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SPECIAL VOLUME IN MEMORY OF ILYA PRIGOGINE ADVANCES IN CHEMICAL PHYSICS VOLUME 135 Edited by STUART A. RICE Department of Chemistry and The James Franck Institute The University of Chicago Chicago, Illinois AN INTERSCIENCE PUBLICATION JOHN WILEY & SONS, INC.

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  • SPECIAL VOLUME INMEMORY OF ILYA

    PRIGOGINE

    ADVANCES IN CHEMICAL PHYSICS

    VOLUME 135

    Edited by

    STUART A. RICE

    Department of Chemistry

    and

    The James Franck Institute

    The University of Chicago

    Chicago, Illinois

    AN INTERSCIENCE PUBLICATION

    JOHN WILEY & SONS, INC.

    Innodata9780470121900.jpg

  • SPECIAL VOLUME INMEMORY OF ILYA

    PRIGOGINE

    ADVANCES IN CHEMICAL PHYSICS

    VOLUME 135

  • SPECIAL VOLUME INMEMORY OF ILYA

    PRIGOGINE

    ADVANCES IN CHEMICAL PHYSICS

    VOLUME 135

    Edited by

    STUART A. RICE

    Department of Chemistry

    and

    The James Franck Institute

    The University of Chicago

    Chicago, Illinois

    AN INTERSCIENCE PUBLICATION

    JOHN WILEY & SONS, INC.

  • Copyright # 2007 by John Wiley & Sons, Inc. All rights reserved.

    Published by John Wiley & Sons, Inc., Hoboken, New Jersey.

    Published simultaneously in Canada.

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  • CONTRIBUTORS TO VOLUME 135

    A. ARNEODO, Laboratoire Joliot-Curie et Laboratoire de Physiques, Ecole

    Normale Supérieure de Lyon, 69364 Lyon Cedex 07, France

    B. AUDIT, Laboratoire Joliet-Curie et Laboratoire de Physique, CNRS, Ecole

    Normale Supérieure de Lyon, 69364 Lyon Cedex 07, France

    RADU BALESCU*, Association Euratom—Belgian State for Fusion, Université

    Libre de Bruxelles, B-1050 Brussels, Belgium

    E. B. BRODIE OF BRODIE, Laboratoire Joliet-Curie et Laboratoire de Physique,

    CNRS, Ecole Normale Supérieure de Lyon, 6934 Lyon Cedex 07, France

    Y. D’AUBENTON-CARAFA, Centre de Génétique Moléculaire, CNRS, 91198 Gif-

    sur-Yvette, France

    PIERRE GASPARD, Center for Nonlinear Phenomena and Complex Systems,

    Université Libre de Bruxelles, B-1050 Brussels, Belgium

    ALBERT GOLDBETER, Service de Chimie, Physique, et Biologie Théorique, Faculté

    des Sciences, Université Libre de Bruxelles, B-1050 Bruxelles, Belgium

    S. NICOLAY, Laboratoire Joliet-Curie et Laboratoire de Physique, CNRS, Ecole

    Normale Supérieure de Lyon, 6934 Lyon Cedex 07, France

    GONZOLO ORDONEZ, Center for Studies in Statistical Mechanics and Complex

    Systems, The University of Texas, Austin, Texas 78712, USA; and

    International Solvay Institutes for Physics and Chemistry, CP231, B-1050

    Brussels, Belgium. Present Address: Butler University, Indianapolis,

    Indiana 46208, USA

    TOMIO PETROSKY, Center for Studies in Statistical Mechanics and Complex

    Systems, The University of Texas, Austin, Texas 78712 USA; and

    International Solvay Institutes for Physics and Chemistry, CP231, B-1050

    Brussels, Belgium

    YVES POMEAU, Laboratoire de Physique Statistique de L’Ecole Normale

    Supérieure, 75231 Cedex 05, France. Present Address: Department of

    Mathematics, The University of Arizona, Tucson, Arizona 85721, USA

    ILYA PRIGOGINEy, Center for Studies in Statistical Mechanics and ComplexSystems, The University of Texas, Austin, Texas 78712, USA; and

    *Deceased.yDeceased.

