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GIS/RS multi-scale approach for the assessment of mangrove species composition and coverage Rocky Kaku, Vanuatu Fisheries Department & Franck Magron, Pacific Community

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Page 1: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

GIS/RS multi-scale approach for the assessment of mangrove species composition and coverage

Rocky Kaku, Vanuatu Fisheries Department& Franck Magron, Pacific Community

Page 2: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Methodology

1. Preparation of field survey using satellite imagery (WV2 – 8 bands)

2. Sampling points in the mangrove (field work)

3. GIS mapping and analysis

Page 3: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

WV2 spectral bands

Mangrove classification

Visible bands Red edge & NIR bandsVisible bands PCA all bands

Masked image

Page 4: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Mangrove remote sensing

Mangroves areas are wet and appear darker than bare soil, urban areas and grass fields on near-infrared bands.

Visible bands 4,3,2 NIR-1 band (7)

Page 5: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Mangrove remote sensing

A PCA* on all bands excluding water furtherly highlight differences between bare soil (orange), urban areas (magenta), grass fields (light green, khaki) and mangrove areas (sea green, aquamarine).

* PCA = Principal Component Analysis

PCA excluding water Mangrove map (from NC Atlas)

Page 6: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Mangrove remote sensing

Using the non water it is possible to do a first classification and extract areas with similar signatures. This might include vegetation not belonging to the mangrove area.

Classification from PCA

Mangrove

Grass fields

Forest

Bare soil

Urban area

PCA excluding water

Page 7: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Mangrove remote sensing

The classification can be used as a mask to select only pixels with a signature belonging to the mangrove classes

Classification from PCA Reflectances for mangrove classes

Mangrove

Grass fields

Forest

Bare soil

Urban area

Page 8: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Mangrove remote sensing

Finally a PCA on the mangrove class pixels highlights the differences(species composition, cover and exposed soils)

PCA on selected pixelsPixels for mangrove classes

Page 9: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Mangrove remote sensing

Field survey is then necessary to determine what species correspond to the PCA

Page 10: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Application to North Efate mangrove

4 km

PCA on mangrove area

Page 11: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Sampling points in the mangrove

Sampled points for the area

Web database interface

Page 12: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Species composition for sampled points

Page 13: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

PCA vs species composition for sampled points

Page 14: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Delineation of zones based on PCA and species composition and extraction of polygon area in Ha

Page 15: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Intersection of mapping points and polygons

AcAu AcSp AvMa BaRa ExAg HeLi LuLi RhAp RhSa XyGr Poly id Area Ha

20 0 0 0 5 0 2 0 0 0 14 15.94

90 0 0 0 2 0 0 0 0 0 14 15.94

40 0 0 0 3 0 30 0 0 0 14 15.94

1 0 0 0 1 0 1 0 0 0 14 15.94

2 0 1 0 0 0 2 0 0 0 14 15.94

0 0 0 0 2 0 5 0 0 0 14 15.94

0 0 20 0 0 0 0 0 0 0 14 15.94

0 0 40 0 0 0 0 0 0 0 14 15.94

0 0 20 0 1 0 10 0 0 0 14 15.94

0 0 0 0 0 0 1 0 95 0 13 7.15

0 0 10 0 0 0 0 0 40 0 13 7.15

0 0 0 0 0 0 10 0 30 20 12 0.4

0 0 0 0 10 1 1 0 0 20 12 0.4

0 0 0 0 0 0 0 0 70 20 13 7.15

Page 16: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Averaging species composition by polygonand calculation of a weighted average (using area Ha) for the whole area

Page 17: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Similar methodology applied for Aniwa & Emae

Page 18: Rocky Kaku, Vanuatu Fisheries Department & Franck Magron ...gisconference.gsd.spc.int/.../Session_1/06_Mangrove...Mangrove remote sensing A PCA* on all bands excluding water furtherly

Tank yu tumas