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Teaching Artificial Intelligence to Medical Students Yun Liu School of Basic Medical Sciences Fudan University, China Dec. 2 nd , 2019

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Page 1: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Teaching Artificial Intelligenceto Medical Students

Yun LiuSchool of Basic Medical Sciences

Fudan University, China

Dec. 2nd, 2019

Page 2: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Teaching AI to medical students – from the true experience

Why we taught AI in themedical school?

Outline

Embracing AI with an open mind

Page 3: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Why we taught AI in the medical school?01

Page 4: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

AI: the fourth industrial revolution

Page 5: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

How AI will transform healthcare

Page 6: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

AI is also transforming the biomedical research

IDx-DR

Page 7: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

1. Computing Power

Three factors for AI

Page 8: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Omics data

Medical images, EHR…

1. Computing Power

Three factors for AI

2. Big data

Portable medical devices

Page 9: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

1. Computing Power

Three factors for AI

2. Big data

3. Algorithms and Architecture

Page 10: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Omics data Medical images EHR

AI for precision medicine

Page 11: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Minh Doan, et al., Nature Materials, 2019

AI for precision medicine

Page 12: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Teaching AI to medical students – from the true experience02

Page 13: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Course Objects

Medical images, omicsdata, EHR, etc.

Basic theory of machine learning

Precision Medicine

We want the students with biological or medical background canunderstand the basic theory of machine learning, and learn how touse the tools to address their own problems in the medical fields.

Page 14: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Supervised analysisUnsupervised analysis……Linear regressionDeep learningNLP

ML Theory

Medical Environment

Medical Images

Omics data

EHR

Course Objects

Page 15: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Teaching Materials

First week: basic theory of artificial intelligence and machine learning:- linear algebra, probability theory, python, fastai- regression, SVM, survival analysis, random forest, deep learning, CNN

Page 16: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Invited experts to discuss the latest development in their fields

Teaching Materials

Second week: medical image classification, segmentation, EHR,feature selection in omics data, etc.

Page 17: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Human results

④ Prediction results

Model Training

③ Test dataset

① Training dataset

② Deep Learning

VS100%

Teaching Materials - Experiments

Page 18: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Optimized Teaching Materials for Medical Students

• Central cloud deployment (through collaboration with Huawei Cloud)

• Experimental protocols with detailed codes and annotations

Python: Jupyter Notebook

Language for deep learning: Fastai

• Teaching materials relatively easy for medical students with little coding backgrounds

Page 19: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Jupyter Notebook:

Optimized Teaching Materials for Medical Students

Page 20: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

MNIST dataset using Fastai

KerasPyTorch

Fastai

Codes for resnet50

Optimized Teaching Materials for Medical Students

Page 21: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Additional materials for advanced students

Additional online resources

Optimized Teaching Materials for Medical Students

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The Final Project

• Choose own questions (medical or research problems).• Encourage collaborations with people from different backgrounds.

Page 23: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

The Final Project

Page 24: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

The Final Project

Page 25: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

The Final Project

Page 26: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

The Final Project

Page 27: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Media Reports

Page 28: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Media Reports

Page 29: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

National Media Reports

Page 30: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Embracing AI with an open mind03

Page 31: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

A famous test

Whichquestion is

easy toanswer?

VS.

Who is this? Is this Obama?

Same for AI in healthcare

After machineanalyze the bigdata, then give

the doctor adiagnosis

suggestion.

Improve diagnostic efficiency

Embracing AI with an open mind

Page 32: Teaching Artificial Intelligence to Medical Students€¦ · understand the basic theory of machine learning, ... data. EHR. Course Objects. Teaching Materials. First week: basic

Acknowledgements

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Thanks!

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