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The top documents tagged [likely alignment]
Connection Between Alignment and HMMs. A state model for alignment -AGGCTATCACCTGACCTCCAGGCCGA--TGCCC--- TAG-CTATCAC--GACCGC-GGTCGATTTGCCCGACC IMMJMMMMMMMJJMMMMMMJMMMMMMMIIMMMMMIII
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Pairwise alignment 2: Scoring matrices and gaps BLAST, BLAT and FASTA
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