Putting GLOBIOM data into a database

Pedro R. Andrade

Cambrigde, 2013

Integration between TerraLib and IIASA tools

G4M

SciSoft

TerraLib

GeoWikiEPICGLOBIOM

???

Integration between TerraLib and GLOBIOM

TerraLib

GLOBIOM

GLOBIOM Integration

TerraView

data

Amazonia (TerraLib)

export

import GeoTiff, CSV

dataGLOBIOM GMS

files

GDX files

simU shapefiles

GLOBIOM Integration

TerraView

data

Amazonia (TerraLib)

export

import GeoTiff, CSV

dataGLOBIOM GMS

files

GDX files

simU shapefiles

Implementation

generate-brazil-cr.R

brasilcr_pt.shp

Implementation

CRbrazil-database.R

CRbrazil-plotall.R

CRbrazil-basics.R

globiom(TerraLib)

bmp files

ACR_COMPARE.csvCROP_DATA_COMPARE.csvYLD_COMPARE.csv...

aRT

FILE aux3 /'Land_Compare3.CSV'/;aux3.pc=5;PUT aux3;

LOOP ( (COUNTRY('Brazil'),ALLCOLROW,AltiClass,SlpClass,SOILCLASS,AEZCLASS,LC_TYPE, AllMacroScen,AllBioenScen,IEA_SCEN,ALLScenYear) $ Land_Compare3(COUNTRY,ALLCOLROW,AltiClass,SlpClass,SOILCLASS,AEZCLASS, LC_TYPE, AllMacroScen,AllBioenScen,IEA_SCEN,ALLScenYear), PUT COUNTRY.tl,ALLCOLROW.tl,AltiClass.tl,SlpClass.tl,SOILCLASS.tl, AEZCLASS.tl, LC_TYPE.tl,AllMacroScen.tl,AllBioenScen.tl,IEA_SCEN.tl, ALLScenYear.tl, Land_Compare3(COUNTRY,ALLCOLROW,AltiClass,SlpClass, SOILCLASS,AEZCLASS, LC_TYPE,AllMacroScen,AllBioenScen,IEA_SCEN, ALLScenYear) /);PUTCLOSE;

attribute_names = list( ... Land_Compare3 = c("COUNTRY", "ALLCOLROW", "ALTICLASS", "SLPCLASS", "SOILCLASS", "AEZCLASS", "LC_TYPE", "AllMacroScen", "AllBioenScen", "IEA_SCEN”, "ALLScenYear", "Value"),)

7_output.gms

CRbrazil-basics.R

CRbrazil-plotall.R/CRbrazil-database.R

original_file = "LUCDET_Compare"r = read_output_csv(original_file)print_unique(r)w = uniques(r)w$AEZCLASS = NULLw$COUNTRY = NULLw$ALLScenYear = 2000w$IEA_SCEN = "BASE"w$AllMacroScen = NULLw$ALTICLASS = NULLw$SLPCLASS = NULLw$SOILCLASS = NULLsave_all(w, original_file)tstates = createTheme(lstates, paste("states-", original_file, sep=""), view=original_file)setVisual(tstates, visualPolygons(transp=100, cwidth=2))

Output

Selecting attributes

Input

7_output.gms

7_output.gms

R plot x TerraLib database

R plot TerraLib database

Overlay single multiplePlotting at once

multiple maps single map

Colors and spatial operations

require R knowledge

can be handled visually

Running script

every time to plot the results (or save the R session)

only once

Future development

Version 2.0 of the scripts Review R-Script_Instructions.pdf Adapt the scripts to work with different geographical areas