1] triple2 p15: f1 channel - 90 degree shaped pulse (H2O on resonance) ;PSH10[F2] triple p31: f2 channel - 180 degree shaped pulse (sel. Ca or COdecoupling)    

  

© 2006 BRUKER Biospin, Teodor Parella. 248

 

Pulse Program Catalogue NMRGuide4.1 – Topspin 2.0

 ;PSH11[F1] triple2 p7 : f1 channel - 180 degree shaped pulse (H2O on resonance) ;PSH11[F2] default+triple+triple2 p63 : f2 channel - 180 degree shaped pulse (adiabaticdecoupling) ; +triple_na ;PSH12[F1] triple_c p8 : f1 channel - 180 degree shaped pulse (adiabatic) ;PSH13[F1] triple_c p24: f1 channel - 180 degree shaped pulse (adiabatic) ;PSH13[F2] triple* pcpd8: f2 channel - 180 degree shaped pulse (Cbeta decoupling) ;PSH13[F2] triple2 p31: f2 channel - 180 degree shaped pulse (Cbeta decoupling) ;PSH14[F1] triple_c p25: f1 channel - 180 degree shaped pulse (higher selectivity) ;PSH14[F2] triple2 p30: f2 channel - 180 degree shaped pulse (sim. Ca + CO decoupling) ;PSH15[F1] default p31: f1 channel - 180 degree shaped pulse for inversion (adiabatic matched sweep) ;PSH15[F1] triple_c p30: f1 channel - 180 degree shaped pulse (sim. Ca + CO decoupling) ;PSH15[F2] triple p15: f2 channel - 180 degree shaped pulse for inversion (adiabatic matched sweep) ;PSH15[F2] triple_c p13: f2 channel - 90 degree shaped pulse (H, selective) ;PSH16[F1] default p32: f1 channel - 180 degree shaped pulse for inversion (adiabatic: z-spoil) ;PSH16[F2] triple_c p29: f2 channel - 90 degree shaped pulse for inversion (water flipback) ; ;PSH1U[F1] triple_na p12: f1 channel - 180 degree shaped pulse (_NA: H) ;PSH1U[F2] triple_na p13: f2 channel - 90 degree shaped pulse (_NA: C) ;PSH1U[F3] triple_na p30: f3 channel - 180 degree shaped pulse (_NA: N) ;PSH2U[F3] triple_na p32: f3 channel - 180 degree shaped pulse (_NA: N, adiabatic) ;PSH3U[F2] triple_na p14: f2 channel - 180 degree shaped pulse (_NA: C) ;PSH4U[F2] triple_na p15: f2 channel - 90 degree shaped pulse (_NA: C, higher sel.) ;PSH6U[F2] triple_na p10: f2 channel - 180 degree shaped pulse (_NA: C, higher sel.) ;PSH6U[F2] triple_na p31: f2 channel - 180 degree shaped pulse (_NA: C, decoupling) ;PSH7U[F2] triple_na p23: f2 channel - 180 degree shaped pulse (_NA: C, twofold mod) ; ;PTOC[F1] all p6 : f1 channel - 90 degree low power pulse ;PTOC[F1]*0.66 all(!triple_na) p5 : f1 channel - 60 degree low power pulse ;PTOC[F1]*2 all(!triple2+triple_na) p7 : f1 channel - 180 degree low power pulse ;PTOC[F2] all p9 : f2 channel - 90 degree low power pulse ;PTOC[F2]*2 all(!triple2+triple_na) p10: f2 channel - 180 degree low power pulse ;PTOC[F3] triple p25: f3 channel - 90 degree pulse at pl23 ;PTOC[F3]*2 triple p30: f3 channel - 180 degree pulse at pl23 ; ;PUSER1[F1] triple2 p10: f1 channel - 180 degree low power pulse (CLEANEX spinlock) ;PUSER1[F2] lcnmr p31: f2 channel - 90 degree low power pulse (decoupling) ;PUSER2[F3]*2 triple2 p25: f3 channel - 180 degree low power pulse (Rexchange) ;PUSER3[F3] triple_na p25: f3 channel - 90 degree low power pulse (hetero TOCSY) ;PUSER4[F3] triple_na p24: f3 channel - 90 degree low power pulse (hetero TOCSY higher sel.) ;PUSER5[F2] triple_na p7 : f2 channel - 90 degree low power pulse (TOCSYhigher sel.) ; ;P_grad1 all p16: homospoil/gradient pulse;P_grad2 all p19: homospoil/gradient pulse 2;P_hsqc all p28: f1 channel - trim pulse at pl1 ;P_mlev all p17: f1 channel - trim pulse at pl10 ;P_mlev all(!lcnmr) p20: f2 channel - trim pulse at pl15 ;P_mlev triple_na p33: f3 channel - trim pulse at pl23 ; ;TROE[F1] default+lcnmr p15: f1 channel - pulse for ROESY spinlock ; ;TTOC[F1] all d9 : TOCSY mixing time;TTOC[F2] triple* d15: TOCSY mixing time (CC)

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 © 2006 BRUKER Biospin, Teodor Parella. 249