    v

  • International solvay Institutes for Physics and Chemistry, CP231, B-1050

    Brussels, Belgium

    JOHN ROSS, Stanford University, Department of Chemistry, Stanford, California

    94305, USA

    P. ST. JEAN, Laboratoire Joliet-Curie et Laboratoire de Physique, CNRS, Ecole

    Normale Supérieure de Lyon, 6934 Lyon Cedex 07, France

    C. THERMES, Centre de Génétique Moleculaire, CNRS, 91198 Gif-sur-Yvette,

    France

    M. TOUCHON, Centre de Génétique Moleculaire, CNRS, 91198 Gif-sur-Yvette,

    France

    C. VAILLANT, Laboratoire Statistique et Génome, 91000 Evry, France

    CHRISTIAN VAN DEN BROECK, Hasselt University, Dept.WN1, B-3590 Diepenbeek,

    Belgium

    MARCEL VLAD, Department of Chemistry, Stanford University, Stanford,

    California 94305, USA; and Institute of Mathematical Statistics and

    Applied Mathematics, Casa Academiei Romane, 76100

    vi contributors to volume 135

  • INTRODUCTION

    Few of us can any longer keep up with the flood of scientific literature, evenin specialized subfields. Any attempt to do more and be broadly educatedwith respect to a large domain of science has the appearance of tilting atwindmills. Yet the synthesis of ideas drawn from different subjects into new,powerful, general concepts is as valuable as ever, and the desire to remaineducated persists in all scientists. This series, Advances in ChemicalPhysics, is devoted to helping the reader obtain general information about awide variety of topics in chemical physics, a field that we interpret verybroadly. Our intent is to have experts present comprehensive analyses ofsubjects of interest and to encourage the expression of individual points ofview. We hope that this approach to the presentation of an overview of asubject will both stimulate new research and serve as a personalized learningtext for beginners in a field.

    STUART A. RICE

    vii

  • ACKNOWLEDGMENTS

    The Symposium In Memoriam Ilya Prigogine on‘‘Time, Irreversibility andSelf-Organization’’ was held by the International Solvay Institutes forPhysics and Chemistry at the University of Brussels on December 2–3,2004.This Symposium was made possible by the sponsorships of the European

    Commission, of the Fonds National de la Recherche Scientifique (FNRS), ofthe Nationale Fonds voor Wetenschappelijk Onderzoek (NFWO), of theBelgian National Lottery, of the ‘‘Communauté Franaise de Belgique,’’ andof the ‘‘Hotel Métropole,’’ which are gratefully acknowledged.

    PROF. RENE LEFEVERUniversité Libre de Bruxelles Belgium

    ix

  • CONTENTS

    ILYA PRIGOGINE: HIS LIFE, HIS WORK 1

    By Radu Balescu

    TIME ASYMMETRY IN NONEQUILIBRIUM STATISTICAL MECHANICS 83

    By Pierre Gaspard

    QUANTUM AND CLASSICAL DYNAMICS OF NONINTEGRABLE SYSTEMS 135

    By Ilya Prigogine, Tomio Petrosky, and Gonzolo Ordonez

    STATISTICAL MECHANICS OF A GRAVITATIONAL PLASMA 153

    By Yves Pomeau

    INVERSE PROBLEMS FOR REACTION-DIFFUSION SYSTEMS

    WITH APPLICATION TO GEOGRAPHICAL POPULATION GENETICS 173

    By Marcel O. Vlad and John Ross

    CARNOT EFFICIENCY REVISITED 189

    By C. Van den Broeck

    DNA IN CHROMATIN: FROM GENOME-WIDE SEQUENCE ANALYSIS

    TO THE MODELING OF REPLICATION IN MAMMALS 203

    By A. Arneodo, B. Audit, E. B. Brodie of Brodie, S. Nicolay,

    P. St. Jean, Y. d’Aubenton-Carafa, C. Thermes, M. Touchon,

    and C. Vaillant

    BIOLOGICAL RHYTHMS AS TEMPORAL DISSIPATIVE STRUCTURES 253

    By Albert Goldbeter

    Author Index 297

    Subject Index 311

    xi

  • ILYA PRIGOGINE: HIS LIFE, HIS WORK*

    RADU BALESCU{

    Association Euratom—Belgian State for Fusion,

    Université Libre de Bruxelles, B-1050 Brussels, Belgium

    CONTENTS

    I. Ilya Prigogine’s Life and Work

    A. Introduction

    B. Short Biography

    C. Macroscopic Chemistry and Physics

    D. Microscopic Physics

    E. Cosmology

    F. Philosophical Vision

    G. Appendix

    1. Statistical Mechanics: First Version

    2. Projection Operators

    3. The Misra–Goldstein–Prigogine–Courbage (MPC, MGC) Formalism

    4. The Prigogine–Petrosky Formalism

    II. Systematic Bibliography

    A. Books

    1. Scientific Monographs

    2. General Books

    B. Articles

    1. Equilibrium Thermodynamics

    2. Theory of Solutions

    3. Nonequilibrium Thermodynamics: Linear Regime

    4. Nonlinear Thermodynamics and Complex Systems

    5. Vehicular Traffic

    6. Equilibrium Statistical Mechanics

    7. Mécanique Statistique de Non-équilibre, Systèmes Dynamiques

    8. Gravitation and Cosmology

    9. Varia

    10. Science Policy

    11. General Papers, Philosophy

    Special Volume in Memory of Ilya Prigogine: Advances in Chemical Physics, Volume 135,edited by Stuart A. RiceCopyright # 2007 John Wiley & Sons, Inc.

    *This chapter was originally published in the French language as ‘‘Ilya Prigogine, sa vie, sonoeuvre, Mémoire in-8�, Classe des Sciences, Académie Royale de Belgique, 2006.’’{Deceased, June 1, 2006

    1