swat4ls open phacts explorer demonstration

12
Ian Dunlop 1 , Rishi Ramgolam 2 , Stephen Pettifer 1 , Alasdair JG Gray 3 , James Eales 4 , Carole Goble 1 , Jan Velterop 2 1 University of Manchester (ian.dunlop, steve.pettifer, [email protected] ) 2 AQnowledge Ltd. (ramgolam, [email protected] ) 3 Heriot-Watt University ([email protected] ) 4 University of Leicester ([email protected]) Open PHACTS Explorer

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Open PHACTS Explorer demonstration and talk given at SWAT4LS, Edinburgh, 2013. The Explorer is an Ember JS MVC web application used to navigate the Open PHACTS Linked Data Cache without requiring any knowledge of RDF or SPARQL

TRANSCRIPT

Page 1: SWAT4LS Open PHACTS Explorer demonstration

Ian Dunlop1, Rishi Ramgolam2, Stephen Pettifer1, Alasdair JG Gray3, James Eales4, Carole Goble1, Jan Velterop2

1 University of Manchester (ian.dunlop, steve.pettifer, [email protected])2 AQnowledge Ltd. (ramgolam, [email protected])3 Heriot-Watt University ([email protected])4 University of Leicester ([email protected])

Open PHACTS Explorer

Page 2: SWAT4LS Open PHACTS Explorer demonstration

www.openphacts.org

Datasets

Page 3: SWAT4LS Open PHACTS Explorer demonstration

Architecture

OPS.js

Linked Data API

Linked Data CacheIdentity

Mapping Service

Identity Resolution

Service

Data DescriptionsDatasets

Explorer

Page 4: SWAT4LS Open PHACTS Explorer demonstration

Search

Page 5: SWAT4LS Open PHACTS Explorer demonstration

Compound Info

Page 6: SWAT4LS Open PHACTS Explorer demonstration

Compound Pharmacology

Page 7: SWAT4LS Open PHACTS Explorer demonstration

Compound Pathways

Page 8: SWAT4LS Open PHACTS Explorer demonstration

Pathway Info

Page 9: SWAT4LS Open PHACTS Explorer demonstration

Target Info

Page 10: SWAT4LS Open PHACTS Explorer demonstration

Target Pharmacology

Page 11: SWAT4LS Open PHACTS Explorer demonstration

Target Class Hierarchy

Page 12: SWAT4LS Open PHACTS Explorer demonstration

Ian Dunlop1, Rishi Ramgolam2, Stephen Pettifer1, Alasdair JG Gray3, James Eales4, Carole Goble1, Jan Velterop2

1 University of Manchester (ian.dunlop, steve.pettifer, [email protected])2 AQnowledge Ltd. (ramgolam, [email protected])3 Heriot-Watt University ([email protected])4 University of Leicester ([email protected])

Acknowledgements