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HIV Reservoirs in the Brain: Where, When, How, and What
Do They Mean for Our Patients?
FORMATTED: 10/25/2016
New York, New York: November 4, 2016
Serena S. Spudich, MD, MAProfessor of Neurology
Yale UniversityNew Haven, Connecticut
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Serena S. Spudich, MDDepartment of Neurology
Yale University
HIV reservoirs in the brain: Where, when, how, and what do they mean for our patients?
IAS–USA New York, NYNovember 4, 2016
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• Doing well off ART > 8 years
• No replication‐competent HIV
• Waning HIV antibodies
• No HIV‐specific T cells
‘Berlin patient’ revealed possibility of HIV cure, creating new critical question – is the brain an HIV reservoir?
Slide courtesy of Steve Deeks
New York, New York: November 4, 2016
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How/when are HIV reservoirs established in the brain?
Do HIV reservoirs exist in the brain during cART?
How will HIV cure strategies impact the brain?
How should we consider the brain in our management of
patients?
Key questions relevant to brain reservoirs for HIV
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Thuso: 40 year old man with difficulty walking
40 yo man presented 3/2016 with leg weakness and balance difficulty, vague cognitive symptoms, + urinary incontinence.
• Diagnosed with HIV in 2008, cART‐naïve.
• Labs: Plasma HIV RNA 1.7 million cps/ml and CD4 31 cells/ul.
• CSF microbiology all negative, except CSF HIV RNA >10 million cps/ml.
• MRI Brain (FLAIR sequence) shown below with atrophy and diffuse subcortical white matter changes.
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Diagnosis: HIV‐associated dementia.
Days post ART initiation
0 50 100 150 200 2501
2
3
HIV
RNA (lo
0 50 100 150 200 250-10
-8
-6
-4
-2
0
2
QNZP-4
0 50 100 150 200 2500
20
40
60
DSY
Days
Dig
it Sym
bol (
DSY)
• How does this CNS impact change with potent ART? Do reservoirs for HIV exist within the brain in most patients?
• Since the beginning of the epidemic, CNS involvement has been a hallmark of HIV.
• In some individuals, HIV particularly manifests as CNS dysfunction with profound CNS HIV replication.
QNPZ‐4 – summarized neurologic performance
Thuso: 40 year old man with difficulty walking
New York, New York: November 4, 2016
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HIV‐ tat
Blood brain barrier breakdown
Neurotoxic products (free radicals, cytokines)
HIV‐1 proteins (gp120, tat)
NeopterinChemokines (IP‐10, MCP‐1)
Blood
Brain
Mechanisms of CNS HIV infection prior to ART
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How/when are HIV reservoirs established in the brain?
Do HIV reservoirs exist in the brain during cART?
How will HIV cure strategies impact the brain?
How should we consider the brain in our management of
patients?
Key questions relevant to brain reservoirs for HIV
Slide 11 of 37
Garvey et al, AIDS. 2014; Anthony et al, J Neuropath ExpNeur, 2005; Dahl et al, AIDS 2014.
Positron emission tomography (PET): Abnormal brain uptake of ligand specific for activated microglial cells (>3 years of ART vs HIV‐).
Brain autopsy: Increased activated microglia (CD68+ cells) in (> 1.5 years ART vs HIV‐).
Persistent macrophage/microglial activation on cART with plasma viral suppression
CSF: Elevated CSF neopterin, marker of macrophage activation, associates with detectable CSF HIV RNA by single copy assay (> 10 years of ART).
/ HIV‐
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HIV DNA detected in brain on ART with plasma viral suppression (sudden death)
Slide and data courtesy of Joe Wong
HIV RNA seldom measurable in brain
Wong, Yukl, et al, Keystone HIV Persistence Conference, April 2015
Patient ID Sample type /cell # # +ve PCR reactions Sequence
determined # Unique sequences
GPDH V3
T82 1 0/5 0/5 N -
10 4/5 0/4 N -
50 4/5 0/4 N -
1000 5/5 0/5 N -
>3000 5/5 2/5 Y 1
Slabs 5/5 3/5 Y 3
T82 PBMC - - 1 1
CT R PNNN T RK S I H I - - GPGR A F Y T T GE I I G D I RQAH C. . . . . . . . . . . . N . - - . . . . . L . . . . . . . . . . . . . . .. . . . . . . . . . R . R . QR . . . . . . V . I . K . - . NM . . . . .. . . . . . . . . . . . . . - - . . . . . . . . . . D . . . . . . . . . .. . . . S . . . . . . . . . - - . . . . . . . . . . . . . . . . . . . . .. R . - . . . . . . . . . . - - . R . . . . . . R . . . . . . . . . . . .. R . . . . - . . . . . . . - - . . . . . . . . . . D . . . . . . . . . .. R . - . . . . . . . . . . - - . R . . . . . . R . . . . . . . . E . . .. . . . . . - . . . . . . . - - . . . . . . . . . . D . . . . . . . . . .. I . . . . . . . . . . P . - - . . R . . . . . . E . . . . . . . . . . .. . . . D . . S . . . . . . - - . . . . S . FA . . D V . . . . . . . . .. . . . D . . . . . . . . . - - . . . . S . . A . . D V . . . . . . . . .. I . . . . . . . . . . R . - - . . . Q T . . A . . D . V . . . . . . Y .. . . . . . . . . . . . . . - - . . . . SC . A . . V V . . . . . . P . R
HIV DNA detected in brain on ART with plasma viral suppression
Churchill, et al, Keystone HIV Persistence Conference, April 2015Slide and data courtesy of Melissa Churchill
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LamivudineAbacavirLopinavir/r
hand tremor, ataxia, slurred speech, aphasia
Latest CD4 308 cells/ul; nadir CD4 60 cells/ul
Peluso et al., AIDS, 2012.
Persistent CNS HIV replication on ART with plasma viral suppression: CNS‘escape’
New York, New York: November 4, 2016
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CSF HIV RNA
CSF WBC = 26 cells/ul
Peluso et al., AIDS, 2012.
Persistent CNS HIV replication on ART with plasma viral suppression: CNS‘escape’
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PI: I13V, K20R, M36I, I54V, L63P, V82A
RT: M41L, E44D, D67N, V118I, M184V, L210W, T215Y
Zidovudine Possible ResistanceDidanosine ResistanceLamivudine ResistanceStavudine Possible ResistanceAbacavir ResistanceTenofovir Resistance
Nevirapine No Evidence of ResistanceDelavirdine No Evidence of ResistanceEfavirenz No Evidence of Resistance
Saquinavir ResistanceIndinavir ResistanceRitonavir ResistanceNelfinavir ResistanceAmprenavir ResistanceLopinavir/r Possible ResistanceAtazanavir Possible Resistance
AbacavirLamivudine Darunavir/r NevirapineZidovudine
Resolution of signs and symptomsPeluso et al., AIDS, 2012.
Persistent CNS HIV replication on ART with plasma viral suppression: CNS‘escape’
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THINC Subject 2:CSF escape at two time intervals
●
●
●
●● ● ●
● ● ● ●●
●●
2
3
4
5
6
0 10 20 30Months on HAARTLo
g H
IV v
iral l
oad
(RN
A c
opie
s/
Started DRV/ r/ TDF/ FTC
3 years after diagnosis
Log H
IV v
iral
load
(RN
A c
p/m
l)
Blood plasma
CSF
Pre-HAART T1 T2
UNC ‐ Joseph et al., THINC study
Persistent CNS HIV replication on ART with plasma viral suppression: CNS‘escape’
0
5
10
15
Ba−L JRCSF D12 E9 F10 A11
Per
cen
t In
fect
ivit
y a
t L
ow
CD
4
Elevated macrophage tropism of CSF escape population
New York, New York: November 4, 2016
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Jake: Young man with recent infection, hesitant to start ART• 29 yo man diagnosed in May, 2013, probable acute HIV syndrome in Oct
2012.– On no meds, works as an electrical engineer; lives alone and has good
support network.– He wants to avoid treatment as long as possible.
6/2013 7/2013 9/2013
CD4 count 468 505 422
CD4 % 35 37 33
HIV‐1 RNA 3200 9570 16760
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How/when are HIV reservoirs established in the brain?
Do HIV reservoirs exist in the brain during cART?
How will HIV cure strategies impact the brain?
How should we consider the brain in our management of
patients?
Key questions relevant to brain reservoirs for HIV
Early HIV infection studies
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HIV RNA Levels
0 30 60 90 120 150 180 210 240 270 300 330 360
1
2
3
4
5
6
7
8
log 1
0 c
opie
s/m
l
Days Post HIV Transmission
Plasma
HIV traffics into the CNS in early infection
New York, New York: November 4, 2016
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HIV RNA Levels
0 30 60 90 120 150 180 210 240 270 300 330 360
1
2
3
4
5
6
7
8
log 1
0 c
opie
s/m
l
Days Post HIV Transmission
Plasma CSF
HIV traffics into the CNS in early infection
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HIV RNA Levels
0 30 60 90 120 150 180 210 240 270 300 330 360
1
2
3
4
5
6
7
8
log 1
0 c
opie
s/m
l
Days Post HIV Transmission
CSF
HIV traffics into the CNS in early infection
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CSF Neopterin
0 30 60 90 120 150 180 210 240 270 300 330 3600
20
40
60
80
100
nm
ol/L
Days Post HIV Transmission
Neopterin, biomarker of macrophage activation, is elevated in the CNS compared to HIV negative (dotted line) throughout early infection.
Macrophage activation in the CNS is triggered in early infection
New York, New York: November 4, 2016
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Peluso et al., JID 2013
• Neurofilament Light Chain (NFL) – specific CSF biomarker of axonal injury
Neuronal injury begins during early infection
CSF NFL
0
1000
2000
3000
ng/L
HIV- AHI PHI CHI
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HIV RNA Levels
0 30 60 90 120 150 180 210 240 270 300 330 360
1
2
3
4
5
6
7
8
log 1
0 c
opie
s/m
l
Days Post HIV Transmission
CSF
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0-4 months(n=44)
5-12 months(n=70)
68% 61%14%
16%
2%
13%
6%
7%
13%
A
Not Analyzed Equilibrated (-) Equilibrated (+) Intermediate Compartmentalized
Variable compartmentalization of env sequences between plasma and CSF in primary infection
Sturdevant C., PloS Pathogens 2015
BloodCSF
New York, New York: November 4, 2016
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How/when are HIV reservoirs established in the brain?
Do HIV reservoirs exist in the brain during cART?
How will HIV cure strategies impact the brain?
How should we consider the brain in our management of
patients?
Key questions relevant to brain reservoirs for HIV
Slide 29 of 37Plasma HIV RNA
0 20 40 60 80 100 120 1401
2
3
4
5
6
7
HIV
RNA (lo
g10
cps/m
l)
CSF HIV RNA
0 20 40 60 80 100 120 1401
2
3
4
5
6
7
HIV
RN
A (l
og
10 c
ps/m
l)
CSF WBCs
0 20 40 60 80 100 120 140
0
10
20
30
40
50
60
Days
cells
/L
CSF HIV and CNS inflammation after ART interruption
Price, Deeks, J Neurovirology 2004.
New York, New York: November 4, 2016
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• CSF: inflammatory markers, virology, injury markers• Neuroimaging: MRS, volumetrics, DTI & rs‐fMRI at 3 Tesla magnet strength• Clinical: Neurological exams & neuropsychological assessments
How will HIV cure strategies affect the CNS?
Pre‐ART On ART During intervention/before ATI
At plasma rebound (or before)
On ART in follow up protocol
ART
‘cure’ intervention
ART Interruption
ART
Collaborators: V. Valcour, J. Ananworanich
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SEARCH 026: HIV ‘cure’ intervention with HDAC‐inhibitor, followed by treatment interruption
Wk 0
Start VHM
Wk 10
Stop VHM, Begin ART interrup9on
F/u on ART LP/MRI/NP LP/NP
Detectable plasma HIV
RNA LP/NP MRI/NP
Resume ART
Kroon, et al., IAS Cure Symposium & IAS, 2016
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Kroon, et al., IAS Cure Symposium & IAS, 2016
VHM: Vorinostat (HDAC‐inhibitor)+ Hydroxychloroquine + Maraviroc
SEARCH 026: HIV ‘cure’ intervention with HDAC‐inhibitor,followed by treatment interruption
A. Plasma HIV RNA
Baseline Wk10 VHM ATI On ART
0
10000
20000
30000
40000
HIV
RN
A (c
ps/m
L)
B. CSF HIV RNA Standard Assay
Baseline Wk10 VHM ATI10
20
30
40
50
HIV
RN
A (cps/m
L)
C. CSF HIV RNA Single Copy Assay
Baseline Wk10 VHM ATI0
1
2
3
4
5
20
30
40
50
HIV
RN
A (c
ps/m
L)
New York, New York: November 4, 2016
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Kroon, et al., IAS Cure Symposium & IAS, 2016
VHM: Vorinostat (HDAC‐inibitor)+ Hydroxychloroquine + Maraviroc
A. CSF Protein
Baseline Wk10 VHM ATI
10
20
30
40
50
60
Pro
tein
(mg/d
L)
B. CSF IP-10/CXCL10
Baseline Wk10 VHM ATI
0
50
100
150
200
IP-1
0/C
XC
L10 (pg/m
l)
p = 0.017
C. CSF MCP-1/CCL-2
Baseline Wk10 VHM ATI
0
500
1000
1500
MC
P-1
/CC
L-2
(pg/m
l)
D. CSF Neopterin
Baseline Wk10 VHM ATI
0
2
4
6
CSF N
eopte
rin (n
mol/L
)
SEARCH 026: HIV ‘cure’ intervention with HDAC‐inhibitor, followed by treatment interruption
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How/when are HIV reservoirs established in the brain?
Do HIV reservoirs exist in the brain during cART?
How will HIV cure strategies impact the brain?
How should we consider the brain in our management of
patients?
Key questions relevant to brain reservoirs for HIV
ACTG A5324: Effects of ART intensification on the brain
• Weill Cornell Uptown SiteE 68th St at York AvenueValery Hughes, FNP
212‐746‐4393
• Weill Cornell Chelsea SiteW 23rd St between 5th and 6th
Todd Stroberg, RN212‐746‐7198
• Randomized, placebo‐controlled, double‐blinded phase IV clinical trial, 96 weeks• Study Population (n=186; arms=62)
– Mild neurocognitive impairment (includes neuroasymptomatic)– On stable ART treatment >1 year– Plasma HIV‐1 RNA less than 50 copies/mL
Study Regimens– A: No intensification – B: Intensification with DTG– C: Intensification with DTG and MVC
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New York, New York: November 4, 2016
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2016 USA HIV treatment guidelines (http://aidsinfo.nih.gov/guidelines)
Treat all individuals at the time of HIV diagnosis.
HIV guidelines now incorporate CNS considerations:
• Due to CNS toxicities, efavirenz no longer in first‐line recommended regimens.
• Treatment recommendations for HIV Associated Dementia (no efavirenz, favor regimens with higher presumed CNS penetration).
• Evaluation/treatment of ‘symptomatic CNS escape’ including lumbar puncture for CSF viral load, CSF drug resistance testing and consideration of CNS penetration.
Clinical management of HIV and the brain in 2016
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UNC:Ron SwanstromSarah JosephChrista SturdevantGretja SchnellKevin RobertsonJoe EronTHINC team
U. Gothenburg:Lars HagbergMagnus GisslenHenrik Zetterberg
Milan: Paola Cinque
Sydney:Bruce BrewSarah PalmerInnsbruck: Dietmar Fuchs
AcknowledgementsYale:Michael KozalBrinda EmuLeah LeJen ChiarellaBarbara TurcotteLaurie AndrewsSebastian UrdayMichael PelusoAndrew YoungJoome SuhIdil KoreElham RahimyAndrew SilvermanTess O’Meara
UCSF/San Francisco:
Victor ValcourJoanna HellmuthCollin AdamsLauren WendelkenRichard W. Price Evelyn LeeJulia PetersonRick HechtChris PilcherUCSF Options Study Magnet StaffTeri Liegler
Study Participants
WRAIR/MHRPJintanat AnanworanichSodsai TovanabutraGustavo KijakSuteeraporn PinyakornNelson MichaelJerome KimMerlin Robb
Thai Red Cross AIDS Res Center/SEARCHNittaya PhanuphakPraphan PhanuphakMark de SouzaFrits van GriensvenJames FletcherEugene KroonDonn ColbyCarlo Nitiya ChomcheyDuanghathai SuttichomSomprartthana RattanamaneePeeraya MunguPutthachard SaengtawanTippawan Pankam
Study Participants
NIHR21MH110260R21MH099979R01MH081772R01MH095613R01 NS084911K23MH074466W81XWH‐11‐2‐0174; IAA number NIAID Y1‐AI502602US Military HIV Research Program
Funding Support
New York, New York: November 4, 2016